Citrus Sinensis ID: 010015
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 520 | 2.2.26 [Sep-21-2011] | |||||||
| P40986 | 491 | Cell division control pro | yes | no | 0.636 | 0.674 | 0.298 | 1e-33 | |
| Q9UUH0 | 422 | Uncharacterized protein C | yes | no | 0.601 | 0.741 | 0.264 | 8e-31 | |
| D2I2M6 | 392 | Metallophosphoesterase 1 | yes | no | 0.640 | 0.849 | 0.261 | 1e-23 | |
| Q9VLR9 | 370 | Metallophosphoesterase 1 | yes | no | 0.621 | 0.872 | 0.254 | 2e-23 | |
| Q566Y9 | 381 | Metallophosphoesterase 1 | yes | no | 0.625 | 0.853 | 0.272 | 4e-23 | |
| Q5RET5 | 397 | Metallophosphoesterase 1 | yes | no | 0.648 | 0.848 | 0.264 | 2e-22 | |
| Q53F39 | 396 | Metallophosphoesterase 1 | yes | no | 0.688 | 0.904 | 0.261 | 3e-22 | |
| Q9GMS6 | 396 | Metallophosphoesterase 1 | N/A | no | 0.665 | 0.873 | 0.254 | 8e-22 | |
| C7G3A0 | 391 | Metallophosphoesterase 1 | yes | no | 0.575 | 0.764 | 0.266 | 2e-20 | |
| Q80XL7 | 396 | Metallophosphoesterase 1 | yes | no | 0.601 | 0.790 | 0.248 | 4e-20 |
| >sp|P40986|CDC1_YEAST Cell division control protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 173/369 (46%), Gaps = 38/369 (10%)
Query: 32 TLRSCTWPSSSSMDGVDGYD--KVAVIADPQIMDKTSLHLPPKSLALEVAQFFT----DL 85
++ C W S+ D +G + +V + ADPQIMD+ S P ++ +FT D
Sbjct: 69 AMKKCQW--STWEDWPEGAESHRVGLFADPQIMDEYSYPGRP-----QIVNYFTRVIVDH 121
Query: 86 YMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRV 145
Y RR + PD FLGD FDGG D++W + RF IF K R V
Sbjct: 122 YHRRNWKYVQYYLDPDSNFFLGDLFDGGRNWDDKQWIKEYTRFNQIFPKKPLRR----TV 177
Query: 146 HFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLA 205
LPGNHD G+ + ++R+ FG+ + G F+++D +L N++
Sbjct: 178 MSLPGNHDIGFGDTVVESS--LQRFSSYFGETSSSLDAGNHTFVLLDTISLSDKTNPNVS 235
Query: 206 AATWDFVKNVSIDFQLLPRVLLTHIPLYRRDE-TPCGPHRSSPIINQRIVRTGHSQEILY 264
F+ N ++ LPR+LLTH+PL+R E CG R S ++ GH + +
Sbjct: 236 RVPRQFLDNFAMGSHPLPRILLTHVPLWRDPEQQTCGQLRESK--EPFPIQKGHQYQTVI 293
Query: 265 QNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSH----ESNHEHIKEHTVGTISWQQGNL 320
+N I++E +L I+P ++ SG DHD C +SH + ++ +E TV + + G
Sbjct: 294 ENDISQE----ILTKIQPEILFSGDDHDHCQISHSYPFQGKTKNAQEITVKSCAMNMGIS 349
Query: 321 YPSFRLLSASNSALLNMSN-----LEEAVLTRLCFLP---MQTHIYIGYLLLFIVTLVTL 372
P+ +LLS N + L M N + T LC++P +Y+ LL + +
Sbjct: 350 RPAIQLLSLYNPSDLTMVNAGGEYASKTYQTELCYMPDPYKAIRMYLWGLLFSAAFIAYM 409
Query: 373 LFWPTGGVN 381
F+P N
Sbjct: 410 HFFPKSFNN 418
|
Probable metallophosphoesterase which may participate in recombinational repair of double -strand breaks. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|Q9UUH0|YKIC_SCHPO Uncharacterized protein C630.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC630.12 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 20/333 (6%)
Query: 34 RSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFA 93
+ C W S + ++A++ADPQ++D + P + + ++ +D ++RR +
Sbjct: 29 KKCDWRSWEQWESTGNPVRIALVADPQLVDDLTYDYPRPLIG--IVKWISDQFLRRHWRY 86
Query: 94 SILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD 153
KPD+ +GD D G + EE+++ R ++ K ++ + PGNHD
Sbjct: 87 LHKSLKPDITFIMGDLMDTGREFATEEFKKDYFRMMNVLDPKFTNK-----LEIYPGNHD 141
Query: 154 NGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK 213
G+ K ++R+E FG + VG ++VD L + + DF+K
Sbjct: 142 IGFGNHAIVKD--IQRFESLFGPTSRSIDVGNHTLVIVDGIRLSNNVNPQVYQPARDFLK 199
Query: 214 NVSIDF-QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEES 272
+ + PR+LL+H+PL+R CG R +++ G + YQN + E
Sbjct: 200 SFETNKDNSRPRILLSHVPLFRPAINSCGELRE----KDDVIKYGLGYQ--YQNLLLPEL 253
Query: 273 SNRLLDLIKPVLVLSGHDHDQCTVSH----ESNHEHIKEHTVGTISWQQGNLYPSFRLLS 328
S +L ++P+ +G DHD C V H ++ E+ V S G LYP ++LLS
Sbjct: 254 SESILKAVEPIAAFAGDDHDYCEVVHNYQVDTREAATTEYNVKAFSMTSGILYPGYQLLS 313
Query: 329 ASNSALLNMSNLEEAVLTRLCFLPMQTHIYIGY 361
+ ++ + + T+LC LP Q IY+ Y
Sbjct: 314 LNYPYDNPKADQKSSYQTKLCILPNQIQIYVWY 346
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|D2I2M6|MPPE1_AILME Metallophosphoesterase 1 OS=Ailuropoda melanoleuca GN=MPPE1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 178/394 (45%), Gaps = 61/394 (15%)
Query: 1 MMKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWP--SSSSMDGVDGYDKVAVIAD 58
++K+ L L L +L+ E + +++ R C WP + + D K +AD
Sbjct: 15 LLKRRSFLMLKLAALVFAVVLFCEFLIYYLVIFR-CDWPEVKTPASDSGQKTLKAMFLAD 73
Query: 59 PQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD 118
++ + H + + + M RAF ++ +P+V+ LGD FD G + S
Sbjct: 74 THLLGEVRGHW--------LDKLRREWQMERAFQTALRLLQPEVVFILGDIFDEGKWSSS 125
Query: 119 EEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRN 178
+ W + + RF+ IF R +++ + GNHD G+ ++ ++R+EK F
Sbjct: 126 QAWADDVERFQKIF-----RHPRHVQLKVVAGNHDIGFHYQMNAYK--IKRFEKVFSPER 178
Query: 179 YRFTVGKVEFIVVDAQTLDG---HPEGNLAAATWDFVKNVSI------------DFQLLP 223
F+ + F++V++ L+G H A + + ++ D QLLP
Sbjct: 179 L-FSWKGINFVMVNSVALEGDGCHICSEAEAELIEISRKLNCSRKQERRSGPCPDPQLLP 237
Query: 224 R---VLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI 280
VLL H PLYRR + C ++P + +R + ++L Q E+S +LL +
Sbjct: 238 ASAPVLLQHFPLYRRSDANCSGEDAAP-LEERGIPFKERYDVLSQ-----EASQQLLWWL 291
Query: 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNL 340
+P L+LSGH H C V H + + E +V + SW+ N PSF + S M+
Sbjct: 292 RPRLILSGHTHSACEVLHGAE---VPEISVPSFSWRNRN-NPSFIMGS--------MTPT 339
Query: 341 EEAVLTRLCFLPMQTHIYIGYL----LLFIVTLV 370
E A+ C+LP + + Y LL ++ LV
Sbjct: 340 EYALAK--CYLPYEDTVLATYCVAAGLLVVLILV 371
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Ailuropoda melanoleuca (taxid: 9646) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9VLR9|MPPE1_DROME Metallophosphoesterase 1 homolog OS=Drosophila melanogaster GN=CG8455 PE=2 SV=4 | Back alignment and function description |
|---|
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 177/385 (45%), Gaps = 62/385 (16%)
Query: 10 LFLCLTWTI-TLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLH 68
L+ C + L++ E VA ++ L+ C WP VD + ++ADP ++ H
Sbjct: 4 LYACFVIVLCALIFCEYVADFV-VLQKCKWPEIKRKKYVDDPLRAMILADPHLLGPHRGH 62
Query: 69 LPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128
+ + + + +M RAF A+ F+PDV+ LGD FD G +SD+++QE + R+
Sbjct: 63 W--------LDKLYREWHMTRAFQAASRLFQPDVVFVLGDLFDEGDMVSDKQFQEYVWRY 114
Query: 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYR-FTVGKVE 187
+F L I + + GNHD G+ + P + R+E + +T+ ++
Sbjct: 115 LKMFHLPP-----GIPLISVAGNHDVGFHYKM--HPFFMSRFESYLNNSSVNLYTIKQIH 167
Query: 188 FIVVDAQTLDGHPEGNL-AAATWDFVKNVSIDFQLLPR-----------------VLLTH 229
F+V+++ ++G +G + D +KN+S + +LL H
Sbjct: 168 FVVINSMAMEG--DGCMFCTQAEDQLKNISRTLYCMKYPLEAECARTRRHPYSQPILLQH 225
Query: 230 IPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGH 289
P YR +T C H +P I R + +++++++ L +L+KP L +GH
Sbjct: 226 FPTYRISDTMCEEH-DAPYIEAFRERF---------HVLSKDATDMLGELLKPRLAFAGH 275
Query: 290 DHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLC 349
H C H N I E+TV + SW + + PSF L + + ++ V+++
Sbjct: 276 SHHFC---HSVNRLGIDEYTVASFSW-RNKVNPSFMLATITP---------DDYVVSKCK 322
Query: 350 FLPMQTHIYIGYLLLFIVTLVTLLF 374
LP Q ++ YL I+ L+ + F
Sbjct: 323 MLP-QQFVFNSYLSAGILCLIVIGF 346
|
Metallophosphoesterase. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q566Y9|MPPE1_DANRE Metallophosphoesterase 1 OS=Danio rerio GN=mppe1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 174/392 (44%), Gaps = 67/392 (17%)
Query: 7 KLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTS 66
+L + L + ++ E V +++ LR C+WP D + ++D ++
Sbjct: 10 RLAVTLIFAFVSVFVFCEYVIYYLVILR-CSWPLLEIEDSHSPL-RALFLSDTHLLGAIR 67
Query: 67 LHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126
H K + M RAF S+ P+V+ LGD FD G + + ++W++ +
Sbjct: 68 GHWLDK--------LRREWQMERAFQTSMWLLNPEVVFILGDVFDEGKWSTSQDWEDDVR 119
Query: 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYR-FTVGK 185
RFK IF D ++ L GNHD G+ ++ + + R+E+ F + R T+
Sbjct: 120 RFKRIFRHPV-----DTKLVVLVGNHDIGFHHEMTKQK--LERFEQVFNVTSARILTIKG 172
Query: 186 VEFIVVDAQTLDG-------HPEGNLAAATWDFVKNVSID-------------FQLLPRV 225
V F++V++ L G H E L + N SI F V
Sbjct: 173 VNFLLVNSVALHGDHCPICQHVEEELQKLS--HALNCSIQGAQHNGQCKNAARFAPAAPV 230
Query: 226 LLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQ---NYITEESSNRLLDLIKP 282
LL H PLYR + C ++P+ Q +L+Q + I++ +S +LL KP
Sbjct: 231 LLQHYPLYRVSDAMCTGVDTAPL---------DEQYLLFQERYDVISKNASKKLLWWFKP 281
Query: 283 VLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEE 342
L+LSGH H+ C V HE + I +V + SW+ N PSF L + S S E
Sbjct: 282 RLILSGHTHNGCEVLHEKLYPEI---SVPSFSWRNRN-NPSFVLGTFSQS---------E 328
Query: 343 AVLTRLCFLPMQTHIYIGYL-LLFIVTLVTLL 373
L++ CFLP + + + Y I+ L+TL+
Sbjct: 329 FQLSK-CFLPEERTVLVVYCSSCLIIALITLI 359
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q5RET5|MPPE1_PONAB Metallophosphoesterase 1 OS=Pongo abelii GN=MPPE1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 181/412 (43%), Gaps = 75/412 (18%)
Query: 19 TLLYGEMVAFWIPTLRSCTWPS--SSSMDGVDGYD----KVAVIADPQIMDKTSLHLPPK 72
LL+ E + +++ + C WP +++ DG K +AD ++ + H P K
Sbjct: 33 VLLFCEFLIYYLAIFQ-CNWPEVKTTASDGEQATREPVLKAMFLADTHLLGEVLGHWPDK 91
Query: 73 SLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIF 132
+ M RAF ++ +P+V+ LGD FD G + + E W + RF+ +F
Sbjct: 92 --------LRREWQMERAFQTALWLLQPEVVFILGDIFDEGKWSTPEAWVNDVERFQKMF 143
Query: 133 GLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVD 192
S +++ + GNHD G+ ++ V R+EK F F+ + F++V+
Sbjct: 144 RHPSH-----VQLKVVAGNHDIGFHYEMNTYK--VERFEKVFSSERL-FSWKGINFVMVN 195
Query: 193 AQTLDGHPEGNLAAATWDFVK-----NVSIDFQ----------LLPR---VLLTHIPLYR 234
+ L+G G + + ++ N S + LLP VLL H PLYR
Sbjct: 196 SVALNGDGCGICSETEAELIEVSHRLNCSREQARGSSRCGPGPLLPMSAPVLLQHYPLYR 255
Query: 235 RDETPCGPHRSSPIINQRIVRTGHSQEILYQNY--ITEESSNRLLDLIKPVLVLSGHDHD 292
R + C ++P + I +NY ++ E+S +LL +P LVLSGH H
Sbjct: 256 RSDANCSGEDAAPPEERDIP--------FKENYDVLSREASQKLLRWFQPRLVLSGHTHS 307
Query: 293 QCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLP 352
C V H + E +V + SW+ N PSF + S + + + L++ C+LP
Sbjct: 308 ACEVHHGGR---VPELSVPSFSWRNRN-NPSFIMGSITPT---------DYTLSK-CYLP 353
Query: 353 MQTHIYIGY--LLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQLFKVGTK 402
+ + I Y ++ F+V L +FG S FLA L K T+
Sbjct: 354 REDVVLIIYCGMVGFLVVLTL--------THFGLLASPFLAGLNLLRKRKTR 397
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q53F39|MPPE1_HUMAN Metallophosphoesterase 1 OS=Homo sapiens GN=MPPE1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 190/424 (44%), Gaps = 66/424 (15%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPS--SSSMDGVDGYDKVAVIADP 59
+K+ L L L LL+ E + +++ + C WP +++ DG + + A
Sbjct: 16 LKRKSSLLLKLIAVVFAVLLFCEFLIYYLAIFQ-CNWPEVKTTASDGEQTTREPVLKA-- 72
Query: 60 QIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDE 119
M HL + L + + + M RAF ++ +P+V+ LGD FD G + + E
Sbjct: 73 --MFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDIFDEGKWSTPE 130
Query: 120 EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNY 179
W + + RF+ +F S +++ + GNHD G+ ++ V R+EK F
Sbjct: 131 AWADDVERFQKMFRHPSH-----VQLKVVAGNHDIGFHYEMNTYK--VERFEKVFSSERL 183
Query: 180 RFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK-----NVSIDFQ---------LLPR- 224
F+ + F++V++ L+G G + + ++ N S + + LLP
Sbjct: 184 -FSWKGINFVMVNSVALNGDGCGICSETEAELIEVSHRLNCSREARGSSRCGPGPLLPTS 242
Query: 225 --VLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNY--ITEESSNRLLDLI 280
VLL H PLYRR + C ++P + I +NY ++ E+S +LL +
Sbjct: 243 APVLLQHYPLYRRSDANCSGEDAAPAEERDIP--------FKENYDVLSREASQKLLWWL 294
Query: 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNL 340
+P LVLSGH H C V H + E +V + SW+ N PSF + S + +
Sbjct: 295 QPRLVLSGHTHSACEVHHGGR---VPELSVPSFSWRNRN-NPSFIMGSITPT-------- 342
Query: 341 EEAVLTRLCFLPMQTHIYIGY--LLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQLFK 398
+ L++ C+LP + + I Y ++ F+V L +FG S FL+ L K
Sbjct: 343 -DYTLSK-CYLPREDVVLIIYCGVVGFLVVLTL--------THFGLLASPFLSGLNLLGK 392
Query: 399 VGTK 402
T+
Sbjct: 393 RKTR 396
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q9GMS6|MPPE1_MACFA Metallophosphoesterase 1 OS=Macaca fascicularis GN=MPPE1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 184/409 (44%), Gaps = 63/409 (15%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADP-- 59
+K+ L L L LL+ E + +++ + C WP + YD +P
Sbjct: 16 LKRKSALLLKLIAVVFAVLLFCEFLIYYLAIFQ-CNWPEVKTT----AYDGEQASHEPVL 70
Query: 60 QIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDE 119
+ M HL + L + + + M RA ++ +P+V+ LGD FD G + + E
Sbjct: 71 KAMFLADTHLLGEFLGHWLDKLRREWQMERALQTALWLLQPEVVFILGDVFDEGKWSTPE 130
Query: 120 EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNY 179
W + + RF+ +F S +++ + GNHD G+ ++ V R+EK F
Sbjct: 131 AWADDVERFQKMFRHPSH-----VQLKVVAGNHDIGFHYEMNTYK--VERFEKVFSSERL 183
Query: 180 RFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK-----NVSIDFQ---------LLP-- 223
F+ + F++V++ ++G G + A + ++ N S + + LLP
Sbjct: 184 -FSWKGINFVMVNSVAMNGDGCGICSEAEAELIEVSHRLNCSREARGSRRCGPGPLLPVS 242
Query: 224 -RVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNY--ITEESSNRLLDLI 280
VLL H PLYRR + C ++P + I +NY ++ E+S +LL +
Sbjct: 243 APVLLQHYPLYRRSDANCSGDDAAPPEERDIP--------FKENYDVLSREASQKLLWWL 294
Query: 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNL 340
+P LVLSGH H C V H + E +V + SW+ N PSF + S + +
Sbjct: 295 QPRLVLSGHTHSACEVHHGGR---VPEFSVPSFSWRNRN-NPSFIMGSITPT-------- 342
Query: 341 EEAVLTRLCFLPMQTHIY------IGYLLLFIVTLVTLLFWP-TGGVNF 382
+ L++ C+LP + + +G+L++ ++ + LL P G+N
Sbjct: 343 -DYALSK-CYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNL 389
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Macaca fascicularis (taxid: 9541) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|C7G3A0|MPPE1_CRIGR Metallophosphoesterase 1 OS=Cricetulus griseus GN=MPPE1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 58/357 (16%)
Query: 36 CTWPSSSSMDGVDGYD---KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFF 92
C WP ++ D K +AD ++ + H K + M RAF
Sbjct: 47 CHWPEVKTLAHGDRQKPVLKAMFLADTHLLGEIRGHWLDK--------LRREWQMERAFQ 98
Query: 93 ASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNH 152
++ +P+VI LGD FD G + + E W + + RF+ IF S +++ + GNH
Sbjct: 99 TALWWLQPEVIFILGDIFDEGKWSTTEAWADDVQRFRKIFRHGSH-----VQLKVVIGNH 153
Query: 153 DNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFV 212
D G+ +S ++R+EK F F+ V F++V++ ++G + A +
Sbjct: 154 DIGFHYQMSKYR--IKRFEKVFSSERL-FSWKGVNFVMVNSVAMEGDGCSICSEAEAELR 210
Query: 213 K-----NVSIDF---------QLLP---RVLLTHIPLYRRDETPCGPHRSSPIINQRIVR 255
+ N S + Q LP VLL H PLYR + C ++P +R V
Sbjct: 211 EISRKLNCSREVQGSSQCEGEQRLPFSAPVLLQHYPLYRASDANCSGEDAAP-PEERNVP 269
Query: 256 TGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISW 315
++L + E+S +LL ++P LVLSGH H C V H + E +V + SW
Sbjct: 270 FEEKYDVL-----SREASQKLLWWLQPRLVLSGHTHSACEVLHPGG---VPEVSVPSFSW 321
Query: 316 QQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIYIGY--LLLFIVTLV 370
+ N PSF + S ++ ++ L++ C+LP + + Y +F+V L+
Sbjct: 322 RNRN-NPSFIMGSLTS---------KDYALSK-CYLPFEDRVLATYGAAAVFLVVLI 367
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Cricetulus griseus (taxid: 10029) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q80XL7|MPPE1_MOUSE Metallophosphoesterase 1 OS=Mus musculus GN=Mppe1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 167/378 (44%), Gaps = 65/378 (17%)
Query: 19 TLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYD---KVAVIADPQIMDKTSLHLPPKSLA 75
LL+ E +++ R C WP ++ + K +AD ++ + H
Sbjct: 34 VLLFCEYFIYYLVLFR-CHWPEVKTLAHGGRQEPVLKAMFLADTHLLGEIRGHW------ 86
Query: 76 LEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLK 135
+ + + M RAF ++ +P+V+ LGD FD G + SD+ W + + RF+ +F
Sbjct: 87 --LDKLRREWQMERAFQTALWLLQPEVVFILGDIFDEGKWSSDQAWADDVQRFQRMFRHD 144
Query: 136 SQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQT 195
S +++ + GNHD G+ +S ++R+EK FG ++ V F++V++
Sbjct: 145 SH-----VQLKVVIGNHDVGFHYQMSKYR--IKRFEKVFGSERL-LSLKGVNFVMVNSVA 196
Query: 196 LDG-------HPEGNLAA------ATWDFVKNVSIDFQLLPR------VLLTHIPLYRRD 236
++G E L + + + D + PR VLL H PLYR
Sbjct: 197 MEGDGCIICSEEEAELREISRKLNCSQEVPGSSQCDREPEPRLPLSAPVLLQHYPLYRAS 256
Query: 237 ETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTV 296
+ C ++P +R V ++L + E+S +LL ++P LVLSGH H C V
Sbjct: 257 DANCSGEDAAP-PEERNVPFEEKYDVL-----SREASQKLLWWLRPRLVLSGHTHSACEV 310
Query: 297 SHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTH 356
H E +V + SW+ N PSF + S ++ + L++ C+LP +
Sbjct: 311 LHPGG---APEVSVPSFSWRNRN-NPSFIMGSLTS---------RDYALSK-CYLPFEDT 356
Query: 357 IYI------GYLLLFIVT 368
+ G+L++ I+
Sbjct: 357 VLTMYGAAAGFLMILILV 374
|
Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 520 | ||||||
| 255569235 | 530 | Cell division control protein, putative | 0.996 | 0.977 | 0.674 | 0.0 | |
| 225431631 | 536 | PREDICTED: uncharacterized protein C630. | 0.982 | 0.953 | 0.644 | 0.0 | |
| 359477072 | 531 | PREDICTED: uncharacterized protein C630. | 0.978 | 0.958 | 0.639 | 0.0 | |
| 356522456 | 542 | PREDICTED: uncharacterized protein C630. | 0.969 | 0.929 | 0.620 | 0.0 | |
| 356559341 | 543 | PREDICTED: uncharacterized protein C630. | 0.957 | 0.917 | 0.611 | 0.0 | |
| 357514393 | 537 | Serine/threonine phosphatase-like protei | 0.994 | 0.962 | 0.589 | 0.0 | |
| 79365227 | 528 | hydrolase/ protein serine/threonine phos | 0.988 | 0.973 | 0.562 | 1e-178 | |
| 297853154 | 531 | protein serine/threonine phosphatase [Ar | 0.988 | 0.967 | 0.557 | 1e-177 | |
| 145325421 | 448 | hydrolase/ protein serine/threonine phos | 0.838 | 0.973 | 0.591 | 1e-155 | |
| 115453399 | 529 | Os03g0397300 [Oryza sativa Japonica Grou | 0.953 | 0.937 | 0.535 | 1e-144 |
| >gi|255569235|ref|XP_002525586.1| Cell division control protein, putative [Ricinus communis] gi|223535165|gb|EEF36845.1| Cell division control protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/531 (67%), Positives = 429/531 (80%), Gaps = 13/531 (2%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWP------SSSSMDGVDGYDKVAV 55
MKQHHKLT+ LC W TLLYGEM +FW+P+L SC+WP S+S+++GV Y KVAV
Sbjct: 1 MKQHHKLTVALCGIWAATLLYGEMFSFWVPSLWSCSWPHLQSLSSNSTINGVGNYVKVAV 60
Query: 56 IADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY 115
IADPQIMD+TS HLPPKS ALE AQF+TDLYMRRAF SILPFKPDVILFLGD+FDGGP+
Sbjct: 61 IADPQIMDRTSHHLPPKSFALETAQFYTDLYMRRAFLLSILPFKPDVILFLGDYFDGGPH 120
Query: 116 LSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG 175
LSD+EWQESL R++HIF + S+ R+ D +V+ +PGNHD GYA+L SHKPE+VRRY + FG
Sbjct: 121 LSDQEWQESLQRYRHIFAMNSEGRYSDFQVYSIPGNHDIGYASLNSHKPEVVRRYVEGFG 180
Query: 176 KRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRR 235
RN++FTVGKVEFI VDAQTLDG P+GNLA+ TW+FVKNVS D QL PRVLLTHIPLYRR
Sbjct: 181 IRNFQFTVGKVEFIAVDAQTLDGDPQGNLASMTWEFVKNVSKDIQLAPRVLLTHIPLYRR 240
Query: 236 DETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCT 295
D T CG HRSSPIINQRI R+ HSQEI YQN++TEESSN+LL+L+KP L+LSGHDHDQCT
Sbjct: 241 DNTDCGSHRSSPIINQRISRSAHSQEITYQNFVTEESSNKLLELLKPALILSGHDHDQCT 300
Query: 296 VSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQT 355
V+HESN IKEH+VGTISWQQGNLYPSF LLS SNSA N S E+A++++LCFLPMQT
Sbjct: 301 VTHESNSIPIKEHSVGTISWQQGNLYPSFMLLSVSNSAQANRSAAEDALISQLCFLPMQT 360
Query: 356 HIYIGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGK---QLFKVGTKEKTEDENCEY 412
HIYI Y+ L+I+TL+TLLFWP G++F + S + + + +FK GTKEK EDEN EY
Sbjct: 361 HIYIWYISLYILTLLTLLFWPASGISFERYLSGLMGYIRLYSSMFKGGTKEKNEDENFEY 420
Query: 413 EMVWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD--- 469
E +WDAEG+MHLV+K NTP + D + ++ RGNAVMR TA+K +QE+EIS+N+D
Sbjct: 421 EEMWDAEGTMHLVKKPVNTPTSCHGDKA-SVGRGNAVMRPTARKNISQEMEISVNIDGNT 479
Query: 470 DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
DP L RTSKS K II RL+R FRM+ VIA +NIP+YMMLLFKDWIDQ
Sbjct: 480 DPNIKLAHRTSKSKTKIIIRRLMRTFRMVVVIAAINIPIYMMLLFKDWIDQ 530
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431631|ref|XP_002262863.1| PREDICTED: uncharacterized protein C630.12-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/535 (64%), Positives = 418/535 (78%), Gaps = 24/535 (4%)
Query: 8 LTLFLCLTWTITLLYGEMVAFWIPTLRSCTWP--------SSSSMDGV--DGYDKVAVIA 57
LT+ LC+ W ++LLYGEM+ FW+P++ SC+WP SSS+M+ Y K+AV+A
Sbjct: 4 LTMLLCILWVVSLLYGEMLTFWVPSIWSCSWPPLLRSTSLSSSAMEAQHPGNYVKIAVVA 63
Query: 58 DPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLS 117
DPQ+MDKTSL LPPKSLALE++QF+TDL+MRRAF ASILP KPD ILFLGD+FDGGP LS
Sbjct: 64 DPQLMDKTSLGLPPKSLALEISQFYTDLFMRRAFLASILPLKPDAILFLGDYFDGGPSLS 123
Query: 118 DEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKR 177
DEEW+ES +RFKHIF LK+Q + R+I+V+ L GNHD GYA++LSHKPE+VRRYE+EFG R
Sbjct: 124 DEEWKESSSRFKHIFDLKTQGK-RNIQVYHLSGNHDIGYASVLSHKPEVVRRYEQEFGIR 182
Query: 178 NYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDE 237
NYRFTVGKVEF+VVDAQTLDGH +G+L +A+WDF+KNVS+D L PRVLLTHIPLYR D
Sbjct: 183 NYRFTVGKVEFVVVDAQTLDGHSQGSLTSASWDFIKNVSMDVNLNPRVLLTHIPLYRPDW 242
Query: 238 TPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVS 297
T CGP+R SP+INQR+ R H QEI+YQNYITEE S LLDL++PVL+LSGHDHDQCTV+
Sbjct: 243 TTCGPYRYSPVINQRVFRAIHDQEIVYQNYITEEKSKYLLDLLRPVLILSGHDHDQCTVT 302
Query: 298 HESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHI 357
H S H + EHTVGTISWQQGNLYPSF LLSASN + N S+L++A+ T+LCFLPMQTHI
Sbjct: 303 HMSKHGPVMEHTVGTISWQQGNLYPSFMLLSASNDTIQNDSSLQDAISTQLCFLPMQTHI 362
Query: 358 YIGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQL-----FKVGTKEKTEDENCEY 412
YI YL F++TL+ LL WPT G+ HC F+ + + L + G KEK EDENCEY
Sbjct: 363 YIWYLFQFVLTLLALLLWPTNGLGSWRHCRVFMEYTRSLISSNILRSGAKEKNEDENCEY 422
Query: 413 EMVWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD--- 469
EM+WDAEGSMHLV+K + P+TR+ + G ERGNAVMR TAK+ +QE E+S VD
Sbjct: 423 EMIWDAEGSMHLVKKTSKAPLTRSSE-RGLSERGNAVMRSTAKRQISQETELSTAVDMNM 481
Query: 470 ----DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
D M LPPR SKS K +I RL+R RMLTVIA VN+PLYMMLLFKDW +Q
Sbjct: 482 DVELDMMAKLPPRASKSRTKKVIRRLMRTLRMLTVIAAVNVPLYMMLLFKDWTEQ 536
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477072|ref|XP_003631934.1| PREDICTED: uncharacterized protein C630.12-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/533 (63%), Positives = 413/533 (77%), Gaps = 24/533 (4%)
Query: 10 LFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDG------VDG----YDKVAVIADP 59
+ LC+ W ++LLYGEM+ FW+P++ SC+WP V+G Y K+AV+ADP
Sbjct: 1 MLLCILWVVSLLYGEMLTFWVPSIWSCSWPPLLRSTSLSSSVIVNGHGSNYVKIAVVADP 60
Query: 60 QIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDE 119
Q+MDKTSL LPPKSLALE++QF+TDL+MRRAF ASILP KPD ILFLGD+FDGGP LSDE
Sbjct: 61 QLMDKTSLGLPPKSLALEISQFYTDLFMRRAFLASILPLKPDAILFLGDYFDGGPSLSDE 120
Query: 120 EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNY 179
EW+ES +RFKHIF LK+Q + R+I+V+ L GNHD GYA++LSHKPE+VRRYE+EFG RNY
Sbjct: 121 EWKESSSRFKHIFDLKTQGK-RNIQVYHLSGNHDIGYASVLSHKPEVVRRYEQEFGIRNY 179
Query: 180 RFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETP 239
RFTVGKVEF+VVDAQTLDGH +G+L +A+WDF+KNVS+D L PRVLLTHIPLYR D T
Sbjct: 180 RFTVGKVEFVVVDAQTLDGHSQGSLTSASWDFIKNVSMDVNLNPRVLLTHIPLYRPDWTT 239
Query: 240 CGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHE 299
CGP+R SP+INQR+ R H QEI+YQNYITEE S LLDL++PVL+LSGHDHDQCTV+H
Sbjct: 240 CGPYRYSPVINQRVFRAIHDQEIVYQNYITEEKSKYLLDLLRPVLILSGHDHDQCTVTHM 299
Query: 300 SNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIYI 359
S H + EHTVGTISWQQGNLYPSF LLSASN + N S+L++A+ T+LCFLPMQTHIYI
Sbjct: 300 SKHGPVMEHTVGTISWQQGNLYPSFMLLSASNDTIQNDSSLQDAISTQLCFLPMQTHIYI 359
Query: 360 GYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQL-----FKVGTKEKTEDENCEYEM 414
YL F++TL+ LL WPT G+ HC F+ + + L + G KEK EDENCEYEM
Sbjct: 360 WYLFQFVLTLLALLLWPTNGLGSWRHCRVFMEYTRSLISSNILRSGAKEKNEDENCEYEM 419
Query: 415 VWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD----- 469
+WDAEGSMHLV+K + P+TR+ + G ERGNAVMR TAK+ +QE E+S VD
Sbjct: 420 IWDAEGSMHLVKKTSKAPLTRSSE-RGLSERGNAVMRSTAKRQISQETELSTAVDMNMDV 478
Query: 470 --DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
D M LPPR SKS K +I RL+R RMLTVIA VN+PLYMMLLFKDW +Q
Sbjct: 479 ELDMMAKLPPRASKSRTKKVIRRLMRTLRMLTVIAAVNVPLYMMLLFKDWTEQ 531
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522456|ref|XP_003529862.1| PREDICTED: uncharacterized protein C630.12-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/530 (62%), Positives = 396/530 (74%), Gaps = 26/530 (4%)
Query: 16 WTITLLYGEMVAFWIPTLRSCTWP-----SSSSMDGVDG------YDKVAVIADPQIMDK 64
W +TLLYGEM A+W+P + +C+WP SSSSM D Y KVAVIADPQ+MDK
Sbjct: 14 WALTLLYGEMFAYWVPPIFTCSWPHLLRTSSSSMVETDSGNYQADYVKVAVIADPQLMDK 73
Query: 65 TSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQES 124
TSL LP KSLALE+ +F+TDL MRR+F AS+LPFKPDVIL LGD+FDGGPYLSDEEWQES
Sbjct: 74 TSLRLPAKSLALELVEFYTDLNMRRSFVASVLPFKPDVILLLGDYFDGGPYLSDEEWQES 133
Query: 125 LNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVG 184
NRF+HIFGL +Q ++ D+ V+++PGNHD GY +L S KPE++RRYE+ FG RNYRFTVG
Sbjct: 134 FNRFRHIFGLNAQGKYTDMPVYYIPGNHDIGYESLHSLKPEVIRRYEETFGIRNYRFTVG 193
Query: 185 KVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHR 244
KV+FI VDAQTLDGHP+ L + TWDFVKN+S D + PRVLLTHIPLYRRD+T CGP R
Sbjct: 194 KVDFIAVDAQTLDGHPQNLLTSQTWDFVKNISADDVVHPRVLLTHIPLYRRDDTYCGPDR 253
Query: 245 SSPIINQRIVRT--GHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNH 302
SSPIINQRI + G++ +I YQNY++E+SS LLD IKP L+LSGHDHDQCTVSH+S
Sbjct: 254 SSPIINQRIRHSLNGNTNDISYQNYVSEKSSKYLLDTIKPKLILSGHDHDQCTVSHQSKS 313
Query: 303 EHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIYIGYL 362
+ EHT+GTISWQQGNLYPSF LLS NS N S +EA+LT LC+LPMQTHIYI Y+
Sbjct: 314 GPVNEHTLGTISWQQGNLYPSFMLLSVDNSTHPNASIPKEALLTHLCYLPMQTHIYIWYI 373
Query: 363 LLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQLF-----KVGTKEKTEDENCEYEMVWD 417
+LFI+TL+ LFWPT G +F C + KQL + TKEK ED N EYEM+WD
Sbjct: 374 VLFILTLLAALFWPTSGTSFWHQCCGLFGYCKQLIACIFSRSETKEKDEDANYEYEMMWD 433
Query: 418 AEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD-------D 470
AEG+MHLV+K N + D S ERG VMR A+K AQE ++S+NVD D
Sbjct: 434 AEGTMHLVKKTLNASTVNSNDQS-LGERGYVVMRAAARKNTAQEGDLSVNVDMASGIGLD 492
Query: 471 PMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
P+ +PPRT KS K I+ RL+R RMLTVI+ VN+PLYMMLLFKDWID+
Sbjct: 493 PVAKMPPRTGKSKTKIIVQRLIRTLRMLTVISAVNVPLYMMLLFKDWIDK 542
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559341|ref|XP_003547958.1| PREDICTED: uncharacterized protein C630.12-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/525 (61%), Positives = 392/525 (74%), Gaps = 27/525 (5%)
Query: 22 YGEMVAFWIPTLRSCTWP----------SSSSMDG--VDGYDKVAVIADPQIMDKTSLHL 69
YGEM A+W+P L +C+WP S+ +++G Y KVAVIADPQ+MDKTSL L
Sbjct: 20 YGEMFAYWVPPLFTCSWPHLLRSSSSSSSTVTINGNYQGDYVKVAVIADPQLMDKTSLRL 79
Query: 70 PPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129
P +SLALE+A+F+TDL MRR+FFAS+LPFKPDVILFLGD+FDGGP LSDEEWQES +R K
Sbjct: 80 PARSLALELAEFYTDLNMRRSFFASVLPFKPDVILFLGDYFDGGPSLSDEEWQESFSRLK 139
Query: 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFI 189
HIFGL +Q ++RD+ V+++PGNHD GY +L S KPE+++RYE+ FG RNY+FTVGKV+FI
Sbjct: 140 HIFGLNAQGKYRDMPVYYIPGNHDIGYESLHSLKPEVIQRYEEAFGTRNYKFTVGKVDFI 199
Query: 190 VVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPII 249
VDAQTLDGHP+ +L + TWDFVKN+S+ + PRVLL+HIPLYRRD+T CGPHRSSPII
Sbjct: 200 AVDAQTLDGHPQNHLTSQTWDFVKNISVGDVVHPRVLLSHIPLYRRDDTYCGPHRSSPII 259
Query: 250 NQRI--VRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKE 307
NQRI G++ EI YQNY++E+SS LLD IKP L+LSGHDHD CTV+H+S + E
Sbjct: 260 NQRIHHAINGNTNEISYQNYVSEKSSKYLLDTIKPKLILSGHDHDLCTVTHQSKSGSVNE 319
Query: 308 HTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIYIGYLLLFIV 367
HT+GTISWQQGNLYPSF LLS NS L S EEA+LT LC+LPMQTHIYI Y++LFI+
Sbjct: 320 HTLGTISWQQGNLYPSFMLLSVDNSTLQKASIPEEALLTHLCYLPMQTHIYIWYIVLFIL 379
Query: 368 TLVTLLFWPTGGVNFGCHCSDFLAHGKQLF-----KVGTKEKTEDENCEYEMVWDAEGSM 422
TL+ LFWPT G + C + + KQL + TKEK ED N EYEM+WDAEG+M
Sbjct: 380 TLLATLFWPTSGTSLWHQCCGLVGYCKQLIACTFSRSETKEKDEDANYEYEMMWDAEGTM 439
Query: 423 HLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD-------DPMTNL 475
HLV+K N P T + G ERGN VMR A+K QE + S+NVD DP+ +
Sbjct: 440 HLVKKPLN-PSTVNSNDRGLGERGNVVMRAAARKNTPQEGDHSVNVDIASGIGVDPVARM 498
Query: 476 PPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
P RT KS K II RL+R RMLTVIA VN+PLYMMLLFKDWID+
Sbjct: 499 PLRTGKSKTKIIIQRLIRTLRMLTVIAAVNVPLYMMLLFKDWIDK 543
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357514393|ref|XP_003627485.1| Serine/threonine phosphatase-like protein [Medicago truncatula] gi|355521507|gb|AET01961.1| Serine/threonine phosphatase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/539 (58%), Positives = 392/539 (72%), Gaps = 22/539 (4%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWP----SSSSMDGVDGYDKVAVIA 57
MKQ +LT LCL W +TLLYGEM ++W+P L +C+WP + S + Y KVA+IA
Sbjct: 1 MKQQ-ELTFLLCLIWALTLLYGEMFSYWLPPLFTCSWPHLMVQTKSENHQTDYVKVAIIA 59
Query: 58 DPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLS 117
DPQ+MDKTSLHLP KSLALE+ +F+TDL M+R+FF+SILPFKPDVILFLGD+FDGGPYLS
Sbjct: 60 DPQLMDKTSLHLPEKSLALEIVKFYTDLNMQRSFFSSILPFKPDVILFLGDYFDGGPYLS 119
Query: 118 DEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKR 177
DEEW+ESLNR K IFGL +Q ++ D V+++PGNHD GY +L P+++RRYE+ FG R
Sbjct: 120 DEEWKESLNRLKRIFGLNAQGKYTDKPVYYIPGNHDIGYESLHYAMPKVIRRYEETFGIR 179
Query: 178 NYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDE 237
NY+F VGKV+FI VD+QTLDGHP+ +LA+ TW+FVKN+S+D + PRVLLTHIPLYR D
Sbjct: 180 NYKFAVGKVDFIAVDSQTLDGHPQKHLASQTWEFVKNISVDDVVRPRVLLTHIPLYRPDG 239
Query: 238 TPCGPHRSSPIINQRIVRTGHSQE--ILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCT 295
T CGP R+SPIINQRI H + I YQNY+ E+SS LLD IKP L+LSGHDHDQCT
Sbjct: 240 TYCGPDRTSPIINQRIHHAWHDKTNGITYQNYVFEKSSKSLLDTIKPKLILSGHDHDQCT 299
Query: 296 VSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNL--EEAVLTRLCFLPM 353
++H+S IKEHT+GTISWQQGNLYPSF LLS NS L N S EE +LT LC+LP
Sbjct: 300 ITHQSKSGPIKEHTLGTISWQQGNLYPSFMLLSVVNSTLPNASASIPEEPLLTHLCYLPK 359
Query: 354 QTHIYIGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAHGKQLF-----KVGTKEKTEDE 408
Q HIY+ Y++ F+ TL+ LL WPT +F C + + + KQL K TKEK ED
Sbjct: 360 QFHIYMWYIVQFVFTLLALLLWPTSNTSFWHQCWNLVGNFKQLIASIVSKNETKEKDEDA 419
Query: 409 NCEYEMVWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNV 468
N EYEM+WDAEGSMHL++K + + S ERGN V+R TA+K QE S+N+
Sbjct: 420 NYEYEMMWDAEGSMHLIKKPLKASTVNSNERS-LGERGNVVLRPTARKNTGQEAAFSVNM 478
Query: 469 D-------DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
D DP+ +PPRT KS II RL+R RMLTVIA VN+PLYMMLLFKDWID+
Sbjct: 479 DMASTIELDPLAKIPPRTGKSKTTIIIQRLLRTLRMLTVIAAVNVPLYMMLLFKDWIDK 537
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79365227|ref|NP_175775.2| hydrolase/ protein serine/threonine phosphatase [Arabidopsis thaliana] gi|332194866|gb|AEE32987.1| hydrolase/ protein serine/threonine phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/532 (56%), Positives = 388/532 (72%), Gaps = 18/532 (3%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDG---YDKVAVIAD 58
MK HHKLT+ LCL W T+LYGEM AFW+P+L +C+WP S DGV+ + KVA++ D
Sbjct: 1 MKHHHKLTVALCLIWAATILYGEMFAFWVPSLFTCSWPHHKS-DGVESDGNFTKVAIVTD 59
Query: 59 PQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD 118
PQ+MDKTS L K+LALE+AQF+TD+ MRR+FF S+LPFKPDV+LFLGD+FDGGP+LS+
Sbjct: 60 PQLMDKTSFRLSSKTLALELAQFYTDINMRRSFFRSVLPFKPDVVLFLGDYFDGGPFLSE 119
Query: 119 EEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRN 178
EEWQESLNR KH+FGL S+ R DI ++PGNHD GY+ + SHK ++ RYEK FG RN
Sbjct: 120 EEWQESLNRLKHVFGLNSEGRVGDIPTFYIPGNHDIGYSRVASHKQGVIDRYEKVFGVRN 179
Query: 179 YRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDET 238
RF +G VEFI +DAQ +DG+ + +LA+ W FV+NVS D Q PRVLLTHIPLYR D+T
Sbjct: 180 RRFMIGNVEFISIDAQAIDGNSKKDLASEVWKFVQNVSTDAQSHPRVLLTHIPLYRPDQT 239
Query: 239 PCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSH 298
PCGPHR S +I+QR R QE++YQNYIT ESS +LL+LIKP+LVLSGHDHDQCTV H
Sbjct: 240 PCGPHRGSSVIDQRFWRHSQDQEVIYQNYITPESSTKLLELIKPILVLSGHDHDQCTVIH 299
Query: 299 ESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIY 358
+S + EHT+GT+SWQQGN++PSF LLS + N S+ ++ + T+LCFLP Q IY
Sbjct: 300 KSKAGSVTEHTLGTVSWQQGNIHPSFMLLSVPKAFHRNSSDPDKMLHTQLCFLPSQLFIY 359
Query: 359 IGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAH--GKQLFKVGTKEKTEDENCEYEMVW 416
+ YL LF+++L+ LL WP G++F + +D +++ TKEK EDENCEYEMVW
Sbjct: 360 MWYLSLFVMSLLALLLWPNHGISFLNNAADCISNVMKSSFLSSVTKEKNEDENCEYEMVW 419
Query: 417 DAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD------- 469
DAEGSMHLV+KA TP+ R D +E+GNAVMR A+K ++++E+ M+ D
Sbjct: 420 DAEGSMHLVKKALQTPVKRQSDKP-LVEKGNAVMRSAARKNASEQIELVMDSDVNASAGG 478
Query: 470 -DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
DP+ SKS K +I R++R M+ VIA +N+P+YMMLLFKDWI+Q
Sbjct: 479 SDPLMR---SASKSRTKLVIQRVIRTIMMVIVIAALNVPIYMMLLFKDWIEQ 527
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297853154|ref|XP_002894458.1| protein serine/threonine phosphatase [Arabidopsis lyrata subsp. lyrata] gi|297340300|gb|EFH70717.1| protein serine/threonine phosphatase [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/535 (55%), Positives = 390/535 (72%), Gaps = 21/535 (3%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDG---YDKVAVIAD 58
MK HHKLT+ LCL W T+LYGEM AFW+P+L +C+WP S DGV+ + KVA++AD
Sbjct: 1 MKHHHKLTVALCLIWAATILYGEMFAFWVPSLFTCSWPHHKS-DGVESDGNFTKVAIVAD 59
Query: 59 PQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD 118
PQ+MDKTS L K+LALE+AQ +TD+ MRR+FF S+LPFKPDV+LFLGD+FDGGP+L +
Sbjct: 60 PQLMDKTSFRLSSKTLALELAQLYTDINMRRSFFRSVLPFKPDVVLFLGDYFDGGPFLPE 119
Query: 119 EEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRN 178
EEWQESL+RFKH+FGL SQ + DI ++PGNHD GY+ + SHK +++ RYEK FG RN
Sbjct: 120 EEWQESLSRFKHVFGLNSQGKVGDIPTFYIPGNHDLGYSRVASHKQDVIDRYEKIFGFRN 179
Query: 179 YRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQ---LLPRVLLTHIPLYRR 235
+RF +G VEFI +DAQ +DG+P+ ++A+ W FV+NVS D Q PRVLLTHIPLYR
Sbjct: 180 HRFMIGSVEFISIDAQAIDGNPQKDMASEVWKFVQNVSTDAQSHDSHPRVLLTHIPLYRP 239
Query: 236 DETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCT 295
D+TPCGPHR +I+QR R QE++YQNYIT ESS +LL+LIKP+LVLSGHDHDQCT
Sbjct: 240 DQTPCGPHRGGSVIDQRFWRHFQDQEVIYQNYITPESSTKLLELIKPILVLSGHDHDQCT 299
Query: 296 VSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQT 355
V+H+S +KEHT+GTISWQQGN+YPSF LLS N+ N S+ ++ + T+LCFLP Q
Sbjct: 300 VTHKSKAGSVKEHTLGTISWQQGNIYPSFMLLSVPNAVHQNSSDPDKMLHTQLCFLPCQL 359
Query: 356 HIYIGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAH--GKQLFKVGTKEKTEDENCEYE 413
IY+ YL LF V+L+ LL WP G++F + +D +++ TKEK EDENCEYE
Sbjct: 360 FIYMWYLSLFAVSLLALLLWPNHGISFLNNAADCISNVMKSSFLSSVTKEKNEDENCEYE 419
Query: 414 MVWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD---- 469
MVWDAEGSMHLV+KA TP+ R D +E+GNAV+R A+K ++++E+ M+ D
Sbjct: 420 MVWDAEGSMHLVKKALQTPVKRHSDKP-LVEKGNAVLRSAARKNASEQIELVMDSDVNAG 478
Query: 470 ----DPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
DP+ SKS K +I R++R M VIA +N+P+Y+ LLFKDW++Q
Sbjct: 479 AGGSDPLMR---SASKSRTKLVIQRVIRTIMMTIVIAALNVPIYIWLLFKDWVEQ 530
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145325421|ref|NP_001077715.1| hydrolase/ protein serine/threonine phosphatase [Arabidopsis thaliana] gi|332194867|gb|AEE32988.1| hydrolase/ protein serine/threonine phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/443 (59%), Positives = 332/443 (74%), Gaps = 7/443 (1%)
Query: 2 MKQHHKLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDG---YDKVAVIAD 58
MK HHKLT+ LCL W T+LYGEM AFW+P+L +C+WP S DGV+ + KVA++ D
Sbjct: 1 MKHHHKLTVALCLIWAATILYGEMFAFWVPSLFTCSWPHHKS-DGVESDGNFTKVAIVTD 59
Query: 59 PQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD 118
PQ+MDKTS L K+LALE+AQF+TD+ MRR+FF S+LPFKPDV+LFLGD+FDGGP+LS+
Sbjct: 60 PQLMDKTSFRLSSKTLALELAQFYTDINMRRSFFRSVLPFKPDVVLFLGDYFDGGPFLSE 119
Query: 119 EEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIV-RRYEKEFGKR 177
EEWQESLNR KH+FGL S+ R DI ++PGNHD GY+ + SHK +V RYEK FG R
Sbjct: 120 EEWQESLNRLKHVFGLNSEGRVGDIPTFYIPGNHDIGYSRVASHKQGVVIDRYEKVFGVR 179
Query: 178 NYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDE 237
N RF +G VEFI +DAQ +DG+ + +LA+ W FV+NVS D Q PRVLLTHIPLYR D+
Sbjct: 180 NRRFMIGNVEFISIDAQAIDGNSKKDLASEVWKFVQNVSTDAQSHPRVLLTHIPLYRPDQ 239
Query: 238 TPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVS 297
TPCGPHR S +I+QR R QE++YQNYIT ESS +LL+LIKP+LVLSGHDHDQCTV
Sbjct: 240 TPCGPHRGSSVIDQRFWRHSQDQEVIYQNYITPESSTKLLELIKPILVLSGHDHDQCTVI 299
Query: 298 HESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHI 357
H+S + EHT+GT+SWQQGN++PSF LLS + N S+ ++ + T+LCFLP Q I
Sbjct: 300 HKSKAGSVTEHTLGTVSWQQGNIHPSFMLLSVPKAFHRNSSDPDKMLHTQLCFLPSQLFI 359
Query: 358 YIGYLLLFIVTLVTLLFWPTGGVNFGCHCSDFLAH--GKQLFKVGTKEKTEDENCEYEMV 415
Y+ YL LF+++L+ LL WP G++F + +D +++ TKEK EDENCEYEMV
Sbjct: 360 YMWYLSLFVMSLLALLLWPNHGISFLNNAADCISNVMKSSFLSSVTKEKNEDENCEYEMV 419
Query: 416 WDAEGSMHLVRKATNTPITRAKD 438
WDAEGSMHLV+KA TP+ R D
Sbjct: 420 WDAEGSMHLVKKALQTPVKRQSD 442
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115453399|ref|NP_001050300.1| Os03g0397300 [Oryza sativa Japonica Group] gi|57222454|gb|AAP12933.2| putative cell division control protein [Oryza sativa Japonica Group] gi|108708636|gb|ABF96431.1| Ser/Thr protein phosphatase family protein, expressed [Oryza sativa Japonica Group] gi|113548771|dbj|BAF12214.1| Os03g0397300 [Oryza sativa Japonica Group] gi|215701023|dbj|BAG92447.1| unnamed protein product [Oryza sativa Japonica Group] gi|222625075|gb|EEE59207.1| hypothetical protein OsJ_11157 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/512 (53%), Positives = 355/512 (69%), Gaps = 16/512 (3%)
Query: 22 YGEMVAFWIPTLRSCTWPSSSSMDGV---DGYDKVAVIADPQIMDKTSLHLPPKSLALEV 78
YGEM A+W L SSSS + + K+AV+ADPQ+MD TSL LPP S+AL+
Sbjct: 21 YGEMGAYWAARLSCSWPSSSSSPPSSLSPNNHVKIAVVADPQLMDSTSLGLPPSSIALQA 80
Query: 79 AQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQD 138
A+F+TDL MRR+F + +LPFKPD++LFLGDHFDGGPY+S+EEW ESL+RFKHIF +
Sbjct: 81 AEFYTDLNMRRSFQSVVLPFKPDMLLFLGDHFDGGPYMSNEEWHESLSRFKHIFSMNEHI 140
Query: 139 RFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDG 198
+I +++L GNHD GY+A PE++ RYEKEFG RNY+F GKV+F+VVDAQTLDG
Sbjct: 141 TNPNIPIYYLSGNHDIGYSAFHKIHPEVISRYEKEFGSRNYQFLAGKVDFVVVDAQTLDG 200
Query: 199 HPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGH 258
E +++W+F+K +S + P+VLLTHIPLYR D +PCGPHRSSP+INQR+
Sbjct: 201 AKESKERSSSWEFIKALSPGNKTNPKVLLTHIPLYRPDNSPCGPHRSSPVINQRVSNAAM 260
Query: 259 SQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG 318
Q I YQNY+++E+S+ LL L+KPVLVLSGHDHDQCTV H + + EHT+GTISWQQG
Sbjct: 261 DQGITYQNYLSKETSDLLLHLLKPVLVLSGHDHDQCTVVHPTPFGPVTEHTLGTISWQQG 320
Query: 319 NLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQTHIYIGYLLLFIVTLVTLLFWPTG 378
NLYPSF LLSA N +++E VLT LCFLP QTHIYI Y+ F+VTL+ L+ WPT
Sbjct: 321 NLYPSFMLLSAGPKLPANSTDIEHEVLTNLCFLPKQTHIYIWYIFQFVVTLLLLILWPTN 380
Query: 379 GVNFGCHCSDFLAH----GKQLFKVGTKEKTEDENCEYEMVWDAEGSMHLVRKA-TNTPI 433
G+ + + F++ +LF TKEK ++E+ EYEMVWDAEGSMHLV+KA TP
Sbjct: 381 GLRSLPYVNSFVSFMRSVAAELFS-RTKEKDDEEDGEYEMVWDAEGSMHLVKKAVARTPS 439
Query: 434 TRAKDTSGTMERGNAVMRHTAKKGNAQE-----VEISMNVDDPMTNLPPRTSKSTAKFII 488
T + S T RGN V R TA+K + VE+S + PR+SK + ++
Sbjct: 440 TSSD--SRTTGRGNVVARPTARKNQPEPDSSVLVEMSSEMISEDGGKVPRSSKLKIRRVL 497
Query: 489 HRLVRMFRMLTVIAVVNIPLYMMLLFKDWIDQ 520
RL R+ + + VIA +N+PLYMMLLFKDWID+
Sbjct: 498 QRLFRVIQSIVVIAALNVPLYMMLLFKDWIDR 529
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 520 | |||
| cd07384 | 171 | cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae C | 5e-63 | |
| cd08163 | 257 | cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 a | 2e-48 | |
| cd08165 | 156 | cd08165, MPP_MPPE1, human MPPE1 and related protei | 1e-21 | |
| cd08166 | 195 | cd08166, MPP_Cdc1_like_1, uncharacterized subgroup | 1e-11 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-11 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 2e-09 | |
| cd08164 | 193 | cd08164, MPP_Ted1, Saccharomyces cerevisiae Ted1 a | 1e-08 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 2e-08 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 8e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-05 | |
| cd07391 | 172 | cd07391, MPP_PF1019, Pyrococcus furiosus PF1019 an | 0.002 |
| >gnl|CDD|163627 cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 5e-63
Identities = 97/265 (36%), Positives = 123/265 (46%), Gaps = 94/265 (35%)
Query: 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGG 113
++ADPQI+D+TS PK AL + +F+TD YMRRAF ++ KPDV+LFLGD FDGG
Sbjct: 1 LLVADPQILDETSYPPRPKI-ALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGG 59
Query: 114 PYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE 173
EEW+E + RFK IF L S DI V+++PGNHD GY ++S PE+V R+E+
Sbjct: 60 RIADSEEWEEYVKRFKKIFFLPSNGL-EDIPVYYVPGNHDIGYGEVISF-PEVVDRFERY 117
Query: 174 FGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLY 233
F +LLTHIPLY
Sbjct: 118 F--------------------------------------------------ILLTHIPLY 127
Query: 234 RRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ 293
RLLD IKPVL+LSGHDHDQ
Sbjct: 128 -----------------------------------------RLLDTIKPVLILSGHDHDQ 146
Query: 294 CTVSHESNHEHIKEHTVGTISWQQG 318
C V H S ++E TV + SW+ G
Sbjct: 147 CEVVHSSKAGSVREITVKSFSWRMG 171
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together with Emp24p and Erv25p in cargo exit from the ER, and human MPPE1. The human MPPE1 gene is a candidate susceptibility gene for bipolar disorder. These proteins belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 171 |
| >gnl|CDD|163670 cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 2e-48
Identities = 92/272 (33%), Positives = 133/272 (48%), Gaps = 22/272 (8%)
Query: 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGG 113
A++ADPQ++D + P L + + F D Y+RR + KPD +FLGD FDGG
Sbjct: 1 ALVADPQLVDDHTYPGRPWIL-NTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDLFDGG 59
Query: 114 PYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE 173
+DE W++ NRF IF + V LPGNHD G+ + +R+EK
Sbjct: 60 RDWADEYWKKEYNRFMRIFDPSPGRK----MVESLPGNHDIGFGN--GVVLPVRQRFEKY 113
Query: 174 FGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSI-DFQLLPRVLLTHIPL 232
FG + VG F+++D +L + ++ +F+ + S + PR+LLTH+PL
Sbjct: 114 FGPTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKSKPRILLTHVPL 173
Query: 233 YRRDETPCGPHRSS--PIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHD 290
YR T CGP R S P+ G+ YQN + S +L ++PV+ SG D
Sbjct: 174 YRPPNTSCGPLRESKTPLPYGY----GYQ----YQNLLEPSLSEVILKAVQPVIAFSGDD 225
Query: 291 HDQCTVSHE----SNHEHIKEHTVGTISWQQG 318
HD C V HE +E TV +IS G
Sbjct: 226 HDYCEVVHEYQFNGKSGSTREITVKSISMAMG 257
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|163672 cd08165, MPP_MPPE1, human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 1e-21
Identities = 63/264 (23%), Positives = 91/264 (34%), Gaps = 109/264 (41%)
Query: 55 VIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGP 114
+AD ++ H K + M R+F S+ +PDV+ LGD FD G
Sbjct: 2 FLADTHLLGSILGHWLDK--------LRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGK 53
Query: 115 YLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF 174
+ +DEEW++ + RFK +FG D+ +H + GNHD G+ ++ + R+EK F
Sbjct: 54 WSTDEEWEDYVERFKKMFGH-----PPDLPLHVVVGNHDIGFHYEMT--TYKLERFEKVF 106
Query: 175 GKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYR 234
+LL H PLYR
Sbjct: 107 --------------------------------------------------ILLQHFPLYR 116
Query: 235 RDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQC 294
LL +KP LVLSGH H C
Sbjct: 117 -----------------------------------------LLQWLKPRLVLSGHTHSFC 135
Query: 295 TVSHESNHEHIKEHTVGTISWQQG 318
V+H + E TV + SW+
Sbjct: 136 EVTHP---DGTPEVTVPSFSWRNR 156
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 156 |
| >gnl|CDD|163673 cd08166, MPP_Cdc1_like_1, uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 1e-11
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 56 IADPQIM--DKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGG 113
+ADPQI+ + L +A++ +D Y+++ + ++ +PD+++FLGD D G
Sbjct: 3 VADPQILGYQNENFGLGW------IARWDSDRYLKKTYHLALNFVQPDIVIFLGDLMDEG 56
Query: 114 PYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD-NGYAALLSHKPEIVRRYEK 172
+D+E+ + RF +IF + ++ +LPG++D G +RR+EK
Sbjct: 57 SIANDDEYYSYVQRFINIFEVP-----NGTKIIYLPGDNDIGGEEEDPI--ESKIRRFEK 109
Query: 173 EF 174
F
Sbjct: 110 YF 111
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 195 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-11
Identities = 43/240 (17%), Positives = 68/240 (28%), Gaps = 57/240 (23%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFD 111
++ VI D LH DL + + KPD++LFLGD D
Sbjct: 1 RILVIGD--------LHGG-----------LDDLDLLLLLLELLGEPKPDLVLFLGDLVD 41
Query: 112 GGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE 171
GP + + K V+ + GNHD
Sbjct: 42 RGPPSLEVLALLFALKLK-----------APGPVYLVRGNHDFDSGN----SELGFYLEC 86
Query: 172 KEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIP 231
V ++ +L G G + + + + + + ++LL H P
Sbjct: 87 AGLPYVLGNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGP 146
Query: 232 LYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDH 291
L ++ L+ E+ LL LVL GH H
Sbjct: 147 LSPSLDS-------------------GDDIYLFGEEALED----LLKDNGVDLVLRGHTH 183
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 48/193 (24%), Positives = 72/193 (37%), Gaps = 30/193 (15%)
Query: 55 VIADPQI-MDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI--LPFKPDVILFLGDHFD 111
ADPQ+ + K +L E+ +A +I L KP ++ GD +
Sbjct: 9 QGADPQLGLIKKNLEGGGDEWDEEIK------LTEQAV-QAINKLNPKPKFVVVCGDLVN 61
Query: 112 GGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE 171
P E Q S K + DI + + GNHD G E ++ Y
Sbjct: 62 AMPGDELRERQVS--DLKDVL----SLLDPDIPLVCVCGNHDVGNTP----TEESIKDYR 111
Query: 172 KEFGKRNYRFTVGKVEFIVVDAQTLDGH---PEGNLAAATWDFVKNVSI----DFQLLPR 224
FG + F VG V FIV+++Q PE A W + + I D +
Sbjct: 112 DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQDVW-LEEQLEIAKESDCK--HV 168
Query: 225 VLLTHIPLYRRDE 237
++ HIP + D
Sbjct: 169 IVFQHIPWFLEDP 181
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163671 cd08164, MPP_Ted1, Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 52/281 (18%), Positives = 87/281 (30%), Gaps = 124/281 (44%)
Query: 56 IADPQI--MDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGG 113
+ DPQI K + L L F D ++ KPD ++ LGD F
Sbjct: 3 LGDPQIEGDHKIENYGFKGRLDL----FGNDYFLGHIVSMMQFWLKPDAVVVLGDLF-SS 57
Query: 114 PYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHF------------LPGNHDNGYAALLS 161
++ DEE+ + +R++ F ++ + +I + + GNHD GY ++
Sbjct: 58 QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGYGGEVT 117
Query: 162 HKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQL 221
+ R+E F
Sbjct: 118 --EARIERFESLF----------------------------------------------- 128
Query: 222 LPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK 281
+LLTH+PLY ++ K
Sbjct: 129 ---ILLTHVPLY-----------------------------------------KIFLEGK 144
Query: 282 PVLVLSGHDHDQCTVSHESNHE------------HIKEHTV 310
P L+L+GHDH+ C H SN +++E+T+
Sbjct: 145 PGLILTGHDHEGCDYQHPSNPSVTWATSLEESGNNVREYTL 185
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 193 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 54/242 (22%), Positives = 81/242 (33%), Gaps = 63/242 (26%)
Query: 60 QIMDKTSLHL-PPKSLALEVAQFFTDLYMRRAFFASI--LPFKPDVILFLGDHFDGGPYL 116
QI D LHL AL T + A I L +PD++L GD L
Sbjct: 4 QISD---LHLRADGEGALLGVD--TAASLEAVL-AHINALHPRPDLVLVTGD-------L 50
Query: 117 SDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD---NGYAALLSHKPEIVRRYEKE 173
+D+ ES R + + I V+ LPGNHD A P
Sbjct: 51 TDDGSPESYERLRELL-----AAL-PIPVYLLPGNHDDRAAMRAVFPELPPAP------- 97
Query: 174 FGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLY 233
G Y +G I++D+ G G L AA D+++ + P ++ H P +
Sbjct: 98 -GFVQYVVDLGGWRLILLDSSV-PGQHGGELCAAQLDWLEAALAEAPDKPTLVFLHHPPF 155
Query: 234 RRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK----PVLVLSGH 289
P G ++ I ++ L ++ +L GH
Sbjct: 156 -----PVG----IAWMDA----------------IGLRNAEALAAVLARHPNVRAILCGH 190
Query: 290 DH 291
H
Sbjct: 191 VH 192
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 8e-06
Identities = 57/272 (20%), Positives = 90/272 (33%), Gaps = 72/272 (26%)
Query: 52 KVAVIADPQIMDKTSLHL-PPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHF 110
++A I+D LHL + E+ + A A+I KPD+++ GD
Sbjct: 2 RIAHISD--------LHLGALGVDSEELLE---------ALLAAIEQLKPDLLVVTGD-- 42
Query: 111 DGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD--NGYAALLSHKPEIVR 168
L+++ E R K + L + V +PGNHD S +
Sbjct: 43 -----LTNDGEPEEYRRLKEL--LARLELPAP--VIVVPGNHDARVVNGEAFSDQFFNRY 93
Query: 169 RYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSID---FQLLPRV 225
+ G I +D+ + G P G L A D+++ V
Sbjct: 94 AVLVGA------CSSGGWRVIGLDSS-VPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146
Query: 226 LLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPV-- 283
+L H PL TG + L + LLD++
Sbjct: 147 VLHHHPLP-------------------SPGTGVDRVAL-------RDAGELLDVLIAHGN 180
Query: 284 ---LVLSGHDHDQCTVSHESNHEHIKEHTVGT 312
LVLSGH H ++ N + + VG
Sbjct: 181 DVRLVLSGHIHLAAQTVYQLNGTRLSDLLVGA 212
|
Length = 301 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-05
Identities = 21/85 (24%), Positives = 27/85 (31%), Gaps = 15/85 (17%)
Query: 80 QFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDR 139
+ A KPD +L LGD GP +
Sbjct: 7 HGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALAL-----------LL 55
Query: 140 FRDIRVHFLPGNHDNGYAALLSHKP 164
I V+ +PGNHD LL+H P
Sbjct: 56 LLGIPVYVVPGNHD----ILLTHGP 76
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163634 cd07391, MPP_PF1019, Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
Query: 98 FKPDVILFLGDHFDGGPYLSDEEWQES-LNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGY 156
+ P+ ++ LGD LS +E++E R D+ V + GNHD G
Sbjct: 40 YGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAK----------DVDVILIRGNHDGGL 89
Query: 157 AALLSHKPEIVRRY 170
+L V
Sbjct: 90 PEILKDLNVEVVEG 103
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 172 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 520 | |||
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 100.0 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.96 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.95 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.94 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 99.94 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.9 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 99.87 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.86 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.84 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.81 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.8 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.78 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.78 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.75 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.74 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.72 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.71 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.71 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.71 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.63 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.63 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.62 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.6 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.54 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.54 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.52 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.51 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.49 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.45 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.42 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.34 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.3 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.29 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.27 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.22 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 99.2 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.14 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.14 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.13 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.13 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.11 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.08 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.05 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.02 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.0 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.97 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.93 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.85 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.84 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 98.84 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.76 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.62 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.58 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.57 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.56 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.51 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.45 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 98.42 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 98.39 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.28 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.17 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.15 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.11 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 98.07 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.04 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.02 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.96 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.9 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 97.8 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.8 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.79 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.79 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.76 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.76 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.75 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.68 | |
| PHA02239 | 235 | putative protein phosphatase | 97.68 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.61 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.5 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 97.46 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.24 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.23 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.21 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.19 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.19 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.11 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.08 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.0 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.85 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 96.72 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.72 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.69 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 96.66 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 96.63 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.58 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.58 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.55 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.49 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.46 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.32 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.25 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.15 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.14 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.08 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 96.06 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.04 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.63 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 95.6 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 95.05 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.87 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 94.7 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 94.51 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.38 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.71 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 93.65 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 93.23 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 90.65 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 89.82 | |
| PTZ00235 | 291 | DNA polymerase epsilon subunit B; Provisional | 87.89 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 83.54 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 82.83 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 80.95 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 80.31 |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-53 Score=424.22 Aligned_cols=252 Identities=35% Similarity=0.591 Sum_probs=221.5
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
++||||||.|+++|+++++ +...++++.+|.||+|++..++..++||+||++|||+|+|++.++++|.++++||.++|.
T Consensus 1 ~~vaDpql~~~~sy~~~~~-~~~~~~~~~~D~ylr~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~ 79 (257)
T cd08163 1 ALVADPQLVDDHTYPGRPW-ILNTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFD 79 (257)
T ss_pred CcccCCccccCCccCCCch-hhhhhhHHhhHHHHHHHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhc
Confidence 4789999999999996554 556788999999999999998888999999999999999998889999999999999997
Q ss_pred cccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHH
Q 010015 134 LKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK 213 (520)
Q Consensus 134 ~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~ 213 (520)
.. ....|+++||||||+|++. ......++||+++||+.++.+++||++||+|||+.+.+...+.+..++++||+
T Consensus 80 ~~----~~~~pv~~VpGNHDig~~~--~~~~~~~~rf~~~Fg~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~ 153 (257)
T cd08163 80 PS----PGRKMVESLPGNHDIGFGN--GVVLPVRQRFEKYFGPTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLH 153 (257)
T ss_pred CC----CccceEEEeCCCcccCCCC--CCCHHHHHHHHHHhCCCceEEEECCEEEEEEccccccCCcccccchhHHHHHH
Confidence 42 2358999999999998864 34556789999999999999999999999999998888777788899999999
Q ss_pred Hhhcc-CCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccC
Q 010015 214 NVSID-FQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHD 292 (520)
Q Consensus 214 ~ll~~-~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~ 292 (520)
+.+.. ..+.|+|||+|+|+|++++++|||.|++..+. ....|++|||+|+++.+++||++++|++|||||||+
T Consensus 154 ~~l~~~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~------~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~ 227 (257)
T cd08163 154 SFSAMKVKSKPRILLTHVPLYRPPNTSCGPLRESKTPL------PYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHD 227 (257)
T ss_pred hhhhccCCCCcEEEEeccccccCCCCCCCCccccCCCC------CCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCc
Confidence 96543 46789999999999999889999998764321 235689999999999999999999999999999999
Q ss_pred CCcEEecc----CCCCeEEEEeCceeecCC
Q 010015 293 QCTVSHES----NHEHIKEHTVGTISWQQG 318 (520)
Q Consensus 293 ~c~~~h~~----~~~~i~Eitv~S~S~~~g 318 (520)
||+++|.. ..++++|+||+||||+||
T Consensus 228 ~C~~~h~~~~~~~~~~~~E~tv~S~s~~~g 257 (257)
T cd08163 228 YCEVVHEYQFNGKSGSTREITVKSISMAMG 257 (257)
T ss_pred cceeEcccccCCCCCCceEEEecccccccC
Confidence 99999974 346899999999999997
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=349.52 Aligned_cols=328 Identities=31% Similarity=0.475 Sum_probs=248.4
Q ss_pred HHHHHHHHHHhhcceEEEEecccCcccCCCCCCCCCCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHH
Q 010015 11 FLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRA 90 (520)
Q Consensus 11 ~l~~~w~~~~~~~E~~~~~~~~~~~C~W~~~~~~~~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~ 90 (520)
...++|+.+++|+|..+|+.+.. +|+||.++.+..+++.+|++++|||||.|.... ..+..+++++.+|+||+|+
T Consensus 10 ~~~~~~~~lll~~e~v~~~~~~~-~c~Wp~~~~~~~~~n~~ki~~vaDPQilg~~~~----~~~~~~Ldk~~~D~~lrr~ 84 (410)
T KOG3662|consen 10 KVIILLQKLLLYVEKVIYYRALF-QCQWPGKKQWASNENSTKILLVADPQILGNWPK----KFLVSWLDKYGNDWYLRRS 84 (410)
T ss_pred hHHHHHHHHHHHHhheeeeeecc-cccCCccccccCCCCceEEEEecCchhcCCCCC----ccccchHHhhhhHHHHHHH
Confidence 55667777888999999999877 999999998877789999999999999997632 2356789999999999999
Q ss_pred HHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHH
Q 010015 91 FFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRY 170 (520)
Q Consensus 91 ~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf 170 (520)
|..++..++||+++|+|||+|+|+|.+++||.++++||++||.. ...+|++++|||||+|++. +..++..+||
T Consensus 85 f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~-----k~~~~~~~i~GNhDIGf~~--~~~~~~i~Rf 157 (410)
T KOG3662|consen 85 FDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR-----KGNIKVIYIAGNHDIGFGN--ELIPEWIDRF 157 (410)
T ss_pred HHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC-----CCCCeeEEeCCcccccccc--ccchhHHHHH
Confidence 99999999999999999999999999999999999999999986 3789999999999999985 3456678999
Q ss_pred HHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccC---CCCCCCCCCCCCCCCc
Q 010015 171 EKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIP---LYRRDETPCGPHRSSP 247 (520)
Q Consensus 171 ~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~P---L~~~~~~~Cg~~r~~~ 247 (520)
++.||+.+..|++|++.|+++|+.++.+..+..+....++++++......+.|+++++|.| ...+...+|+|.+...
T Consensus 158 e~~fg~~~r~f~v~~~tf~~~d~~~ls~~~~~~~~~~~~~fl~~~~~~~~~~~r~~~~h~p~~~~~~p~l~~~~p~~~~h 237 (410)
T KOG3662|consen 158 ESVFGPTERRFDVGNLTFVMFDSNALSGNPDINVLSEARDFLNSVSTSGDGYPRILLAHDPDLYGIKPELPTSGPDRLQH 237 (410)
T ss_pred HHhhcchhhhhccCCceeEEeeehhhcCCCchhhhhhhhhhhcccccCCCCcceeeecccchhccCCcccCCCccccccc
Confidence 9999998889999999999999999999887777888899999987766679999999998 4445555677765543
Q ss_pred ccchhhhccCCCccchhccccCHHHH-HHHHHHhCC-------------------cEEEECCccCCCcEEeccCCCCeEE
Q 010015 248 IINQRIVRTGHSQEILYQNYITEESS-NRLLDLIKP-------------------VLVLSGHDHDQCTVSHESNHEHIKE 307 (520)
Q Consensus 248 ~~~~~~~~~~~~~g~~yqn~ls~e~s-~~LL~~l~p-------------------~lVfsGH~H~~c~~~h~~~~~~i~E 307 (520)
. ..-.|.++|..+-++.. ..+++...+ .+++.||+|..|...|.....++.|
T Consensus 238 ~--------ply~g~~~qc~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~k~~~~~~g~~~ 309 (410)
T KOG3662|consen 238 I--------PLYSGSAAQCLFEPATKVIELNENIEREFDLSGDDEDHCSLLKLNYKLVVGGHDHKEYNDKHASMSSGALE 309 (410)
T ss_pred c--------eeecccccccccccccchHHHhhhhhhhcccccccccceEEeecccccccCCcCccccccccccccccccc
Confidence 2 12234567765544444 555555543 4556666666655555432345666
Q ss_pred EEeCceeecCCCCCCcEEEEEEEcCCcccCCcccccEEEeEEec---cccceeehhhHHHHHHHHHHH
Q 010015 308 HTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFL---PMQTHIYIGYLLLFIVTLVTL 372 (520)
Q Consensus 308 itv~S~S~~~g~~~Pgf~llsl~~~~~~~~~~~~~~~~t~~C~L---P~q~~~~~~Y~~~~v~t~l~l 372 (520)
+|+.++++.++. .++|......+ ....|.. |.....|++++...++-+.+|
T Consensus 310 ~tv~~~s~~~~~-~~~~i~~~~~~-------------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~l 363 (410)
T KOG3662|consen 310 YTVLLLSLRFGQ-DFNMIFGGIFP-------------DIKLVSSPRTELVTRRYIWKAISQIIFAAAL 363 (410)
T ss_pred cchhhhhhhccc-cHHHHhhcccc-------------ceEEEEecCCCceEEEeeHHHHHHHHHHHHH
Confidence 666666666554 34443333322 3345555 445666777744443333333
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=243.56 Aligned_cols=243 Identities=23% Similarity=0.246 Sum_probs=167.1
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhH-HHHHHHHHHhh-CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTD-LYMRRAFFASI-LPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d-~~l~r~~~~~~-~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
++++++++||+|++-....... ....+... ..+++++..+. ...+||+|+++|||++++...+ ...++++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~------~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~--~~~~~~~ 74 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEG------GGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDE--LRERQVS 74 (262)
T ss_pred CCEEEEEecCCccchhhccccC------chhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchh--hHHHHHH
Confidence 6799999999999853322100 01111111 12455555442 2348999999999999885321 1223455
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCC-CCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGH-PEGNLA 205 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~-~~g~i~ 205 (520)
+|.+++..- ..++|++.++||||++... ..+..++|.+.||+.+|++..|+++||+|||..+... ..+.+.
T Consensus 75 ~~~~~~~~~----~~~vp~~~i~GNHD~~~~~----~~~~~~~f~~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~ 146 (262)
T cd07395 75 DLKDVLSLL----DPDIPLVCVCGNHDVGNTP----TEESIKDYRDVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPELA 146 (262)
T ss_pred HHHHHHhhc----cCCCcEEEeCCCCCCCCCC----ChhHHHHHHHHhCCcceEEEECCEEEEEeccccccCccccccch
Confidence 566666531 2478999999999986432 2345678889999999999999999999999754322 234678
Q ss_pred HHHHHHHHHhhccC---CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHH---
Q 010015 206 AATWDFVKNVSIDF---QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDL--- 279 (520)
Q Consensus 206 ~~ql~wL~~ll~~~---~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~--- 279 (520)
.+|++||++.+.+. ..+++||++|+|++..... +. .+ |-+ ++.+.++++.+.
T Consensus 147 ~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~-~~-------------------~~~-~~~~~~~~l~~ll~~ 204 (262)
T cd07395 147 QAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPD-EE-DS-------------------YFN-IPKSVRKPLLDKFKK 204 (262)
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCC-CC-cc-------------------cCC-cCHHHHHHHHHHHHh
Confidence 99999999977654 4678999999999863211 10 00 111 223344555444
Q ss_pred hCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 280 IKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 280 l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
.+.+++||||+|.+..... +++.+++.++++...+...|||++++++++.
T Consensus 205 ~~V~~v~~GH~H~~~~~~~----~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 205 AGVKAVFSGHYHRNAGGRY----GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred cCceEEEECccccCCceEE----CCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 4568999999999876554 5889999999997777778999999998774
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=234.45 Aligned_cols=172 Identities=27% Similarity=0.527 Sum_probs=144.8
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
++||||||.|.+.++. ...+++++.+|+||++++..+++.++||+||++|||+|+|+..++++|.++++||+++|.
T Consensus 1 llvADPqllg~~~~~~----~~~~~~~~~~D~yl~r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~ 76 (195)
T cd08166 1 LLVADPQILGYQNENF----GLGWIARWDSDRYLKKTYHLALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFE 76 (195)
T ss_pred CcccCccccCCCCCCc----cccHHHHHHHHHHHHHHHHHHHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhc
Confidence 5799999999876542 245889999999999999999999999999999999999998889999999999999998
Q ss_pred cccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHH
Q 010015 134 LKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK 213 (520)
Q Consensus 134 ~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~ 213 (520)
.+ .++|+++||||||+|+... ...++.++||+++|
T Consensus 77 ~~-----~~~~~~~VpGNHDIG~~~~-~~~~~~v~RF~~~F--------------------------------------- 111 (195)
T cd08166 77 VP-----NGTKIIYLPGDNDIGGEEE-DPIESKIRRFEKYF--------------------------------------- 111 (195)
T ss_pred CC-----CCCcEEEECCCCCcCCCCC-CcCHHHHHHHHHhh---------------------------------------
Confidence 63 6899999999999997543 34477899999998
Q ss_pred HhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCC
Q 010015 214 NVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 214 ~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~ 293 (520)
|+++|.|+....+ ..+..+...++|.+|||||+|.+
T Consensus 112 -----------i~lsH~P~~~~~~---------------------------------~~~~~~~~~~~p~~Ifs~H~H~s 147 (195)
T cd08166 112 -----------IMLSHVPLLAEGG---------------------------------QALKHVVTDLDPDLIFSAHRHKS 147 (195)
T ss_pred -----------eeeeccccccccc---------------------------------HHHHHHHHhcCceEEEEcCccce
Confidence 9999999986321 13667888899999999999999
Q ss_pred CcEEeccC-----------------------CCCeEEEEeCceeecCC
Q 010015 294 CTVSHESN-----------------------HEHIKEHTVGTISWQQG 318 (520)
Q Consensus 294 c~~~h~~~-----------------------~~~i~Eitv~S~S~~~g 318 (520)
..+.+... ...+.|+.||+||.+||
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ei~vptcsyrmg 195 (195)
T cd08166 148 SIFMYDRLLRQNSLFTRVSPDDPTLKQLILQNEVMHEIQVPTCSYRMG 195 (195)
T ss_pred eeEEeecccchhheeeeccCCcchHHHhhcCCcceEEEECCcccccCC
Confidence 87765321 12478999999999887
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-26 Score=230.58 Aligned_cols=242 Identities=17% Similarity=0.167 Sum_probs=160.0
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhh-CCCCCCEEEEcCCcCCCCCCCCHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI-LPFKPDVILFLGDHFDGGPYLSDEEWQESL 125 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~-~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~ 125 (520)
..++++|++|||+||....... . .+..+...++++++.+. ...+||+||++|||++++ +.++|
T Consensus 11 ~~~~~~i~~iSD~Hl~~~~~~~-----~----~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~---~~~~~---- 74 (275)
T PRK11148 11 GEARVRILQITDTHLFADEHET-----L----LGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDH---SSEAY---- 74 (275)
T ss_pred CCCCEEEEEEcCcccCCCCCCc-----e----eccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCC---CHHHH----
Confidence 3477999999999996432111 0 01112224566666553 345899999999999987 45544
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-HhCCcceEEEeCCEEEEEEeCCCCCCCCCCCC
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-EFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNL 204 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i 204 (520)
+++.+.+. ..++|++++|||||.... ..+.+.+ .+++.++.+..++++||+|||. ..|...|.+
T Consensus 75 ~~~~~~l~------~l~~Pv~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~Lds~-~~g~~~G~l 139 (275)
T PRK11148 75 QHFAEGIA------PLRKPCVWLPGNHDFQPA--------MYSALQDAGISPAKHVLIGEHWQILLLDSQ-VFGVPHGEL 139 (275)
T ss_pred HHHHHHHh------hcCCcEEEeCCCCCChHH--------HHHHHhhcCCCccceEEecCCEEEEEecCC-CCCCcCCEe
Confidence 44666665 467899999999996311 1122221 1223333444567999999996 456667889
Q ss_pred CHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh-CCc
Q 010015 205 AAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI-KPV 283 (520)
Q Consensus 205 ~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l-~p~ 283 (520)
.++|++||++.+.+.++++++|+.|||+..... ++.++. ..-+.+...++++.. +++
T Consensus 140 ~~~ql~wL~~~L~~~~~~~~vv~~hH~P~~~~~---------~~~d~~-------------~l~n~~~l~~ll~~~~~v~ 197 (275)
T PRK11148 140 SEYQLEWLERKLADAPERHTLVLLHHHPLPAGC---------AWLDQH-------------SLRNAHELAEVLAKFPNVK 197 (275)
T ss_pred CHHHHHHHHHHHhhCCCCCeEEEEcCCCCCCCc---------chhhcc-------------CCCCHHHHHHHHhcCCCce
Confidence 999999999988777777888888876654311 111100 001122334455554 457
Q ss_pred EEEECCccCCCcEEeccCCCCeEEEEeCceeecCC---------CCCCcEEEEEEEcCCcccCCcccccEEEeEEecccc
Q 010015 284 LVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG---------NLYPSFRLLSASNSALLNMSNLEEAVLTRLCFLPMQ 354 (520)
Q Consensus 284 lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g---------~~~Pgf~llsl~~~~~~~~~~~~~~~~t~~C~LP~q 354 (520)
++||||+|....... +++..+++||+|+++. ...|||+++.+.+++ .+.++.++++..
T Consensus 198 ~vl~GH~H~~~~~~~----~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~g---------~~~~~~~~~~~~ 264 (275)
T PRK11148 198 AILCGHIHQELDLDW----NGRRLLATPSTCVQFKPHCTNFTLDTVAPGWRELELHADG---------SLETEVHRLADT 264 (275)
T ss_pred EEEecccChHHhceE----CCEEEEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCCC---------cEEEEEEEcCCC
Confidence 999999999765544 6899999999997632 235899999998876 578888888763
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=218.94 Aligned_cols=171 Identities=57% Similarity=1.007 Sum_probs=137.3
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
++||||||++..+++..+. +..++.....|.++++.+..++...+||+|+++|||+|++.....++|.+.+++|.++|.
T Consensus 1 llvaDpql~~~~~~~~~~~-~~~~~~p~~~d~~~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~ 79 (171)
T cd07384 1 LLVADPQILDETSYPPRPK-IALRLTRFYTDAYMRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFF 79 (171)
T ss_pred CcccCccccCCCCCCCCch-hhhHHHHHhHHHHHHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhc
Confidence 5799999999988874332 234567888999999999999999999999999999999876666789888999999986
Q ss_pred cccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHH
Q 010015 134 LKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK 213 (520)
Q Consensus 134 ~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~ 213 (520)
..... ...+|+++|+||||+++...... ....++|+++|
T Consensus 80 ~~~~~-~~~~~~~~v~GNHD~g~~~~~~~-~~~~~~f~~~f--------------------------------------- 118 (171)
T cd07384 80 LPSNG-LEDIPVYYVPGNHDIGYGEVISF-PEVVDRFERYF--------------------------------------- 118 (171)
T ss_pred ccccc-cCCceEEEECCccccCCCCcccc-HHHHHHHHhhh---------------------------------------
Confidence 32000 02689999999999988643211 35677888877
Q ss_pred HhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCC
Q 010015 214 NVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 214 ~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~ 293 (520)
|+|+|.|.++ +++..+++++||||+|.+
T Consensus 119 -----------i~l~H~p~~~-----------------------------------------~~~~~~~~~~lsGH~H~~ 146 (171)
T cd07384 119 -----------ILLTHIPLYR-----------------------------------------LLDTIKPVLILSGHDHDQ 146 (171)
T ss_pred -----------eeEECCccHH-----------------------------------------HHhccCceEEEeCcccCC
Confidence 9999999642 344456789999999999
Q ss_pred CcEEeccCCCCeEEEEeCceeecCC
Q 010015 294 CTVSHESNHEHIKEHTVGTISWQQG 318 (520)
Q Consensus 294 c~~~h~~~~~~i~Eitv~S~S~~~g 318 (520)
|..+|.+..+.++|+||||+||.||
T Consensus 147 ~~~~~~~~~~~~~ei~v~S~s~~~~ 171 (171)
T cd07384 147 CEVVHSSKAGSVREITVKSFSWRMG 171 (171)
T ss_pred eEEEecCCCCCceEEeeccchhhcc
Confidence 9999987778899999999999986
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=220.53 Aligned_cols=165 Identities=29% Similarity=0.505 Sum_probs=130.8
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
++||||||.|.++|+ +..+..+++.+.+|.||++.++.++..++||.|+|||||+|++ |.+++||.++++||.++|.
T Consensus 1 l~vADPQi~d~~~~~--~~~~~~rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~-w~~D~ef~~~~~RF~~if~ 77 (193)
T cd08164 1 LALGDPQIEGDHKIE--NYGFKGRLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQ-WIDDEEFAKRADRYRRRFF 77 (193)
T ss_pred CcccCccccCCCCCC--CCcccceehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCC-cccHHHHHHHHHHHHHHhc
Confidence 478999999999885 3333356778899999999999999999999999999999875 8899999999999999985
Q ss_pred cccC------------CCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCC
Q 010015 134 LKSQ------------DRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPE 201 (520)
Q Consensus 134 ~~~~------------~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~ 201 (520)
.... ....++|++.|+||||+|++. ......++||+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~~~--~~~~~~i~RF~~~F--------------------------- 128 (193)
T cd08164 78 GRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGYGG--EVTEARIERFESLF--------------------------- 128 (193)
T ss_pred CCcccccccccccccccccCCceEEEECCcccCCCCC--ccchHHhhheheeE---------------------------
Confidence 3211 012368999999999999864 24556678888777
Q ss_pred CCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC
Q 010015 202 GNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK 281 (520)
Q Consensus 202 g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~ 281 (520)
|+|+|.|.+... ...+
T Consensus 129 -----------------------ilL~H~P~~~~~-----------------------------------------~~~~ 144 (193)
T cd08164 129 -----------------------ILLTHVPLYKIF-----------------------------------------LEGK 144 (193)
T ss_pred -----------------------EEEEcccceecc-----------------------------------------ccCC
Confidence 999999976410 0124
Q ss_pred CcEEEECCccCCCcEEeccC------------CCCeEEEEeCcee
Q 010015 282 PVLVLSGHDHDQCTVSHESN------------HEHIKEHTVGTIS 314 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~------------~~~i~Eitv~S~S 314 (520)
++++||||+|-.|.+.+... ...++|+||.|+.
T Consensus 145 ~dl~lSGHtHgGqi~~~~~~~~~~~~~~~~~~~~~~~e~tv~smm 189 (193)
T cd08164 145 PGLILTGHDHEGCDYQHPSNPSVTWATSLEESGNNVREYTLRSMM 189 (193)
T ss_pred CCEEEeCccCCCeEEEecCCCCCcccccccCCCCCceEEEehHhh
Confidence 68999999999999886522 2468999999973
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=224.19 Aligned_cols=231 Identities=20% Similarity=0.219 Sum_probs=154.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
||++++||+|+.+..... .. ... .+-..++++++.+ +..+||+||++|||++++...+++ .++.+.+
T Consensus 1 ~r~~~iSD~H~~~~~~~~--~~----~~~--~~~~~l~~~i~~i-~~~~~d~vv~~GDlv~~~~~~~~~----~~~~~~~ 67 (267)
T cd07396 1 FRFGIIADIQYADEDDTR--PR----YYR--NSLEKLEEAVEEW-NRESLDFVVQLGDIIDGDNARAEE----ALDAVLA 67 (267)
T ss_pred CeEEEEeccccccCCCcc--cc----hHH--HhHHHHHHHHHHH-HcCCCCEEEECCCeecCCCchHHH----HHHHHHH
Confidence 699999999987643321 10 000 0112245555544 445699999999999888432223 3444566
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCC--CC---------
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLD--GH--------- 199 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~--g~--------- 199 (520)
.+. ..++|++.+|||||...... ......+...++..+|+|..++++||+||+.... +.
T Consensus 68 ~l~------~l~~p~~~v~GNHD~~~~~~----~~~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~ 137 (267)
T cd07396 68 ILD------RLKGPVHHVLGNHDLYNPSR----EYLLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAEN 137 (267)
T ss_pred HHH------hcCCCEEEecCccccccccH----hhhhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhh
Confidence 665 36789999999999753321 0001123344567789999999999999996431 10
Q ss_pred ------------------CCCCCCHHHHHHHHHhhccC--CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCC
Q 010015 200 ------------------PEGNLAAATWDFVKNVSIDF--QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHS 259 (520)
Q Consensus 200 ------------------~~g~i~~~ql~wL~~ll~~~--~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~ 259 (520)
..|.+.++|++||++.+... .+.++|+++|+|++.... . +.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~---~--~~-------------- 198 (267)
T cd07396 138 ADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPEST---S--PH-------------- 198 (267)
T ss_pred HHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCC---C--cc--------------
Confidence 14678999999999976543 357899999999976321 0 00
Q ss_pred ccchhccccCHHHHHHHHHHh-CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 260 QEILYQNYITEESSNRLLDLI-KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 260 ~g~~yqn~ls~e~s~~LL~~l-~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
.+..+.+...++++.. +.+++||||+|......+ +++++++.||+|.+ +...|.|.++.++.+-
T Consensus 199 -----~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~----~gi~~~~~~a~~~~-~~~~~~~~~~~~~~~~ 263 (267)
T cd07396 199 -----GLLWNHEEVLSILRAYGCVKACISGHDHEGGYAQR----HGIHFLTLEGMVET-PPESNAFGVVIVYEDR 263 (267)
T ss_pred -----ccccCHHHHHHHHHhCCCEEEEEcCCcCCCCcccc----CCeeEEEechhhcC-CCCCCceEEEEEeCCc
Confidence 0011123344555553 347999999999976554 78999999999999 7778999999998873
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=213.09 Aligned_cols=225 Identities=24% Similarity=0.300 Sum_probs=150.0
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCC-CCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILP-FKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~-~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
||+++||+|+........... .....+.+.++.+... .+||+|+++|||++++ ..++|+ ++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~---------~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~---~~~~~~----~~~~ 64 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGV---------DTAASLEAVLAHINALHPRPDLVLVTGDLTDDG---SPESYE----RLRE 64 (240)
T ss_pred CEEEEeCCccCCCCcceecCc---------CHHHHHHHHHHHHHhcCCCCCEEEECccCCCCC---CHHHHH----HHHH
Confidence 689999999975421000000 0112244555444322 4899999999999987 445444 3555
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHH---hCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHH
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE---FGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAA 207 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~---Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ 207 (520)
.+. ..++|++.++||||.... ....|... .+..+|++++++++||++|+.. .+...+.+.++
T Consensus 65 ~l~------~~~~p~~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~-~~~~~~~~~~~ 129 (240)
T cd07402 65 LLA------ALPIPVYLLPGNHDDRAA--------MRAVFPELPPAPGFVQYVVDLGGWRLILLDSSV-PGQHGGELCAA 129 (240)
T ss_pred HHh------hcCCCEEEeCCCCCCHHH--------HHHhhccccccccccceeEecCCEEEEEEeCCC-CCCcCCEECHH
Confidence 554 357899999999996321 11222222 2345788999999999999963 34445678999
Q ss_pred HHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh-CCcEEE
Q 010015 208 TWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI-KPVLVL 286 (520)
Q Consensus 208 ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l-~p~lVf 286 (520)
|++||++.+....++++|+++|+|++.... . ..+ . + ...+.+...++++.. +++++|
T Consensus 130 ql~wL~~~L~~~~~~~~il~~H~pp~~~~~---~------~~~----------~--~-~~~~~~~~~~~l~~~~~v~~v~ 187 (240)
T cd07402 130 QLDWLEAALAEAPDKPTLVFLHHPPFPVGI---A------WMD----------A--I-GLRNAEALAAVLARHPNVRAIL 187 (240)
T ss_pred HHHHHHHHHHhCCCCCEEEEECCCCccCCc---h------hhh----------h--h-hCCCHHHHHHHHhcCCCeeEEE
Confidence 999999988777788999999999976421 0 000 0 0 001123344456655 568999
Q ss_pred ECCccCCCcEEeccCCCCeEEEEeCceeecCCC---------CCCcEEEEEEEcCC
Q 010015 287 SGHDHDQCTVSHESNHEHIKEHTVGTISWQQGN---------LYPSFRLLSASNSA 333 (520)
Q Consensus 287 sGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~---------~~Pgf~llsl~~~~ 333 (520)
|||+|....... ++++.+++||+|++..- ..|||..++|..++
T Consensus 188 ~GH~H~~~~~~~----~g~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (240)
T cd07402 188 CGHVHRPIDGSW----GGIPLLTAPSTCHQFAPDLDDFALDALAPGYRALSLHEDG 239 (240)
T ss_pred ECCcCchHHeEE----CCEEEEEcCcceeeecCCCCcccccccCCCCcEEEEecCC
Confidence 999999877665 68999999999966431 25799999987653
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-23 Score=191.86 Aligned_cols=156 Identities=39% Similarity=0.720 Sum_probs=124.1
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
++|||+||++.... ..++++..|.++.+.+..++...+||+|+++||+++++.+.++++|.+...+|.+++.
T Consensus 1 ~~isD~HL~~~~~~--------~~l~~~~~~~~~~~~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 72 (156)
T cd08165 1 MFLADTHLLGSILG--------HWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFG 72 (156)
T ss_pred CccccchhcCCccc--------HHHHHHhhhHHHHHHHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhc
Confidence 47999999754431 1356777888999999988889999999999999998876667778777888888876
Q ss_pred cccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHH
Q 010015 134 LKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVK 213 (520)
Q Consensus 134 ~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~ 213 (520)
. ..+.|+++++||||++... .......++|++.|
T Consensus 73 ~-----~~~~~i~~v~GNHD~~~~~--~~~~~~~~~~~~~~--------------------------------------- 106 (156)
T cd08165 73 H-----PPDLPLHVVVGNHDIGFHY--EMTTYKLERFEKVF--------------------------------------- 106 (156)
T ss_pred c-----CCCCeEEEEcCCCCcCCCC--ccCHHHHHHHHHHe---------------------------------------
Confidence 3 2468999999999987643 23455566777665
Q ss_pred HhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCC
Q 010015 214 NVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 214 ~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~ 293 (520)
|+|+|.|.+. ++...++.++||||+|..
T Consensus 107 -----------~~l~H~p~~~-----------------------------------------~~~~~~~~~~l~GH~H~~ 134 (156)
T cd08165 107 -----------ILLQHFPLYR-----------------------------------------LLQWLKPRLVLSGHTHSF 134 (156)
T ss_pred -----------eeeeCChHHH-----------------------------------------HHHhhCCCEEEEcccCCC
Confidence 8999999632 334456789999999999
Q ss_pred CcEEeccCCCCeEEEEeCceeecCC
Q 010015 294 CTVSHESNHEHIKEHTVGTISWQQG 318 (520)
Q Consensus 294 c~~~h~~~~~~i~Eitv~S~S~~~g 318 (520)
|.+.|. +++.|+|+||+||+++
T Consensus 135 ~~~~~~---~~~~e~~~~~~~~~~~ 156 (156)
T cd08165 135 CEVTHP---DGTPEVTVPSFSWRNR 156 (156)
T ss_pred ceeEEE---CCEEEEEEecceecCC
Confidence 999886 8999999999999864
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-21 Score=194.70 Aligned_cols=233 Identities=19% Similarity=0.197 Sum_probs=140.6
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhC-CCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASIL-PFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~-~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
..++|+++++|.|.....+ ++.+..+.. ..+||+||++||+++++...+.++|....+
T Consensus 2 ~~~~~f~v~gD~~~~~~~~---------------------~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~ 60 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNS---------------------TNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMR 60 (294)
T ss_pred CCcEEEEEEEECCCCCCCc---------------------HHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHH
Confidence 4679999999999752111 111222222 578999999999997653322245555433
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHH------HHhCCcceEEEeCCEEEEEEeCCCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE------KEFGKRNYRFTVGKVEFIVVDAQTLDGHP 200 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~------~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~ 200 (520)
.+..+. ..+|+++++||||...............++. ...+..+|+|++|+++||+|||.....
T Consensus 61 ~~~~~~--------~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~-- 130 (294)
T cd00839 61 QIEPLA--------SYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFY-- 130 (294)
T ss_pred HHHHHH--------hcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccc--
Confidence 333332 4689999999999865432110000000010 111245789999999999999964321
Q ss_pred CCCCCHHHHHHHHHhhccCCC---CCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHH
Q 010015 201 EGNLAAATWDFVKNVSIDFQL---LPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLL 277 (520)
Q Consensus 201 ~g~i~~~ql~wL~~ll~~~~~---~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL 277 (520)
.+.+..+|++||++.++.... ..+|+++|+|++......+. . ..+.-..+....|+
T Consensus 131 ~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~--~-------------------~~~~~~~~~l~~ll 189 (294)
T cd00839 131 GDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDD--C-------------------IEGEKMRAALEDLF 189 (294)
T ss_pred cCCCCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccc--c-------------------chhHHHHHHHHHHH
Confidence 346788999999997654332 34899999999874321000 0 00000112344677
Q ss_pred HHhCCcEEEECCccCCCcEEec------------cCCCCeEEEEeCceeecCC---------------CCCCcEEEEEEE
Q 010015 278 DLIKPVLVLSGHDHDQCTVSHE------------SNHEHIKEHTVGTISWQQG---------------NLYPSFRLLSAS 330 (520)
Q Consensus 278 ~~l~p~lVfsGH~H~~c~~~h~------------~~~~~i~Eitv~S~S~~~g---------------~~~Pgf~llsl~ 330 (520)
+..+.+++||||+|.+.+...- ....++..+++|+-+-..+ ....||..+++.
T Consensus 190 ~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 269 (294)
T cd00839 190 YKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVH 269 (294)
T ss_pred HHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEE
Confidence 7778899999999998765421 1224677888776542111 123688888887
Q ss_pred cC
Q 010015 331 NS 332 (520)
Q Consensus 331 ~~ 332 (520)
++
T Consensus 270 ~~ 271 (294)
T cd00839 270 NS 271 (294)
T ss_pred ec
Confidence 65
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=190.12 Aligned_cols=226 Identities=23% Similarity=0.297 Sum_probs=143.1
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcC-CCCCCC-CHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHF-DGGPYL-SDEEWQESLNRF 128 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~-d~G~~~-s~~e~~~~~~Rf 128 (520)
++|++++|....+... . . .+.+.+..++...+||+||++||++ ++|... .+++|.+ .|
T Consensus 1 ~~f~~~gD~g~~~~~~----------~-~------~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~---~~ 60 (277)
T cd07378 1 LRFLALGDWGGGGTAG----------Q-K------AVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFET---TF 60 (277)
T ss_pred CeEEEEeecCCCCCHH----------H-H------HHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHH---HH
Confidence 4799999998652110 0 0 1223333344457899999999997 444321 1233433 24
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-------HhCCcceEEEeC------CEEEEEEeCCC
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-------EFGKRNYRFTVG------KVEFIVVDAQT 195 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-------~Fg~~ny~~~ig------~~~fV~LDS~~ 195 (520)
.+++... ..++|+++++||||.......+ ..|.. .++..+|++..+ +++||+|||..
T Consensus 61 ~~~~~~~----~~~~P~~~v~GNHD~~~~~~~~------~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~ 130 (277)
T cd07378 61 EDVYSAP----SLQVPWYLVLGNHDYSGNVSAQ------IDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVP 130 (277)
T ss_pred HHHccch----hhcCCeEEecCCcccCCCchhe------eehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChh
Confidence 4555421 2578999999999986432100 11111 134457888887 79999999976
Q ss_pred CCCC----------CCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhc
Q 010015 196 LDGH----------PEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQ 265 (520)
Q Consensus 196 l~g~----------~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yq 265 (520)
+... ..+.+..+|++||++.+.+....++||++|+|++..... + .
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~--~---~-------------------- 185 (277)
T cd07378 131 LCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAASTADWKIVVGHHPIYSSGEH--G---P-------------------- 185 (277)
T ss_pred HcCccccccccccCcchhhHHHHHHHHHHHHHhcCCCeEEEEeCccceeCCCC--C---C--------------------
Confidence 5321 245678999999999887766688999999999863210 0 0
Q ss_pred cccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC----------------CCCCcEEEEEE
Q 010015 266 NYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG----------------NLYPSFRLLSA 329 (520)
Q Consensus 266 n~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g----------------~~~Pgf~llsl 329 (520)
+....+....+++..+.+++||||+|.+...... ..++.++++|+.+...+ ....||..+++
T Consensus 186 ~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~--~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v 263 (277)
T cd07378 186 TSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDD--GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL 263 (277)
T ss_pred cHHHHHHHHHHHHHcCCCEEEeCCcccceeeecC--CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE
Confidence 0000122345666667799999999998766542 24899999988763211 12368888888
Q ss_pred EcCC
Q 010015 330 SNSA 333 (520)
Q Consensus 330 ~~~~ 333 (520)
.++.
T Consensus 264 ~~~~ 267 (277)
T cd07378 264 TKEE 267 (277)
T ss_pred ecCE
Confidence 8763
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=181.32 Aligned_cols=192 Identities=21% Similarity=0.175 Sum_probs=115.1
Q ss_pred EEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCC------CHHHHHHHHH
Q 010015 53 VAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYL------SDEEWQESLN 126 (520)
Q Consensus 53 ilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~------s~~e~~~~~~ 126 (520)
|+++||+|++.... +. . .. + .+.+...++..+||+|+++||++|..... ...+|.++++
T Consensus 2 ~~~iSDlH~g~~~~----~~-~-----~~----~-~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHP----PN-R-----AQ----D-ETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCc----hh-h-----hh----H-HHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHH
Confidence 78999999974321 10 0 00 0 11222345677999999999999876421 2334544333
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh---CCcce--EEE--eCCEEEEEEeCCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF---GKRNY--RFT--VGKVEFIVVDAQTLDGH 199 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F---g~~ny--~~~--ig~~~fV~LDS~~l~g~ 199 (520)
.+.+.-. ....|++.++||||+....... ...+.|.++. +...+ .+. .|+++||+|||....+.
T Consensus 67 ~~~~~~~------~~~~p~~~v~GNHD~~~~~~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~ 137 (256)
T cd07401 67 ILKESSV------INKEKWFDIRGNHDLFNIPSLD---SENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGP 137 (256)
T ss_pred HHHHhCC------CCcceEEEeCCCCCcCCCCCcc---chhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCC
Confidence 3322111 1358999999999984221111 1123344433 33322 222 49999999999754332
Q ss_pred C-----CCCCCHHHHHHHHHhhccC-CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHH
Q 010015 200 P-----EGNLAAATWDFVKNVSIDF-QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESS 273 (520)
Q Consensus 200 ~-----~g~i~~~ql~wL~~ll~~~-~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s 273 (520)
. .|.+.++|++||++.+.+. ..+++||++|+|+...... +. . .....
T Consensus 138 ~~~~~~~g~l~~~ql~wL~~~L~~~~~~~~~IV~~HhP~~~~~~~-~~-----------------------~---~~~~~ 190 (256)
T cd07401 138 KRPFNFFGSLDKKLLDRLEKELEKSTNSNYTIWFGHYPTSTIISP-SA-----------------------K---SSSKF 190 (256)
T ss_pred CCCCceeccCCHHHHHHHHHHHHhcccCCeEEEEEcccchhccCC-Cc-----------------------c---hhHHH
Confidence 2 3778999999999866543 3567999999998642110 00 0 00114
Q ss_pred HHHHHHhCCcEEEECCccCCCc
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCT 295 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~ 295 (520)
.++++..+++++||||+|.+..
T Consensus 191 ~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 191 KDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHHhcCCcEEEeCCccCCCc
Confidence 4566777779999999999866
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=169.30 Aligned_cols=197 Identities=21% Similarity=0.272 Sum_probs=118.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
|++++++|+|+..... +. .+.+ .+.+..+ .+...+||+|+++||+++.+. ..++|....+.++.
T Consensus 1 f~~~~~~D~q~~~~~~----~~----~~~~-----~~~~i~~-~~~~~~~d~iv~~GDl~~~~~--~~~~~~~~~~~~~~ 64 (214)
T cd07399 1 FTLAVLPDTQYYTESY----PE----VFDA-----QTDWIVD-NAEALNIAFVLHLGDIVDDGD--NDAEWEAADKAFAR 64 (214)
T ss_pred CEEEEecCCCcCCcCC----HH----HHHH-----HHHHHHH-HHHHcCCCEEEECCCccCCCC--CHHHHHHHHHHHHH
Confidence 6899999999864311 11 1111 1222222 234568999999999999872 25566654433333
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHH
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWD 210 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~ 210 (520)
+ . ..++|+++++|||| .++.+|+. .+.+|++
T Consensus 65 l-~------~~~~p~~~~~GNHD---------------------------------~~~~ld~~---------~~~~ql~ 95 (214)
T cd07399 65 L-D------KAGIPYSVLAGNHD---------------------------------LVLALEFG---------PRDEVLQ 95 (214)
T ss_pred H-H------HcCCcEEEECCCCc---------------------------------chhhCCCC---------CCHHHHH
Confidence 2 1 24689999999999 13444542 3588999
Q ss_pred HHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhcccc--CHHHHHHHHHHh-CCcEEEE
Q 010015 211 FVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYI--TEESSNRLLDLI-KPVLVLS 287 (520)
Q Consensus 211 wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~l--s~e~s~~LL~~l-~p~lVfs 287 (520)
||++.+++.+++|+|+++|+|++.... ..+. ..|.+.+ ..+...+|++.. +.++|||
T Consensus 96 WL~~~L~~~~~~~~iv~~H~p~~~~~~----~~~~----------------~~~~~~~~~~~~~~~~ll~~~~~V~~v~~ 155 (214)
T cd07399 96 WANEVLKKHPDRPAILTTHAYLNCDDS----RPDS----------------IDYDSDVNDGQQIWDKLVKKNDNVFMVLS 155 (214)
T ss_pred HHHHHHHHCCCCCEEEEecccccCCCC----cCcc----------------cccccccccHHHHHHHHHhCCCCEEEEEc
Confidence 999988877789999999999985321 0000 0011000 111233455555 3478999
Q ss_pred CCccCCCcEEe---ccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 288 GHDHDQCTVSH---ESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 288 GH~H~~c~~~h---~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
||+|.+..... ...++.+.++-+.--.-.+|. +|.|+++++++++
T Consensus 156 GH~H~~~~~~~~~~~~~g~~v~~~~~~~q~~~~~g-~~~~r~~~f~~~~ 203 (214)
T cd07399 156 GHVHGAGRTTLVSVGDAGRTVHQMLADYQGEPNGG-NGFLRLLEFDPDN 203 (214)
T ss_pred cccCCCceEEEcccCCCCCEeeEEeecccCCCCCC-cceEEEEEEecCC
Confidence 99999876655 111223433332221111233 6899999999885
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=169.18 Aligned_cols=167 Identities=15% Similarity=0.132 Sum_probs=108.0
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCC--
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGK-- 176 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~-- 176 (520)
+||+|+++|||++.+. .+++...++ .+. ....|+++|+||||..... .+++++.+..
T Consensus 41 ~~D~viiaGDl~~~~~---~~~~~~~l~----~l~------~l~~~v~~V~GNHD~~~~~--------~~~~~~~l~~~~ 99 (232)
T cd07393 41 PEDIVLIPGDISWAMK---LEEAKLDLA----WID------ALPGTKVLLKGNHDYWWGS--------ASKLRKALEESR 99 (232)
T ss_pred CCCEEEEcCCCccCCC---hHHHHHHHH----HHH------hCCCCeEEEeCCccccCCC--------HHHHHHHHHhcC
Confidence 8999999999997662 223333222 222 2334799999999973221 2334333322
Q ss_pred ----cceEEEeCCEEEEEEeCCCCCCCC------------CCCCCHHHHHHHHHhhccCC----CCCeEEEEccCCCCCC
Q 010015 177 ----RNYRFTVGKVEFIVVDAQTLDGHP------------EGNLAAATWDFVKNVSIDFQ----LLPRVLLTHIPLYRRD 236 (520)
Q Consensus 177 ----~ny~~~ig~~~fV~LDS~~l~g~~------------~g~i~~~ql~wL~~ll~~~~----~~p~ILltH~PL~~~~ 236 (520)
.+.++.++++.|++++.-++++.. .+.+..++++||++.+...+ ..++|+++|+|++...
T Consensus 100 ~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~ 179 (232)
T cd07393 100 LALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN 179 (232)
T ss_pred eEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC
Confidence 156677899999998743232211 23445678999998665422 2479999999987532
Q ss_pred CCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEE-eccCCCCeEEEEeCceee
Q 010015 237 ETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVS-HESNHEHIKEHTVGTISW 315 (520)
Q Consensus 237 ~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~-h~~~~~~i~Eitv~S~S~ 315 (520)
. ..+....+++..+.+++|+||+|...... .....++++.+++++.|+
T Consensus 180 ~-------------------------------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~ 228 (232)
T cd07393 180 G-------------------------------DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYL 228 (232)
T ss_pred C-------------------------------CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhc
Confidence 1 00123456666677999999999987543 222237899999999999
Q ss_pred cC
Q 010015 316 QQ 317 (520)
Q Consensus 316 ~~ 317 (520)
|+
T Consensus 229 ~~ 230 (232)
T cd07393 229 NF 230 (232)
T ss_pred Cc
Confidence 86
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.9e-18 Score=172.57 Aligned_cols=207 Identities=16% Similarity=0.105 Sum_probs=124.4
Q ss_pred HHHHHHhh-CCCCCCEEEEcCCcCCCCCCCCHHHHHH--HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCC--
Q 010015 88 RRAFFASI-LPFKPDVILFLGDHFDGGPYLSDEEWQE--SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSH-- 162 (520)
Q Consensus 88 ~r~~~~~~-~~~~PD~VI~lGDL~d~G~~~s~~e~~~--~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~-- 162 (520)
.++++.+. ...+||+||++||+++.+.+....+... ..+.+.+.+... ..++|++.++||||.........
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~pv~~~~GNHD~~p~~~~~~~~ 131 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKA----FPDTPVYPALGNHDSYPVNQFPPNN 131 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHh----CCCCCEEEcCCCCCCCcccccCCcc
Confidence 44444432 2358999999999998874322111111 112222223211 35789999999999754321111
Q ss_pred -CHHHHHHHHHHhC-------------CcceEEE-eCCEEEEEEeCCCCCCCC------CCCCCHHHHHHHHHhhccC--
Q 010015 163 -KPEIVRRYEKEFG-------------KRNYRFT-VGKVEFIVVDAQTLDGHP------EGNLAAATWDFVKNVSIDF-- 219 (520)
Q Consensus 163 -~~~~~~rf~~~Fg-------------~~ny~~~-ig~~~fV~LDS~~l~g~~------~g~i~~~ql~wL~~ll~~~-- 219 (520)
.....+.+.+.|+ ..+|++. .++++||+|||....... ......+|++||++.+++.
T Consensus 132 ~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~ 211 (296)
T cd00842 132 SPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ 211 (296)
T ss_pred cccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 0111122222221 2356777 799999999997543221 2234588999999977653
Q ss_pred CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC--CcEEEECCccCCCcEE
Q 010015 220 QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK--PVLVLSGHDHDQCTVS 297 (520)
Q Consensus 220 ~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~--p~lVfsGH~H~~c~~~ 297 (520)
++.+++|++|+|+.... |... + ...+....|++.++ ..++|+||+|......
T Consensus 212 ~~~~v~I~~HiPp~~~~---~~~~---~--------------------~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 212 AGEKVWIIGHIPPGVNS---YDTL---E--------------------NWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred CCCeEEEEeccCCCCcc---cccc---h--------------------HHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 35779999999997632 1100 0 00122345666665 3689999999876655
Q ss_pred eccC----CCCeEEEEeCceeecCCCCCCcEE
Q 010015 298 HESN----HEHIKEHTVGTISWQQGNLYPSFR 325 (520)
Q Consensus 298 h~~~----~~~i~Eitv~S~S~~~g~~~Pgf~ 325 (520)
.... ......+..||++-..++ +|||+
T Consensus 266 ~~~~~~~~~~~~~~~~~psitp~~~~-nP~~r 296 (296)
T cd00842 266 FYDDNDTGEPINVALIAPSVTPYSGN-NPGFR 296 (296)
T ss_pred EeCCCCCCCceEEEEecCccCcCCCC-CCCCC
Confidence 4322 235678889999977776 79985
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=178.88 Aligned_cols=209 Identities=21% Similarity=0.220 Sum_probs=125.8
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
...+++|++++|.|... .. ++.+.. +...+||+|+++|||++.+. ....|..
T Consensus 136 ~~~~~~f~v~GDlG~~~---~~-------------------~~tl~~-i~~~~pD~vl~~GDl~y~~~--~~~~wd~--- 187 (427)
T PLN02533 136 SKFPIKFAVSGDLGTSE---WT-------------------KSTLEH-VSKWDYDVFILPGDLSYANF--YQPLWDT--- 187 (427)
T ss_pred CCCCeEEEEEEeCCCCc---cc-------------------HHHHHH-HHhcCCCEEEEcCccccccc--hHHHHHH---
Confidence 34689999999987421 10 011112 23458999999999997652 2334544
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCccccc--CCCHHHHHHHHHHh---C---CcceEEEeCCEEEEEEeCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALL--SHKPEIVRRYEKEF---G---KRNYRFTVGKVEFIVVDAQTLDG 198 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~--~~~~~~~~rf~~~F---g---~~ny~~~ig~~~fV~LDS~~l~g 198 (520)
|.+.+..- ...+|+++++||||....... ........+|..-+ | ..+|+|++|+++||+|||.. +
T Consensus 188 -f~~~i~~l----~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~-~- 260 (427)
T PLN02533 188 -FGRLVQPL----ASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYT-D- 260 (427)
T ss_pred -HHHHhhhH----hhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCc-c-
Confidence 33222211 246899999999998642100 00011123333222 1 24689999999999999952 1
Q ss_pred CCCCCCCHHHHHHHHHhhccCC--CCC-eEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHH
Q 010015 199 HPEGNLAAATWDFVKNVSIDFQ--LLP-RVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNR 275 (520)
Q Consensus 199 ~~~g~i~~~ql~wL~~ll~~~~--~~p-~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~ 275 (520)
.....+|++||++.+++.. ..| +|++.|+|+|.......+ + + . .....+....
T Consensus 261 ---~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~---~---------------~--~-~~~~r~~le~ 316 (427)
T PLN02533 261 ---FEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG---E---------------K--E-SVGMKESMET 316 (427)
T ss_pred ---ccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCC---c---------------c--h-hHHHHHHHHH
Confidence 1236789999999765432 334 889999999964210000 0 0 0 0001234567
Q ss_pred HHHHhCCcEEEECCccCCCcEEecc----CCCCeEEEEeCcee
Q 010015 276 LLDLIKPVLVLSGHDHDQCTVSHES----NHEHIKEHTVGTIS 314 (520)
Q Consensus 276 LL~~l~p~lVfsGH~H~~c~~~h~~----~~~~i~Eitv~S~S 314 (520)
|++..+++++||||+|.|.+....+ ...+...+++|+-.
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG 359 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGG 359 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCc
Confidence 8888899999999999987643211 12456678777754
|
|
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.6e-16 Score=165.10 Aligned_cols=132 Identities=18% Similarity=0.239 Sum_probs=93.5
Q ss_pred cceEEE-eCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhc
Q 010015 177 RNYRFT-VGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVR 255 (520)
Q Consensus 177 ~ny~~~-ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~ 255 (520)
.+|+|+ .++++||+|||....+...|.+.++|++||++.+++.+++++||++|||++..... ..+ +..
T Consensus 292 ~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~---~~D--p~~------ 360 (496)
T TIGR03767 292 GYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNE---LTD--PVD------ 360 (496)
T ss_pred ceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcCCCCCEEEEECCCCcccccc---ccc--ccc------
Confidence 479999 89999999999754467788999999999999888777889999999999874211 000 000
Q ss_pred cCCCccchhccccCHHHHHHHHHHhC----CcEEEECCccCCCcEEecc-----CCCCeEEEEeCceeecCCCCCC-cEE
Q 010015 256 TGHSQEILYQNYITEESSNRLLDLIK----PVLVLSGHDHDQCTVSHES-----NHEHIKEHTVGTISWQQGNLYP-SFR 325 (520)
Q Consensus 256 ~~~~~g~~yqn~ls~e~s~~LL~~l~----p~lVfsGH~H~~c~~~h~~-----~~~~i~Eitv~S~S~~~g~~~P-gf~ 325 (520)
.+... . +.++|++.++ ..+|||||+|......|.. ++.++.||+++|.- ..| =|+
T Consensus 361 ----pg~~~---~---n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlv-----dfPq~~R 425 (496)
T TIGR03767 361 ----PGEKR---H---LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHI-----DFPQQGR 425 (496)
T ss_pred ----ccccc---c---CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccc-----cCCCCce
Confidence 00001 1 2344555553 3689999999987666642 23488999999853 234 799
Q ss_pred EEEEEcCCc
Q 010015 326 LLSASNSAL 334 (520)
Q Consensus 326 llsl~~~~~ 334 (520)
++++..+.+
T Consensus 426 i~Ei~~n~d 434 (496)
T TIGR03767 426 IIELADNQD 434 (496)
T ss_pred EEEEEeCCC
Confidence 999987753
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=150.03 Aligned_cols=154 Identities=17% Similarity=0.209 Sum_probs=98.5
Q ss_pred CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHH-HHh
Q 010015 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE-KEF 174 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~-~~F 174 (520)
...+||+||++||+++.+ +.+++. ++ +.+. ..+.|+++++||||.... .+.+. ..+
T Consensus 20 ~~~~~D~vv~~GDl~~~~---~~~~~~----~~-~~l~------~~~~p~~~v~GNHD~~~~---------~~~~~~~~~ 76 (188)
T cd07392 20 KAEEADAVIVAGDITNFG---GKEAAV----EI-NLLL------AIGVPVLAVPGNCDTPEI---------LGLLTSAGL 76 (188)
T ss_pred hccCCCEEEECCCccCcC---CHHHHH----HH-HHHH------hcCCCEEEEcCCCCCHHH---------HHhhhcCcE
Confidence 456899999999999987 443332 23 3333 367899999999995211 11111 011
Q ss_pred CCcceEEEeCCEEEEEEeCCC-CCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCC-CCCCCCCCCCCcccchh
Q 010015 175 GKRNYRFTVGKVEFIVVDAQT-LDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRR-DETPCGPHRSSPIINQR 252 (520)
Q Consensus 175 g~~ny~~~ig~~~fV~LDS~~-l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~-~~~~Cg~~r~~~~~~~~ 252 (520)
...+..+.++++.|+++|+.. ......+.+.+++++|+ +.+.....++.|+++|+|++.. .+..+.
T Consensus 77 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~~~~~~ilv~H~pp~~~~~d~~~~----------- 144 (188)
T cd07392 77 NLHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNLLAKNLILVTHAPPYGTAVDRVSG----------- 144 (188)
T ss_pred ecCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhccCCCCeEEEECCCCcCCcccccCC-----------
Confidence 122456778999999999742 22233456788899998 3333445688999999999863 110000
Q ss_pred hhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcE
Q 010015 253 IVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTV 296 (520)
Q Consensus 253 ~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~ 296 (520)
. .+ ...+...++++.++|+++||||+|.....
T Consensus 145 --------~---~~-~g~~~l~~li~~~~~~~~l~GH~H~~~~~ 176 (188)
T cd07392 145 --------G---FH-VGSKAIRKFIEERQPLLCICGHIHESRGV 176 (188)
T ss_pred --------C---Cc-cCCHHHHHHHHHhCCcEEEEeccccccce
Confidence 0 00 12234566778889999999999997543
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=156.59 Aligned_cols=202 Identities=16% Similarity=0.090 Sum_probs=115.9
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
||+++||+|+. ...+ ..+..+.+.+..+ ...+||+|+++|||++.. ++..+.++.+.+.
T Consensus 1 ki~~iSDlH~~-~~~~--------------~~~~~l~~~~~~~-~~~~~d~vv~~GDl~~~~-----~~~~~~~~~l~~~ 59 (239)
T TIGR03729 1 KIAFSSDLHID-LNHF--------------DTEEMLETLAQYL-KKQKIDHLHIAGDISNDF-----QRSLPFIEKLQEL 59 (239)
T ss_pred CEEEEEeecCC-CCCC--------------CHHHHHHHHHHHH-HhcCCCEEEECCccccch-----hhHHHHHHHHHHh
Confidence 58999999984 1111 0111234444333 345799999999999864 1111222222221
Q ss_pred hccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-----CcceEEEeCCEEEEEEeCCC-----------
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-----KRNYRFTVGKVEFIVVDAQT----------- 195 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-----~~ny~~~ig~~~fV~LDS~~----------- 195 (520)
...|+++++||||...+. .. +.+.+.++ .....+..++++|++++.-.
T Consensus 60 ---------~~~pv~~v~GNHD~~~~~----~~---~~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~ 123 (239)
T TIGR03729 60 ---------KGIKVTFNAGNHDMLKDL----TY---EEIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSK 123 (239)
T ss_pred ---------cCCcEEEECCCCCCCCCC----CH---HHHHhccchhhhcccccccCCCceEEEeeccceecccccccCHH
Confidence 357999999999963121 11 11222221 11222334889999998310
Q ss_pred ---------------CCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCC-CCCCCCCCCcccchhhhccCCC
Q 010015 196 ---------------LDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDE-TPCGPHRSSPIINQRIVRTGHS 259 (520)
Q Consensus 196 ---------------l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~-~~Cg~~r~~~~~~~~~~~~~~~ 259 (520)
..+...+.+.+++++||++.+.+..++++||++|+|+.+..- ..++.. .+
T Consensus 124 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~~~---~~----------- 189 (239)
T TIGR03729 124 EILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMDHR---RF----------- 189 (239)
T ss_pred HHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCCCc---ch-----------
Confidence 011112345678899999988777778999999999875311 011100 00
Q ss_pred ccchhcc-ccCHHHHHHHHHHhCCcEEEECCccCCCc-EEeccCCCCeEEEEeC
Q 010015 260 QEILYQN-YITEESSNRLLDLIKPVLVLSGHDHDQCT-VSHESNHEHIKEHTVG 311 (520)
Q Consensus 260 ~g~~yqn-~ls~e~s~~LL~~l~p~lVfsGH~H~~c~-~~h~~~~~~i~Eitv~ 311 (520)
...+ ....+...++++..++++++|||+|.... ... ++++.++++
T Consensus 190 ---~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~~~i----~~~~~~~~~ 236 (239)
T TIGR03729 190 ---DMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGPLTI----GGTTYHNRP 236 (239)
T ss_pred ---hhhhhccChHHHHHHHHHhCCCEEEECCccCCCCCEEE----CCEEEEecC
Confidence 0011 12224455677777899999999999864 332 677777654
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.7e-16 Score=155.19 Aligned_cols=185 Identities=24% Similarity=0.285 Sum_probs=116.0
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
++|++|||+|+..... .++..+.+.+ +.++..+||+||++|||++.| .+.+|.. +++
T Consensus 1 ~~i~~isD~H~~~~~~---------------~~~~~~~~~~-~~i~~~~~D~~v~tGDl~~~~---~~~~~~~----~~~ 57 (301)
T COG1409 1 MRIAHISDLHLGALGV---------------DSEELLEALL-AAIEQLKPDLLVVTGDLTNDG---EPEEYRR----LKE 57 (301)
T ss_pred CeEEEEecCccccccc---------------chHHHHHHHH-HHHhcCCCCEEEEccCcCCCC---CHHHHHH----HHH
Confidence 4899999999974111 0111223333 334678899999999999997 5666554 444
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEE---e-CCEEEEEEeCCCCCCCCCCCCCH
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFT---V-GKVEFIVVDAQTLDGHPEGNLAA 206 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~---i-g~~~fV~LDS~~l~g~~~g~i~~ 206 (520)
.+... ....|++++|||||..... ...|...+...+.... . ++++++++|+. ..+...|.+..
T Consensus 58 ~l~~~----~~~~~~~~vpGNHD~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~G~~~~ 124 (301)
T COG1409 58 LLARL----ELPAPVIVVPGNHDARVVN--------GEAFSDQFFNRYAVLVGACSSGGWRVIGLDSS-VPGVPLGRLGA 124 (301)
T ss_pred HHhhc----cCCCceEeeCCCCcCCchH--------HHHhhhhhcccCcceEeeccCCceEEEEecCC-CCCCCCCEECH
Confidence 43311 3678999999999975432 2334445544332222 2 67899999995 55666788999
Q ss_pred HHHHHHHHhhccCCCC---CeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC--
Q 010015 207 ATWDFVKNVSIDFQLL---PRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK-- 281 (520)
Q Consensus 207 ~ql~wL~~ll~~~~~~---p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~-- 281 (520)
.|++|+++.+...+.. ..|+++|+|+...... . .. ....+......++....
T Consensus 125 ~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~---~-~~-------------------~~l~~~~~~~~~~~~~~~~ 181 (301)
T COG1409 125 EQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTG---V-DR-------------------VALRDAGELLDVLIAHGND 181 (301)
T ss_pred HHHHHHHHHHHhCccccCceEEEecCCCCCCCCCc---c-ce-------------------eeeecchhHHHHHHhcCCc
Confidence 9999999977655443 3455555655542210 0 00 01112223444566666
Q ss_pred CcEEEECCccCCC
Q 010015 282 PVLVLSGHDHDQC 294 (520)
Q Consensus 282 p~lVfsGH~H~~c 294 (520)
.++||+||+|..+
T Consensus 182 v~~vl~GH~H~~~ 194 (301)
T COG1409 182 VRLVLSGHIHLAA 194 (301)
T ss_pred eEEEEeCcccccc
Confidence 7899999999984
|
|
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=162.54 Aligned_cols=234 Identities=16% Similarity=0.149 Sum_probs=144.3
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCC-CCHHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY-LSDEEWQESLN 126 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~-~s~~e~~~~~~ 126 (520)
+..+|++.++|.-- + ++. +.. ..+.+.......++|+|+.+||-+++|.. ..|+.|++
T Consensus 24 ~~~l~F~~vGDwG~-g--~~~-----------Q~~----VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~--- 82 (394)
T PTZ00422 24 KAQLRFASLGNWGT-G--SKQ-----------QKL----VASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKH--- 82 (394)
T ss_pred CCeEEEEEEecCCC-C--chh-----------HHH----HHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHh---
Confidence 35699999999872 1 111 111 13334444556799999999999977743 45666665
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHH-----------H-------HHHHhCCc-ceEE----Ee
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVR-----------R-------YEKEFGKR-NYRF----TV 183 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~-----------r-------f~~~Fg~~-ny~~----~i 183 (520)
.|.+++..+.. .+++|+|.++||||...+...++... .. . +.+..-|. +|.+ ..
T Consensus 83 ~FE~vY~~~s~--~L~~Pwy~vLGNHDy~Gn~~AQi~r~-~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~ 159 (394)
T PTZ00422 83 CFENVYSEESG--DMQIPFFTVLGQADWDGNYNAELLKG-QNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTD 159 (394)
T ss_pred hHhhhccCcch--hhCCCeEEeCCcccccCCchhhhccc-cccccccccccccccccccccCCCccCCchhheeeeeeec
Confidence 47777765411 26799999999999743322222110 00 0 01111121 2322 22
Q ss_pred -------------CCEEEEEEeCCCCCCCC-CCCCCHHHHHHHHHhhc--cCCCCCeEEEEccCCCCCCCCCCCCCCCCc
Q 010015 184 -------------GKVEFIVVDAQTLDGHP-EGNLAAATWDFVKNVSI--DFQLLPRVLLTHIPLYRRDETPCGPHRSSP 247 (520)
Q Consensus 184 -------------g~~~fV~LDS~~l~g~~-~g~i~~~ql~wL~~ll~--~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~ 247 (520)
..+.|++|||..+.... .......+|+||++.+. ......+||+.|||+|... .+...+
T Consensus 160 ~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG-----~hg~~~ 234 (394)
T PTZ00422 160 TSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSG-----SSKGDS 234 (394)
T ss_pred ccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecC-----CCCCCH
Confidence 23799999997665322 23456789999999653 2235689999999999632 110000
Q ss_pred ccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC---------
Q 010015 248 IINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG--------- 318 (520)
Q Consensus 248 ~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g--------- 318 (520)
. |. ..-..||+..+.++++|||||.+..... +++..++.|+-|-..+
T Consensus 235 ~-------------------L~-~~L~PLL~ky~VdlYisGHDH~lq~i~~----~gt~yIvSGaGs~~~~~~~~~~~~s 290 (394)
T PTZ00422 235 Y-------------------LS-YYLLPLLKDAQVDLYISGYDRNMEVLTD----EGTAHINCGSGGNSGRKSIMKNSKS 290 (394)
T ss_pred H-------------------HH-HHHHHHHHHcCcCEEEEccccceEEecC----CCceEEEeCccccccCCCCCCCCCc
Confidence 0 10 1245577778889999999999876542 5788999888552211
Q ss_pred ---CCCCcEEEEEEEcCCc
Q 010015 319 ---NLYPSFRLLSASNSAL 334 (520)
Q Consensus 319 ---~~~Pgf~llsl~~~~~ 334 (520)
...+||..+++..+..
T Consensus 291 ~F~~~~~GF~~~~l~~~~l 309 (394)
T PTZ00422 291 LFYSEDIGFCIHELNAEGM 309 (394)
T ss_pred ceecCCCCEEEEEEecCEE
Confidence 1247899999887753
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=151.81 Aligned_cols=122 Identities=20% Similarity=0.172 Sum_probs=80.3
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 50 YDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 50 ~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
.+|+++|||+|+........+. ..+....+.+..++...+||+||++||+++++...+ ..+ ..+.++.
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~-~~~-~~~~~~~ 69 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGC----------EADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND-NST-SALDKAV 69 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcc----------hhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch-HHH-HHHHHHH
Confidence 5899999999997643221000 011112333444556679999999999998774322 111 2222233
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHH
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATW 209 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql 209 (520)
+.+. ..++|+++++|||| ..+.+.++|+
T Consensus 70 ~~l~------~~~~p~~~~~GNHD----------------------------------------------~~g~l~~~ql 97 (199)
T cd07383 70 SPMI------DRKIPWAATFGNHD----------------------------------------------GYDWIRPSQI 97 (199)
T ss_pred HHHH------HcCCCEEEECccCC----------------------------------------------CCCCCCHHHH
Confidence 3332 24789999999999 2456788999
Q ss_pred HHHHHhhccC-----CCCCeEEEEccCCCCC
Q 010015 210 DFVKNVSIDF-----QLLPRVLLTHIPLYRR 235 (520)
Q Consensus 210 ~wL~~ll~~~-----~~~p~ILltH~PL~~~ 235 (520)
+||++.+.+. ...|.++|+|+|+...
T Consensus 98 ~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~ 128 (199)
T cd07383 98 EWFKETSAALKKKYGKPIPSLAFFHIPLPEY 128 (199)
T ss_pred HHHHHHHHHHhhccCCCCcceEEEecChHHH
Confidence 9999976543 4578999999998753
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=132.08 Aligned_cols=144 Identities=22% Similarity=0.261 Sum_probs=89.8
Q ss_pred EEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHh
Q 010015 53 VAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIF 132 (520)
Q Consensus 53 ilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if 132 (520)
++++||+|+....... . .. ....+.+.+. .+...+||+|+++||+++.+ ..++|.. +.+.+
T Consensus 1 il~isD~Hl~~~~~~~-----~----~~--~~~~l~~~~~-~~~~~~~d~vi~~GDl~~~~---~~~~~~~----~~~~~ 61 (144)
T cd07400 1 ILHLSDLHFGPERKPE-----L----LA--LLSLLDRLLA-EIKALDPDLVVITGDLTQRG---LPEEFEE----AREFL 61 (144)
T ss_pred CeEeCccCCCCCcchh-----H----HH--HHHHHHHHHH-HHhccCCCEEEECCCCCCCC---CHHHHHH----HHHHH
Confidence 5899999997643221 0 00 0001333433 34567899999999999988 4555544 33333
Q ss_pred ccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHH
Q 010015 133 GLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFV 212 (520)
Q Consensus 133 ~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL 212 (520)
.... ....|++.++||||.
T Consensus 62 ~~l~---~~~~~~~~v~GNHD~---------------------------------------------------------- 80 (144)
T cd07400 62 DALP---APLEPVLVVPGNHDV---------------------------------------------------------- 80 (144)
T ss_pred HHcc---ccCCcEEEeCCCCeE----------------------------------------------------------
Confidence 3110 112599999999995
Q ss_pred HHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccC
Q 010015 213 KNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHD 292 (520)
Q Consensus 213 ~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~ 292 (520)
|+++|+|++...... . .+. ...+...++++..++++++|||+|.
T Consensus 81 ------------iv~~Hhp~~~~~~~~-~----------------------~~~-~~~~~~~~~l~~~~~~~~l~GH~H~ 124 (144)
T cd07400 81 ------------IVVLHHPLVPPPGSG-R----------------------ERL-LDAGDALKLLAEAGVDLVLHGHKHV 124 (144)
T ss_pred ------------EEEecCCCCCCCccc-c----------------------ccC-CCHHHHHHHHHHcCCCEEEECCCCC
Confidence 999999998753210 0 000 1233455566667889999999999
Q ss_pred CCcEEeccCCCCeEEEEeCc
Q 010015 293 QCTVSHESNHEHIKEHTVGT 312 (520)
Q Consensus 293 ~c~~~h~~~~~~i~Eitv~S 312 (520)
..........+++..++.||
T Consensus 125 ~~~~~~~~~~~~~~~~~aGs 144 (144)
T cd07400 125 PYVGNISNAGGGLVVIGAGT 144 (144)
T ss_pred cCeeeccCCCCCEEEEecCC
Confidence 88766543335666666654
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.2e-14 Score=136.34 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=117.2
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf 128 (520)
.+-|++++||+|= .. . .+++.+. ..+..+||.||++||+++.+. ..+++.+ +
T Consensus 3 ~~~kIl~iSDiHg----n~-----------~------~le~l~~-~~~~~~~D~vv~~GDl~~~g~--~~~~~~~----~ 54 (224)
T cd07388 3 TVRYVLATSNPKG----DL-----------E------ALEKLVG-LAPETGADAIVLIGNLLPKAA--KSEDYAA----F 54 (224)
T ss_pred ceeEEEEEEecCC----CH-----------H------HHHHHHH-HHhhcCCCEEEECCCCCCCCC--CHHHHHH----H
Confidence 4678999999992 11 0 1233332 234468999999999999762 2344443 4
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC------C----cceEEEe-CCEEEEEEeCCCCC
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG------K----RNYRFTV-GKVEFIVVDAQTLD 197 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg------~----~ny~~~i-g~~~fV~LDS~~l~ 197 (520)
.+.+. ....|+++++||||-.. .+...+.|+ . ......+ |++.|++++... .
T Consensus 55 l~~l~------~l~~pv~~V~GNhD~~v----------~~~l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~-~ 117 (224)
T cd07388 55 FRILG------EAHLPTFYVPGPQDAPL----------WEYLREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEI-A 117 (224)
T ss_pred HHHHH------hcCCceEEEcCCCChHH----------HHHHHHHhcccccCccceecCCCeEEecCCeEEEEecCCc-C
Confidence 44443 35679999999999421 112222332 1 1113444 569999999642 2
Q ss_pred CCCCCCCCHHHH----HHHHH----hhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccC
Q 010015 198 GHPEGNLAAATW----DFVKN----VSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYIT 269 (520)
Q Consensus 198 g~~~g~i~~~ql----~wL~~----ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls 269 (520)
. ....++++. +|+.+ .+......+.||++|.|++.... + + ..
T Consensus 118 ~--~~e~sE~e~~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~---~-h------------------------~G 167 (224)
T cd07388 118 D--EGEPEEHEALRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGL---N-E------------------------QG 167 (224)
T ss_pred C--CCCcCHHHHhhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCC---C-c------------------------cC
Confidence 1 234566652 34322 22223467899999999987421 0 1 12
Q ss_pred HHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEc
Q 010015 270 EESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 270 ~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~ 331 (520)
.....++++.++|.+++|||+|...+ .-+.+.-++.|+++ .| .|.++.+..
T Consensus 168 S~alr~~I~~~~P~l~i~GHih~~~~-----~~g~t~vvNpg~~~--~g----~~a~i~~~~ 218 (224)
T cd07388 168 SHEVAHLIKTHNPLVVLVGGKGQKHE-----LLGASWVVVPGDLS--EG----RYALLDLRA 218 (224)
T ss_pred HHHHHHHHHHhCCCEEEEcCCceeEE-----EeCCEEEECCCccc--CC----cEEEEEecC
Confidence 24466789999999999999993221 12556666666643 22 577888753
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.3e-16 Score=139.96 Aligned_cols=187 Identities=25% Similarity=0.256 Sum_probs=94.3
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+||+++||+|+..... . . ..+.+.......+||+||++||+++++ ...+..........
T Consensus 1 ~ri~~isD~H~~~~~~------------~----~--~~~~~~~~~~~~~~d~ii~~GD~~~~~---~~~~~~~~~~~~~~ 59 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD------------S----D--AFRKLDEIAAENKPDFIIFLGDLVDGG---NPSEEWRAQFWFFI 59 (200)
T ss_dssp EEEEEEEBBTTTHHHH------------C----H--HHHHHHHHHHHTTTSEEEEESTSSSSS---SHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcch------------h----H--HHHHHHHHhccCCCCEEEeeccccccc---cccccchhhhccch
Confidence 6999999999852110 0 0 122222344567899999999999988 33332221110011
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh----CCcceEEE---------eCCEEEEEEeCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF----GKRNYRFT---------VGKVEFIVVDAQTLD 197 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F----g~~ny~~~---------ig~~~fV~LDS~~l~ 197 (520)
... ....|++.++||||...... ......... ...++... ..+......+.. .
T Consensus 60 ~~~------~~~~~~~~~~GNHD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 125 (200)
T PF00149_consen 60 RLL------NPKIPVYFILGNHDYYSGNS------FYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNE--Y 125 (200)
T ss_dssp HHH------HTTTTEEEEE-TTSSHHHHH------HHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCH--T
T ss_pred hhh------hccccccccccccccceecc------ccccccccccccccccccccccCcceeeeccccccccccccc--c
Confidence 111 36789999999999754321 001111111 11121111 111111111111 0
Q ss_pred CCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHH
Q 010015 198 GHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLL 277 (520)
Q Consensus 198 g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL 277 (520)
..........++.|+..........++|+++|+|++......+.. .......+....++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~ 184 (200)
T PF00149_consen 126 PDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY---------------------GNESKGREALEELL 184 (200)
T ss_dssp HHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH---------------------SSEEEHHHHHHHHH
T ss_pred cccccccchhcccccccccccccccceeEEEecCCCCcccccccc---------------------chhhccHHHHHHHH
Confidence 000111122333444334444457889999999999754321100 00011224456677
Q ss_pred HHhCCcEEEECCccCC
Q 010015 278 DLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 278 ~~l~p~lVfsGH~H~~ 293 (520)
...+++++|+||+|.|
T Consensus 185 ~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 185 KKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHTTCSEEEEESSSSE
T ss_pred hhCCCCEEEeCceecC
Confidence 7788899999999974
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=151.35 Aligned_cols=195 Identities=19% Similarity=0.224 Sum_probs=125.2
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
+..+.++++++|.-...... + ... ......+||+||+.|||...-...+ +.|++ +-
T Consensus 144 ~~~~~~~~i~GDlG~~~~~~------s----~~~------------~~~~~~k~d~vlhiGDlsYa~~~~n-~~wD~-f~ 199 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPYT------S----TLR------------NQEENLKPDAVLHIGDLSYAMGYSN-WQWDE-FG 199 (452)
T ss_pred ccCceeEEEEcccccccccc------c----hHh------------HHhcccCCcEEEEecchhhcCCCCc-cchHH-HH
Confidence 44789999999997753221 0 001 1112338999999999995443222 34554 23
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC------CcceEEEeCCEEEEEEeCCCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG------KRNYRFTVGKVEFIVVDAQTLDGHP 200 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg------~~ny~~~ig~~~fV~LDS~~l~g~~ 200 (520)
|+-+-+ ...+|++++.||||+.+...... .....||..-+. +..|+|++|+++||+|+|....
T Consensus 200 r~vEp~-------As~vPymv~~GNHE~d~~~~~~F-~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~--- 268 (452)
T KOG1378|consen 200 RQVEPI-------ASYVPYMVCSGNHEIDWPPQPCF-VPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYY--- 268 (452)
T ss_pred hhhhhh-------hccCceEEecccccccCCCcccc-cccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccc---
Confidence 333333 36789999999999987642111 112344443222 1368999999999999997554
Q ss_pred CCCCCHHHHHHHHHhhc-cCCC--CCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHH
Q 010015 201 EGNLAAATWDFVKNVSI-DFQL--LPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLL 277 (520)
Q Consensus 201 ~g~i~~~ql~wL~~ll~-~~~~--~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL 277 (520)
+.....+|.+||++.++ .++. .++|++.|.|+|...... -.|++.. ....+.-+.||
T Consensus 269 ~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~--~~reG~~------------------~~~~~~LE~l~ 328 (452)
T KOG1378|consen 269 NFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDA--HYREGEF------------------ESMREGLEPLF 328 (452)
T ss_pred cccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCch--hhccCcc------------------hhhHHHHHHHH
Confidence 33457789999999554 3443 559999999999754310 1111100 01123567788
Q ss_pred HHhCCcEEEECCccCCCcE
Q 010015 278 DLIKPVLVLSGHDHDQCTV 296 (520)
Q Consensus 278 ~~l~p~lVfsGH~H~~c~~ 296 (520)
-..+.++||.||.|.|.+.
T Consensus 329 ~~~~VDvvf~GHvH~YER~ 347 (452)
T KOG1378|consen 329 VKYKVDVVFWGHVHRYERF 347 (452)
T ss_pred HHhceeEEEeccceehhcc
Confidence 8899999999999999764
|
|
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.7e-14 Score=141.93 Aligned_cols=80 Identities=23% Similarity=0.149 Sum_probs=49.3
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNR 127 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~R 127 (520)
.+++|++++||+|+... .+ . ..+++.++ .++..+||+|+++||++|.+.....+++.+.+++
T Consensus 47 ~~~~rI~~lSDlH~~~~--~~-----~----------~~l~~~v~-~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~ 108 (271)
T PRK11340 47 AAPFKILFLADLHYSRF--VP-----L----------SLISDAIA-LGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSP 108 (271)
T ss_pred CCCcEEEEEcccCCCCc--CC-----H----------HHHHHHHH-HHHhcCCCEEEEccCcCCCCccccHHHHHHHHHH
Confidence 35699999999998522 11 0 01333333 2456799999999999984321122233332222
Q ss_pred HHHHhccccCCCCCCceEEEccCCCCCCc
Q 010015 128 FKHIFGLKSQDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 128 f~~if~~~~~~~~~~iPv~~vpGNHDig~ 156 (520)
+. ...|+|+|+||||...
T Consensus 109 L~-----------~~~pv~~V~GNHD~~~ 126 (271)
T PRK11340 109 LA-----------ECAPTFACFGNHDRPV 126 (271)
T ss_pred Hh-----------hcCCEEEecCCCCccc
Confidence 21 2368999999999743
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.7e-14 Score=135.77 Aligned_cols=253 Identities=20% Similarity=0.180 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHhhcceEEEEecccCcccCCCCCCCCCCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHH
Q 010015 7 KLTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLY 86 (520)
Q Consensus 7 ~~~~~l~~~w~~~~~~~E~~~~~~~~~~~C~W~~~~~~~~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~ 86 (520)
+.+.+|..+|.+.++.. +....-.-|......++++.+++++|+|.-..+ ++ .....
T Consensus 7 ~~~~~~~~i~t~f~I~~-------~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g--~~-------nqs~v------- 63 (336)
T KOG2679|consen 7 KPFSLLFGILTIFFILS-------AISSTAELPRLYDPAKSDGSLSFLVVGDWGRRG--SF-------NQSQV------- 63 (336)
T ss_pred cceeehHHHHHHHHHhh-------ccchhhhhhhhcCCCCCCCceEEEEEcccccCC--ch-------hHHHH-------
Confidence 34555666666666653 111122233322334456889999999997432 22 11111
Q ss_pred HHHHHHHhhCCCCCCEEEEcCCcC-CCCC-CCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCH
Q 010015 87 MRRAFFASILPFKPDVILFLGDHF-DGGP-YLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKP 164 (520)
Q Consensus 87 l~r~~~~~~~~~~PD~VI~lGDL~-d~G~-~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~ 164 (520)
......+.+.++.|+|+-+||-+ |+|. ...|+.|++ +|..|+..+ .+++|+|.|.||||...+...++++
T Consensus 64 -a~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~---sF~nIYT~p----SLQkpWy~vlGNHDyrGnV~AQls~ 135 (336)
T KOG2679|consen 64 -ALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQD---SFENIYTAP----SLQKPWYSVLGNHDYRGNVEAQLSP 135 (336)
T ss_pred -HHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHh---hhhhcccCc----ccccchhhhccCccccCchhhhhhH
Confidence 11112234678999999999988 3443 234555554 688888876 5788999999999975443333332
Q ss_pred HHHHHHHHHhCCcceEEEe-------CCEEEEEEeCCCCCCCC----CC-----CCCHHHHHHHHHhhccCCCCCeEEEE
Q 010015 165 EIVRRYEKEFGKRNYRFTV-------GKVEFIVVDAQTLDGHP----EG-----NLAAATWDFVKNVSIDFQLLPRVLLT 228 (520)
Q Consensus 165 ~~~~rf~~~Fg~~ny~~~i-------g~~~fV~LDS~~l~g~~----~g-----~i~~~ql~wL~~ll~~~~~~p~ILlt 228 (520)
-..+-=.+.+-+..|.... -+.++.++|+..+..+. .+ .+...++.||+..+++...+.+|+..
T Consensus 136 ~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S~a~wkiVvG 215 (336)
T KOG2679|consen 136 VLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKASRAKWKIVVG 215 (336)
T ss_pred HHHhhccceecccHHhhcceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHHHHHHHHHHhhcceEEEec
Confidence 1111111111222221111 13344445554433221 11 23456788999988888899999999
Q ss_pred ccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEE
Q 010015 229 HIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEH 308 (520)
Q Consensus 229 H~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Ei 308 (520)
|||+..... -|+ . ..| .+.-..||+..+.++.++||||--.... .+..+|..+
T Consensus 216 Hh~i~S~~~--HG~-----T-----------------~eL-~~~LlPiL~~n~VdlY~nGHDHcLQhis--~~e~~iqf~ 268 (336)
T KOG2679|consen 216 HHPIKSAGH--HGP-----T-----------------KEL-EKQLLPILEANGVDLYINGHDHCLQHIS--SPESGIQFV 268 (336)
T ss_pred ccceehhhc--cCC-----h-----------------HHH-HHHHHHHHHhcCCcEEEecchhhhhhcc--CCCCCeeEE
Confidence 999976421 111 0 001 0123346777778999999999755443 234788899
Q ss_pred EeCcee--ecC
Q 010015 309 TVGTIS--WQQ 317 (520)
Q Consensus 309 tv~S~S--~~~ 317 (520)
|.|+-| |+-
T Consensus 269 tSGagSkaw~g 279 (336)
T KOG2679|consen 269 TSGAGSKAWRG 279 (336)
T ss_pred eeCCcccccCC
Confidence 987665 554
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-12 Score=137.32 Aligned_cols=140 Identities=17% Similarity=0.187 Sum_probs=82.7
Q ss_pred ceEEE-eCCE--EEEEEeCCCCC------CCCCCCCCHHHHHHHHHhhccCC-CCCeEEEEccCCCCCCCCCCCCCCCCc
Q 010015 178 NYRFT-VGKV--EFIVVDAQTLD------GHPEGNLAAATWDFVKNVSIDFQ-LLPRVLLTHIPLYRRDETPCGPHRSSP 247 (520)
Q Consensus 178 ny~~~-ig~~--~fV~LDS~~l~------g~~~g~i~~~ql~wL~~ll~~~~-~~p~ILltH~PL~~~~~~~Cg~~r~~~ 247 (520)
+|+|+ .|++ +||+||+..+. |.+.|.++++|++||++.+...+ +.|++|++|||+....+..+. .+
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~m--d~-- 369 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSE--ME-- 369 (492)
T ss_pred eeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccch--hh--
Confidence 78999 5856 99999997544 44567899999999999877654 667555555544442111111 00
Q ss_pred ccchhhhccCCCccchhccccCHHHHHHHHHHhC----CcEEEECCccCCCcEEeccC-----CCCeEEEEeCceeecCC
Q 010015 248 IINQRIVRTGHSQEILYQNYITEESSNRLLDLIK----PVLVLSGHDHDQCTVSHESN-----HEHIKEHTVGTISWQQG 318 (520)
Q Consensus 248 ~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~----p~lVfsGH~H~~c~~~h~~~-----~~~i~Eitv~S~S~~~g 318 (520)
+. .......-..+|..+ ..+|++.++ ..++||||.|.....-|... ..+.-|+++.|.-
T Consensus 370 w~-----~~~~~~~~~L~n~~~---~~eLlaLL~~hPnVla~LsGHvHrn~v~a~~~p~~~~pe~gFWeveTaSl~---- 437 (492)
T TIGR03768 370 WW-----LGAADANPDLQNAVS---LTGLVTTLQKYPNLLMWIAGHRHLNTVKAFPSPDPARPEYGFWQVETASLR---- 437 (492)
T ss_pred hc-----ccccccccccccccc---HHHHHHHHhcCCCeEEEEcCCcccccccccCCCCCCCCcCceEEEeehhhc----
Confidence 00 000000000122121 234555553 26799999998776655432 2477888877753
Q ss_pred CCCC-cEEEEEEEcCCc
Q 010015 319 NLYP-SFRLLSASNSAL 334 (520)
Q Consensus 319 ~~~P-gf~llsl~~~~~ 334 (520)
.-| =||++++..+.+
T Consensus 438 -DfPQq~R~~Ei~~n~d 453 (492)
T TIGR03768 438 -DFPQQFRTFEIYLNSD 453 (492)
T ss_pred -cchhhceEEEEEeCCC
Confidence 123 588999887753
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-12 Score=130.09 Aligned_cols=250 Identities=18% Similarity=0.189 Sum_probs=129.6
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHH--HHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLAL--EVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQES 124 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~--~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~ 124 (520)
..++||++++||+|++-...-+........ .-+...+..+|.| .+...+||+|+++||++++. . -.....
T Consensus 50 ~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~r----vL~sE~PDlVVfTGD~i~g~-~--t~Da~~- 121 (379)
T KOG1432|consen 50 EDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSR----VLASEKPDLVVFTGDNIFGH-S--TQDAAT- 121 (379)
T ss_pred CCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHH----HHhccCCCEEEEeCCccccc-c--cHhHHH-
Confidence 467899999999999754221111111111 0012233344444 45678999999999999873 2 222222
Q ss_pred HHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH------------------HhCCcceEEEeC--
Q 010015 125 LNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK------------------EFGKRNYRFTVG-- 184 (520)
Q Consensus 125 ~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~------------------~Fg~~ny~~~ig-- 184 (520)
-+.+.+.+. +..++|+..+.||||-... ....-+..|.. ..|..||...+-
T Consensus 122 --sl~kAvaP~---I~~~IPwA~~lGNHDdes~----ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~ 192 (379)
T KOG1432|consen 122 --SLMKAVAPA---IDRKIPWAAVLGNHDDESD----LTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGA 192 (379)
T ss_pred --HHHHHhhhH---hhcCCCeEEEecccccccc----cCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccC
Confidence 233333321 1478999999999995432 22222222221 112223332221
Q ss_pred ---------CEEEEEEeCCCCCCC-----CCCCCCHHHHHHHHHhhcc-------CCCCCeEEEEccCCCCCCCCCCCCC
Q 010015 185 ---------KVEFIVVDAQTLDGH-----PEGNLAAATWDFVKNVSID-------FQLLPRVLLTHIPLYRRDETPCGPH 243 (520)
Q Consensus 185 ---------~~~fV~LDS~~l~g~-----~~g~i~~~ql~wL~~ll~~-------~~~~p~ILltH~PL~~~~~~~Cg~~ 243 (520)
--.+++||+...... ....+.+.|+.||+....+ ....|-+.+-|+|+-........
T Consensus 193 ~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~-- 270 (379)
T KOG1432|consen 193 IDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESK-- 270 (379)
T ss_pred CCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCC--
Confidence 135678887654322 2356889999999985521 11237899999999653211000
Q ss_pred CCCcccchhhhccCCCccchhccc-c----CHHHHHHHHHHhCCcEEEECCccC--CCcEEeccCCCCeEEEEeCceee-
Q 010015 244 RSSPIINQRIVRTGHSQEILYQNY-I----TEESSNRLLDLIKPVLVLSGHDHD--QCTVSHESNHEHIKEHTVGTISW- 315 (520)
Q Consensus 244 r~~~~~~~~~~~~~~~~g~~yqn~-l----s~e~s~~LL~~l~p~lVfsGH~H~--~c~~~h~~~~~~i~Eitv~S~S~- 315 (520)
.|.+ ..+|.. . .....+.|-+....++|||||+|- .|-..+ +.+...--|++..
T Consensus 271 --tp~~------------g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k----~~~wlCygGgaGyg 332 (379)
T KOG1432|consen 271 --TPLI------------GVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELK----GELWLCYGGGAGYG 332 (379)
T ss_pred --Cccc------------ceeeccccccccccHHHHHHHhccCcceEEeccccccceecccC----CeEEEEecCCCccC
Confidence 0110 011111 1 111122233355679999999994 455433 2233333344442
Q ss_pred --cCCCCCCcEEEEEEEcCC
Q 010015 316 --QQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 316 --~~g~~~Pgf~llsl~~~~ 333 (520)
..+.-.++-|+++++...
T Consensus 333 gYg~~gw~Rr~Rv~e~d~~~ 352 (379)
T KOG1432|consen 333 GYGIGGWERRARVFELDLNK 352 (379)
T ss_pred CcCcCCcccceEEEEccccc
Confidence 112235677888886653
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.8e-13 Score=131.34 Aligned_cols=159 Identities=13% Similarity=-0.068 Sum_probs=80.9
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
||+++||+||+.......+. .. ... .-..+.+.++. +...+||+|+++||+++... .+.+++....+.+.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~-~~---~~~--~~~~~~~~~~~-~~~~~~d~i~~~GD~~~~~~-~~~~~~~~~~~~~~~~ 72 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRD-RR---RED--QFEAFEEIVEL-AIEEKVDFVLIAGDLFDSNN-PSPEALELLIEALRRL 72 (223)
T ss_pred CeEEeccccCCccccCcCcc-cc---hHH--HHHHHHHHHHH-HHhcCCCEEEECCcccCCCC-CCHHHHHHHHHHHHHH
Confidence 68999999998543321110 00 000 00113333333 34568999999999998764 2344444433334333
Q ss_pred hccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-----Ccc--eE--EEeCCEEEEEEeCCCCCCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-----KRN--YR--FTVGKVEFIVVDAQTLDGHPEG 202 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-----~~n--y~--~~ig~~~fV~LDS~~l~g~~~g 202 (520)
. ..++|+++++||||........ . ....+...+. ... .. +..+++.|++++....
T Consensus 73 ~-------~~~~~v~~~~GNHD~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~------ 136 (223)
T cd00840 73 K-------EAGIPVFIIAGNHDSPSRLGAL--S-PLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR------ 136 (223)
T ss_pred H-------HCCCCEEEecCCCCCccccccc--c-chHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH------
Confidence 2 1468999999999975432110 0 0111111110 000 11 2234566777765310
Q ss_pred CCCHHHHHHHHH-hhccCCCCCeEEEEccCCCC
Q 010015 203 NLAAATWDFVKN-VSIDFQLLPRVLLTHIPLYR 234 (520)
Q Consensus 203 ~i~~~ql~wL~~-ll~~~~~~p~ILltH~PL~~ 234 (520)
.......+++++ .....++.+.|+++|.|+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~Il~~H~~~~~ 169 (223)
T cd00840 137 SRLRDLLADAELRPRPLDPDDFNILLLHGGVAG 169 (223)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEEeeeeec
Confidence 111222222222 23344578899999999865
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=122.36 Aligned_cols=138 Identities=15% Similarity=0.072 Sum_probs=76.7
Q ss_pred hCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh
Q 010015 95 ILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF 174 (520)
Q Consensus 95 ~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F 174 (520)
....+||+|+++||+++.+ ...++.. +.... ....|+++++||||..
T Consensus 22 ~~~~~~d~li~~GDi~~~~---~~~~~~~----~~~~~-------~~~~~v~~v~GNHD~~------------------- 68 (166)
T cd07404 22 PIAPDADILVLAGDIGYLT---DAPRFAP----LLLAL-------KGFEPVIYVPGNHEFY------------------- 68 (166)
T ss_pred CCCCCCCEEEECCCCCCCc---chHHHHH----HHHhh-------cCCccEEEeCCCcceE-------------------
Confidence 3567899999999999876 2333222 12221 3567999999999952
Q ss_pred CCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhh
Q 010015 175 GKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIV 254 (520)
Q Consensus 175 g~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~ 254 (520)
+.|++..- -.+. .....+. ++..... -.+++||++|+|++... +...+..
T Consensus 69 -----------~~~~G~~~---w~~~-~~~~~~~---~~~~~~d-~~~~~vv~~HhpP~~~~---~~~~~~~-------- 118 (166)
T cd07404 69 -----------VRIIGTTL---WSDI-SLFGEAA---ARMRMND-FRGKTVVVTHHAPSPLS---LAPQYGD-------- 118 (166)
T ss_pred -----------EEEEeeec---cccc-CccchHH---HHhCCCC-CCCCEEEEeCCCCCccc---cCccccC--------
Confidence 33333320 0110 1112222 2222222 23799999999998742 1111100
Q ss_pred ccCCCccchhccccCHHHHH---HHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEe
Q 010015 255 RTGHSQEILYQNYITEESSN---RLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTV 310 (520)
Q Consensus 255 ~~~~~~g~~yqn~ls~e~s~---~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv 310 (520)
.......++ ++++..++++++|||+|..+.... ++++.++.
T Consensus 119 -----------~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~~----~g~~~~~n 162 (166)
T cd07404 119 -----------SLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYRI----GGTRVLSN 162 (166)
T ss_pred -----------CCcchhhhhccHhHHhhcCCCEEEECCccccceEEE----CCEEEEec
Confidence 001112222 334455678999999999987765 56655543
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-12 Score=118.63 Aligned_cols=55 Identities=20% Similarity=0.222 Sum_probs=43.4
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEc
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~ 331 (520)
...++...+++++++||.|....... +++..++.||+++......++|.++++.+
T Consensus 101 ~~~~~~~~~~~~~~~GH~H~~~~~~~----~~~~~~~~Gs~~~~~~~~~~~~~i~~~~~ 155 (156)
T PF12850_consen 101 LREILSRENVDLVLHGHTHRPQVFKI----GGIHVINPGSIGGPRHGDQSGYAILDIED 155 (156)
T ss_dssp HHHHHHHTTSSEEEESSSSSEEEEEE----TTEEEEEE-GSSS-SSSSSEEEEEEEETT
T ss_pred hhhhhcccCCCEEEcCCcccceEEEE----CCEEEEECCcCCCCCCCCCCEEEEEEEec
Confidence 44566677889999999999887664 68999999999987665578999999864
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.2e-12 Score=121.21 Aligned_cols=78 Identities=23% Similarity=0.234 Sum_probs=49.0
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 50 YDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 50 ~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
++|++++||+|+..... ...+.+.++. +...+||+|+++||+++.+.... + .+.
T Consensus 1 ~~~i~~~sDlH~~~~~~-----------------~~~~~~~~~~-~~~~~~d~vl~~GD~~~~~~~~~-~-------~~~ 54 (223)
T cd07385 1 GLRIAHLSDLHLGPFVS-----------------RERLERLVEK-INALKPDLVVLTGDLVDGSVDVL-E-------LLL 54 (223)
T ss_pred CCEEEEEeecCCCccCC-----------------HHHHHHHHHH-HhccCCCEEEEcCcccCCcchhh-H-------HHH
Confidence 47999999999863211 0012333322 34568999999999999774221 1 122
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
+.+..- ....|+++++||||....
T Consensus 55 ~~l~~l----~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 55 ELLKKL----KAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred HHHhcc----CCCCCEEEECCCcccccC
Confidence 333211 245799999999997654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-10 Score=107.74 Aligned_cols=208 Identities=19% Similarity=0.276 Sum_probs=122.6
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcC--CCCCCCCHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHF--DGGPYLSDEEWQESLN 126 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~--d~G~~~s~~e~~~~~~ 126 (520)
.++|++.+||+|-... . +++.. .+....++|++++.|||+ +.+. ..+-.+..
T Consensus 2 ~~mkil~vtDlHg~~~------------~---------~~k~~-~~~~~~~~D~lviaGDlt~~~~~~---~~~~~~~~- 55 (226)
T COG2129 2 KKMKILAVTDLHGSED------------S---------LKKLL-NAAADIRADLLVIAGDLTYFHFGP---KEVAEELN- 55 (226)
T ss_pred CcceEEEEeccccchH------------H---------HHHHH-HHHhhccCCEEEEecceehhhcCc---hHHHHhhh-
Confidence 3689999999995310 0 12222 222344899999999999 6662 22211110
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCC--cceEEEeCCEEEEEEeCCCC-CCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGK--RNYRFTVGKVEFIVVDAQTL-DGHPEGN 203 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~--~ny~~~ig~~~fV~LDS~~l-~g~~~g~ 203 (520)
.+..+- ...+|++++|||-|... . .+..+..|. .+.+..+|++.|+++--... +.....+
T Consensus 56 ~~e~l~-------~~~~~v~avpGNcD~~~---------v-~~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e 118 (226)
T COG2129 56 KLEALK-------ELGIPVLAVPGNCDPPE---------V-IDVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPRE 118 (226)
T ss_pred HHHHHH-------hcCCeEEEEcCCCChHH---------H-HHHHHhcccccccceEEecCcEEEEecccCCCCCCCccc
Confidence 022221 36889999999988421 1 222222443 23678899999999644211 1111234
Q ss_pred CCHHHH-HHHHHhhccCCCCCe-EEEEccCCCCCCC-CCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh
Q 010015 204 LAAATW-DFVKNVSIDFQLLPR-VLLTHIPLYRRDE-TPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI 280 (520)
Q Consensus 204 i~~~ql-~wL~~ll~~~~~~p~-ILltH~PL~~~~~-~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l 280 (520)
+.++++ .-+++..... ..+. |+++|.|+|.... ++.| |.+ .....-+++++.+
T Consensus 119 ~~E~~I~s~l~~~v~~~-~~~~~Il~~HaPP~gt~~d~~~g----------------------~~h-vGS~~vr~~ieef 174 (226)
T COG2129 119 FSEDEIYSKLKSLVKKA-DNPVNILLTHAPPYGTLLDTPSG----------------------YVH-VGSKAVRKLIEEF 174 (226)
T ss_pred cCHHHHHHHHHHHHhcc-cCcceEEEecCCCCCccccCCCC----------------------ccc-cchHHHHHHHHHh
Confidence 444443 3344433322 2332 9999999998532 1111 222 3345678899999
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
+|.+.+|||+|.+.-..- .|++..+.-|+.+ ...|.++.+...
T Consensus 175 qP~l~i~GHIHEs~G~d~---iG~TivVNPG~~~------~g~yA~i~l~~~ 217 (226)
T COG2129 175 QPLLGLHGHIHESRGIDK---IGNTIVVNPGPLG------EGRYALIELEKE 217 (226)
T ss_pred CCceEEEeeecccccccc---cCCeEEECCCCcc------CceEEEEEecCc
Confidence 999999999998644322 2566666666743 457889988654
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.8e-11 Score=106.02 Aligned_cols=45 Identities=29% Similarity=0.319 Sum_probs=30.5
Q ss_pred CCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCc-eEEEccCCCCC
Q 010015 97 PFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDI-RVHFLPGNHDN 154 (520)
Q Consensus 97 ~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~i-Pv~~vpGNHDi 154 (520)
..+||+|+++||+++.+ ..+++.. +.+.+. ..+. +++.++||||.
T Consensus 17 ~~~~D~vi~~GD~~~~~---~~~~~~~----~~~~l~------~~~~~~~~~v~GNHD~ 62 (135)
T cd07379 17 IPDGDVLIHAGDLTERG---TLEELQK----FLDWLK------SLPHPHKIVIAGNHDL 62 (135)
T ss_pred CCCCCEEEECCCCCCCC---CHHHHHH----HHHHHH------hCCCCeEEEEECCCCC
Confidence 45799999999999877 4444443 333333 1223 36789999995
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-10 Score=111.66 Aligned_cols=161 Identities=21% Similarity=0.292 Sum_probs=83.5
Q ss_pred hCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHH-
Q 010015 95 ILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE- 173 (520)
Q Consensus 95 ~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~- 173 (520)
++..+||+|+++||++++. .+ .++.+. ....|+++++||||........ ...++|.+.
T Consensus 21 l~~~~pD~Vl~~GDi~~~~-----~~---~~~~l~----------~l~~p~~~V~GNHD~~~~~~~~---~k~~~l~~~L 79 (238)
T cd07397 21 LHLLQPDLVLFVGDFGNES-----VQ---LVRAIS----------SLPLPKAVILGNHDAWYDATFR---KKGDRVQEQL 79 (238)
T ss_pred HhccCCCEEEECCCCCcCh-----HH---HHHHHH----------hCCCCeEEEcCCCccccccccc---chHHHHHHHH
Confidence 3556899999999998643 11 222222 2356899999999976543211 123345433
Q ss_pred --hCCcc---eEEEeCCEEEEEEeCCCCCCCCCCCCCH-------------HHHHH-HHHhhccCCCCCeEEEEccCCCC
Q 010015 174 --FGKRN---YRFTVGKVEFIVVDAQTLDGHPEGNLAA-------------ATWDF-VKNVSIDFQLLPRVLLTHIPLYR 234 (520)
Q Consensus 174 --Fg~~n---y~~~ig~~~fV~LDS~~l~g~~~g~i~~-------------~ql~w-L~~ll~~~~~~p~ILltH~PL~~ 234 (520)
.|... -..++....+..+-+...........++ +..+. ++......++.+.|+++|.++..
T Consensus 80 ~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G 159 (238)
T cd07397 80 ELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILLAHNGPSG 159 (238)
T ss_pred HHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcC
Confidence 23221 1122333333344443222111111222 11222 22232334577899999999876
Q ss_pred CC---CCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC----CcEEEECCccCC
Q 010015 235 RD---ETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK----PVLVLSGHDHDQ 293 (520)
Q Consensus 235 ~~---~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~----p~lVfsGH~H~~ 293 (520)
.. ..+||.....+ -.++-+++.+++| +.++ |+++++||.|..
T Consensus 160 ~g~~~~~~cg~d~~~~----------------~~~~G~~~l~~ai-~~~~~~~~~~l~~fGH~H~~ 208 (238)
T cd07397 160 LGSDAEDPCGRDWKPP----------------GGDWGDPDLALAI-SQIQQGRQVPLVVFGHMHHR 208 (238)
T ss_pred CCcccccccccccCCc----------------CCCCCCHHHHHHH-HHHhccCCCCEEEeCCccCc
Confidence 42 34677422111 1233455555555 3333 789999999987
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.2e-10 Score=108.54 Aligned_cols=180 Identities=19% Similarity=0.322 Sum_probs=97.9
Q ss_pred CCCCEEEEcCCcCCCCCCCCHHHHH----------------------HHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 98 FKPDVILFLGDHFDGGPYLSDEEWQ----------------------ESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 98 ~~PD~VI~lGDL~d~G~~~s~~e~~----------------------~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.+||+|+++||+..... ..++|. +.+..|-+++. ..++|+++||||||-.
T Consensus 31 ~~~D~~v~~G~~~~~~a--~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L~------~~~~p~~~vPG~~Dap 102 (255)
T PF14582_consen 31 KGPDAVVFVGDLLKAEA--RSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRILG------ELGVPVFVVPGNMDAP 102 (255)
T ss_dssp HT-SEEEEES-SS-TCH--HHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHHH------CC-SEEEEE--TTS-S
T ss_pred cCCCEEEEeccccccch--hhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHHH------hcCCcEEEecCCCCch
Confidence 37999999999996541 234555 23345666665 5899999999999943
Q ss_pred cccccCCCHHHHHHHHHHhC----Cc-------ceEEEeCCEEEEEEeCCCCCCCC-CC---CCCHHHHHHHHHhhccCC
Q 010015 156 YAALLSHKPEIVRRYEKEFG----KR-------NYRFTVGKVEFIVVDAQTLDGHP-EG---NLAAATWDFVKNVSIDFQ 220 (520)
Q Consensus 156 ~~~~~~~~~~~~~rf~~~Fg----~~-------ny~~~ig~~~fV~LDS~~l~g~~-~g---~i~~~ql~wL~~ll~~~~ 220 (520)
. ..-++..++ .+ ++.+.-|.+.+++.-..-..+.. .. ....-..+|..+.+.+.+
T Consensus 103 ~----------~~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk 172 (255)
T PF14582_consen 103 E----------RFFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK 172 (255)
T ss_dssp H----------HHHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT
T ss_pred H----------HHHHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcc
Confidence 2 122333333 11 22333345888887653221111 11 112223455555566666
Q ss_pred CCCeEEEEccCC-CCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEec
Q 010015 221 LLPRVLLTHIPL-YRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHE 299 (520)
Q Consensus 221 ~~p~ILltH~PL-~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~ 299 (520)
..+.|++.|.|+ +.. |.. ....+....|++.++|++++|||.|......+-
T Consensus 173 ~~r~IlLfhtpPd~~k-----g~~-----------------------h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~l 224 (255)
T PF14582_consen 173 DYRKILLFHTPPDLHK-----GLI-----------------------HVGSAAVRDLIKTYNPDIVLCGHIHESHGKESL 224 (255)
T ss_dssp SSEEEEEESS-BTBCT-----CTB-----------------------TTSBHHHHHHHHHH--SEEEE-SSS-EE--EEE
T ss_pred cccEEEEEecCCccCC-----Ccc-----------------------cccHHHHHHHHHhcCCcEEEecccccchhhHHh
Confidence 778999999998 211 100 012245677999999999999999987643332
Q ss_pred cCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 300 SNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 300 ~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
+.+.-+.-||++- -+|.++.+..+
T Consensus 225 ---G~TlVVNPGsL~~------G~yAvI~l~~~ 248 (255)
T PF14582_consen 225 ---GKTLVVNPGSLAE------GDYAVIDLEQD 248 (255)
T ss_dssp ---TTEEEEE--BGGG------TEEEEEETTTT
T ss_pred ---CCEEEecCccccc------CceeEEEeccc
Confidence 6788888899873 37888887665
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.1e-09 Score=112.25 Aligned_cols=89 Identities=20% Similarity=0.261 Sum_probs=53.1
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHH-HH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNR-FK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~R-f~ 129 (520)
+|++++||+||+..... + ++.... ...+.+.+.. +...+||+|+++||++|.....+..... ...+ +.
T Consensus 1 MKilhiSD~HLG~~~~~---~-----~~~~~~-~~~l~~ii~~-a~~~~vD~VliaGDlfD~~~~~~~~~~~-~~~~~l~ 69 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD---P-----WFQNYQ-LKFIKQAIEY-SKAHGITTWIQLGDTFDVRKAITQNTMN-FVREKIF 69 (340)
T ss_pred CeEEEEeeecCCCcCCC---h-----hhHHHH-HHHHHHHHHH-HHHcCCCEEEECCcccCCCCCCCHHHHH-HHHHHHH
Confidence 58999999999753221 1 111111 1124444433 4567899999999999975333333221 1222 22
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCc
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~ 156 (520)
+.+. ..++|++.++||||..+
T Consensus 70 ~~L~------~~gi~v~~I~GNHD~~~ 90 (340)
T PHA02546 70 DLLK------EAGITLHVLVGNHDMYY 90 (340)
T ss_pred HHHH------HCCCeEEEEccCCCccc
Confidence 2332 35789999999999754
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-09 Score=99.43 Aligned_cols=49 Identities=16% Similarity=0.246 Sum_probs=37.3
Q ss_pred hCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 280 IKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 280 l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
...++|++||+|....... +++..++.||.+.......|+|.++++.++
T Consensus 105 ~~~d~vi~GHtH~~~~~~~----~~~~~iNpGs~~~~~~~~~~~~~il~~~~~ 153 (158)
T TIGR00040 105 LGVDVLIFGHTHIPVAEEL----RGILLINPGSLTGPRNGNTPSYAILDVDKD 153 (158)
T ss_pred cCCCEEEECCCCCCccEEE----CCEEEEECCccccccCCCCCeEEEEEecCC
Confidence 3558999999999876555 578899999987543323689999998664
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.4e-09 Score=99.29 Aligned_cols=65 Identities=26% Similarity=0.255 Sum_probs=46.4
Q ss_pred HHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC----CCCCCcEEEEEEEcCCcccCCcccccEEEeEEec
Q 010015 276 LLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ----GNLYPSFRLLSASNSALLNMSNLEEAVLTRLCFL 351 (520)
Q Consensus 276 LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~----g~~~Pgf~llsl~~~~~~~~~~~~~~~~t~~C~L 351 (520)
+.+..+.+++++||+|....... +++..++.||++... +...|+|.++++... .+..+.+.|
T Consensus 101 ~~~~~~~dvii~GHTH~p~~~~~----~g~~viNPGSv~~~~~~~~~~~~~syail~~~~~----------~~~~~~~~l 166 (178)
T cd07394 101 LQRQLDVDILISGHTHKFEAFEH----EGKFFINPGSATGAFSPLDPNVIPSFVLMDIQGS----------KVVTYVYQL 166 (178)
T ss_pred HHHhcCCCEEEECCCCcceEEEE----CCEEEEECCCCCCCCCCCCCCCCCeEEEEEecCC----------eEEEEEEEE
Confidence 44455669999999998765444 578999999998432 233579999998655 245577777
Q ss_pred ccc
Q 010015 352 PMQ 354 (520)
Q Consensus 352 P~q 354 (520)
+++
T Consensus 167 ~~~ 169 (178)
T cd07394 167 IDG 169 (178)
T ss_pred ECC
Confidence 654
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.5e-10 Score=103.35 Aligned_cols=53 Identities=21% Similarity=0.230 Sum_probs=41.1
Q ss_pred HHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEc
Q 010015 275 RLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 275 ~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~ 331 (520)
.++...+.+++++||+|....... +++..++.||++...+...++|.++++.+
T Consensus 96 ~~~~~~~~d~vi~GHtH~~~~~~~----~~~~~inpGs~~~~~~~~~~~~~i~~~~~ 148 (155)
T cd00841 96 YLAKEGGADVVLYGHTHIPVIEKI----GGVLLLNPGSLSLPRGGGPPTYAILEIDD 148 (155)
T ss_pred hhhhhcCCCEEEECcccCCccEEE----CCEEEEeCCCccCcCCCCCCeEEEEEecC
Confidence 345556679999999999876554 57889999999866444467999999875
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=8e-10 Score=96.22 Aligned_cols=49 Identities=33% Similarity=0.488 Sum_probs=34.0
Q ss_pred hhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCC
Q 010015 94 SILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD 153 (520)
Q Consensus 94 ~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHD 153 (520)
.....+||+|+++||+++.+.......+.. +.... ....|++.++||||
T Consensus 21 ~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~GNHD 69 (131)
T cd00838 21 LAAAEKPDFVLVLGDLVGDGPDPEEVLAAA----LALLL-------LLGIPVYVVPGNHD 69 (131)
T ss_pred HhcccCCCEEEECCcccCCCCCchHHHHHH----HHHhh-------cCCCCEEEeCCCce
Confidence 346789999999999999885432222111 11121 47889999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.5e-09 Score=103.13 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCce
Q 010015 272 SSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTI 313 (520)
Q Consensus 272 ~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~ 313 (520)
...++++..+.++++|||+|.........+..+...+..|+.
T Consensus 176 ~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW 217 (231)
T TIGR01854 176 EVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW 217 (231)
T ss_pred HHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence 345556666789999999999875543222235678888884
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.4e-09 Score=104.46 Aligned_cols=213 Identities=14% Similarity=0.155 Sum_probs=99.5
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCC--CCCHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGP--YLSDEEWQESLNRF 128 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~--~~s~~e~~~~~~Rf 128 (520)
+|++++||+|+..... ...+ .+.+.+. ....+||.|+++||++|... ....+...+..+.+
T Consensus 1 M~i~~iSDlHl~~~~~----------~~~~-----~~~~~l~--~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l 63 (241)
T PRK05340 1 MPTLFISDLHLSPERP----------AITA-----AFLRFLR--GEARQADALYILGDLFEAWIGDDDPSPFAREIAAAL 63 (241)
T ss_pred CcEEEEeecCCCCCCh----------hHHH-----HHHHHHH--hhhccCCEEEEccceeccccccCcCCHHHHHHHHHH
Confidence 4799999999964211 0000 1112221 13357999999999998421 11112222223333
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC----CcceEEEeCCEEEEEEeCCCCCCCCCCCC
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG----KRNYRFTVGKVEFIVVDAQTLDGHPEGNL 204 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg----~~ny~~~ig~~~fV~LDS~~l~g~~~g~i 204 (520)
+++ . ..++|+++++||||.... ..|.+..| +....++++|.+++..-.-.+..
T Consensus 64 ~~l-~------~~g~~v~~v~GNHD~~~~----------~~~~~~~g~~~l~~~~~~~~~g~~i~l~HGd~~~~------ 120 (241)
T PRK05340 64 KAL-S------DSGVPCYFMHGNRDFLLG----------KRFAKAAGMTLLPDPSVIDLYGQRVLLLHGDTLCT------ 120 (241)
T ss_pred HHH-H------HcCCeEEEEeCCCchhhh----------HHHHHhCCCEEeCCcEEEEECCEEEEEECCccccc------
Confidence 333 2 245899999999996322 23444445 22334677887777764322211
Q ss_pred CHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcE
Q 010015 205 AAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVL 284 (520)
Q Consensus 205 ~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~l 284 (520)
.....+++.++.... ....+|.+.|+..... -.+.+.++-..........+.+ ...+...++++..+.+.
T Consensus 121 ~d~~y~~~r~~~r~~--~~~~~~~~~p~~~~~~-------ia~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 190 (241)
T PRK05340 121 DDKAYQRFRRKVRNP--WLQWLFLALPLSIRLR-------IAAKMRAKSKAANQSKSLEIMD-VNPEAVAALMEKHGVDT 190 (241)
T ss_pred CCHHHHHHHHHHhCH--HHHHHHHhCCHHHHHH-------HHHHHHHHHHHhcCCCcccccC-CCHHHHHHHHHHhCCCE
Confidence 223344444443321 1111222223211000 0000000000000000001111 12233456667777899
Q ss_pred EEECCccCCCcEEeccCCCCeEEEEeCce
Q 010015 285 VLSGHDHDQCTVSHESNHEHIKEHTVGTI 313 (520)
Q Consensus 285 VfsGH~H~~c~~~h~~~~~~i~Eitv~S~ 313 (520)
+++||+|............+...+..|+.
T Consensus 191 ~i~GH~H~~~~~~~~~~~~~~~~~~lgdw 219 (241)
T PRK05340 191 LIHGHTHRPAIHQLQAGGQPATRIVLGDW 219 (241)
T ss_pred EEECcccCcceeeccCCCcceEEEEeCCC
Confidence 99999998765433211123456777773
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.4e-09 Score=107.72 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHhhcceEEEEecccCcccCCCCCCCCCCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHH
Q 010015 8 LTLFLCLTWTITLLYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYM 87 (520)
Q Consensus 8 ~~~~l~~~w~~~~~~~E~~~~~~~~~~~C~W~~~~~~~~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l 87 (520)
...+.+.+|....++.|-..+.... -.|.... .......++++++||.|..... .+ +
T Consensus 6 ~~~i~~~~~~~~~~~~~~~~l~~~~---~~i~~~~-~~~~~~~~~iv~lSDlH~~~~~-------------~~------~ 62 (284)
T COG1408 6 GIAITVIALASYAHLLEPGWLRVVK---LTILTPK-LPASLQGLKIVQLSDLHSLPFR-------------EE------K 62 (284)
T ss_pred HHHHHHHHHHHHHHhcccceEEEEE---EEeecCC-CCcccCCeEEEEeehhhhchhh-------------HH------H
Confidence 3455666676667777766553322 1222221 1123467899999999985311 00 1
Q ss_pred HHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 88 RRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 88 ~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
.+.+ ..+....||.|+++||+++.......+.+.+ .+.++ ....++|++.||||.+..
T Consensus 63 ~~~~-~~i~~~~~DlivltGD~~~~~~~~~~~~~~~---~L~~L--------~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 63 LALL-IAIANELPDLIVLTGDYVDGDRPPGVAALAL---FLAKL--------KAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred HHHH-HHHHhcCCCEEEEEeeeecCCCCCCHHHHHH---HHHhh--------hccCCEEEEecccccccc
Confidence 1112 2234456799999999999621112333333 22222 245689999999997654
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.7e-09 Score=99.67 Aligned_cols=44 Identities=20% Similarity=0.309 Sum_probs=35.0
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEE
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSA 329 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl 329 (520)
.+++++||+|....... ++...++.||.+...|...++|.++++
T Consensus 119 ~d~vi~GHtH~p~~~~~----~~~~~iNpGs~~~p~~~~~~s~~il~~ 162 (182)
T PRK09453 119 GDVLVYGHTHIPVAEKQ----GGIILFNPGSVSLPKGGYPASYGILDD 162 (182)
T ss_pred CCEEEECCCCCCcceEE----CCEEEEECCCccccCCCCCCeEEEEEC
Confidence 58999999998766554 578999999988544555679999886
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.9e-08 Score=107.37 Aligned_cols=211 Identities=16% Similarity=0.172 Sum_probs=120.4
Q ss_pred HHHHHHHhhCCCC-CCEEEEcCCcCCCCCCC-CHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccC---
Q 010015 87 MRRAFFASILPFK-PDVILFLGDHFDGGPYL-SDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLS--- 161 (520)
Q Consensus 87 l~r~~~~~~~~~~-PD~VI~lGDL~d~G~~~-s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~--- 161 (520)
|..++..+....+ +|+|+.+||......|. +.++-...+.++.+.+... .+++|+|...||||+-..+...
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~----FpdvpvypalGNhe~~P~N~F~~~~ 272 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEY----FPDVPVYPALGNHEIHPVNLFAPGS 272 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHh----CCCCceeeecccCCCCcHhhcCCCC
Confidence 3445555544455 99999999999776553 2333222333333333222 3589999999999975432110
Q ss_pred CCHHHH-----HHHHHHhC------------C-cceE-EEeCCEEEEEEeCCCCCCCC-----CCCCCHHHHHHHHHhhc
Q 010015 162 HKPEIV-----RRYEKEFG------------K-RNYR-FTVGKVEFIVVDAQTLDGHP-----EGNLAAATWDFVKNVSI 217 (520)
Q Consensus 162 ~~~~~~-----~rf~~~Fg------------~-~ny~-~~ig~~~fV~LDS~~l~g~~-----~g~i~~~ql~wL~~ll~ 217 (520)
...... +.+...+. . .+|. ...+|.++|.||+....... +.....+|++|+...+.
T Consensus 273 ~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~ 352 (577)
T KOG3770|consen 273 VPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQ 352 (577)
T ss_pred CcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHH
Confidence 110000 11111111 1 2343 34599999999997554332 33456778999988553
Q ss_pred --cCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCC--cEEEECCccCC
Q 010015 218 --DFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKP--VLVLSGHDHDQ 293 (520)
Q Consensus 218 --~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p--~lVfsGH~H~~ 293 (520)
+.++..+=++.|+|+-. ..|... | ++| .-+++..+.. ...|.||+|..
T Consensus 353 ~ae~~GekVhil~HIPpG~---~~c~~~----w---------------s~~------f~~iv~r~~~tI~gqf~GH~h~d 404 (577)
T KOG3770|consen 353 EAESAGEKVHILGHIPPGD---GVCLEG----W---------------SIN------FYRIVNRFRSTIAGQFYGHTHID 404 (577)
T ss_pred HHHhcCCEEEEEEeeCCCC---cchhhh----h---------------hHH------HHHHHHHHHHhhhhhccccCcce
Confidence 45577899999999876 235421 1 111 3345555543 56799999987
Q ss_pred CcEEeccCCC----CeEEEEeCceeecCCCCCCcEEEEEEEc
Q 010015 294 CTVSHESNHE----HIKEHTVGTISWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 294 c~~~h~~~~~----~i~Eitv~S~S~~~g~~~Pgf~llsl~~ 331 (520)
.-..+..+.. ++. +.-+|+.-+. +..|||++..+++
T Consensus 405 ~f~v~yde~~~~p~~v~-~i~~svtty~-~~~p~yr~y~~~~ 444 (577)
T KOG3770|consen 405 EFRVFYDEETGHPIAVA-YIGPSVTTYY-NKNPGYRIYAVDS 444 (577)
T ss_pred eEEEEeccccCCceeee-eccccceehh-ccCCCceecccCc
Confidence 6555443321 111 2224444332 4579999988873
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.1e-09 Score=109.39 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=35.8
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCC
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY 115 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~ 115 (520)
+.+||+++||+||+.....+.+ ..+.+ ..+.+.+.. +...+||+|+++|||+|....
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r------~~D~~---~~f~eil~~-a~~~~vD~VLiaGDLFd~~~P 58 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVR------GDDSW---NTFEEVLQI-AKEQDVDMILLGGDLFHENKP 58 (405)
T ss_pred CceEEEEEcCCCCCCccCCchh------hhhHH---HHHHHHHHH-HHHcCCCEEEECCccCCCCCC
Confidence 4699999999999743211100 01111 123444433 356789999999999998754
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-08 Score=92.00 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCcEEEECCccCCCcE
Q 010015 272 SSNRLLDLIKPVLVLSGHDHDQCTV 296 (520)
Q Consensus 272 ~s~~LL~~l~p~lVfsGH~H~~c~~ 296 (520)
...++++..+++++|+||+|.....
T Consensus 82 ~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 82 AFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred HHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3455666678899999999987654
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-08 Score=98.34 Aligned_cols=81 Identities=22% Similarity=0.293 Sum_probs=46.5
Q ss_pred CCCCCEEEEcCCcCCCCC---CCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHH
Q 010015 97 PFKPDVILFLGDHFDGGP---YLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE 173 (520)
Q Consensus 97 ~~~PD~VI~lGDL~d~G~---~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~ 173 (520)
..+||.++++||++|.-. ....+.+......+.+.+ ..+.++++++||||..... -+...
T Consensus 28 ~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~v~~v~GNHD~~~~~----------~~~~~ 90 (217)
T cd07398 28 LGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-------DRGTRVYYVPGNHDFLLGD----------FFAEE 90 (217)
T ss_pred cCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-------HCCCeEEEECCCchHHHHh----------HHHHH
Confidence 468999999999997421 111222222223344333 2568999999999964321 12222
Q ss_pred hCC----cce-EEEeCCEEEEEEeCC
Q 010015 174 FGK----RNY-RFTVGKVEFIVVDAQ 194 (520)
Q Consensus 174 Fg~----~ny-~~~ig~~~fV~LDS~ 194 (520)
.+. ... .+.+++.++.+.-.-
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~HG~ 116 (217)
T cd07398 91 LGLILLPDPLVHLELDGKRILLEHGD 116 (217)
T ss_pred cCCEEeccceEEEeeCCeEEEEECCC
Confidence 221 122 567778888777553
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.5e-08 Score=105.51 Aligned_cols=224 Identities=19% Similarity=0.233 Sum_probs=108.3
Q ss_pred cccCCCCCCC---CCCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHH-HhhCCCCCCEEEEcCCcC
Q 010015 35 SCTWPSSSSM---DGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFF-ASILPFKPDVILFLGDHF 110 (520)
Q Consensus 35 ~C~W~~~~~~---~~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~-~~~~~~~PD~VI~lGDL~ 110 (520)
.+-||..+.. .......+++++||+|++...... ..+..+ .++ +..... ......+||.+|++||++
T Consensus 225 ~i~~p~~p~~~~~~~~~~~~~i~~ISDlHlgs~~~~~-------~~l~~l-i~~-L~g~~~~~~~~~~~~d~lVIaGDiv 295 (504)
T PRK04036 225 EIIRPDVPRTKEPPTKDEKVYAVFISDVHVGSKEFLE-------DAFEKF-IDW-LNGEVGNEEEIASRVKYLIIAGDLV 295 (504)
T ss_pred EEECCCCCccCCCCcCCCccEEEEEcccCCCCcchhH-------HHHHHH-HHH-HhCCCccchhhhhcCCEEEEeCccc
Confidence 4567765422 223467999999999997542210 001111 000 000000 000156899999999999
Q ss_pred CCCC-CCC-HH-----HHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcc-----
Q 010015 111 DGGP-YLS-DE-----EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRN----- 178 (520)
Q Consensus 111 d~G~-~~s-~~-----e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~n----- 178 (520)
|... +.. ++ ...+.++.+.+.+..- ...+|++++|||||......-+ +.....+.+.|...+
T Consensus 296 d~~~~~p~~~~~~~~~~~~~~~~~l~~~L~~L----~~~i~V~~ipGNHD~~~~~lPQ--~~l~~~l~~~l~~~~v~~ls 369 (504)
T PRK04036 296 DGIGIYPGQEEELEIVDIYEQYEAAAEYLKQI----PEDIKIIISPGNHDAVRQAEPQ--PAFPEEIRSLFPEHNVTFVS 369 (504)
T ss_pred ccccCCccchhhccchhhHHHHHHHHHHHHhh----hcCCeEEEecCCCcchhhccCC--CCccHHHHHhcCcCCeEEec
Confidence 8521 101 11 1112233444444421 2468999999999964321111 111123333343211
Q ss_pred --eEEEeCCEEEEEEeCCCCCC---CCCCCCCHHHHHHHHHhhccCCCCCeEEEEcc-CCCCCCCCCCCCCCCCcccchh
Q 010015 179 --YRFTVGKVEFIVVDAQTLDG---HPEGNLAAATWDFVKNVSIDFQLLPRVLLTHI-PLYRRDETPCGPHRSSPIINQR 252 (520)
Q Consensus 179 --y~~~ig~~~fV~LDS~~l~g---~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~-PL~~~~~~~Cg~~r~~~~~~~~ 252 (520)
+.+.+++.++++.-...++. .-.+.-.......+++.+... |. |.+. +..+|-|....+
T Consensus 370 NP~~i~l~G~~iLl~HG~~idDl~~~i~~~s~~~p~~~m~~~l~~r---------HlaPt~p-~~~~~~p~~~D~----- 434 (504)
T PRK04036 370 NPALVNLHGVDVLIYHGRSIDDVISLIPGASYEKPGKAMEELLKRR---------HLAPIYG-GRTPIAPEKEDY----- 434 (504)
T ss_pred CCeEEEECCEEEEEECCCCHHHHHhhcccccccCHHHHHHHHHHhc---------ccCCCCC-CCEEeCcCCCCC-----
Confidence 24566777776654322110 000000111234455544321 32 3332 222343311111
Q ss_pred hhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceee
Q 010015 253 IVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISW 315 (520)
Q Consensus 253 ~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~ 315 (520)
+ +++. .|+++++||.|.+....+ +++..+++|||+-
T Consensus 435 ---------------l-------vi~~-~Pdv~~~GH~H~~~~~~~----~g~~~IN~gsf~~ 470 (504)
T PRK04036 435 ---------------L-------VIDE-VPDIFHTGHVHINGYGKY----RGVLLINSGTWQA 470 (504)
T ss_pred ---------------E-------EEec-CCCEEEeCCCCccceEEE----CCEEEEECCcccc
Confidence 1 1222 279999999999766554 6799999999873
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=98.84 E-value=2.2e-07 Score=100.64 Aligned_cols=229 Identities=17% Similarity=0.200 Sum_probs=103.0
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCC---CC---------
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGP---YL--------- 116 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~---~~--------- 116 (520)
..+||++.|+-+..... ..++..+....+||++|++||.+.... +.
T Consensus 104 ~~~r~a~~SC~~~~~~~----------------------~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r 161 (453)
T PF09423_consen 104 DPFRFAFGSCQNYEDGY----------------------FPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGR 161 (453)
T ss_dssp --EEEEEE----CCC-------------------------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S--
T ss_pred CceEEEEECCCCcccCh----------------------HHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccc
Confidence 46999999999863211 123334444468999999999996442 10
Q ss_pred ------CHHHHHHHHHHHHHHhccccC-CCCCCceEEEccCCCCCCccccc---CCC----H-------HHHHHHHHHhC
Q 010015 117 ------SDEEWQESLNRFKHIFGLKSQ-DRFRDIRVHFLPGNHDNGYAALL---SHK----P-------EIVRRYEKEFG 175 (520)
Q Consensus 117 ------s~~e~~~~~~Rf~~if~~~~~-~~~~~iPv~~vpGNHDig~~~~~---~~~----~-------~~~~rf~~~Fg 175 (520)
.......+..|++..+..+.- .....+|++.+.-.||+..+... ... . ...+.|..+..
T Consensus 162 ~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p 241 (453)
T PF09423_consen 162 APEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQP 241 (453)
T ss_dssp ---SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS-
T ss_pred ccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcC
Confidence 011122233333332221100 00246899999999999643220 000 1 11222322211
Q ss_pred -----------CcceEEEeCC-EEEEEEeCCCCCCC----------------CCCCCCHHHHHHHHHhhccCCCCCeEEE
Q 010015 176 -----------KRNYRFTVGK-VEFIVVDAQTLDGH----------------PEGNLAAATWDFVKNVSIDFQLLPRVLL 227 (520)
Q Consensus 176 -----------~~ny~~~ig~-~~fV~LDS~~l~g~----------------~~g~i~~~ql~wL~~ll~~~~~~p~ILl 227 (520)
..++.|.+|+ +.|++||+..+-.. ...-+.++|++||++.+.......+||.
T Consensus 242 ~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~a~~kvi~ 321 (453)
T PF09423_consen 242 VRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQATWKVIG 321 (453)
T ss_dssp --GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH--SSEEEEE
T ss_pred ccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCCCcEEEEE
Confidence 1246789999 99999999755331 1234789999999998877667889999
Q ss_pred EccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC-----CcEEEECCccCCCcEEeccCC
Q 010015 228 THIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK-----PVLVLSGHDHDQCTVSHESNH 302 (520)
Q Consensus 228 tH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~-----p~lVfsGH~H~~c~~~h~~~~ 302 (520)
+-+|+....... .. .....+. + .+.. =+..+++|++.++ ..++|||+.|..+........
T Consensus 322 s~v~~~~~~~~~--~~-~~~~~~~-------d---~W~g--~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~ 386 (453)
T PF09423_consen 322 SSVPFSPLNFPD--AA-EGLPFNM-------D---SWDG--YPAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDD 386 (453)
T ss_dssp -SS--S---SS---SS--S--EET-------T---SGGG--SHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESST
T ss_pred eCCceecccccc--cc-cccccCC-------C---chhh--CHHHHHHHHHHHHhhCCCCEEEEecCcchheeeeccccc
Confidence 999887643210 00 0000000 0 0111 1245778888883 268999999998776654322
Q ss_pred --------CCeEEEEeCcee
Q 010015 303 --------EHIKEHTVGTIS 314 (520)
Q Consensus 303 --------~~i~Eitv~S~S 314 (520)
..+.|+++++++
T Consensus 387 ~~~~~~~~~~~~Ef~~s~vt 406 (453)
T PF09423_consen 387 ADPPDGPGSVGVEFTSSSVT 406 (453)
T ss_dssp T---TTS-EEEEEEE---SS
T ss_pred ccccCCCCCeEEEEECCCcc
Confidence 136788888865
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-07 Score=91.83 Aligned_cols=30 Identities=20% Similarity=0.135 Sum_probs=24.8
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCcee
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
.|+++|+||.|....... +++..+++|||.
T Consensus 191 ~p~vii~Gh~h~~~~~~~----~~~~~vn~Gsf~ 220 (243)
T cd07386 191 VPDILHTGHVHVYGVGVY----RGVLLVNSGTWQ 220 (243)
T ss_pred CCCEEEECCCCchHhEEE----CCEEEEECCCCc
Confidence 579999999999766654 578899999976
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.1e-06 Score=85.26 Aligned_cols=173 Identities=15% Similarity=0.144 Sum_probs=92.7
Q ss_pred CCCCCCEEEEcCCcCCCCCCCCHH-------HHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHH
Q 010015 96 LPFKPDVILFLGDHFDGGPYLSDE-------EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVR 168 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~s~~-------e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~ 168 (520)
...++|++|++||+...... ++. .|.. ...|.+.+... ...++|+++|.||||- +.. +.
T Consensus 25 ~~~~~D~lI~~GDf~~~~~~-~d~~~~~~p~k~~~-~~~f~~~~~g~---~~~p~~t~fi~GNHE~-~~~--------l~ 90 (262)
T cd00844 25 EGTKVDLLICCGDFQAVRNE-ADLKCMAVPPKYRK-MGDFYKYYSGE---KKAPILTIFIGGNHEA-SNY--------LW 90 (262)
T ss_pred cCCCCcEEEEcCCCCCcCCc-chhhhhccchhhhh-hhhHHHHhcCC---ccCCeeEEEECCCCCC-HHH--------HH
Confidence 34579999999999643321 111 1111 23355555421 1367888999999993 221 11
Q ss_pred HHHHHhCC---c-------ceEEEeCCEEEEEEeCCCCCCCC------CCCCCHHHHHHH--------HHhhccCCCCCe
Q 010015 169 RYEKEFGK---R-------NYRFTVGKVEFIVVDAQTLDGHP------EGNLAAATWDFV--------KNVSIDFQLLPR 224 (520)
Q Consensus 169 rf~~~Fg~---~-------ny~~~ig~~~fV~LDS~~l~g~~------~g~i~~~ql~wL--------~~ll~~~~~~p~ 224 (520)
.. ..|. . ...+.++|++|.+|....-..+. ....++.++..+ +++.. .....-
T Consensus 91 ~l--~~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~-~~~~vD 167 (262)
T cd00844 91 EL--PYGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQ-LKQPID 167 (262)
T ss_pred hh--cCCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHh-cCCCCc
Confidence 11 1221 1 23567889999998764211111 123345544332 22221 123457
Q ss_pred EEEEccCCCCCCCCC-C-CCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCc
Q 010015 225 VLLTHIPLYRRDETP-C-GPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCT 295 (520)
Q Consensus 225 ILltH~PL~~~~~~~-C-g~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~ 295 (520)
|++||.|+....+.. . .-.+..|.+.+. ...+.+.......|++.++|+..||||.|...+
T Consensus 168 IlLSHdWP~gI~~~~~~~~l~~~~~~~~~~----------~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~ 230 (262)
T cd00844 168 IFLSHDWPRGIYKHGDKKQLLRKKPFFRQD----------IESGTLGSPAAEELLKHLKPRYWFSAHLHVKFA 230 (262)
T ss_pred EEEeCCCCcchhhccchHHhhhcCccchhc----------ccccCCCCHHHHHHHHHhCCCEEEEecCCcccc
Confidence 999999998753210 0 001111111000 001123445677899999999999999998655
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.3e-07 Score=100.44 Aligned_cols=88 Identities=23% Similarity=0.221 Sum_probs=52.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+||++.||+||+. .++..+. ....+.. .+..++. .+...++|+||+.|||+|..+.... ...+|.+
T Consensus 1 mkilHtSD~HLG~-~~~~~~~--r~~d~~~-----~f~~~l~-~a~~~~vD~vliAGDlFd~~~Ps~~-----a~~~~~~ 66 (390)
T COG0420 1 MKILHTSDWHLGS-KQLNLPS--RLEDQKK-----AFDELLE-IAKEEKVDFVLIAGDLFDTNNPSPR-----ALKLFLE 66 (390)
T ss_pred CeeEEecccccch-hhccCcc--chHHHHH-----HHHHHHH-HHHHccCCEEEEccccccCCCCCHH-----HHHHHHH
Confidence 5899999999983 2222111 1111111 1223332 2456688999999999998754322 2233444
Q ss_pred HhccccCCCCCCceEEEccCCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.|.... ..++|+|.|+||||-.
T Consensus 67 ~l~~l~---~~~Ipv~~I~GNHD~~ 88 (390)
T COG0420 67 ALRRLK---DAGIPVVVIAGNHDSP 88 (390)
T ss_pred HHHHhc---cCCCcEEEecCCCCch
Confidence 444211 3679999999999954
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.5e-07 Score=94.25 Aligned_cols=88 Identities=20% Similarity=0.187 Sum_probs=50.3
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+|++++||+||+...... +. .... ...+.+.+. .+...+||+|+++||++|..... .... ..+.++.+
T Consensus 1 mkilh~SD~Hlg~~~~~~----~~---~~~~--~~~l~~l~~-~~~~~~~D~lli~GDi~d~~~p~-~~~~-~~~~~~l~ 68 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGV----SR---LAEQ--KAFLDDLLE-FAKAEQIDALLVAGDVFDTANPP-AEAQ-ELFNAFFR 68 (253)
T ss_pred CEEEEEhhhcCCCccCCC----Ch---HHHH--HHHHHHHHH-HHHHcCCCEEEECCccCCCCCCC-HHHH-HHHHHHHH
Confidence 589999999997543221 11 1111 112344433 33456899999999999977322 2111 11222322
Q ss_pred HhccccCCCCCCceEEEccCCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.+.. ..++|+++++||||..
T Consensus 69 ~l~~-----~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 69 NLSD-----ANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHh-----cCCceEEEEccCCCCh
Confidence 2221 1238999999999963
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-07 Score=100.44 Aligned_cols=86 Identities=22% Similarity=0.290 Sum_probs=50.9
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHH-HHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQ-ESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~-~~~~Rf~ 129 (520)
+|++++||+||+...... . ..... ...+.+.. ..+...+||+||++||++|.+.. ..+. ..+.+|.
T Consensus 1 mkilh~SDlHlG~~~~~~--~--~~~~~-----~~~l~~l~-~~i~~~~~D~viIaGDifD~~~p---~~~a~~~~~~~l 67 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSK--S--RAAEH-----QAFLDWLL-EQVQEHQVDAIIVAGDIFDTGSP---PSYARELYNRFV 67 (407)
T ss_pred CEEEEEcccCCCCcccCc--c--cHHHH-----HHHHHHHH-HHHHhcCCCEEEECCccccCCCC---cHHHHHHHHHHH
Confidence 589999999997432111 0 10010 11122222 33456799999999999998732 2222 2233343
Q ss_pred HHhccccCCCCCCceEEEccCCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
..+. ..++|+++|+||||..
T Consensus 68 ~~L~------~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 68 VNLQ------QTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHH------hcCCcEEEEcCCCCCh
Confidence 3333 2468999999999953
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.7e-06 Score=80.32 Aligned_cols=55 Identities=20% Similarity=0.243 Sum_probs=41.6
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
..+-.....++++.||+|....... +++..++=||.|-.-+....+|.++.+.+.
T Consensus 102 ~~la~~~~~Dvli~GHTH~p~~~~~----~~i~~vNPGS~s~pr~~~~~sy~il~~~~~ 156 (172)
T COG0622 102 EYLAKELGADVLIFGHTHKPVAEKV----GGILLVNPGSVSGPRGGNPASYAILDVDNL 156 (172)
T ss_pred HHHHHhcCCCEEEECCCCcccEEEE----CCEEEEcCCCcCCCCCCCCcEEEEEEcCCC
Confidence 3344445569999999999887766 679999999999554443349999998765
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-06 Score=78.17 Aligned_cols=179 Identities=21% Similarity=0.256 Sum_probs=97.0
Q ss_pred eEEEEEeCCCCCCCCC--C--CCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTS--L--HLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 51 ~rilvISDpHL~~~~~--~--~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
+|+.-|||+||.-.-. . -+.++ . + -+....+.|+..+. .-|.|++.||+.-.-+ -+|-++ --
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W--~----g--h~ekI~k~W~~~v~--~eDiVllpGDiSWaM~---l~ea~~-Dl 66 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPW--S----G--HHEKIKKHWRSKVS--PEDIVLLPGDISWAMR---LEEAEE-DL 66 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcc--c----C--chHHHHHHHHhcCC--hhhEEEecccchhhee---chhhhh-hh
Confidence 3688899999943211 0 01111 0 1 12234455555443 3499999999974321 111111 11
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCc----ceEEEeCCEEEEEE---eCCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKR----NYRFTVGKVEFIVV---DAQTLDGH 199 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~----ny~~~ig~~~fV~L---DS~~l~g~ 199 (520)
||... ++-.-|.+-||||+.... ..+..+...+. |..|.++|+.+++. ||.++...
T Consensus 67 ~~i~~---------LPG~K~m~rGNHDYWw~s--------~skl~n~lp~~l~~~n~~f~l~n~aI~G~RgW~s~~~~~e 129 (230)
T COG1768 67 RFIGD---------LPGTKYMIRGNHDYWWSS--------ISKLNNALPPILFYLNNGFELLNYAIVGVRGWDSPSFDSE 129 (230)
T ss_pred hhhhc---------CCCcEEEEecCCccccch--------HHHHHhhcCchHhhhccceeEeeEEEEEeecccCCCCCcC
Confidence 24332 233468899999976432 23444444432 44577788777665 44432211
Q ss_pred CCCCCCHH-HHHHHHHhh-------cc--CCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccC
Q 010015 200 PEGNLAAA-TWDFVKNVS-------ID--FQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYIT 269 (520)
Q Consensus 200 ~~g~i~~~-ql~wL~~ll-------~~--~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls 269 (520)
.++++ ..-|+++.. .+ ......|+++|.|++.+++++ | |
T Consensus 130 ---~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~-~-----~---------------------- 178 (230)
T COG1768 130 ---PLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP-G-----P---------------------- 178 (230)
T ss_pred ---ccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC-c-----c----------------------
Confidence 12322 233343311 11 124568999999999876532 1 1
Q ss_pred HHHHHHHHHHhCCcEEEECCccCCC
Q 010015 270 EESSNRLLDLIKPVLVLSGHDHDQC 294 (520)
Q Consensus 270 ~e~s~~LL~~l~p~lVfsGH~H~~c 294 (520)
..++++..++..++.||.|--.
T Consensus 179 ---~sevlee~rv~~~lyGHlHgv~ 200 (230)
T COG1768 179 ---FSEVLEEGRVSKCLYGHLHGVP 200 (230)
T ss_pred ---hHHHHhhcceeeEEeeeccCCC
Confidence 2357777788999999999754
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.8e-07 Score=86.81 Aligned_cols=88 Identities=27% Similarity=0.386 Sum_probs=48.5
Q ss_pred EEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhc
Q 010015 54 AVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFG 133 (520)
Q Consensus 54 lvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~ 133 (520)
+++||+||+.......... . +.....+..+++. .+.+...+||.|+++||++++.......++.. .. +....
T Consensus 1 l~isDlHlG~~~~~~~~g~-~---~p~~~~~~~~~~l-~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~-~~-~~~~~- 72 (172)
T cd07391 1 LVVADLHLGKEEELRRRGI-L---LPRGQTEDTLERL-DRLIEEYGPERLIILGDLKHSFGGLSRQEFEE-VA-FLRLL- 72 (172)
T ss_pred CEeEeeccchHHHHHhcCC-c---CCcccHHHHHHHH-HHHHHhcCCCEEEEeCcccccccccCHHHHHH-HH-HHHhc-
Confidence 5899999986432210000 0 0000011122332 23456678999999999998664333333222 11 11111
Q ss_pred cccCCCCCCceEEEccCCCCCC
Q 010015 134 LKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 134 ~~~~~~~~~iPv~~vpGNHDig 155 (520)
..++|+++++||||..
T Consensus 73 ------~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 73 ------AKDVDVILIRGNHDGG 88 (172)
T ss_pred ------cCCCeEEEEcccCccc
Confidence 3578999999999964
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-06 Score=85.57 Aligned_cols=211 Identities=16% Similarity=0.227 Sum_probs=110.4
Q ss_pred EEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHH---HhhCCCCCCEEEEcCCcCCCCCCCCH-----------
Q 010015 53 VAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFF---ASILPFKPDVILFLGDHFDGGPYLSD----------- 118 (520)
Q Consensus 53 ilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~---~~~~~~~PD~VI~lGDL~d~G~~~s~----------- 118 (520)
++++||+|+++..... . .+ ++..|+ +.-... ......+...+|+.||.+++-....+
T Consensus 2 i~~vSgL~ig~~~~~~-----~--~l-~ll~d~-L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~ 72 (257)
T cd07387 2 IALVSGLGLGGNAESS-----L--SL-QLLVDW-LTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKK 72 (257)
T ss_pred EEEEcccccCCCccch-----H--HH-HHHHHH-hcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccc
Confidence 7999999998763221 1 11 111221 110000 00123466789999999986422111
Q ss_pred --HHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH--HhC----Ccc-eEEEeCCEEEE
Q 010015 119 --EEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK--EFG----KRN-YRFTVGKVEFI 189 (520)
Q Consensus 119 --~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~--~Fg----~~n-y~~~ig~~~fV 189 (520)
..-.+.++.+.+.+..- ...+||..+|||||-.....-+. +-...-|.+ .++ -+| |.|+++|++|.
T Consensus 73 ~~~~~~~~~~~ld~~l~~l----~~~i~V~imPG~~Dp~~~~lPQq-plh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vL 147 (257)
T cd07387 73 SSAASVEAVKELDNFLSQL----ASSVPVDLMPGEFDPANHSLPQQ-PLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVL 147 (257)
T ss_pred cchhhHHHHHHHHHHHHhh----hcCCeEEECCCCCCcccccCCCC-CCCHHHhhcccccCCcEEeCCCeEEEECCEEEE
Confidence 01122345555555432 36789999999999653321111 100112211 111 122 57899999988
Q ss_pred EEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCC-CCCcccchhhhccCCCccchhcccc
Q 010015 190 VVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPH-RSSPIINQRIVRTGHSQEILYQNYI 268 (520)
Q Consensus 190 ~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~-r~~~~~~~~~~~~~~~~g~~yqn~l 268 (520)
+-..+.++.-....-.+..++.+++.+.- .|.-+-.++-..|-|. +..|+
T Consensus 148 gtsGqni~Di~ky~~~~~~l~~me~~L~w---------rHlaPTaPDTL~~yP~~~~Dpf-------------------- 198 (257)
T cd07387 148 GTSGQNVDDILKYSSLESRLDILERTLKW---------RHIAPTAPDTLWCYPFTDRDPF-------------------- 198 (257)
T ss_pred EECCCCHHHHHHhCCCCCHHHHHHHHHHh---------cccCCCCCCccccccCCCCCce--------------------
Confidence 87665432110000012335566665432 2554444444467652 22222
Q ss_pred CHHHHHHHHHHhCCcEEEECCccCCCcEEecc-CCCCeEEEEeCcee
Q 010015 269 TEESSNRLLDLIKPVLVLSGHDHDQCTVSHES-NHEHIKEHTVGTIS 314 (520)
Q Consensus 269 s~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~-~~~~i~Eitv~S~S 314 (520)
+++. -|.++|+||-|.+....... .+..++-++||+||
T Consensus 199 -------vi~~-~PhVyf~Gnq~~f~t~~~~~~~~~~v~lv~vP~Fs 237 (257)
T cd07387 199 -------ILEE-CPHVYFAGNQPKFGTKLVEGEEGQRVLLVCVPSFS 237 (257)
T ss_pred -------eecC-CCCEEEeCCCcceeeeEEEcCCCCeEEEEEeCCcC
Confidence 2222 28999999999886554432 24569999999997
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.7e-05 Score=77.16 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=27.4
Q ss_pred CCCC-EEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 98 FKPD-VILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 98 ~~PD-~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
.+|| +++.+||+++++... .+.+ .+...+.+. ..+. -+.++||||+.++
T Consensus 36 ~~~~~l~l~~GD~~~g~~~~---~~~~-g~~~~~~l~------~l~~-d~~~~GNHefd~g 85 (257)
T cd07406 36 ENPNTLVLFSGDVLSPSLLS---TATK-GKQMVPVLN------ALGV-DLACFGNHEFDFG 85 (257)
T ss_pred cCCCEEEEECCCccCCccch---hhcC-CccHHHHHH------hcCC-cEEeecccccccC
Confidence 4677 999999999866321 1110 011222222 1222 3668999998665
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00011 Score=72.94 Aligned_cols=51 Identities=22% Similarity=0.288 Sum_probs=28.9
Q ss_pred CCCCCC-EEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 96 LPFKPD-VILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 96 ~~~~PD-~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
+..+|| .++.+||+++++.......... ..+++. ..+ ..+.++||||+.++
T Consensus 33 ~~~~~~~l~v~~GD~~~~~~~~~~~~~~~----~~~~l~------~~g-~d~~~~GNHe~d~g 84 (252)
T cd00845 33 RAENENTLLLDAGDNFDGSPPSTATKGEA----NIELMN------ALG-YDAVTIGNHEFDYG 84 (252)
T ss_pred HhcCCCeEEEeCCccCCCccchhccCCcH----HHHHHH------hcC-CCEEeecccccccc
Confidence 334688 7789999998774322111111 223332 122 24567899998765
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00018 Score=72.89 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=16.8
Q ss_pred HHHHHHHh-CCcEEEECCccCCCc
Q 010015 273 SNRLLDLI-KPVLVLSGHDHDQCT 295 (520)
Q Consensus 273 s~~LL~~l-~p~lVfsGH~H~~c~ 295 (520)
..+|.+.+ ..++||+||+|....
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~~~~ 232 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHRRFP 232 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCccccc
Confidence 45566665 348999999998653
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00019 Score=72.34 Aligned_cols=15 Identities=33% Similarity=0.689 Sum_probs=12.4
Q ss_pred CCCEEE-EcCCcCCCC
Q 010015 99 KPDVIL-FLGDHFDGG 113 (520)
Q Consensus 99 ~PD~VI-~lGDL~d~G 113 (520)
+||.++ .+||++++.
T Consensus 50 ~~~~l~l~~GD~~~gs 65 (264)
T cd07411 50 NPNTLLLDGGDTWQGS 65 (264)
T ss_pred CCCeEEEeCCCccCCC
Confidence 789884 699999876
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.1e-06 Score=81.92 Aligned_cols=87 Identities=21% Similarity=0.217 Sum_probs=48.9
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
-+.++|||+||+-...+... ... +.....+..+.+.. ..+...+||.|+++||+++..... .++.+ +.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~--Gi~--~P~~~~~~~l~rl~-~li~~~~~d~vIi~GDl~h~~~~~--~~~~~----~~~ 83 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQ--GVM--VPGFQFREIIERAL-SIADKYGIEALIINGDLKHEFKKG--LEWRF----IRE 83 (225)
T ss_pred cCeEEEEeccCCCHHHHHhc--CCc--CChhHHHHHHHHHH-HHHhhcCCCEEEEcCccccccCCh--HHHHH----HHH
Confidence 35899999999854321100 000 00001111233332 345677899999999999765321 33333 333
Q ss_pred HhccccCCCCCCceEEEccCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.+. ....+++.|+||||.
T Consensus 84 ~l~------~~~~~v~~V~GNHD~ 101 (225)
T TIGR00024 84 FIE------VTFRDLILIRGNHDA 101 (225)
T ss_pred HHH------hcCCcEEEECCCCCC
Confidence 333 234589999999994
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=5.1e-05 Score=73.89 Aligned_cols=51 Identities=31% Similarity=0.297 Sum_probs=32.1
Q ss_pred CCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 97 PFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 97 ~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
..+.|.++++||++|.|+. ..+..+.+.++..... ..+.+++.+.||||..
T Consensus 30 ~~~~d~lv~lGD~vdrG~~--~~~vl~~l~~l~~~~~------~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 30 IGGSTHLVQLGDIFDRGPD--VIEILWLLYKLEQEAA------KAGGKVHFLLGNHELM 80 (208)
T ss_pred cCCCcEEEEECCCcCCCcC--HHHHHHHHHHHHHHHH------hcCCeEEEeeCCCcHH
Confidence 3478999999999998852 2332222222221111 2356899999999964
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00029 Score=70.65 Aligned_cols=48 Identities=23% Similarity=0.374 Sum_probs=27.7
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
++++++..||++++....+...... ..+++. ..+..+ .++||||+.++
T Consensus 37 ~~~l~l~~GD~~~gs~~~~~~~g~~----~~~~ln------~~g~d~-~~~GNHefd~G 84 (257)
T cd07408 37 DNDLLVDAGDAIQGLPISDLDKGET----IIKIMN------AVGYDA-VTPGNHEFDYG 84 (257)
T ss_pred CCEEEEeCCCcCCCchhhhhcCCcH----HHHHHH------hcCCcE-EccccccccCC
Confidence 6899999999998753211100011 223332 233444 46799998765
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00027 Score=75.49 Aligned_cols=89 Identities=26% Similarity=0.311 Sum_probs=52.4
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhh----CCCCCCEEEEcCCcCCCCCCC--CHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI----LPFKPDVILFLGDHFDGGPYL--SDEE 120 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~----~~~~PD~VI~lGDL~d~G~~~--s~~e 120 (520)
....++++++||.|.+... |..+.+ .+-+.-.. ...+..++++.||++|+..-. ...+
T Consensus 222 ~~e~v~v~~isDih~GSk~---------------F~~~~f-~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~e 285 (481)
T COG1311 222 GDERVYVALISDIHRGSKE---------------FLEDEF-EKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEE 285 (481)
T ss_pred CCcceEEEEEeeeecccHH---------------HHHHHH-HHHHHHhcCCcccccceEEEEEecccccccccccCcccc
Confidence 4567999999999997321 111111 11110000 234567999999999964211 0111
Q ss_pred -----HHHHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 121 -----WQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 121 -----~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
-.++|+.|.+.|..- ...+.++..|||||-.
T Consensus 286 L~i~di~~qy~~~A~~L~~v----p~~I~v~i~PGnhDa~ 321 (481)
T COG1311 286 LVIADIYEQYEELAEFLDQV----PEHIKVFIMPGNHDAV 321 (481)
T ss_pred cccccchHHHHHHHHHHhhC----CCCceEEEecCCCCcc
Confidence 112466677777643 4688899999999954
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.2e-05 Score=75.49 Aligned_cols=42 Identities=31% Similarity=0.433 Sum_probs=29.3
Q ss_pred CCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 98 FKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 98 ~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.++|.|+++||+++.+ ....+ . +.+. ..+.|++.|+||||..
T Consensus 41 ~~~d~vi~~GDl~~~~---~~~~~---~----~~l~------~~~~~~~~v~GNHD~~ 82 (168)
T cd07390 41 GPDDTVYHLGDFSFGG---KAGTE---L----ELLS------RLNGRKHLIKGNHDSS 82 (168)
T ss_pred CCCCEEEEeCCCCCCC---ChHHH---H----HHHH------hCCCCeEEEeCCCCch
Confidence 3689999999999987 33322 1 2222 2345899999999953
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.1e-05 Score=76.16 Aligned_cols=93 Identities=24% Similarity=0.326 Sum_probs=57.4
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 50 YDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 50 ~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
.-+.+++||+||+=..++..+ . . .+.++.++. ..+.+...+...+|+.+|++||+..+.......|+.. ..+|.
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~-G-i--~lP~~~~~~-~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~-~~~f~ 92 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARR-G-I--NLPRYQTDR-ILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEE-VREFL 92 (235)
T ss_pred cCcEEEEEecccchhHHHHhc-C-c--ccCchhHHH-HHHHHHHHHHhcCCCEEEEcCccccccCccccccHHH-HHHHH
Confidence 357999999999744332100 0 0 011222222 2334444577889999999999998775444444443 45566
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCc
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~ 156 (520)
+.... . -+..+.||||-+.
T Consensus 93 ~~~~~-------~-evi~i~GNHD~~i 111 (235)
T COG1407 93 ELLDE-------R-EVIIIRGNHDNGI 111 (235)
T ss_pred HHhcc-------C-cEEEEeccCCCcc
Confidence 66542 1 4999999999543
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00021 Score=66.08 Aligned_cols=46 Identities=28% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCC
Q 010015 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD 153 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHD 153 (520)
+..+.|++|++||++.... ++++|..+ +... +...+|+|.+-|||.
T Consensus 23 k~gpFd~~ic~Gdff~~~~--~~~~~~~y-------~~g~---~~~pipTyf~ggn~~ 68 (150)
T cd07380 23 KKGPFDALLCVGDFFGDDE--DDEELEAY-------KDGS---KKVPIPTYFLGGNNP 68 (150)
T ss_pred ccCCeeEEEEecCccCCcc--chhhHHHH-------hcCC---ccCCCCEEEECCCCC
Confidence 5668999999999997652 22333332 2211 146789999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0013 Score=79.42 Aligned_cols=79 Identities=14% Similarity=0.026 Sum_probs=41.9
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEE-cCCcCCCCCCCCHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILF-LGDHFDGGPYLSDEEWQESLNR 127 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~-lGDL~d~G~~~s~~e~~~~~~R 127 (520)
..++|++++|.|- ...+ . .++ ...++. ++..+||.+++ .||++++....+.......
T Consensus 659 ~~l~Il~~nD~Hg--~l~g------~-~r~---------~~~i~~-~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~--- 716 (1163)
T PRK09419 659 WELTILHTNDFHG--HLDG------A-AKR---------VTKIKE-VKEENPNTILVDAGDVYQGSLYSNLLKGLPV--- 716 (1163)
T ss_pred eEEEEEEEeeccc--CCCC------H-HHH---------HHHHHH-HHhhCCCeEEEecCCCCCCcchhhhcCChHH---
Confidence 4599999999992 1111 1 111 122222 23346888877 9999987632111111122
Q ss_pred HHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 128 FKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 128 f~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
.+.+. ..+. -+.++||||+.++
T Consensus 717 -~~~ln------~lg~-d~~~~GNHEfd~g 738 (1163)
T PRK09419 717 -LKMMK------EMGY-DASTFGNHEFDWG 738 (1163)
T ss_pred -HHHHh------CcCC-CEEEecccccccC
Confidence 22222 1122 2559999998765
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.79 E-value=8.9e-05 Score=72.78 Aligned_cols=74 Identities=24% Similarity=0.419 Sum_probs=45.0
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHH----HHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQ----ESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF 174 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~----~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F 174 (520)
+.|.++++||++|.= ..+.+|. +..+.+.+.- ..+.|+|+++||||.-. .++|.+.+
T Consensus 29 ~ad~lyilGDifd~w--~g~~~~~~~~~~V~~~l~~~a-------~~G~~v~~i~GN~Dfll----------~~~f~~~~ 89 (237)
T COG2908 29 QADALYILGDIFDGW--IGDDEPPQLHRQVAQKLLRLA-------RKGTRVYYIHGNHDFLL----------GKRFAQEA 89 (237)
T ss_pred cCcEEEEechhhhhh--hcCCcccHHHHHHHHHHHHHH-------hcCCeEEEecCchHHHH----------HHHHHhhc
Confidence 679999999999742 1122222 2223333332 46789999999999532 36788888
Q ss_pred CC-----cceEEEeCCEEEEEE
Q 010015 175 GK-----RNYRFTVGKVEFIVV 191 (520)
Q Consensus 175 g~-----~ny~~~ig~~~fV~L 191 (520)
|. ..-..++-|-.++++
T Consensus 90 g~~~l~~~~~~~~l~g~~~Ll~ 111 (237)
T COG2908 90 GGMTLLPDPIVLDLYGKRILLA 111 (237)
T ss_pred CceEEcCcceeeeecCcEEEEE
Confidence 82 222344445455554
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0027 Score=64.83 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=15.6
Q ss_pred HHHHhhccCCCCCeEEEEccCCCC
Q 010015 211 FVKNVSIDFQLLPRVLLTHIPLYR 234 (520)
Q Consensus 211 wL~~ll~~~~~~p~ILltH~PL~~ 234 (520)
|+.+.+.+....-+|+++|..+..
T Consensus 178 ~v~~~l~~~~~DvIIvlsH~G~~~ 201 (282)
T cd07407 178 WFQDAINNEDVDLILVLGHMPVRD 201 (282)
T ss_pred HHHHHHHhcCCCEEEEEeCCCCCC
Confidence 655544423345689999998764
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00048 Score=63.26 Aligned_cols=81 Identities=27% Similarity=0.412 Sum_probs=43.9
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCC-CEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKP-DVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~P-D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
..+-++||+|++...-....|-+ ..+++ |..+-..|.. ..+| |.+-++||++.+. +++ ..+.
T Consensus 4 ~mmyfisDtHfgh~nvi~~~pfs---n~~eh--d~vil~N~nn---tv~p~D~lwhLGDl~~~~---n~~---~~a~--- 66 (186)
T COG4186 4 TMMYFISDTHFGHKNVISMRPFS---NPDEH--DEVILSNWNN---TVGPDDVLWHLGDLSSGA---NRE---RAAG--- 66 (186)
T ss_pred eEEEEecccccCCcceeecCCCC---CHHHH--hHHHHHhHHh---cCCccceEEEeccccccc---chh---hHHH---
Confidence 45789999999876433222211 11221 2223333433 2333 7889999999765 322 1222
Q ss_pred HHhccccCCCCCCceEEEccCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.|++ .++-....|+||||-
T Consensus 67 ~Ile------rLnGrkhlv~GNhDk 85 (186)
T COG4186 67 LILE------RLNGRKHLVPGNHDK 85 (186)
T ss_pred HHHH------HcCCcEEEeeCCCCC
Confidence 2332 223345999999993
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.75 E-value=2.2e-06 Score=90.20 Aligned_cols=112 Identities=14% Similarity=0.229 Sum_probs=92.9
Q ss_pred cccCCCccceeeccccccceeecccccCCCcccccCCCCcccccCceeccccccCCccccceeeccc--------CCCCC
Q 010015 403 EKTEDENCEYEMVWDAEGSMHLVRKATNTPITRAKDTSGTMERGNAVMRHTAKKGNAQEVEISMNVD--------DPMTN 474 (520)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 474 (520)
|+.|..+.|+++.||+|++++|+|+..+...... +.++-.+.++++. ..+.+.+.+=.....+.| +++.+
T Consensus 258 ~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~k~~~~~-~g~~~~tv~~~s~~~~~~~~~i~~~~~~~~~ 335 (410)
T KOG3662|consen 258 ELNENIEREFDLSGDDEDHCSLLKLNYKLVVGGH-DHKEYNDKHASMS-SGALEYTVLLLSLRFGQDFNMIFGGIFPDIK 335 (410)
T ss_pred HHhhhhhhhcccccccccceEEeecccccccCCc-Ccccccccccccc-ccccccchhhhhhhccccHHHHhhccccceE
Confidence 4556789999999999999999998877777777 8899999999998 888888777766665555 22222
Q ss_pred CCCCCCCchhHHHHHHHHH-HhheeeEeEEechhHHHHHhhccccc
Q 010015 475 LPPRTSKSTAKFIIHRLVR-MFRMLTVIAVVNIPLYMMLLFKDWID 519 (520)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (520)
-.++++++.++||.+| .++++.++|++++|.|+|+.+|||+.
T Consensus 336 ---~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~~ 378 (410)
T KOG3662|consen 336 ---LVSSPRTELVTRRYIWKAISQIIFAAALTFTIFFKLITKDYMG 378 (410)
T ss_pred ---EEEecCCCceEEEeeHHHHHHHHHHHHHhhhHHHhhhhhhhhc
Confidence 3455778899999999 89999999999999999999999975
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0017 Score=72.32 Aligned_cols=20 Identities=15% Similarity=0.393 Sum_probs=15.3
Q ss_pred HHHHHhC---CcEEEECCccCCC
Q 010015 275 RLLDLIK---PVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l~---p~lVfsGH~H~~c 294 (520)
.|.+.+. .++|+.||+|...
T Consensus 236 ~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 236 EMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred HHHHhCCccCceEEEeCCCCccc
Confidence 4666664 5899999999753
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.68 E-value=7.6e-05 Score=74.10 Aligned_cols=71 Identities=24% Similarity=0.267 Sum_probs=43.3
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCC-CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPF-KPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~-~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
+|+++|||+|-. +. . +.+.+..+.... ..|.++++||++|.|+.. . +.++++.
T Consensus 1 m~~~~IsDIHG~----~~--------~---------l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s-~----~v~~~l~ 54 (235)
T PHA02239 1 MAIYVVPDIHGE----YQ--------K---------LLTIMDKINNERKPEETIVFLGDYVDRGKRS-K----DVVNYIF 54 (235)
T ss_pred CeEEEEECCCCC----HH--------H---------HHHHHHHHhhcCCCCCEEEEecCcCCCCCCh-H----HHHHHHH
Confidence 378999999931 10 1 233333332222 359999999999988532 2 2334444
Q ss_pred HHhccccCCCCCCceEEEccCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
+... ...+++.++||||.
T Consensus 55 ~~~~-------~~~~~~~l~GNHE~ 72 (235)
T PHA02239 55 DLMS-------NDDNVVTLLGNHDD 72 (235)
T ss_pred HHhh-------cCCCeEEEECCcHH
Confidence 4332 23478999999995
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0023 Score=65.18 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=14.5
Q ss_pred HHHHHhC-CcEEEECCccCCC
Q 010015 275 RLLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l~-p~lVfsGH~H~~c 294 (520)
+|.+.+. .++|++||+|...
T Consensus 199 ~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 199 EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHHcCCCCcEEEeCCcCccc
Confidence 3455553 4899999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0088 Score=61.11 Aligned_cols=21 Identities=19% Similarity=0.485 Sum_probs=15.0
Q ss_pred HHHHHhC--CcEEEECCccCCCc
Q 010015 275 RLLDLIK--PVLVLSGHDHDQCT 295 (520)
Q Consensus 275 ~LL~~l~--p~lVfsGH~H~~c~ 295 (520)
+++..+. .++|++||+|....
T Consensus 221 ~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 221 DIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred HHHhhcCCCCCEEEeCccCcccc
Confidence 3445443 49999999998754
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0086 Score=64.74 Aligned_cols=118 Identities=19% Similarity=0.166 Sum_probs=62.7
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNR 127 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~R 127 (520)
++.+||++-+|+|++=...-+-+.. +.+. .+...+ .+.+..+.|+|+..||||.+.+. +.+......+-
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~------DSf~---tFeEIl-~iA~e~~VDmiLlGGDLFHeNkP-Sr~~L~~~i~l 79 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGD------DSFV---TFEEIL-EIAQENDVDMILLGGDLFHENKP-SRKTLHRCLEL 79 (646)
T ss_pred ccceEEEEeecCccccccCCccccc------chHH---HHHHHH-HHHHhcCCcEEEecCcccccCCc-cHHHHHHHHHH
Confidence 4679999999999963222111100 1111 022222 23467789999999999987644 23322222333
Q ss_pred HHHHh-cc-ccC------------------------CCCCCceEEEccCCCCCCcccccCCCH---HHHHHHHHHhCCc
Q 010015 128 FKHIF-GL-KSQ------------------------DRFRDIRVHFLPGNHDNGYAALLSHKP---EIVRRYEKEFGKR 177 (520)
Q Consensus 128 f~~if-~~-~~~------------------------~~~~~iPv~~vpGNHDig~~~~~~~~~---~~~~rf~~~Fg~~ 177 (520)
+++.. .. |.+ -..-.+||+.|-||||..-+.. ..++ -...-+-++||..
T Consensus 80 LRryClgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDpSG~~-~lsalDIL~~~GLVNyFGk~ 157 (646)
T KOG2310|consen 80 LRRYCLGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDPSGDG-RLSALDILSAAGLVNYFGKV 157 (646)
T ss_pred HHHHccCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCCcccc-ccchHHHHHhcchhhhhccc
Confidence 33221 11 100 0135799999999999643321 1111 1122355688863
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.01 Score=71.78 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=17.2
Q ss_pred HHHHHHHhC-CcEEEECCccCCCc
Q 010015 273 SNRLLDLIK-PVLVLSGHDHDQCT 295 (520)
Q Consensus 273 s~~LL~~l~-p~lVfsGH~H~~c~ 295 (520)
...|.+.+. .++|+.||+|....
T Consensus 259 ~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 259 VYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred HHHHHHhCCCCcEEEeCCCccccc
Confidence 445666664 48999999999754
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.033 Score=64.37 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=14.8
Q ss_pred HHHHhC-CcEEEECCccCCCc
Q 010015 276 LLDLIK-PVLVLSGHDHDQCT 295 (520)
Q Consensus 276 LL~~l~-p~lVfsGH~H~~c~ 295 (520)
.++.+. .++|++||+|....
T Consensus 271 ~l~~v~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 271 YLTEVPGVDAVLMGHSHTEVK 291 (780)
T ss_pred HHhcCCCCCEEEECCCCCccc
Confidence 345553 58999999998754
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00065 Score=65.86 Aligned_cols=65 Identities=23% Similarity=0.269 Sum_probs=40.2
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
|+++|||+|= . + . .+.+.+..+....++|.++++||++|.|... .+ .++.+.
T Consensus 2 ri~~isDiHg--~--~-----------~------~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~--~~---~~~~l~-- 53 (207)
T cd07424 2 RDFVVGDIHG--H--Y-----------S------LLQKALDAVGFDPARDRLISVGDLIDRGPES--LA---CLELLL-- 53 (207)
T ss_pred CEEEEECCCC--C--H-----------H------HHHHHHHHcCCCCCCCEEEEeCCcccCCCCH--HH---HHHHHh--
Confidence 6899999992 1 1 0 1233443332234699999999999988431 11 222121
Q ss_pred hccccCCCCCCceEEEccCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDi 154 (520)
. .+++.|.||||.
T Consensus 54 --------~--~~~~~v~GNhe~ 66 (207)
T cd07424 54 --------E--PWFHAVRGNHEQ 66 (207)
T ss_pred --------c--CCEEEeECCChH
Confidence 1 258899999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00073 Score=68.69 Aligned_cols=67 Identities=24% Similarity=0.185 Sum_probs=41.6
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
++++|+|+|=. + + .+.+.+..+.-..++|.++++||++|.|+.. .+ .++.+.+
T Consensus 2 ~~~vIGDIHG~----~-----------~------~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s--~~---vl~~l~~- 54 (275)
T PRK00166 2 ATYAIGDIQGC----Y-----------D------ELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS--LE---VLRFVKS- 54 (275)
T ss_pred cEEEEEccCCC----H-----------H------HHHHHHHhcCCCCCCCEEEEeCCccCCCcCH--HH---HHHHHHh-
Confidence 68999999921 1 1 1233333332234789999999999998531 11 2222322
Q ss_pred hccccCCCCCCceEEEccCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.+.+++.|.||||.
T Consensus 55 ---------l~~~~~~VlGNHD~ 68 (275)
T PRK00166 55 ---------LGDSAVTVLGNHDL 68 (275)
T ss_pred ---------cCCCeEEEecChhH
Confidence 23468899999996
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.017 Score=64.51 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=25.8
Q ss_pred CCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 100 PDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 100 PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
.-+++..||.+++....+-..-... .+++. ..+ -=+.++||||+.++
T Consensus 50 n~l~ldaGD~~~gs~~~~~~~g~~~----i~~~N------~~g-~Da~~lGNHEFd~G 96 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFTLFGGRAD----AALMN------AAG-FDFFTLGNHEFDAG 96 (550)
T ss_pred CeEEEECCCCCCCccchhhcCCHHH----HHHHh------ccC-CCEEEeccccccCC
Confidence 4578899999987643211100111 12222 111 13678999998776
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.022 Score=58.09 Aligned_cols=20 Identities=20% Similarity=0.419 Sum_probs=15.1
Q ss_pred HHHHHh---CCcEEEECCccCCC
Q 010015 275 RLLDLI---KPVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l---~p~lVfsGH~H~~c 294 (520)
+|.+.+ +.++|+.||+|...
T Consensus 200 ~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 200 EMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred HHHHhcCCCCCCEEEeCCCCccc
Confidence 455555 35999999999865
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.019 Score=59.46 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=15.2
Q ss_pred HHHHHhC-CcEEEECCccCCC
Q 010015 275 RLLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l~-p~lVfsGH~H~~c 294 (520)
.|.+.+. .++|+.||+|..-
T Consensus 225 ~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 225 ALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred HHHhcCCCCCEEEeCCCCccC
Confidence 3556554 4999999999874
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0089 Score=66.07 Aligned_cols=163 Identities=15% Similarity=0.083 Sum_probs=77.9
Q ss_pred CCceEEEEEeCCCCCCC-CCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCH-HHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDK-TSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD-EEWQESL 125 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~-~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~-~e~~~~~ 125 (520)
...++|++.+|.|--=. +.+...... ...+.+. ...++......+..++|-.||++++..-.+. .....
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~-~~g~~~~------~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~-- 94 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDT-DGGLARI------ATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEP-- 94 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcc-cccHHHH------HHHHHHHHhhcCCeEEEeCCcccCCccccccccCCCh--
Confidence 35699999999995322 122111100 0000111 1111122233346789999999998532221 11111
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-------------------CcceEEEeCCE
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-------------------KRNYRFTVGKV 186 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-------------------~~ny~~~ig~~ 186 (520)
..+++.. .+ .=+...|||++.++. +.+.++.+... +++..++.++.
T Consensus 95 --~~~~mN~------m~-yDa~tiGNHEFd~g~------~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 95 --TVDLLNA------LG-YDAMTLGNHEFDYGL------EALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred --HHHHHhh------cC-CcEEeecccccccCH------HHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 2223221 11 126788999998763 23344433211 23445666765
Q ss_pred --EEEEEeCCCCCCCC--C---C-CC---CHHHHHHHHHhhccCCCCCeEEEEccCCCCC
Q 010015 187 --EFIVVDAQTLDGHP--E---G-NL---AAATWDFVKNVSIDFQLLPRVLLTHIPLYRR 235 (520)
Q Consensus 187 --~fV~LDS~~l~g~~--~---g-~i---~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~ 235 (520)
-+|++-+....... . + .+ -+..-+|++++..+. -.-+|+++|.+....
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~-vD~iI~LsH~G~~~d 218 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEG-VDVIIALSHLGIEDD 218 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcC-CCEEEEEeccCcCcc
Confidence 45666543222111 1 1 11 122234555544432 455899999998874
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0018 Score=63.49 Aligned_cols=65 Identities=20% Similarity=0.303 Sum_probs=40.5
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
|+.+|||+|=. + + .|.+.++.+....+.|.++++||++|.|+.. .+ .++.+.+
T Consensus 18 ri~vigDIHG~----~-----------~------~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s--~~---vl~~l~~- 70 (218)
T PRK11439 18 HIWLVGDIHGC----F-----------E------QLMRKLRHCRFDPWRDLLISVGDLIDRGPQS--LR---CLQLLEE- 70 (218)
T ss_pred eEEEEEcccCC----H-----------H------HHHHHHHhcCCCcccCEEEEcCcccCCCcCH--HH---HHHHHHc-
Confidence 89999999932 1 1 1334444432234679999999999999532 11 2222221
Q ss_pred hccccCCCCCCceEEEccCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDi 154 (520)
. .++.|.||||.
T Consensus 71 ---------~--~~~~v~GNHE~ 82 (218)
T PRK11439 71 ---------H--WVRAVRGNHEQ 82 (218)
T ss_pred ---------C--CceEeeCchHH
Confidence 1 35789999994
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.078 Score=53.38 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=61.1
Q ss_pred HHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHH
Q 010015 88 RRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIV 167 (520)
Q Consensus 88 ~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~ 167 (520)
.+.+.......++|++|.-||.+.+|...+++. ++.+. ..++-++.+ |||++..+.. ...+
T Consensus 18 ~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~----~~~L~----------~~G~D~iTl-GNH~fD~gel----~~~l 78 (255)
T cd07382 18 KEHLPKLKKEYKIDFVIANGENAAGGKGITPKI----AKELL----------SAGVDVITM-GNHTWDKKEI----LDFI 78 (255)
T ss_pred HHHHHHHHHHCCCCEEEECCccccCCCCCCHHH----HHHHH----------hcCCCEEEe-cccccCcchH----HHHH
Confidence 333444445668999999999998885555442 22122 234455555 9999866521 1111
Q ss_pred HHHHH----------HhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCC-HHHHHHHHHhhccCCCCCeEEEEcc
Q 010015 168 RRYEK----------EFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLA-AATWDFVKNVSIDFQLLPRVLLTHI 230 (520)
Q Consensus 168 ~rf~~----------~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~-~~ql~wL~~ll~~~~~~p~ILltH~ 230 (520)
+.... ..|..+..++.++.++-+++-........-.-. +..-+.++++.. ...-+|+++|.
T Consensus 79 ~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~--~~D~IIV~~H~ 150 (255)
T cd07382 79 DEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE--EADIIFVDFHA 150 (255)
T ss_pred hcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc--CCCEEEEEECC
Confidence 11100 112234556778887666654322222110001 111123333322 23468999998
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0039 Score=62.81 Aligned_cols=53 Identities=25% Similarity=0.243 Sum_probs=33.0
Q ss_pred HHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 88 RRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 88 ~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.+.+..+....+.|.++++||++|.|+.. .+ .++.+.+ .+..+..|.||||..
T Consensus 15 ~~LL~~i~~~~~~D~Li~lGDlVdRGp~s--~e---vl~~l~~----------l~~~v~~VlGNHD~~ 67 (257)
T cd07422 15 QRLLEKINFDPAKDRLWLVGDLVNRGPDS--LE---TLRFVKS----------LGDSAKTVLGNHDLH 67 (257)
T ss_pred HHHHHhcCCCCCCCEEEEecCcCCCCcCH--HH---HHHHHHh----------cCCCeEEEcCCchHH
Confidence 34444433334679999999999998531 11 2332322 223688999999963
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0032 Score=61.72 Aligned_cols=65 Identities=18% Similarity=0.255 Sum_probs=40.4
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
|+++|||+|=. + . .+.+.+..+....+.|.++++||++|.|+.. .+ .++.+.
T Consensus 16 ri~visDiHg~----~-----------~------~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--~~---~l~~l~-- 67 (218)
T PRK09968 16 HIWVVGDIHGE----Y-----------Q------LLQSRLHQLSFCPETDLLISVGDNIDRGPES--LN---VLRLLN-- 67 (218)
T ss_pred eEEEEEeccCC----H-----------H------HHHHHHHhcCCCCCCCEEEECCCCcCCCcCH--HH---HHHHHh--
Confidence 89999999931 1 1 1233443332245789999999999988532 22 222221
Q ss_pred hccccCCCCCCceEEEccCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDi 154 (520)
. ..++.|.||||.
T Consensus 68 --------~--~~~~~v~GNHE~ 80 (218)
T PRK09968 68 --------Q--PWFISVKGNHEA 80 (218)
T ss_pred --------h--CCcEEEECchHH
Confidence 1 136799999994
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.018 Score=56.21 Aligned_cols=128 Identities=19% Similarity=0.194 Sum_probs=68.9
Q ss_pred CCCCCCEEEEcCCcCCCCC-------------------CCCHHHHHHHHHHHHHHhccccC-CCCCCceEEEccCCCCCC
Q 010015 96 LPFKPDVILFLGDHFDGGP-------------------YLSDEEWQESLNRFKHIFGLKSQ-DRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~-------------------~~s~~e~~~~~~Rf~~if~~~~~-~~~~~iPv~~vpGNHDig 155 (520)
...+||++|++||.+.... ..+.++|.+ ++...+..+.- .....+|++.+.-+||++
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~---~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~ 102 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRE---RYRQYRSDPDLQRLLAQVPTIGIWDDHDIG 102 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHH---HHHHHcCCHHHHHHhhcCCEEEeccccccc
Confidence 5778999999999986542 123334433 33333221100 003568999999999997
Q ss_pred cccccC--------C----CHHHHHHHHHHhCC------------cceEEEeCCE-EEEEEeCCCCCCCCCCCCCHHHHH
Q 010015 156 YAALLS--------H----KPEIVRRYEKEFGK------------RNYRFTVGKV-EFIVVDAQTLDGHPEGNLAAATWD 210 (520)
Q Consensus 156 ~~~~~~--------~----~~~~~~rf~~~Fg~------------~ny~~~ig~~-~fV~LDS~~l~g~~~g~i~~~ql~ 210 (520)
.+.... . .....+.|..+.+. .++++.+|.. .|++||+...-..-. . ...+.+
T Consensus 103 ~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~Rd~W~-~-~~~er~ 180 (228)
T cd07389 103 DNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYRDSWD-G-YPAERE 180 (228)
T ss_pred cccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccccccc-c-cHHHHH
Confidence 543211 0 01123334433321 2456888987 999999975431111 1 222334
Q ss_pred HHHHhhccCCCCCeEEEE
Q 010015 211 FVKNVSIDFQLLPRVLLT 228 (520)
Q Consensus 211 wL~~ll~~~~~~p~ILlt 228 (520)
.|-+++.....+.+|+++
T Consensus 181 ~l~~~~~~~~~~~vv~lS 198 (228)
T cd07389 181 RLLDLLAKRKIKNVVFLS 198 (228)
T ss_pred HHHHHHHHhCCCCeEEEe
Confidence 444443344445555554
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=62.46 Aligned_cols=206 Identities=16% Similarity=0.127 Sum_probs=112.6
Q ss_pred CCCCCCEEEEcCCcCCCCCCC----------C--------HH--HHHHHHHHHHHHhc-cccCCCCCCceEEEccCCCCC
Q 010015 96 LPFKPDVILFLGDHFDGGPYL----------S--------DE--EWQESLNRFKHIFG-LKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~----------s--------~~--e~~~~~~Rf~~if~-~~~~~~~~~iPv~~vpGNHDi 154 (520)
...+||++|++||.+.+.... . .+ ..++|..|+..... .+.+.-....|+++..-.|++
T Consensus 165 a~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv 244 (522)
T COG3540 165 AKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEV 244 (522)
T ss_pred HhcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccc
Confidence 456799999999999643211 0 00 01222233322110 000001357899999999998
Q ss_pred CcccccCCCH---------------HHHHHHHHHhC----------CcceEEEeCCE-EEEEEeCCCCC------CCC--
Q 010015 155 GYAALLSHKP---------------EIVRRYEKEFG----------KRNYRFTVGKV-EFIVVDAQTLD------GHP-- 200 (520)
Q Consensus 155 g~~~~~~~~~---------------~~~~rf~~~Fg----------~~ny~~~ig~~-~fV~LDS~~l~------g~~-- 200 (520)
..+....... ...+.|.++.. ..+.+|.+|+. .|.+||+.++- +..
T Consensus 245 ~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~ 324 (522)
T COG3540 245 ANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPP 324 (522)
T ss_pred cccccccccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcc
Confidence 6543211111 12333443321 12457889986 78899987664 111
Q ss_pred ---------CCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHH
Q 010015 201 ---------EGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEE 271 (520)
Q Consensus 201 ---------~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e 271 (520)
..-+.++|.+||+.-+...+..+.||.+-+|+-...-+. ++..++..... ..-+|+. .
T Consensus 325 ~~q~~~~~~~~mlG~~QeqWLk~~L~~SkatWnVia~q~~~~~~~~d~-~~a~~~~~a~~-----D~wdGy~-------~ 391 (522)
T COG3540 325 NCQAVAGSAATMLGEQQEQWLKRGLGASKATWNVIAQQMPLGLVVFDG-SPATEGQEANA-----DGWDGYP-------A 391 (522)
T ss_pred hhhhhhCccccchhhHHHHHHHhhhhhcchhhhhhhhhcceeEeecCC-CccccCccccc-----cCcCCCc-------c
Confidence 123678899999998877778888999999987643211 11111111000 0012221 2
Q ss_pred HHHHHHHHhC-----CcEEEECCccCCCcEEeccC------CCCeEEEEeCcee
Q 010015 272 SSNRLLDLIK-----PVLVLSGHDHDQCTVSHESN------HEHIKEHTVGTIS 314 (520)
Q Consensus 272 ~s~~LL~~l~-----p~lVfsGH~H~~c~~~h~~~------~~~i~Eitv~S~S 314 (520)
.+++||..++ +.++|+|++|...-.....+ ....-|+.++|++
T Consensus 392 ~RerLl~fi~~~~~~N~V~LtgDvH~~wA~~l~~d~a~~~~~~~f~Efv~tsi~ 445 (522)
T COG3540 392 GRERLLRFIADRKIRNTVVLTGDVHYSWAHDLDPDFAQFEDFAPFWEFVSTSIN 445 (522)
T ss_pred cHHHHHHHHHhcCCCCcEEEechhHHHHHhhcCcchhcccccCceeeEeeccCc
Confidence 3567887774 37999999997543211111 1234577777765
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0049 Score=61.00 Aligned_cols=43 Identities=33% Similarity=0.499 Sum_probs=28.1
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCC
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
+.|.++++||++|.|+. ..+ .++.+.++.. +..++.|.||||.
T Consensus 37 ~~d~lv~lGDlIDrG~~--s~e---vl~~l~~l~~--------~~~~~~v~GNHE~ 79 (234)
T cd07423 37 EGRRAVFVGDLVDRGPD--SPE---VLRLVMSMVA--------AGAALCVPGNHDN 79 (234)
T ss_pred CCCEEEEECCccCCCCC--HHH---HHHHHHHHhh--------CCcEEEEECCcHH
Confidence 46999999999998853 222 2333333221 1247899999994
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0074 Score=61.67 Aligned_cols=48 Identities=29% Similarity=0.486 Sum_probs=28.6
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCc
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~ 156 (520)
..+.+||+||++|.|+. ..+ .++.+...-.. .....++++.||||..+
T Consensus 34 ~~~~iVfLGDyVDRGPd--S~e---Vld~L~~l~~~-----~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 34 ASALVIFLGDYCDRGPE--TRK---VIDFLISLPEK-----HPKQRHVFLCGNHDFAF 81 (304)
T ss_pred CCcEEEEeCCcCCCCCC--HHH---HHHHHHHhhhc-----ccccceEEEecCChHHH
Confidence 46789999999999953 222 22222221110 11225789999999543
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.094 Score=59.45 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=14.2
Q ss_pred HHHHhC-CcEEEECCccCCC
Q 010015 276 LLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 276 LL~~l~-p~lVfsGH~H~~c 294 (520)
.++.+. .++|++||+|...
T Consensus 222 ~l~~v~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 222 YLTKVPGIDAVLFGHSHAVF 241 (626)
T ss_pred HHhcCCCCCEEEcCCCCccC
Confidence 345553 4899999999864
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0035 Score=60.99 Aligned_cols=48 Identities=29% Similarity=0.326 Sum_probs=31.1
Q ss_pred CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
....+|.+|++||++|.|+.. . +.++.+..... . ..+++.+.||||..
T Consensus 21 ~~~~~d~li~lGD~vdrg~~~-~----~~l~~l~~~~~------~-~~~~~~l~GNHe~~ 68 (225)
T cd00144 21 GFPPNDKLIFLGDYVDRGPDS-V----EVIDLLLALKI------L-PDNVILLRGNHEDM 68 (225)
T ss_pred CCCCCCEEEEECCEeCCCCCc-H----HHHHHHHHhcC------C-CCcEEEEccCchhh
Confidence 335789999999999988532 1 12222222211 1 45799999999963
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.15 Score=57.97 Aligned_cols=18 Identities=22% Similarity=0.318 Sum_probs=13.6
Q ss_pred HHHhC-CcEEEECCccCCC
Q 010015 277 LDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 277 L~~l~-p~lVfsGH~H~~c 294 (520)
+..+. .++|+.||+|...
T Consensus 246 l~~v~gID~Il~GHsH~~~ 264 (649)
T PRK09420 246 LSEVPGIDAIMFGHSHAVF 264 (649)
T ss_pred HhcCCCCCEEEeCCCCccC
Confidence 45553 4999999999864
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.16 Score=58.98 Aligned_cols=15 Identities=33% Similarity=0.525 Sum_probs=12.1
Q ss_pred CEEEEcCCcCCCCCC
Q 010015 101 DVILFLGDHFDGGPY 115 (520)
Q Consensus 101 D~VI~lGDL~d~G~~ 115 (520)
-+++..||++++...
T Consensus 161 tLllD~GD~iQGSpl 175 (814)
T PRK11907 161 VVLVDNGDTIQGTPL 175 (814)
T ss_pred EEEEecCCCCCCCcc
Confidence 478899999988654
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0097 Score=58.53 Aligned_cols=43 Identities=30% Similarity=0.451 Sum_probs=29.0
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCC
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
..|.+||+||++|.|+.. . + .++.+.+.-. .-.++.|.||||.
T Consensus 33 ~~d~lvflGD~IDRGp~S-~-~---vl~~l~~l~~--------~~~~~~l~GNHE~ 75 (222)
T cd07413 33 PERQVVFLGDLIDRGPEI-R-E---LLEIVKSMVD--------AGHALAVMGNHEF 75 (222)
T ss_pred CCCEEEEeCcccCCCCCH-H-H---HHHHHHHhhc--------CCCEEEEEccCcH
Confidence 468999999999999642 2 2 3344444321 1258889999994
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0091 Score=59.93 Aligned_cols=208 Identities=17% Similarity=0.163 Sum_probs=107.5
Q ss_pred CCCEEEEcCCcCCCCCC--CCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH----
Q 010015 99 KPDVILFLGDHFDGGPY--LSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK---- 172 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~--~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~---- 172 (520)
.|=-++.-||++|+|.. ..+.| ..+++.|..-++...+-..-.+|||.-.||||..-... +..++-|++
T Consensus 126 ~plGlV~ggDitddgggq~~qprE-g~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gp----ph~~DWyRrElrd 200 (392)
T COG5555 126 CPLGLVEGGDITDDGGGQSFQPRE-GNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGP----PHSLDWYRRELRD 200 (392)
T ss_pred CceeEEeecceeccCCCcccCccc-cchhhchHhhhccCCCCceeeeeeEeccCchhhcccCC----CCchhHHHHHHHH
Confidence 35567888999987632 11111 11233343333322222235689999999999753321 111121211
Q ss_pred ----------HhCC-----------cceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhh--ccCCCCCeEEEEc
Q 010015 173 ----------EFGK-----------RNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVS--IDFQLLPRVLLTH 229 (520)
Q Consensus 173 ----------~Fg~-----------~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll--~~~~~~p~ILltH 229 (520)
.|-+ ..|+++.|+++++-.-.. .|+.. .-....+-|++.-+ ....++|++||.|
T Consensus 201 yve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf--~Gd~~-~ga~sslpwlk~dl~~~aadgrpv~Lfqh 277 (392)
T COG5555 201 YVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRF--IGDAE-PGANSSLPWLKVDLIYSAADGRPVYLFQH 277 (392)
T ss_pred HHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeee--ccccC-CCccccCcceeccceeeccCCCceeehhh
Confidence 1111 247889999988887653 23321 11233456777733 3445899999999
Q ss_pred cCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC---CcEEEECCccCCCcEEeccCCCCeE
Q 010015 230 IPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK---PVLVLSGHDHDQCTVSHESNHEHIK 306 (520)
Q Consensus 230 ~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~---p~lVfsGH~H~~c~~~h~~~~~~i~ 306 (520)
+---.-+...-+| .+..+| ..|..-..+.+......|+..++ ...+|.||-|+.--.. +
T Consensus 278 yGwdtfsteawdp--AsrT~D--------d~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may--------r 339 (392)
T COG5555 278 YGWDTFSTEAWDP--ASRTLD--------DTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY--------R 339 (392)
T ss_pred hCccceeccccCc--hhcccc--------cCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee--------e
Confidence 8433221111111 111112 12222233344455667777765 4789999999873221 1
Q ss_pred EEEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 307 EHTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 307 Eitv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
-+.++.+.-.... .-||.+..++++.
T Consensus 340 r~~ld~fkpkaa~-~Ggfav~rvt~~~ 365 (392)
T COG5555 340 RYDLDAFKPKAAV-RGGFAVGRVTNPW 365 (392)
T ss_pred ecCccccCccchh-hcceeEEEecCch
Confidence 2222333211111 3578888888875
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.37 Score=48.92 Aligned_cols=23 Identities=13% Similarity=0.296 Sum_probs=20.2
Q ss_pred cCHHHHHHHHHHhCCcEEEECCc
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHD 290 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~ 290 (520)
.++++..++++..+-++|+-||.
T Consensus 198 fg~~~~~~Fl~~n~l~~iiR~He 220 (271)
T smart00156 198 FGPDAVDEFLKKNNLKLIIRAHQ 220 (271)
T ss_pred cCHHHHHHHHHHCCCeEEEecCc
Confidence 36778899999999999999996
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.012 Score=58.69 Aligned_cols=43 Identities=26% Similarity=0.405 Sum_probs=28.2
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCC
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.-|.++++||++|.|+.. . + .++.+.+... ...++.|.||||.
T Consensus 36 ~~d~li~lGDliDRGp~S-~-~---vl~~~~~~~~--------~~~~~~l~GNHE~ 78 (245)
T PRK13625 36 DQRKLAFVGDLTDRGPHS-L-R---MIEIVWELVE--------KKAAYYVPGNHCN 78 (245)
T ss_pred CCCEEEEECcccCCCcCh-H-H---HHHHHHHHhh--------CCCEEEEeCccHH
Confidence 348999999999998532 2 2 2333333321 2368999999983
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.43 Score=49.36 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=29.6
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccC--CCcEEeccC-CCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHD--QCTVSHESN-HEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~--~c~~~h~~~-~~~i~Eitv~S~S 314 (520)
..++..+++++..+-++|+-||--. +....|... .+.-.-+||=|.+
T Consensus 220 fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~ 269 (305)
T cd07416 220 YSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 269 (305)
T ss_pred cCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCc
Confidence 4678889999999999999999743 333333210 0111567775554
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=59.86 Aligned_cols=52 Identities=25% Similarity=0.233 Sum_probs=31.8
Q ss_pred HHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCC
Q 010015 88 RRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 88 ~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.+.+..+.-....|.++++||++|.|+.. .+ .++.+.+ .+..+..|.||||.
T Consensus 17 ~~LL~~i~f~~~~D~l~~lGDlVdRGP~s--le---vL~~l~~----------l~~~~~~VlGNHD~ 68 (279)
T TIGR00668 17 QALLERVEFDPGQDTLWLTGDLVARGPGS--LE---VLRYVKS----------LGDAVRLVLGNHDL 68 (279)
T ss_pred HHHHHHhCcCCCCCEEEEeCCccCCCCCH--HH---HHHHHHh----------cCCCeEEEEChhHH
Confidence 44444433234679999999999999532 11 2232332 12236689999995
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.63 E-value=2.4 Score=45.10 Aligned_cols=23 Identities=13% Similarity=0.315 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHHhCCcEEEECCc
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHD 290 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~ 290 (520)
..++..+++|+..+-++|+=||-
T Consensus 271 FG~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 271 WGPDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred cCHHHHHHHHHHcCCcEEEECCC
Confidence 57788999999999999999998
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.68 Score=48.11 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=29.2
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccC--CCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHD--QCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~--~c~~~h~~~~~~i~Eitv~S~S 314 (520)
..++..+++++..+-++|+-||.-. +....| +-+-+||=|.|
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-----~~~~~TvfSa~ 274 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEH-----DGKCITVFSAP 274 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCcccceeEEEec-----CCeEEEEeCCc
Confidence 4678889999999999999999853 233333 22456665554
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.17 Score=52.53 Aligned_cols=174 Identities=20% Similarity=0.216 Sum_probs=92.4
Q ss_pred CCCCCCEEEEcCCcCCC--CC----CCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHH
Q 010015 96 LPFKPDVILFLGDHFDG--GP----YLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRR 169 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~--G~----~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~r 169 (520)
...+.|.++++||.-.- +. -.-++.|.. +..|-+.+. +....++|++.|-|||+-...-
T Consensus 27 ~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~-m~~F~~YYs---ge~~APVlTIFIGGNHEAsnyL----------- 91 (456)
T KOG2863|consen 27 GNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRR-MGDFYKYYS---GEIKAPVLTIFIGGNHEASNYL----------- 91 (456)
T ss_pred CCCCccEEEEccchHhhcchhhcccccCCHHHHH-HHHHHHHhC---CcccCceeEEEecCchHHHHHH-----------
Confidence 44689999999997531 11 112344443 333444443 2225678899999999942110
Q ss_pred HHHHhCC---cc-------eEEEeCCEEEEEEeCCCCC-----CCCC-C-----------CCCHHHHHHHHHhhccCCCC
Q 010015 170 YEKEFGK---RN-------YRFTVGKVEFIVVDAQTLD-----GHPE-G-----------NLAAATWDFVKNVSIDFQLL 222 (520)
Q Consensus 170 f~~~Fg~---~n-------y~~~ig~~~fV~LDS~~l~-----g~~~-g-----------~i~~~ql~wL~~ll~~~~~~ 222 (520)
.+-.+|. +| -+..+||+++-+|-...-. |... . ++..-...-|+++ +..
T Consensus 92 ~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkql----k~p 167 (456)
T KOG2863|consen 92 QELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQL----KHP 167 (456)
T ss_pred HhcccCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHHHHhh----cCc
Confidence 0111221 11 1467789998888654211 1110 1 1222222233332 223
Q ss_pred CeEEEEccCCCCC---CCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCC--CcEE
Q 010015 223 PRVLLTHIPLYRR---DETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ--CTVS 297 (520)
Q Consensus 223 p~ILltH~PL~~~---~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~--c~~~ 297 (520)
--|.|+|--+-.. .+ .-.-+|..|++.+.. ..+-|......+||+.++|...||.|.|-- ..+.
T Consensus 168 iDIfLSHDWP~GI~~yGd-~~~LLr~KPFFrqei----------e~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~ 236 (456)
T KOG2863|consen 168 IDIFLSHDWPRGIYYYGD-KKQLLRLKPFFRQEI----------EEGKLGSPALEELLEDLKPQYWFSAHLHVKFAALVQ 236 (456)
T ss_pred ceEEeecCCCcchhhcCC-HHHHHhcCcHHHHHH----------hcCCcCChHHHHHHHHhCcchhhhhhHhhHHhhhhc
Confidence 3589999644321 11 011134455543322 123465567888999999999999999954 3445
Q ss_pred ec
Q 010015 298 HE 299 (520)
Q Consensus 298 h~ 299 (520)
|.
T Consensus 237 H~ 238 (456)
T KOG2863|consen 237 HN 238 (456)
T ss_pred cc
Confidence 53
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.87 E-value=1.6 Score=44.68 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=21.2
Q ss_pred cCHHHHHHHHHHhCCcEEEECCcc
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDH 291 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H 291 (520)
.++++.+++++..+-++++=||--
T Consensus 212 fg~~~~~~Fl~~n~l~~iiR~He~ 235 (285)
T cd07415 212 FGQDVVEEFNHNNGLTLICRAHQL 235 (285)
T ss_pred cCHHHHHHHHHHCCCeEEEEcCcc
Confidence 567889999999999999999984
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=1.6 Score=44.92 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=29.1
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
..+++.+++++..+-++++=||--...-+... .+-+-+||=|.+
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~---~~~~~iTvfSa~ 265 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVMERGYGFF---ASRQLVTVFSAP 265 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccccCceEEc---CCCeEEEEeCCc
Confidence 46788999999999999999997443222221 123456665544
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.94 Score=46.58 Aligned_cols=44 Identities=9% Similarity=-0.006 Sum_probs=29.4
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
.+++..+++++..+-++++-||.-...-+... .+-+-+||=|.+
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~---~~~~~iTvfSa~ 263 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVVEDGYEFF---AKRQLVTLFSAP 263 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccccCeEEEe---CCCcEEEEecCC
Confidence 46788999999999999999998543333221 123456665544
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.096 Score=54.45 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=29.5
Q ss_pred cCHHHHHHHHHHhCCcEEEECCcc--CCCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDH--DQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H--~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
..++..+++++..+-++|+=||-- +++...| +-+-+||=|.|
T Consensus 251 FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-----~~~~iTvFSa~ 294 (321)
T cd07420 251 FGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-----NNKVITIFSAS 294 (321)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-----CCeEEEEecCC
Confidence 577888999999999999999974 3334333 22566665554
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.71 E-value=3.1 Score=43.33 Aligned_cols=42 Identities=12% Similarity=0.006 Sum_probs=28.9
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccC--CCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHD--QCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~--~c~~~h~~~~~~i~Eitv~S~S 314 (520)
..+++.+++++..+-++|+=||--- +....+ +-+-+||=|.|
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~-----~~~~iTvFSa~ 272 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVVEDGYEFFS-----KRQLVTLFSAP 272 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccccCceEEeC-----CCcEEEEeCCc
Confidence 5678899999999999999999743 233322 22456665554
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.1 Score=50.43 Aligned_cols=120 Identities=17% Similarity=0.304 Sum_probs=56.2
Q ss_pred EEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhC-CCCCCEEEEcCCcCCCCCCCC-------H-HHHHH
Q 010015 53 VAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASIL-PFKPDVILFLGDHFDGGPYLS-------D-EEWQE 123 (520)
Q Consensus 53 ilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~-~~~PD~VI~lGDL~d~G~~~s-------~-~e~~~ 123 (520)
|+++||+|+.+... .++ .|.+.+ .... ..+|+.+|++|++++...... . .....
T Consensus 1 Iv~~Sg~~~~~~~~----------~~~------~L~~~l-~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~ 63 (209)
T PF04042_consen 1 IVFASGPFLDSDNL----------SLE------PLRDLL-SGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEED 63 (209)
T ss_dssp EEEEES--CTTT-H----------HHH------HHHHHH-HCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHH
T ss_pred CEEEecCccCCCHh----------HHH------HHHHHH-HhccccCCCcEEEEeCCCcCccccccccccccccccccHH
Confidence 68999999973211 011 122222 2234 778999999999998632100 0 01112
Q ss_pred HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCH---HHHHHHHHH----hCCcceEEEeCCEEEEEEeC
Q 010015 124 SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKP---EIVRRYEKE----FGKRNYRFTVGKVEFIVVDA 193 (520)
Q Consensus 124 ~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~---~~~~rf~~~----Fg~~ny~~~ig~~~fV~LDS 193 (520)
...++.+.+..- ...+++..+||+||..........+ ....+..+. |-+.=+.+.+++..|++...
T Consensus 64 ~~~~~~~~~~~i----~~~~~vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 64 FLKELDSFLESI----LPSTQVVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp HHHHCHHHHCCC----HCCSEEEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SS
T ss_pred HHHHHHHHHhhc----ccccEEEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECC
Confidence 233344444422 2568999999999976542211111 001111111 11122567889988877654
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=93.23 E-value=4.4 Score=41.10 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=49.1
Q ss_pred HHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHH
Q 010015 90 AFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRR 169 (520)
Q Consensus 90 ~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~r 169 (520)
.+..+....++|++|.-||.+.+|...+++.+ +.+. ..++-++.+ |||.+...... ..++.
T Consensus 21 ~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~----~~L~----------~~GvDviT~-GNH~~Dkge~~----~~i~~ 81 (266)
T TIGR00282 21 NLPQLKSKYQADLVIANGENTTHGKGLTLKIY----EFLK----------QSGVNYITM-GNHTWFQKLIL----DVVIN 81 (266)
T ss_pred HHHHHHHhCCCCEEEEcCcccCCCCCCCHHHH----HHHH----------hcCCCEEEc-cchhccCcHHH----HHHhc
Confidence 33344456679999999999988755554422 2222 245667766 99998654210 11111
Q ss_pred HHHHh----------CCcceEEEeCCEEEEEEeCC
Q 010015 170 YEKEF----------GKRNYRFTVGKVEFIVVDAQ 194 (520)
Q Consensus 170 f~~~F----------g~~ny~~~ig~~~fV~LDS~ 194 (520)
..+.+ |.....+..++..+-+++-.
T Consensus 82 ~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~ 116 (266)
T TIGR00282 82 QKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQ 116 (266)
T ss_pred cccccccCCCCCCCCCCCcEEEEECCEEEEEEECC
Confidence 11111 22344567788777777654
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.65 E-value=0.75 Score=47.68 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=28.6
Q ss_pred cCHHHHHHHHHHhCCcEEEECCc--cCCCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHD--HDQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~--H~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
..+++.+++++..+-++++=||. .++....+ +-.-+||=|.+
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~-----~~~~iTvfSa~ 283 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHECVMDGFERFA-----QGKLITLFSAT 283 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEechhhhCCeEEeC-----CCeEEEEecCC
Confidence 46778899999999999999997 34333333 12456665544
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=89.82 E-value=0.89 Score=46.96 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=21.4
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHD 292 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~ 292 (520)
..+++.+++++..+-++|+=||--.
T Consensus 213 fg~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 213 FGAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred cCHHHHHHHHHHCCCcEEEEcChhh
Confidence 5678889999999999999999743
|
|
| >PTZ00235 DNA polymerase epsilon subunit B; Provisional | Back alignment and domain information |
|---|
Probab=87.89 E-value=1.6 Score=44.57 Aligned_cols=91 Identities=11% Similarity=0.121 Sum_probs=54.6
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhh----CCCCCCEEEEcCCcCCCCC---CCCHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI----LPFKPDVILFLGDHFDGGP---YLSDEE 120 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~----~~~~PD~VI~lGDL~d~G~---~~s~~e 120 (520)
+...+++++||.||.++.. +++ |++.|+... ....|-++|+.|+.+...- ......
T Consensus 25 ~~~~~~VilSDV~LD~p~t-----------l~~------L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~ 87 (291)
T PTZ00235 25 DKRHNWIIMHDVYLDSPYT-----------FEV------LDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKV 87 (291)
T ss_pred CCceEEEEEEeeccCCHHH-----------HHH------HHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHH
Confidence 4568999999999965332 222 344444321 2345999999999987531 112233
Q ss_pred HHHHHHHHHH-HhccccCCCCCCceEEEccCCCCCCc
Q 010015 121 WQESLNRFKH-IFGLKSQDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 121 ~~~~~~Rf~~-if~~~~~~~~~~iPv~~vpGNHDig~ 156 (520)
|.+..+++.. ++..-+.. ..+..+..|||-.|.+.
T Consensus 88 yk~~Fd~La~llls~fp~L-~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 88 YIKGFEKLSVMLISKFKLI-LEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHHHHHHHHHHHHhChHH-HhcCeEEEECCCCCCCc
Confidence 5556666665 23221111 24567899999999743
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.54 E-value=38 Score=33.24 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=18.8
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCce
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTI 313 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~ 313 (520)
+.++|+.||.|....+... .+....++.|.|
T Consensus 207 G~D~IiG~H~Hv~q~~E~~--~~~~I~YSlGNf 237 (239)
T cd07381 207 GADLVIGHHPHVLQGIEIY--KGKLIFYSLGNF 237 (239)
T ss_pred CCCEEEcCCCCcCCCeEEE--CCEEEEEcCCCc
Confidence 5699999999976554432 133444444443
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=82.83 E-value=40 Score=33.17 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=16.1
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEE
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVS 297 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~ 297 (520)
++++.+ -+.++|+.||.|......
T Consensus 198 A~~l~~-~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 198 AHALID-AGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHH-cCCCEEEcCCCCcCCceE
Confidence 344444 256999999999765443
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=80.95 E-value=7.3 Score=36.03 Aligned_cols=56 Identities=23% Similarity=0.284 Sum_probs=38.6
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCce----eecCCC-CCCcEEEEEEEcC
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTI----SWQQGN-LYPSFRLLSASNS 332 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~----S~~~g~-~~Pgf~llsl~~~ 332 (520)
-..|-..+..+..++||+|....+.|. +--.+.-||. ++..-+ ..|+|.|+.+..+
T Consensus 99 L~~LaRqldvDILl~G~Th~f~Aye~e----g~ffvnPGSaTGAfn~~~t~~~~PSFvLmDiqg~ 159 (183)
T KOG3325|consen 99 LALLARQLDVDILLTGHTHKFEAYEHE----GKFFVNPGSATGAFNVSDTDIIVPSFVLMDIQGS 159 (183)
T ss_pred HHHHHHhcCCcEEEeCCceeEEEEEeC----CcEEeCCCcccCCCcccccCCCCCceEEEEecCC
Confidence 344555677899999999999988884 4344554444 333222 4799999998776
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.31 E-value=6.7 Score=39.80 Aligned_cols=73 Identities=22% Similarity=0.283 Sum_probs=47.0
Q ss_pred CCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHH
Q 010015 46 GVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESL 125 (520)
Q Consensus 46 ~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~ 125 (520)
...+..|++-|+|+|-.... +.....=|+.+.+||.+.-| -.+| +
T Consensus 57 ~~~~~~r~VcisdtH~~~~~----------------------------i~~~p~gDvlihagdfT~~g---~~~e----v 101 (305)
T KOG3947|consen 57 VGPGYARFVCISDTHELTFD----------------------------INDIPDGDVLIHAGDFTNLG---LPEE----V 101 (305)
T ss_pred CCCCceEEEEecCcccccCc----------------------------cccCCCCceEEeccCCcccc---CHHH----H
Confidence 34567999999999953110 01244568999999999877 3333 3
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCccc
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAA 158 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~ 158 (520)
..|++-+.. ....--++|.|||+++|..
T Consensus 102 ~~fn~~~gs-----lph~yKIVIaGNHELtFd~ 129 (305)
T KOG3947|consen 102 IKFNEWLGS-----LPHEYKIVIAGNHELTFDH 129 (305)
T ss_pred HhhhHHhcc-----CcceeeEEEeeccceeecc
Confidence 336554331 1222247899999999874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 520 | |||
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 3e-12 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-11 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-06 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-05 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 5e-05 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 7e-05 |
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 3e-12
Identities = 34/228 (14%), Positives = 67/228 (29%), Gaps = 53/228 (23%)
Query: 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD-- 153
+PD I+F GD L+D+ + + + + ++ + ++ GNHD
Sbjct: 63 SGLRPDAIVFTGD-------LADKGEPAAYRKLRGL--VEPFAAQLGAELVWVMGNHDDR 113
Query: 154 -NGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFV 212
LL P + + + + IV+D ++ GH G + A+ ++
Sbjct: 114 AELRKFLLDEAPSM--------APLDRVCMIDGLRIIVLDT-SVPGHHHGEIRASQLGWL 164
Query: 213 KNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEES 272
+L H P P +
Sbjct: 165 AEELATPAPDGTILALHHPPI-----PSVLD--------------------MAVTVELRD 199
Query: 273 SNRLLDLIKP---VLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ 317
L +++ +L+GH H S + I + Q
Sbjct: 200 QAALGRVLRGTDVRAILAGHLH----YSTNATFVGIPVSVASATCYTQ 243
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-11
Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 48/225 (21%)
Query: 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG 155
L +PD ++ GD + + E + I + ++ +PGNHD+
Sbjct: 38 LRERPDAVVVSGD-------IVNCGRPEEYQVARQIL-----GSL-NYPLYLIPGNHDD- 83
Query: 156 YAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNV 215
A L + + + + + +D + G +G L T +++
Sbjct: 84 KALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFID-SSRAGTSKGWLTDETISWLEAQ 142
Query: 216 SIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNR 275
+ P + H P P G I +N +R
Sbjct: 143 LFEGGDKPATIFMHHPPL-----PLGN--------------AQMDPIACEN------GHR 177
Query: 276 LLDLIKP----VLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ 316
LL L++ + GH+H + + T+ Q
Sbjct: 178 LLALVERFPSLTRIFCGHNH----SLTMTQYRQALISTLPGTVHQ 218
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 2e-11
Identities = 57/303 (18%), Positives = 92/303 (30%), Gaps = 76/303 (25%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMR-----RAFFASILPFKPDVILFL 106
+ V D SL K+ VA AF A + K DV++
Sbjct: 41 SMVVTTDVHYFAP-SLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIIS 99
Query: 107 GDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHD-----------NG 155
GD + G S EE + L + + +V +PGNHD +
Sbjct: 100 GDLTNNGEKTSHEELAKKLTQVEK----------NGTQVFVVPGNHDINNPWARKFEKDK 149
Query: 156 YAALLSHKPEIVRRYEKEFGKRN-----------YRFTVGKVEFIVVD-------AQTLD 197
+ P + +FG + KV +++D Q +
Sbjct: 150 QLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN 209
Query: 198 GHPEGNLAAATWDFVKNVSIDFQL--LPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVR 255
EG L A T D++K S + + + H L H
Sbjct: 210 PTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLT--------DHNDV--------- 252
Query: 256 TGHSQEILYQNYITEESSNRLLDLIKP---VLVLSGHDHDQCTVSHES-NHEHIKEHTVG 311
Q T + +++D + LSGH H Q S +S + + I +
Sbjct: 253 --------IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTN 304
Query: 312 TIS 314
+S
Sbjct: 305 ALS 307
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 8e-07
Identities = 75/486 (15%), Positives = 141/486 (29%), Gaps = 163/486 (33%)
Query: 92 FASILP-FKPDVILFLGDHFDGG-------PYLSDEEWQESLNRFKHIFGLKSQDRFRDI 143
+ IL F+ F+ + FD LS EE HI K
Sbjct: 18 YKDILSVFEDA---FVDN-FDCKDVQDMPKSILSKEE-------IDHIIMSKD----AVS 62
Query: 144 RVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGN 203
L + LLS + E+V+++ +E + NY+F + + +T P
Sbjct: 63 GTLRL-------FWTLLSKQEEMVQKFVEEVLRINYKFLMSPI-------KTEQRQPSMM 108
Query: 204 LAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIV-RTGHSQEI 262
T + + +RD + + + + V R ++
Sbjct: 109 ------------------------TRMYIEQRDRL----YNDNQVFAKYNVSRLQPYLKL 140
Query: 263 LYQNYITEESSNRLLDLI------KPVLVLSG-HDHD-QC---------TVSHESNHEHI 305
+ + E + + + K + L + QC + + ++ E +
Sbjct: 141 --RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198
Query: 306 KEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLE---EAVLTRLCFLPMQTHIYIGYL 362
E L +++ S + SN++ ++ L L +++ Y L
Sbjct: 199 LE--------MLQKLL--YQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPYENCL 247
Query: 363 LLFIVTLVTLLFWPTGGVN-FGCHC-----------SDFL--AHGKQLFKVGTKEK-TED 407
L ++ V N F C +DFL A + T D
Sbjct: 248 L--VLLNV----QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Query: 408 ENCEYEMVWDAEGSMHLVRKATNTPIT----RAKDTS-------GTMERGNAVMRHTAKK 456
E L+ K + T+ R K
Sbjct: 302 E------------VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 457 GNAQEVE--ISMNVDDPMTNLPPRTSKSTAKFIIHRLVRMFRMLTVIAV-VNIPLYMMLL 513
N ++ I +++ L P + +MF L+V +IP ++ L
Sbjct: 350 VNCDKLTTIIESSLN----VLEPAEYR-----------KMFDRLSVFPPSAHIPTILLSL 394
Query: 514 FKDWID 519
W D
Sbjct: 395 I--WFD 398
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 3e-06
Identities = 48/311 (15%), Positives = 84/311 (27%), Gaps = 95/311 (30%)
Query: 21 LYGEMVAFWIPTLRSCTWPSSSSMDGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQ 80
+ E + + TW D + V I++ + L P E +
Sbjct: 332 IIAESIRDGL-----ATW---------DNWKHVNCDKLTTIIESSLNVLEPA----EYRK 373
Query: 81 FFTDLYMRRAFFASILPFKPDV--------ILFLGDHFDGGPYLSDEEWQESLNRFKHIF 132
F L S+ P P +++ + + +N+ H +
Sbjct: 374 MFDRL--------SVFP--PSAHIPTILLSLIWF--------DVIKSDVMVVVNKL-HKY 414
Query: 133 GLKSQDRFRD-IRVH---FLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEF 188
L + I + AL H+ IV Y +
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYAL--HR-SIVDHYNIPKTFDSDDLI------ 465
Query: 189 IVVDAQTLDG--------HPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPC 240
LD H + + V +DF+ L + + R D T
Sbjct: 466 ----PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI-------RHDSTAW 514
Query: 241 GPHRSSPIINQRIVRTGHSQEILYQNYITEESS--NRLLDLIK-------PVLVLSGH-D 290
S I+N Q Y+ YI + RL++ I L+ S + D
Sbjct: 515 NA--SGSILNTL------QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
Query: 291 HDQCTVSHESN 301
+ + E
Sbjct: 567 LLRIALMAEDE 577
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 49.2 bits (116), Expect = 2e-06
Identities = 45/287 (15%), Positives = 80/287 (27%), Gaps = 45/287 (15%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFD 111
+IAD Q D ++ L R + ++ LGD D
Sbjct: 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLL---RDAVLQWRRERVQCVVQLGDIID 63
Query: 112 GGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNG--------YAALLSHK 163
G + +L+ D + VH + GNH+ + L S +
Sbjct: 64 GHNR-RRDASDRALDTVMAEL-----DAC-SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ 116
Query: 164 PEIVRRYEKEFGKRNYRFTV---GKVEFIVVDAQTL------DGHPEGNLAAATWDFVKN 214
G Y + F+++DA L + + + +
Sbjct: 117 RTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNH 176
Query: 215 VSIDFQLLPRVLLTHIPLYRRDETPCGPHRS--------SPIINQRIVRTGH-------- 258
D L P + + + S +R++ H
Sbjct: 177 NLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAA 236
Query: 259 SQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHI 305
L N+ E + L + ++GHDHD + S +HI
Sbjct: 237 DPICLAWNH--EAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHI 281
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 2e-05
Identities = 45/262 (17%), Positives = 87/262 (33%), Gaps = 66/262 (25%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHF- 110
+ + D + H ++ +A ++ D IL LGD+F
Sbjct: 8 RFVAVGDWGGVPNAPFHTAR------------EMANAKAIATTVKTLGADFILSLGDNFY 55
Query: 111 -DGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRR 169
G D+ +QE+ F+ +F R++ H L GNHD + +S + +
Sbjct: 56 FTGVHDAKDKRFQET---FEDVFS---DPSLRNVPWHVLAGNHD--HLGNVSAQIAYSKI 107
Query: 170 YEK-EFGKRNYRFTV------GKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQL- 221
++ F YR V ++D TL G+ + ++ QL
Sbjct: 108 SKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLA 167
Query: 222 -----LPR------VLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITE 270
L ++ H P++ H + + ++++ +L + +T
Sbjct: 168 WIKKQLAAAKEDYVLVAGHYPVW-----SIAEHGPTHCLVKQLL------PLLTTHKVT- 215
Query: 271 ESSNRLLDLIKPVLVLSGHDHD 292
L GHDH+
Sbjct: 216 -------------AYLCGHDHN 224
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 5e-05
Identities = 22/199 (11%), Positives = 44/199 (22%), Gaps = 46/199 (23%)
Query: 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAA 158
D I +G+ ++ + ++PG D
Sbjct: 32 GADAIALIGNLMPKAA--KSRDYAAFFRILSEA----------HLPTAYVPGPQDAPIWE 79
Query: 159 LLSHKPEIVRRYEKEFGK-RNYRFTVGKVEFI-----VVDAQTLDGHPEGNLAAATWDFV 212
L + + + + F G + D + H A ++
Sbjct: 80 YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYR 139
Query: 213 KNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEES 272
+ + P++ L H Y S +
Sbjct: 140 LKALWELKDYPKIFLFHTMPY---HKGLNEQGSHEV------------------------ 172
Query: 273 SNRLLDLIKPVLVLSGHDH 291
L+ P+LVL
Sbjct: 173 -AHLIKTHNPLLVLVAGKG 190
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 7e-05
Identities = 28/237 (11%), Positives = 60/237 (25%), Gaps = 50/237 (21%)
Query: 81 FFTDLYMRRAFFASILPF----KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKS 136
+ R + +PD+++ +G+ + E R + +
Sbjct: 10 AIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 69
Query: 137 QDRFR--------------DIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-KRNYRF 181
+ + ++ +PG +D L E Y +
Sbjct: 70 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAG 129
Query: 182 TVGKVEFIVVDAQTLDGHPEG----NLAAATWDFVKNVSIDFQLLPRVLLTHIPLY--RR 235
G+ E I + E +++ + + V + + P
Sbjct: 130 WRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFV 189
Query: 236 DETPC-GPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDH 291
D TP H S ++N I + P + + GH
Sbjct: 190 DRTPEDPKHHGSAVVNTIIKS------------------------LNPEVAIVGHVG 222
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 520 | |||
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.91 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.84 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.83 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.78 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.74 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.7 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.68 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.56 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.55 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.46 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.45 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.41 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.39 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.36 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.24 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.23 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.2 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.17 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.17 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.16 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.16 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.15 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.14 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.07 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.99 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.96 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.37 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.22 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.17 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.02 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.84 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.83 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 97.75 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.72 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 97.6 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.44 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.14 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.97 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 96.93 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.86 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.82 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.49 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.45 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.25 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.21 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.2 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.06 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 96.01 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.68 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 95.47 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.43 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 90.39 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 89.0 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 87.41 |
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-24 Score=215.11 Aligned_cols=234 Identities=15% Similarity=0.146 Sum_probs=153.9
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhC-CCCCCEEEEcCCcCCCCCCCCHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASIL-PFKPDVILFLGDHFDGGPYLSDEEWQESL 125 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~-~~~PD~VI~lGDL~d~G~~~s~~e~~~~~ 125 (520)
+.+++||+++||+|+........... .+...+.+.+..+.. ..+||+||++||+++.+ ..++|....
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~~---------~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~---~~~~~~~~~ 89 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGAV---------DADDRLGELLEQLNQSGLRPDAIVFTGDLADKG---EPAAYRKLR 89 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTTB---------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTC---CHHHHHHHH
T ss_pred CCCCeEEEEEeCCccCCCCccccccc---------CHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC---CHHHHHHHH
Confidence 45689999999999975433211100 111234555544432 36899999999999988 455555433
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH---HhCCcceEEEeCCEEEEEEeCCCCCCCCCC
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK---EFGKRNYRFTVGKVEFIVVDAQTLDGHPEG 202 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~---~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g 202 (520)
+.+..+.. ..++|++.++||||.... ..+.+.. .+++.+|.+.+++++||++|+.. .+...+
T Consensus 90 ~~l~~l~~------~~~~pv~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~-~~~~~~ 154 (330)
T 3ib7_A 90 GLVEPFAA------QLGAELVWVMGNHDDRAE--------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSV-PGHHHG 154 (330)
T ss_dssp HHHHHHHH------HHTCEEEECCCTTSCHHH--------HHHHHHCCCCCCSCCCEEEEETTEEEEECCCCC-TTCCSB
T ss_pred HHHHHHHh------hcCCCEEEeCCCCCCHHH--------HHHHhcccccccCCcceEEEeCCEEEEEecCCC-CCCCCC
Confidence 33333322 246899999999996211 0111111 12345688999999999999964 455567
Q ss_pred CCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCC
Q 010015 203 NLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKP 282 (520)
Q Consensus 203 ~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p 282 (520)
.+..+|++||++.+......++|+++|||++.... . ..+ .......+....+++..+.
T Consensus 155 ~~~~~q~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~---~------~~~-------------~~~~~~~~~l~~~l~~~~v 212 (330)
T 3ib7_A 155 EIRASQLGWLAEELATPAPDGTILALHHPPIPSVL---D------MAV-------------TVELRDQAALGRVLRGTDV 212 (330)
T ss_dssp CCCHHHHHHHHHHTTSCCTTCEEEECSSCSSCCSS---G------GGG-------------GGSBSCHHHHHHHHTTSSE
T ss_pred ccCHHHHHHHHHHHHhcccCCeEEEEECCCCCCCc---c------ccc-------------cccccCHHHHHHHHhccCc
Confidence 88999999999988777777799999999986321 0 000 0111222333445555556
Q ss_pred cEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC-----------CCCCcEEEEEEEcCC
Q 010015 283 VLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG-----------NLYPSFRLLSASNSA 333 (520)
Q Consensus 283 ~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g-----------~~~Pgf~llsl~~~~ 333 (520)
+++|+||+|....... +++..++.||++.+.. ...|||+++++.+++
T Consensus 213 ~~v~~GH~H~~~~~~~----~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~ 270 (330)
T 3ib7_A 213 RAILAGHLHYSTNATF----VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 270 (330)
T ss_dssp EEEEECSSSSCEEEEE----TTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSC
T ss_pred eEEEECCCCCcccceE----CCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCC
Confidence 8999999999986665 6789999999884321 235799999998764
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-23 Score=202.06 Aligned_cols=235 Identities=14% Similarity=0.133 Sum_probs=154.1
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCC-CCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILP-FKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~-~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
+||+++||+|+.......... ......+.++++.+... .+||+||++||+++.+ ..++| +++.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~---------~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~---~~~~~----~~~~ 64 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGF---------IDVNAANADVVSQLNALRERPDAVVVSGDIVNCG---RPEEY----QVAR 64 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTT---------BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC---CHHHH----HHHH
T ss_pred CEEEEEecCCcCCCCcccccc---------cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC---CHHHH----HHHH
Confidence 589999999997432110000 00111345555554433 4799999999999987 44444 3466
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-Hh------CCcceEEEeCCEEEEEEeCCCCCCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-EF------GKRNYRFTVGKVEFIVVDAQTLDGHPEG 202 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-~F------g~~ny~~~ig~~~fV~LDS~~l~g~~~g 202 (520)
+.+. ..++|++.++||||.... ..+.|.. ++ +..+|++..++++|++||+.. .+...+
T Consensus 65 ~~l~------~l~~p~~~v~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~-~~~~~~ 129 (274)
T 3d03_A 65 QILG------SLNYPLYLIPGNHDDKAL--------FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSR-AGTSKG 129 (274)
T ss_dssp HHHT------TCSSCEEEECCTTSCHHH--------HHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCC-TTCSSB
T ss_pred HHHH------hcCCCEEEECCCCCCHHH--------HHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCC-CCCCCC
Confidence 6665 357899999999996321 1122322 12 344688899999999999964 444567
Q ss_pred CCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh-C
Q 010015 203 NLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI-K 281 (520)
Q Consensus 203 ~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l-~ 281 (520)
.+.++|++||++.+...++.++|+++|+|++.... . +.+. + .....+...++++.. +
T Consensus 130 ~~~~~~~~wl~~~l~~~~~~~~iv~~H~p~~~~~~---~------~~~~------------~-~~~~~~~l~~~l~~~~~ 187 (274)
T 3d03_A 130 WLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN---A------QMDP------------I-ACENGHRLLALVERFPS 187 (274)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSC---T------TTGG------------G-SBTTTHHHHHHHHHCTT
T ss_pred eeCHHHHHHHHHHHHhCCCCCEEEEECCCCcccCC---c------ccCc------------c-cCcCHHHHHHHHHhCCC
Confidence 78999999999977665678999999999986421 0 0000 0 011223345667766 5
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC-----------CCCCCcEEEEEEEcCCcccCCcccccEEEeEEe
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ-----------GNLYPSFRLLSASNSALLNMSNLEEAVLTRLCF 350 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~-----------g~~~Pgf~llsl~~~~~~~~~~~~~~~~t~~C~ 350 (520)
++++||||+|....... ++++.+..|+.+.+. +...|||+++++.++ .+.++...
T Consensus 188 v~~vl~GH~H~~~~~~~----~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~~----------~~~~~~~~ 253 (274)
T 3d03_A 188 LTRIFCGHNHSLTMTQY----RQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGE----------QWVSYQHS 253 (274)
T ss_dssp EEEEEECSSSSCEEEEE----TTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETT----------EEEEEEEE
T ss_pred ceEEEeCCCCCchhheE----CCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEeCC----------cEEEEEEe
Confidence 68999999999877654 467777777665322 234689999999876 34556666
Q ss_pred cc
Q 010015 351 LP 352 (520)
Q Consensus 351 LP 352 (520)
++
T Consensus 254 ~~ 255 (274)
T 3d03_A 254 LA 255 (274)
T ss_dssp CS
T ss_pred cC
Confidence 64
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=3e-22 Score=212.71 Aligned_cols=257 Identities=18% Similarity=0.196 Sum_probs=151.4
Q ss_pred cccCCCCCCC-----CCCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHh----------hHHHHHHHHHHhhCCCC
Q 010015 35 SCTWPSSSSM-----DGVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFF----------TDLYMRRAFFASILPFK 99 (520)
Q Consensus 35 ~C~W~~~~~~-----~~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~----------~d~~l~r~~~~~~~~~~ 99 (520)
.|+|+..... ...+.++||+++||+|+....... ... .+.+.. ....+.+.+..+ ...+
T Consensus 19 ~c~~~~~~~~~~~~~~~~~~~~~i~~iSD~H~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~ 92 (443)
T 2xmo_A 19 ACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTD-NGK----AFEKYVAAGDGKQLAYSDEITDAFLADV-ESKK 92 (443)
T ss_dssp --------------CBCSCCCEEEEEECCCCBCCGGGBC-CCH----HHHHHHHTSTTCCGGGHHHHHHHHHHHH-HHHT
T ss_pred hccCcccccccccccccCCCCeEEEEEeCCCCCCccccc-cch----hhhcccccccccccccHHHHHHHHHHHH-HHcC
Confidence 6777643211 123467999999999996432100 000 111100 112234444332 3457
Q ss_pred CCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccC--------CCHHHHHHHH
Q 010015 100 PDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLS--------HKPEIVRRYE 171 (520)
Q Consensus 100 PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~--------~~~~~~~rf~ 171 (520)
||+||++||+++++ ...+|....+.+..+. ..++|+++++||||........ ......+.|.
T Consensus 93 ~d~vi~~GDl~~~~---~~~~~~~~~~~l~~l~-------~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (443)
T 2xmo_A 93 TDVLIISGDLTNNG---EKTSHEELAKKLTQVE-------KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFS 162 (443)
T ss_dssp CSEEEEESCCBSSC---CHHHHHHHHHHHHHHH-------HTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHH
T ss_pred CCEEEECCCCCCCC---CHHHHHHHHHHHHHHH-------hCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHH
Confidence 99999999999988 4555554333333332 1368999999999975421100 0000135677
Q ss_pred HHhCC-------------cceE-EEeCCEEEEEEeCCCCC-------CCCCCCCCHHHHHHHHHhhccC--CCCCeEEEE
Q 010015 172 KEFGK-------------RNYR-FTVGKVEFIVVDAQTLD-------GHPEGNLAAATWDFVKNVSIDF--QLLPRVLLT 228 (520)
Q Consensus 172 ~~Fg~-------------~ny~-~~ig~~~fV~LDS~~l~-------g~~~g~i~~~ql~wL~~ll~~~--~~~p~ILlt 228 (520)
+.|+. ..|. +..++++||+||+.... ....+.+.++|++||++.+... .+.++|+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~ 242 (443)
T 2xmo_A 163 KIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVL 242 (443)
T ss_dssp HHTCCCCCTTCSEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhhhcChhhhhccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 77763 1232 34689999999997532 1234678999999999976543 357899999
Q ss_pred ccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEecc-CCCCeEE
Q 010015 229 HIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHES-NHEHIKE 307 (520)
Q Consensus 229 H~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~-~~~~i~E 307 (520)
|+|++..... ..+ ++ ..-..+...++++..+++++|+||+|......... .+.++.+
T Consensus 243 H~p~~~~~~~---~~~----------------~~---~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~ 300 (443)
T 2xmo_A 243 HHNLTDHNDV---IQK----------------GY---TINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITD 300 (443)
T ss_dssp SSBSSCSSCC-----C----------------CS---BCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEE
T ss_pred CCCCcccccc---ccc----------------cc---ccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEE
Confidence 9999864210 000 00 00122344567777788999999999987654422 2235788
Q ss_pred EEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 308 HTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 308 itv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
++.||++. .+|+|+++++.+++
T Consensus 301 i~~gs~~~----~p~~y~il~i~~~~ 322 (443)
T 2xmo_A 301 IVTNALSV----FPHKYGNITYSAKN 322 (443)
T ss_dssp EECCCTTS----TTCEEEEEEEETTT
T ss_pred EEcCcccc----CCCCeEEEEEeCCC
Confidence 88888663 35899999998875
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=199.48 Aligned_cols=236 Identities=17% Similarity=0.163 Sum_probs=146.2
Q ss_pred CCceEEEEEeCCCCCCCCCCC---CCC-chhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLH---LPP-KSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQE 123 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~---~~~-~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~ 123 (520)
+.++||+++||+|+....... +.+ ......+ ..+.+++..+. ..+||+||++||+++.+....... .+
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~~~~-~~~~d~vi~~GD~~~~~~~~~~~~-~~ 74 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSA------DLLRDAVLQWR-RERVQCVVQLGDIIDGHNRRRDAS-DR 74 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHH------HHHHHHHHHHH-HTTCSEEEECSCCBCTHHHHTTCH-HH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHH------HHHHHHHHHHH-hcCCCEEEECCCccCCCCCcchHH-HH
Confidence 357999999999997542110 000 0000000 12344444332 378999999999998762110000 12
Q ss_pred HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh------------------CCcceEEEe-C
Q 010015 124 SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF------------------GKRNYRFTV-G 184 (520)
Q Consensus 124 ~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F------------------g~~ny~~~i-g 184 (520)
.++++.+.+. ..++|+++++||||..... .+.|.+.| +..+|++.. +
T Consensus 75 ~~~~~~~~l~------~~~~p~~~v~GNHD~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 140 (322)
T 2nxf_A 75 ALDTVMAELD------ACSVDVHHVWGNHEFYNFS--------RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140 (322)
T ss_dssp HHHHHHHHHH------TTCSEEEECCCHHHHHHCC--------HHHHHTSTTCCCC------CEECGGGTCCCEEEEEET
T ss_pred HHHHHHHHHH------hcCCcEEEecCCCCcccCC--------HHHHhhhhCCcccccccccccccCCCCceEEEEecCC
Confidence 3344555555 3578999999999973110 12233322 446788997 9
Q ss_pred CEEEEEEeCCCCC--C---------------------------------------CCCCCCCHHHHHHHHHhhccCC--C
Q 010015 185 KVEFIVVDAQTLD--G---------------------------------------HPEGNLAAATWDFVKNVSIDFQ--L 221 (520)
Q Consensus 185 ~~~fV~LDS~~l~--g---------------------------------------~~~g~i~~~ql~wL~~ll~~~~--~ 221 (520)
+++||+||+..+. + ...+.+.++|++||++.+...+ +
T Consensus 141 ~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~ 220 (322)
T 2nxf_A 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 220 (322)
T ss_dssp TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcC
Confidence 9999999996531 1 0125577999999999765433 6
Q ss_pred CCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh-CCcEEEECCccCCCcEEecc
Q 010015 222 LPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI-KPVLVLSGHDHDQCTVSHES 300 (520)
Q Consensus 222 ~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l-~p~lVfsGH~H~~c~~~h~~ 300 (520)
.++||++|+|++.... . . .......+....+++.. +.+++||||+|.+.....
T Consensus 221 ~~~iv~~H~p~~~~~~---~---~------------------~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-- 274 (322)
T 2nxf_A 221 ERVLIFSHLPVHPCAA---D---P------------------ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-- 274 (322)
T ss_dssp CEEEEEESSCCCTTSS---C---G------------------GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC--
T ss_pred CcEEEEEccCCCCCCC---C---c------------------cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec--
Confidence 7899999999986421 0 0 00001223344556655 357899999999877651
Q ss_pred CCCCeEEEEeCceeecCCCCCCcEEEEEEEcCC
Q 010015 301 NHEHIKEHTVGTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 301 ~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
.++++.++.|++.-. ....+||.+++++++.
T Consensus 275 -~~g~~~i~~~~~~~~-~~~~~~y~~v~~~~~~ 305 (322)
T 2nxf_A 275 -SSGAQHITLEGVIET-PPHSHAFATAYLYEDR 305 (322)
T ss_dssp -TTSCEEEECCCGGGC-CTTSCEEEEEEECSSE
T ss_pred -cCCceEEEecchhhC-CCCCCcEEEEEEECCe
Confidence 267899999987422 2346899999998764
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-21 Score=193.08 Aligned_cols=233 Identities=21% Similarity=0.265 Sum_probs=142.0
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCC--CCCHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGP--YLSDEEWQESL 125 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~--~~s~~e~~~~~ 125 (520)
.+++||+++||+|+.....+. .. . ...+.+++...+...+||+||++||+++... ...+++|.
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~--~~----~------~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~--- 68 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFH--TA----R------EMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQ--- 68 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSS--CH----H------HHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHH---
T ss_pred CCceEEEEEcccCCCCCcccc--Cc----h------HHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHH---
Confidence 467999999999997543221 00 0 0112333433334468999999999975421 11222332
Q ss_pred HHHHHHhccccCCCCC-CceEEEccCCCCCCcccccCCCHHHHHHHHH---H--hCCcceEEEe------CCEEEEEEeC
Q 010015 126 NRFKHIFGLKSQDRFR-DIRVHFLPGNHDNGYAALLSHKPEIVRRYEK---E--FGKRNYRFTV------GKVEFIVVDA 193 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~-~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~---~--Fg~~ny~~~i------g~~~fV~LDS 193 (520)
+.|.+++... .. ++|+++++||||..... .....|.+ . +...+|++.+ ++++||+||+
T Consensus 69 ~~~~~~~~~~----~l~~~p~~~v~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds 138 (313)
T 1ute_A 69 ETFEDVFSDP----SLRNVPWHVLAGNHDHLGNV------SAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDT 138 (313)
T ss_dssp HHTTTTSCSG----GGTTCCEEECCCHHHHHSCH------HHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHcCch----hhcCCCEEEECCCCccCCCc------cccccccccCCCccCcccceEEEEecCCCCceEEEEEEEC
Confidence 2344444311 24 68999999999964321 10111211 1 2334677777 5999999998
Q ss_pred CCCCC------------CCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCcc
Q 010015 194 QTLDG------------HPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQE 261 (520)
Q Consensus 194 ~~l~g------------~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g 261 (520)
..+.+ ...+.+..+|++||++.+...+..++|+++|+|++.... .+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~--~~~------------------- 197 (313)
T 1ute_A 139 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAE--HGP------------------- 197 (313)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSS--SCC-------------------
T ss_pred hHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCC--CCC-------------------
Confidence 64322 113345789999999987766678899999999986421 000
Q ss_pred chhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC--------------------CCC
Q 010015 262 ILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG--------------------NLY 321 (520)
Q Consensus 262 ~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g--------------------~~~ 321 (520)
. +.+ .+....+++..+.+++||||+|.+..... .+++..++.||.+.... ...
T Consensus 198 --~-~~~-~~~l~~~l~~~~v~~~l~GH~H~~~~~~~---~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (313)
T 1ute_A 198 --T-HCL-VKQLLPLLTTHKVTAYLCGHDHNLQYLQD---ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270 (313)
T ss_dssp --C-HHH-HHHTHHHHHHTTCSEEEECSSSSEEEEEC---TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSC
T ss_pred --c-HHH-HHHHHHHHHHcCCcEEEECChhhhhhccC---CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCC
Confidence 0 000 12234566667789999999998655432 25788899888763111 112
Q ss_pred CcEEEEEEEcCC
Q 010015 322 PSFRLLSASNSA 333 (520)
Q Consensus 322 Pgf~llsl~~~~ 333 (520)
+||.++++.++.
T Consensus 271 ~gy~~l~v~~~~ 282 (313)
T 1ute_A 271 GGFAYVEITPKE 282 (313)
T ss_dssp CEEEEEEECSSC
T ss_pred CceEEEEEEcCE
Confidence 699999997653
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.7e-21 Score=195.62 Aligned_cols=225 Identities=18% Similarity=0.140 Sum_probs=140.9
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCC-CCHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY-LSDEEWQESLNR 127 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~-~s~~e~~~~~~R 127 (520)
..+||++++|.|.+.. . .+ ...+.+...+...+||+||++||+++.|.. ..++.|.+.
T Consensus 2 ~~l~f~~igD~g~g~~---------~----q~-----~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~--- 60 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTK---------G----QI-----LNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNL--- 60 (342)
T ss_dssp CCEEEEECCSCBSCCH---------H----HH-----HHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHH---
T ss_pred ceEEEEEEecCCCCCc---------h----HH-----HHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHH---
Confidence 3599999999997411 0 01 112233334456799999999999988742 234445442
Q ss_pred HHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-----------------------HhCC-cceEE--
Q 010015 128 FKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-----------------------EFGK-RNYRF-- 181 (520)
Q Consensus 128 f~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-----------------------~Fg~-~ny~~-- 181 (520)
|.+++..... ..++|+|.|+||||...+. .....|.+ ...| .+|++
T Consensus 61 f~~~~~~~~~--~~~~P~~~vlGNHD~~~~~------~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~ 132 (342)
T 3tgh_A 61 YEDVYSEEKG--DMYMPFFTVLGTRDWTGNY------NAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFT 132 (342)
T ss_dssp TTTTSCCGGG--TTCSEEEECCCHHHHTSCH------HHHHHHHHC---------------CCCSSCEEECSSSSEEEEE
T ss_pred HHHHhhhhhh--hhCCCEEEeCCCCccCCCc------hHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEE
Confidence 4444432100 3679999999999975432 11122221 1112 24543
Q ss_pred --Ee---------C----CEEEEEEeCCCCCCCCC-----CCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCC
Q 010015 182 --TV---------G----KVEFIVVDAQTLDGHPE-----GNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCG 241 (520)
Q Consensus 182 --~i---------g----~~~fV~LDS~~l~g~~~-----g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg 241 (520)
.+ | .++||+|||..+.+... +...++|++||++.++. ..++|+++|+|++....
T Consensus 133 ~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~--~~~~IV~~HhP~~~~~~---- 206 (342)
T 3tgh_A 133 HFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI--ADFIIVVGDQPIYSSGY---- 206 (342)
T ss_dssp EEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH--CSEEEEECSSCSSCSST----
T ss_pred EeeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc--CCcEEEEECCCCCCCCC----
Confidence 32 3 38999999986654321 12346899999997743 47899999999997421
Q ss_pred CCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC---
Q 010015 242 PHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG--- 318 (520)
Q Consensus 242 ~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g--- 318 (520)
.... .. + .+....||+..+.+++||||+|.+..... +++.++++|+.|...+
T Consensus 207 -~~~~------------------~~-l-~~~l~~ll~~~~VdlvlsGH~H~~~~~~~----~g~~~iv~Ga~g~~~~~~~ 261 (342)
T 3tgh_A 207 -SRGS------------------SY-L-AYYLLPLLKDAEVDLYISGHDNNMEVIED----NDMAHITCGSGSMSQGKSG 261 (342)
T ss_dssp -TCCC------------------HH-H-HHHTHHHHHHTTCCEEEECSSSSEEEEEE----TTEEEEEECCSSCCCCCCS
T ss_pred -CCCc------------------HH-H-HHHHHHHHHHcCCCEEEECCCcceeEEee----CCcEEEEeCccccccccCC
Confidence 0000 00 0 12235577778889999999999987665 4699999998773221
Q ss_pred ---------CCCCcEEEEEEEcCC
Q 010015 319 ---------NLYPSFRLLSASNSA 333 (520)
Q Consensus 319 ---------~~~Pgf~llsl~~~~ 333 (520)
...+||.++++..+.
T Consensus 262 ~~~~~s~f~~~~~Gf~~l~v~~~~ 285 (342)
T 3tgh_A 262 MKNSKSLFFSSDIGFCVHELSNNG 285 (342)
T ss_dssp SCCTTEEEEECSSEEEEEEEETTE
T ss_pred CCCCcceeecCCCcEEEEEEECCE
Confidence 134799999997664
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-18 Score=178.89 Aligned_cols=228 Identities=16% Similarity=0.142 Sum_probs=137.7
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhh-CCCCCCEEEEcCCcCCCCCCC--CHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI-LPFKPDVILFLGDHFDGGPYL--SDEEWQE 123 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~-~~~~PD~VI~lGDL~d~G~~~--s~~e~~~ 123 (520)
...++||++++|+|... .. .++++.+. ...+||+||++||+++.+... .+.+|.+
T Consensus 123 ~~~~~~f~~~gD~~~~~-------------~~---------~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~ 180 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTH-------------DS---------NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDT 180 (426)
T ss_dssp TTCCEEEEEECSCTTBH-------------HH---------HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHH
T ss_pred CCCCeEEEEEEeCCCCC-------------ch---------HHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHH
Confidence 35789999999999631 00 11222222 235899999999999753211 1344554
Q ss_pred HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC----------CcceEEEeCCEEEEEEeC
Q 010015 124 SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG----------KRNYRFTVGKVEFIVVDA 193 (520)
Q Consensus 124 ~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg----------~~ny~~~ig~~~fV~LDS 193 (520)
+. ++.+.+. ..+|+++++||||........ .......|.+.|. ..+|+|++|+++||+||+
T Consensus 181 ~~-~~l~~l~-------~~~P~~~v~GNHD~~~~~~~~-~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt 251 (426)
T 1xzw_A 181 WG-RFSERSV-------AYQPWIWTAGNHEIDYAPDIG-EYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSS 251 (426)
T ss_dssp HH-HHHHHHH-------TTSCEECCCCGGGCCCBGGGT-BCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCT
T ss_pred HH-HHHHHHH-------hcCCEEEeccccccccCCccc-cccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeC
Confidence 22 2222222 468999999999986532100 0001244666653 357899999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhhccC---CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCH
Q 010015 194 QTLDGHPEGNLAAATWDFVKNVSIDF---QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITE 270 (520)
Q Consensus 194 ~~l~g~~~g~i~~~ql~wL~~ll~~~---~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~ 270 (520)
....+ ...+|++||++.+... ....+||++|+|++......++ .+. . + .
T Consensus 252 ~~~~~-----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~------------------~~~---~-~-r 303 (426)
T 1xzw_A 252 YSGFV-----KYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYM------------------EGE---A-M-R 303 (426)
T ss_dssp TSCCS-----TTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTT------------------TTH---H-H-H
T ss_pred cccCC-----CCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccC------------------CCH---H-H-H
Confidence 63211 3578999999976653 2345999999999864211010 000 0 1 1
Q ss_pred HHHHHHHHHhCCcEEEECCccCCCcEEec---------------cCCCCeEEEEeCceeecCC------C----------
Q 010015 271 ESSNRLLDLIKPVLVLSGHDHDQCTVSHE---------------SNHEHIKEHTVGTISWQQG------N---------- 319 (520)
Q Consensus 271 e~s~~LL~~l~p~lVfsGH~H~~c~~~h~---------------~~~~~i~Eitv~S~S~~~g------~---------- 319 (520)
+....+++..+++++||||+|.+.....- ...+++..+++|+-+...+ .
T Consensus 304 ~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~ 383 (426)
T 1xzw_A 304 AIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFRE 383 (426)
T ss_dssp HHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEE
T ss_pred HHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 23345677778899999999998654310 0124677888876432111 0
Q ss_pred CCCcEEEEEEEcCC
Q 010015 320 LYPSFRLLSASNSA 333 (520)
Q Consensus 320 ~~Pgf~llsl~~~~ 333 (520)
...||..|++.++.
T Consensus 384 ~~~G~~~l~v~n~t 397 (426)
T 1xzw_A 384 ASFGHGIFDIKNRT 397 (426)
T ss_dssp CCCEEEEEEECSSS
T ss_pred cCCCeEEEEEEcCC
Confidence 13578788876654
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5e-17 Score=171.98 Aligned_cols=191 Identities=17% Similarity=0.192 Sum_probs=117.8
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCC-CCCCEEEEcCCcCCCCCCC--CHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILP-FKPDVILFLGDHFDGGPYL--SDEEWQE 123 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~-~~PD~VI~lGDL~d~G~~~--s~~e~~~ 123 (520)
...++||++++|+|.... . .+++..+... .+||+||++||+++.+... .+..|..
T Consensus 116 ~~~~~~f~~igD~~~~~~------------~----------~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFD------------S----------NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp TTCCEEEEEECSCTTBHH------------H----------HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred CCCCeEEEEEEeCCCCCC------------h----------HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 346899999999997410 0 0122233333 4899999999999864211 1334544
Q ss_pred HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC----------CcceEEEeCCEEEEEEeC
Q 010015 124 SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG----------KRNYRFTVGKVEFIVVDA 193 (520)
Q Consensus 124 ~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg----------~~ny~~~ig~~~fV~LDS 193 (520)
+. ++.+.+. ..+|+++++||||+........ ......|.+.|+ ..+|++++|+++||+||+
T Consensus 174 ~~-~~l~~~~-------~~~P~~~v~GNHD~~~~~~~~~-~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt 244 (424)
T 2qfp_A 174 WG-RFTERSV-------AYQPWIWTAGNHEIEFAPEINE-TEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSS 244 (424)
T ss_dssp HH-HHHHHHH-------TTSCEEECCCHHHHCCBGGGTB-CSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCT
T ss_pred HH-HHHHHHH-------hcCCeEeecCCcccccCCcccc-cccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecC
Confidence 32 2333232 3589999999999864311000 001234555553 347899999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhhccCC---CCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCH
Q 010015 194 QTLDGHPEGNLAAATWDFVKNVSIDFQ---LLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITE 270 (520)
Q Consensus 194 ~~l~g~~~g~i~~~ql~wL~~ll~~~~---~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~ 270 (520)
.... +. ..+|++||++.+.... ..++|+++|+|++......+. .+.. + .
T Consensus 245 ~~~~----~~-~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~------------------~~~~----~-r 296 (424)
T 2qfp_A 245 YSAY----GR-GTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFM------------------EGEA----M-R 296 (424)
T ss_dssp TSCC----ST-TSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTT------------------TTHH----H-H
T ss_pred CccC----CC-cHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCccccc------------------ccHH----H-H
Confidence 6321 22 2479999999766532 346899999999864211000 0000 1 1
Q ss_pred HHHHHHHHHhCCcEEEECCccCCCcE
Q 010015 271 ESSNRLLDLIKPVLVLSGHDHDQCTV 296 (520)
Q Consensus 271 e~s~~LL~~l~p~lVfsGH~H~~c~~ 296 (520)
+....+++..+++++||||+|.+...
T Consensus 297 ~~l~~ll~~~~VdlvlsGH~H~y~r~ 322 (424)
T 2qfp_A 297 TKFEAWFVKYKVDVVFAGHVHAYERS 322 (424)
T ss_dssp HHHHHHHHHTTCSEEEECSSSSEEEE
T ss_pred HHHHHHHHHhCCcEEEECChhhhhee
Confidence 23445777778899999999997554
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-16 Score=147.91 Aligned_cols=200 Identities=12% Similarity=0.096 Sum_probs=115.3
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf 128 (520)
.++|++++||+|+.. ..+ .+.+.. +...+||+||++||+++.+. ..+++.+ +
T Consensus 4 ~~mri~~iSD~H~~~------------~~~---------~~~~~~-~~~~~~D~vi~~GDl~~~~~--~~~~~~~----~ 55 (228)
T 1uf3_A 4 TVRYILATSNPMGDL------------EAL---------EKFVKL-APDTGADAIALIGNLMPKAA--KSRDYAA----F 55 (228)
T ss_dssp CCCEEEEEECCTTCH------------HHH---------HHHHTH-HHHHTCSEEEEESCSSCTTC--CHHHHHH----H
T ss_pred ceEEEEEEeeccCCH------------HHH---------HHHHHH-HhhcCCCEEEECCCCCCCCC--CHHHHHH----H
Confidence 358999999999741 011 222211 12237999999999998773 2333333 4
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHH-HHhCC-----cceEEEeC-CEEEEEEeCCCCCCCCC
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE-KEFGK-----RNYRFTVG-KVEFIVVDAQTLDGHPE 201 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~-~~Fg~-----~ny~~~ig-~~~fV~LDS~~l~g~~~ 201 (520)
.+.+. ..+.|+++|+||||.... ....+.|. ....+ .+..+.++ ++.|+++++... .+.
T Consensus 56 ~~~l~------~~~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~-~~~- 121 (228)
T 1uf3_A 56 FRILS------EAHLPTAYVPGPQDAPIW------EYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIA-DEG- 121 (228)
T ss_dssp HHHHG------GGCSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEE-SSS-
T ss_pred HHHHH------hcCCcEEEECCCCCchhH------HHHHhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcC-CCC-
Confidence 44443 246799999999996421 01111111 01111 12345666 899999986321 110
Q ss_pred CCCCHHH--------HHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHH
Q 010015 202 GNLAAAT--------WDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESS 273 (520)
Q Consensus 202 g~i~~~q--------l~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s 273 (520)
.+.+++ .+|+++.+.+..+.+.|+++|+|++..... + ...+..
T Consensus 122 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~~~~~~~-------------------------~---~~~~~~ 172 (228)
T 1uf3_A 122 -EPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLN-------------------------E---QGSHEV 172 (228)
T ss_dssp -CCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBTTTB-------------------------T---TSBHHH
T ss_pred -ccChhhcccchhhhHHHHHHHHHhCCCCCeEEEEccCcccCCcc-------------------------c---cCHHHH
Confidence 122222 233334333333568999999998753100 0 011234
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEE
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSAS 330 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~ 330 (520)
..+++..+++++++||+| ...... +++..+..||.+ .++|.++++.
T Consensus 173 ~~~~~~~~~~~~~~GH~H-~~~~~~----~~~~~in~Gs~~------~~~~~i~~~~ 218 (228)
T 1uf3_A 173 AHLIKTHNPLLVLVAGKG-QKHEML----GASWVVVPGDLS------EGEYSLLDLR 218 (228)
T ss_dssp HHHHHHHCCSEEEECCSS-CEEEEE----TTEEEEECCBGG------GTEEEEEETT
T ss_pred HHHHHHhCCCEEEEcccc-cCcccc----CCceEEEecccC------CCceEEEEec
Confidence 556777789999999999 332222 567778888865 4689888864
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.2e-16 Score=151.54 Aligned_cols=211 Identities=13% Similarity=0.108 Sum_probs=117.6
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCH----------
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSD---------- 118 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~---------- 118 (520)
.++|++++||+|+... .+ .+.++.+ ...+||+||++||+++.+....+
T Consensus 4 ~~mri~~iSDlH~~~~------------~~---------~~~l~~~-~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~ 61 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFD------------LL---------PKLKGVI-AEKQPDILVVVGNILKNEALEKEYERAHLARRE 61 (260)
T ss_dssp CCCEEEEEECCTTCGG------------GH---------HHHHHHH-HHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCC
T ss_pred ceEEEEEEeecCCChH------------HH---------HHHHHHH-HhcCCCEEEECCCCCCccCcchhhhhhhhhhcc
Confidence 3589999999998410 01 1222221 23479999999999997721000
Q ss_pred ---HHHH-------HHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-------CcceE-
Q 010015 119 ---EEWQ-------ESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-------KRNYR- 180 (520)
Q Consensus 119 ---~e~~-------~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-------~~ny~- 180 (520)
+++. +.+.++.+.+. ..++|+++|+||||..... ...++.+..+ ..+..
T Consensus 62 p~~~~~~~~~~~~~~~~~~~l~~l~------~~~~pv~~v~GNHD~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~ 128 (260)
T 2yvt_A 62 PNRKVIHENEHYIIETLDKFFREIG------ELGVKTFVVPGKNDAPLKI-------FLRAAYEAETAYPNIRVLHEGFA 128 (260)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH------TTCSEEEEECCTTSCCHHH-------HHHHHHHTTTTCTTEEECSSEEE
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHH------hcCCcEEEEcCCCCchhhh-------hHHHHhhhccCCcceEEecCcce
Confidence 0110 22333434443 2468999999999964210 0111211112 11234
Q ss_pred EEeCCEEEEEEeCCCCCCCCCCCCCHHHH---------HHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccch
Q 010015 181 FTVGKVEFIVVDAQTLDGHPEGNLAAATW---------DFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQ 251 (520)
Q Consensus 181 ~~ig~~~fV~LDS~~l~g~~~g~i~~~ql---------~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~ 251 (520)
+.++++.|++++.... .. .+.++++ +|| +.+....+.+.|+++|+|++... +. ..+.
T Consensus 129 ~~~~~~~i~g~~~~~~-~~---~~~~~~~~~~~~~~~~~~l-~~l~~~~~~~~Il~~H~pp~~~~---~d---~~~~--- 194 (260)
T 2yvt_A 129 GWRGEFEVIGFGGLLT-EH---EFEEDFVLKYPRWYVEYIL-KFVNELKPRRLVTIFYTPPIGEF---VD---RTPE--- 194 (260)
T ss_dssp EETTTEEEEEECSEEE-SS---CCBSSSSCEEEHHHHHHHG-GGGGGSCCCEEEEEESSCCSCSS---TT---CBTT---
T ss_pred EEECCEEEEecCCCcC-CC---CcCHHHHhhcchhhHHHHH-HHHHhcCCCCEEEEECCCccccc---cc---cCcc---
Confidence 7889999999986421 11 1122222 344 32333335678999999987531 10 0000
Q ss_pred hhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEc
Q 010015 252 RIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 252 ~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~ 331 (520)
. +. ....+...++++..++++++|||+| ...... +++..++.||.+. .+|.++++..
T Consensus 195 ---------~--~~-~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~----~~~~~in~Gs~~~------g~~~ii~~~~ 251 (260)
T 2yvt_A 195 ---------D--PK-HHGSAVVNTIIKSLNPEVAIVGHVG-KGHELV----GNTIVVNPGEFEE------GRYAFLDLTQ 251 (260)
T ss_dssp ---------B--SC-CCSCHHHHHHHHHHCCSEEEECSSC-CEEEEE----TTEEEEECCBGGG------TEEEEEETTT
T ss_pred ---------c--cc-ccCcHHHHHHHHHhCCCEEEECCcc-CCcEEe----CCEEEEeCCCCCC------CceEEEEEcC
Confidence 0 00 0112345567777899999999999 433322 5677788888652 2888888754
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-13 Score=136.03 Aligned_cols=198 Identities=15% Similarity=0.086 Sum_probs=113.3
Q ss_pred CCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHH
Q 010015 46 GVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESL 125 (520)
Q Consensus 46 ~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~ 125 (520)
+..+.+||++|||+|.... . + ...++|+||++|||++.| ..+++..
T Consensus 55 ~~~~~mri~~iSD~H~~~~---~------------------l--------~i~~~D~vi~aGDl~~~g---~~~e~~~-- 100 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTD---G------------------I--------QMPYGDILLHTGDFTELG---LPSEVKK-- 100 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCT---T------------------C--------CCCSCSEEEECSCCSSSC---CHHHHHH--
T ss_pred CCCCCeEEEEEeeCCCCcc---h------------------h--------ccCCCCEEEECCcccCCC---CHHHHHH--
Confidence 3456799999999996411 0 0 224799999999999988 4555544
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHH-------------------H---HHHhCC----cce
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRR-------------------Y---EKEFGK----RNY 179 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~r-------------------f---~~~Fg~----~ny 179 (520)
+.+.+.. ....++++|+||||..++.. ..+. + ...+.. ...
T Consensus 101 --~~~~L~~-----l~~~~v~~V~GNHD~~~d~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 167 (296)
T 3rl5_A 101 --FNDWLGN-----LPYEYKIVIAGNHELTFDKE------FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDS 167 (296)
T ss_dssp --HHHHHHT-----SCCSEEEECCCTTCGGGCHH------HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSE
T ss_pred --HHHHHHh-----CCCCeEEEEcCCcccccchh------hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCC
Confidence 4444431 12246999999999865421 1111 0 001111 123
Q ss_pred EEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCC
Q 010015 180 RFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHS 259 (520)
Q Consensus 180 ~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~ 259 (520)
..+++|++|++..-....+. .....++.+.+.+....-+....||++|.|++...+.. +
T Consensus 168 ~~~i~Gl~i~Gsp~tP~~~~--~~f~~~~~~~~~~~~~~ip~~~dILvTH~PP~g~~D~~-------~------------ 226 (296)
T 3rl5_A 168 EVTVKGFRIYGAPWTPWFNG--WGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWV-------P------------ 226 (296)
T ss_dssp EEEETTEEEEEECCBCC--C--CTTBCCTTHHHHHHHTTSCTTCSEEEESSCBTTSSCEE-------G------------
T ss_pred cEEECCEEEEEecCCCCCCC--cCCCcchHHHHHHHHhhCCCCCeEEEECCCcccccccc-------c------------
Confidence 56789999998553221121 11111111222221112245668999999998742210 0
Q ss_pred ccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeec
Q 010015 260 QEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ 316 (520)
Q Consensus 260 ~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~ 316 (520)
....++-+++..+.+.+..+|+++++||+|....... .+++..++.||++..
T Consensus 227 --~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~---~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 227 --KELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT---DGYTTYINASTCTVS 278 (296)
T ss_dssp --GGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE---CSSCEEEECBCSCTT
T ss_pred --cccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE---ECCEEEEECCcCCcC
Confidence 0011222333344444678899999999998765432 267889999998743
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.1e-13 Score=143.47 Aligned_cols=224 Identities=15% Similarity=0.117 Sum_probs=128.4
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCC-------------
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY------------- 115 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~------------- 115 (520)
.++||+++||.+.... .+ .++..+. ..+||+||++||++.....
T Consensus 115 ~~~rfa~~sc~~~~~g-~~---------------------~~~~~ia-~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~ 171 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHG-YY---------------------TAYKHMA-KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTH 171 (527)
T ss_dssp CCEEEEEECCCCGGGC-CC---------------------HHHHHHT-TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCC
T ss_pred CCeEEEEEecCCCCCC-cc---------------------HHHHHHH-hcCCCEEEecCCcccCCCCCcccccccccccC
Confidence 6899999999876311 01 1122222 3589999999999954311
Q ss_pred -----CCHHHHHHHHHHHHHHhccccC-CCCCCceEEEccCCCCCCcccccCC-----CH-HH----HHHHHHHh---C-
Q 010015 116 -----LSDEEWQESLNRFKHIFGLKSQ-DRFRDIRVHFLPGNHDNGYAALLSH-----KP-EI----VRRYEKEF---G- 175 (520)
Q Consensus 116 -----~s~~e~~~~~~Rf~~if~~~~~-~~~~~iPv~~vpGNHDig~~~~~~~-----~~-~~----~~rf~~~F---g- 175 (520)
.+.++|.. +|...+..+.- .....+|++.+.||||+..+..... .. .. ...|..+| .
T Consensus 172 ~~~e~~tl~~yr~---~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~ 248 (527)
T 2yeq_A 172 NSAEIITLQDYRN---RHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPL 248 (527)
T ss_dssp SSSSCCSHHHHHH---HHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCC
T ss_pred CcccccCHHHHHH---HHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCC
Confidence 12344443 33332211000 0013589999999999974321110 00 00 11233333 1
Q ss_pred -----------CcceEEEeCC-EEEEEEeCCCCCCCC-----------------CCCCCHHHHHHHHHhhccCCCCCeEE
Q 010015 176 -----------KRNYRFTVGK-VEFIVVDAQTLDGHP-----------------EGNLAAATWDFVKNVSIDFQLLPRVL 226 (520)
Q Consensus 176 -----------~~ny~~~ig~-~~fV~LDS~~l~g~~-----------------~g~i~~~ql~wL~~ll~~~~~~p~IL 226 (520)
..+|+|.+|+ ++|++||+..+-... ...+..+|++||++.+......++||
T Consensus 249 ~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv 328 (527)
T 2yeq_A 249 RISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVL 328 (527)
T ss_dssp CGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHCCSSEEEE
T ss_pred CcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcCCCCeEEE
Confidence 1367999999 999999997543211 12467999999999877666788999
Q ss_pred EEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh---CC--cEEEECCccCCCcEEeccC
Q 010015 227 LTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI---KP--VLVLSGHDHDQCTVSHESN 301 (520)
Q Consensus 227 ltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l---~p--~lVfsGH~H~~c~~~h~~~ 301 (520)
++|+|++..... .|+. ...+..-+ .| | ...+++|++.+ +. .+|||||+|.+........
T Consensus 329 ~s~~p~~~~~~~-~g~~---~~~~~D~W-----~g--~-----~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~ 392 (527)
T 2yeq_A 329 AQQIFFAKWNFG-TSAS---PIYSMDSW-----DG--Y-----PAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVD 392 (527)
T ss_dssp ECSSCCSCCCSS-CSSS---CCEETTSG-----GG--S-----HHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESS
T ss_pred EeCCcccccccC-CCcc---cccCccch-----hc--c-----HHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhcccc
Confidence 999999975321 1110 00000000 01 1 23356666665 33 6999999999876543211
Q ss_pred ----CCC--eEEEEeCcee
Q 010015 302 ----HEH--IKEHTVGTIS 314 (520)
Q Consensus 302 ----~~~--i~Eitv~S~S 314 (520)
..+ ..|+++++++
T Consensus 393 ~~~p~~~~~~~ef~~ssi~ 411 (527)
T 2yeq_A 393 FEKTSSKIFGAEFVGTSIT 411 (527)
T ss_dssp TTCTTSCEEEEEEECCCSS
T ss_pred ccCCCCCceEEEEEcCCee
Confidence 111 5788877765
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-12 Score=133.90 Aligned_cols=233 Identities=13% Similarity=0.001 Sum_probs=113.9
Q ss_pred CCceEEEEEeCCCCCCC--CCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCC-cCCCCCCCCHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDK--TSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGD-HFDGGPYLSDEEWQES 124 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~--~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGD-L~d~G~~~s~~e~~~~ 124 (520)
...+||+++||+||+.. ..+.+. +...... ..+.+.+.. +...+||+|+++|| ++|.+.. +.+.....
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~--~r~~~~~-----~~l~~lv~~-~~~~~~D~vliaGD~l~d~~~~-~~~~~~~~ 86 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPV--DRREELK-----KALDKVVEE-AEKREVDLILLTGDLLHSRNNP-SVVALHDL 86 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCE--ECHHHHH-----HHHHHHHHH-HHHHTCSEEEEESCSBSCSSCC-CHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCc--ChhHHHH-----HHHHHHHHH-HHHhCCCEEEECCccccCCCCC-CHHHHHHH
Confidence 46799999999999722 111111 1111111 123333332 34458999999999 9997743 22222222
Q ss_pred HHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceE-----------EEeCCEEEEEEeC
Q 010015 125 LNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYR-----------FTVGKVEFIVVDA 193 (520)
Q Consensus 125 ~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~-----------~~ig~~~fV~LDS 193 (520)
.+.+.++- .. +|++.++||||... . ....++.+..|+..+. +..+++.|++++.
T Consensus 87 ~~~l~~L~-------~~-~pv~~i~GNHD~~~-~------~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~ 151 (336)
T 2q8u_A 87 LDYLKRMM-------RT-APVVVLPGNHDWKG-L------KLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPY 151 (336)
T ss_dssp HHHHHHHH-------HH-SCEEECCC-------C------HHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECC
T ss_pred HHHHHHHH-------hc-CCEEEECCCCCccc-c------ccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCC
Confidence 22222221 12 79999999999643 1 1223343333421111 1125678888865
Q ss_pred CCCC--CCCCCCCCHHHHHHHHHhh-cc--CCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhcccc
Q 010015 194 QTLD--GHPEGNLAAATWDFVKNVS-ID--FQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYI 268 (520)
Q Consensus 194 ~~l~--g~~~g~i~~~ql~wL~~ll-~~--~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~l 268 (520)
..-. ....+....++++|+.+.+ .. .++.+.|+++|.|+..... ++..+. . +...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~--~~~~~~--~---------------~~~~v 212 (336)
T 2q8u_A 152 PDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--YAGIEQ--G---------------REIII 212 (336)
T ss_dssp C-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------------------------CCCEE
T ss_pred CCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCC--CCCccc--h---------------hhccc
Confidence 3210 0001122345666665533 22 4567899999999874311 110000 0 00011
Q ss_pred CHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee---ecCCCCCCcEEEEEEEcCC
Q 010015 269 TEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS---WQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 269 s~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S---~~~g~~~Pgf~llsl~~~~ 333 (520)
.. .+++ .+.+++++||+|....... +..-+..||.. +......+||.++++.+++
T Consensus 213 ~~----~l~~-~~~d~v~~GH~H~~~~~~~-----~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~~~ 270 (336)
T 2q8u_A 213 NR----ALIP-SVVDYAALGHIHSFREIQK-----QPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 270 (336)
T ss_dssp CG----GGSC-TTSSEEEEESCSSCEEEEE-----TTEEEECCCSSCCSGGGTTCCCEEEEEEEETTS
T ss_pred CH----HHcc-ccCCEEEEccccCceEeCC-----CccEEECCCCcCCCccccCCCCEEEEEEEeCCC
Confidence 11 1111 2458999999999865532 22344556643 2211236899999998653
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1e-12 Score=137.51 Aligned_cols=223 Identities=17% Similarity=0.142 Sum_probs=116.2
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
...++||+++||+|++... +. +..+.... ...+.+.+.. +...+||+||++||++|.+.. +.+.+....+
T Consensus 17 ~~~~mrilhiSD~Hlg~~~-~~-----~~~r~~~~--~~~l~~~v~~-~~~~~~D~VliaGDl~d~~~p-~~~~~~~~~~ 86 (386)
T 3av0_A 17 RGSHMMFVHIADNHLGYRQ-YN-----LDDREKDI--YDSFKLCIKK-ILEIKPDVVLHSGDLFNDLRP-PVKALRIAMQ 86 (386)
T ss_dssp -CCCCEEEEECCCCBTCCG-GG-----CHHHHHHH--HHHHHHHHHH-HHTTCCSEEEECSCSBSSSSC-CHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCCccc-cC-----cchhhHHH--HHHHHHHHHH-HHHcCCCEEEECCCCCCCCCC-CHHHHHHHHH
Confidence 3567999999999997431 10 10010000 1123444433 346789999999999998743 2333333223
Q ss_pred HHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHH-HHHHHHHHhCCcceEEEe---CCEEEEEEeCCCCCCCCCC
Q 010015 127 RFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPE-IVRRYEKEFGKRNYRFTV---GKVEFIVVDAQTLDGHPEG 202 (520)
Q Consensus 127 Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~-~~~rf~~~Fg~~ny~~~i---g~~~fV~LDS~~l~g~~~g 202 (520)
.+.++- ..++|+++|+||||....... ..+. .+..+...++.. .+.+ +++.+++++... .
T Consensus 87 ~l~~L~-------~~~~pv~~v~GNHD~~~~~~~-~~~~~~l~~~v~~l~~~--~v~~~~~~~v~i~gl~~~~------~ 150 (386)
T 3av0_A 87 AFKKLH-------ENNIKVYIVAGNHEMPRRLGE-ESPLALLKDYVKILDGK--DVINVNGEEIFICGTYYHK------K 150 (386)
T ss_dssp HHHHHH-------HTTCEEEECCCGGGSCSSTTS-CCGGGGGTTTCEECSEE--EEEEETTEEEEEEEECCCC------S
T ss_pred HHHHHH-------hcCCcEEEEcCCCCCCccccc-cCHHHHHHHHeEEcCCC--cEEEeCCCCEEEEeCCCCC------H
Confidence 233221 136899999999997542110 0110 000100112211 1222 457788887642 1
Q ss_pred CCCHHHHHHHHHhhc-cCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC
Q 010015 203 NLAAATWDFVKNVSI-DFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK 281 (520)
Q Consensus 203 ~i~~~ql~wL~~ll~-~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~ 281 (520)
....+..++|+.+.. ...+.+.|+++|.|+..... +. +. +... .+ -+
T Consensus 151 ~~~~~~~~~l~~l~~~~~~~~~~Ill~H~~~~~~~~---~~---------------------~~--~~~~---~l---~~ 198 (386)
T 3av0_A 151 SKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIP---LD---------------------YE--LEHF---DL---PK 198 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHTCSSEEEEECCCCTTTSS---SS---------------------CS--SCGG---GS---CC
T ss_pred HHHHHHHHHHHHhhhhcccCCCEEEEECcCccccCC---CC---------------------cc--cCHH---Hh---hh
Confidence 112333444544321 12357899999999854211 00 00 0000 01 12
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceee-cCCC------CCCcEEEEEEEc
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISW-QQGN------LYPSFRLLSASN 331 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~-~~g~------~~Pgf~llsl~~ 331 (520)
.++|++||+|....... ++...+..||... ..+. ..+||.++++.+
T Consensus 199 ~d~v~~GH~H~~~~~~~----~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 199 FSYYALGHIHKRILERF----NDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp CSEEEECSCCSCEEEEC----SSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCS
T ss_pred CCeEEccCCCCCccccC----CCceEEECCcccccCcchhccccCCCCEEEEEEEec
Confidence 58999999998732221 3456667788752 2221 257999999975
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=121.36 Aligned_cols=55 Identities=25% Similarity=0.299 Sum_probs=41.5
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC----CCCCCcEEEEEEEcC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ----GNLYPSFRLLSASNS 332 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~----g~~~Pgf~llsl~~~ 332 (520)
..+++..+.+++++||+|....... +++..++.||++... +...|+|.++++..+
T Consensus 110 ~~~~~~~~~d~vi~GHtH~~~~~~~----~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~ 168 (192)
T 1z2w_A 110 ALLQRQFDVDILISGHTHKFEAFEH----ENKFYINPGSATGAYNALETNIIPSFVLMDIQAS 168 (192)
T ss_dssp HHHHHHHSSSEEECCSSCCCEEEEE----TTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETT
T ss_pred HHHHHhcCCCEEEECCcCcCccEeE----CCEEEEECCcccccCCCCCcCCCCcEEEEEEECC
Confidence 3455556789999999999865544 678899999987532 234689999999765
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=4.6e-12 Score=121.95 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=42.0
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeec----CCCCCCcEEEEEEEcC
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ----QGNLYPSFRLLSASNS 332 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~----~g~~~Pgf~llsl~~~ 332 (520)
...+++..+.+++++||+|....... +++..++.||++.. .+...|+|.++++..+
T Consensus 133 l~~~~~~~~~d~vl~GHtH~~~~~~~----~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~~~ 192 (215)
T 2a22_A 133 LEQWQRRLDCDILVTGHTHKLRVFEK----NGKLFLNPGTATGAFSALTPDAPPSFMLMALQGN 192 (215)
T ss_dssp HHHHHHHHTCSEEEECSSCCCEEEEE----TTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETT
T ss_pred HHHHHhhcCCCEEEECCcCCCccEee----CCEEEEECCcccccCCCCCCCCCCcEEEEEEeCC
Confidence 34455556789999999999865443 67889999998743 2344689999999765
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=126.79 Aligned_cols=174 Identities=10% Similarity=0.078 Sum_probs=95.1
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcc
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRN 178 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~n 178 (520)
+||.|+++||+++.|. ...+ .++.+.++.. ..|+++|+||||....... ..++...
T Consensus 33 ~~d~ii~~GD~~~~g~--~~~~---~~~~l~~l~~--------~~~~~~v~GNhD~~~~~~~-----------~~~~~~~ 88 (252)
T 1nnw_A 33 EIEKYYILGNIVGLFP--YPKE---VIEVIKDLTK--------KENVKIIRGKYDQIIAMSD-----------PHATDPG 88 (252)
T ss_dssp CEEEEEEESCSSSSSS--CHHH---HHHHHHHHHH--------HSCEEEECCHHHHHHHHSC-----------TTCSSSG
T ss_pred CCCEEEEeCccCCCCC--CHHH---HHHHHHhhHh--------hcCeeEEecchHHHhhccc-----------cccCCcc
Confidence 7999999999999874 2333 2333443321 1479999999995321100 0000000
Q ss_pred e--EEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccC---CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhh
Q 010015 179 Y--RFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDF---QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRI 253 (520)
Q Consensus 179 y--~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~---~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~ 253 (520)
+ .++.+.. ..++. ....+.+++++++||+++.... .+...|+++|.|+..+... . .
T Consensus 89 ~~~~~~~~~~---~~~~~---~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~-------~-~----- 149 (252)
T 1nnw_A 89 YIDKLELPGH---VKKAL---KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDG-------E-V----- 149 (252)
T ss_dssp GGGGSSCCHH---HHHHH---HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTC-------C-C-----
T ss_pred cccchhhhHH---HHHHH---HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCccc-------c-c-----
Confidence 0 0000000 00000 0001235667889998854221 1345899999987542210 0 0
Q ss_pred hccCCCccchhccccCHHHHHHHHHHh-CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC-CCCCCcEEEEEEE
Q 010015 254 VRTGHSQEILYQNYITEESSNRLLDLI-KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ-GNLYPSFRLLSAS 330 (520)
Q Consensus 254 ~~~~~~~g~~yqn~ls~e~s~~LL~~l-~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~-g~~~Pgf~llsl~ 330 (520)
+.+ .+.+...++++.. +++++++||+|....... +++..++.||++... |...++|.++++.
T Consensus 150 ----------~~~-~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~----~~~~~in~Gs~~~~~~~~~~~~y~il~~~ 213 (252)
T 1nnw_A 150 ----------LAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT----RYGRVVCPGSVGFPPGKEHKATFALVDVD 213 (252)
T ss_dssp ----------CSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE----TTEEEEEECCSSSCSSSSCCEEEEEEETT
T ss_pred ----------CCC-CCHHHHHHHHhcCCCCCEEEECCccccceEec----CCeEEEECCCccCCCCCCCcceEEEEECC
Confidence 000 1123344566666 679999999999766554 578889999987543 2335688888764
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=3.9e-11 Score=117.53 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=107.7
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf 128 (520)
+.+|++++||+|-. + .. +.+.+..+ . +||.++++||+++.|. ...+ .++.+
T Consensus 2 ~~mri~~isDiHg~----~--------~~---------l~~~l~~~-~--~~d~ii~~GDl~~~g~--~~~~---~~~~l 52 (246)
T 3rqz_A 2 NAMRILIISDVHAN----L--------VA---------LEAVLSDA-G--RVDDIWSLGDIVGYGP--RPRE---CVELV 52 (246)
T ss_dssp CCCCEEEECCCTTC----H--------HH---------HHHHHHHH-C--SCSEEEECSCCSSSSS--CHHH---HHHHH
T ss_pred CCcEEEEEeecCCC----H--------HH---------HHHHHHhc-c--CCCEEEECCCcCCCCC--CHHH---HHHHH
Confidence 35899999999921 1 01 23333332 2 8999999999999884 2222 22333
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHH
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAAT 208 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~q 208 (520)
.+. . +++.|+||||.......... .+...... ........+..++
T Consensus 53 ~~~----------~-~~~~v~GNhD~~~~~~~~~~-----~~~~~~~~-------------------~~~~~~~~l~~~~ 97 (246)
T 3rqz_A 53 RVL----------A-PNISVIGNHDWACIGRLSLD-----EFNPVARF-------------------ASYWTTMQLQAEH 97 (246)
T ss_dssp HHH----------C-SSEECCCHHHHHHTCCCCCC-------CGGGGC-------------------HHHHHHHHCCHHH
T ss_pred Hhc----------C-CCEEEeCchHHHHhccCCcc-----ccCHHHHH-------------------HHHHHHHHcCHHH
Confidence 321 1 26899999995432110000 00000000 0000012367889
Q ss_pred HHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEEC
Q 010015 209 WDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSG 288 (520)
Q Consensus 209 l~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsG 288 (520)
++||+++..... ...++++|.++..+... | .++.+...++++..+++++|||
T Consensus 98 ~~~L~~lp~~~~-~~~i~~~Hg~p~~~~~~-------------------------~--~~~~~~~~~~l~~~~~~l~i~G 149 (246)
T 3rqz_A 98 LQYLESLPNRMI-DGDWTVVHGSPRHPIWE-------------------------Y--IYNARIAALNFPAFDTPLCFVG 149 (246)
T ss_dssp HHHHHHCCSEEE-ETTEEEESSCSSSTTTC-------------------------C--CCSHHHHHHHGGGCCSSEEECC
T ss_pred HHHHHhCCcEEE-ECCEEEEECCcCCcccc-------------------------c--cCChHHHHHHHhccCCCEEEEC
Confidence 999998643221 22689999876543110 0 1223445566777788999999
Q ss_pred CccCCCcEEec---------cC--------CCCeEEEEeCceeecC-CCCCCcEEEEEEE
Q 010015 289 HDHDQCTVSHE---------SN--------HEHIKEHTVGTISWQQ-GNLYPSFRLLSAS 330 (520)
Q Consensus 289 H~H~~c~~~h~---------~~--------~~~i~Eitv~S~S~~~-g~~~Pgf~llsl~ 330 (520)
|+|........ .. ..+...+++||++... |....+|.+++..
T Consensus 150 HtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg~p~A~Y~i~d~~ 209 (246)
T 3rqz_A 150 HTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPD 209 (246)
T ss_dssp SSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSSCCSEEEEEEEGG
T ss_pred CcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCCCCcCCcceEEEEECC
Confidence 99986544310 00 1247899999997543 4545689998853
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.23 E-value=7e-11 Score=123.39 Aligned_cols=231 Identities=13% Similarity=0.089 Sum_probs=111.2
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcC-CCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHF-DGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~-d~G~~~s~~e~~~~~~Rf~ 129 (520)
+||+++||+|++..........+...... ..+.+.. ..+...+||+||++||++ |.+. .+.+.+....+.+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~-----~~l~~l~-~~~~~~~~D~vliaGDl~hd~~~-~~~~~~~~~~~~l~ 73 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELK-----KALDKVV-EEAEKREVDLILLTGDLLHSRNN-PSVVALHDLLDYLK 73 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHH-----HHHHHHH-HHHHHHTCSEEEECSCCBSCSSS-CCHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHH-----HHHHHHH-HHHHhcCCCEEEECCCccccCCC-CCHHHHHHHHHHHH
Confidence 58999999999754111000011111111 1123322 223456899999999999 6543 23333333222233
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCCc--------ceEEE-e-C-CEEEEEEeCCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGKR--------NYRFT-V-G-KVEFIVVDAQTLDG 198 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~~--------ny~~~-i-g-~~~fV~LDS~~l~g 198 (520)
++ . .. +|+++|+||||.. + ......+...+... ...+. . | .+.|.++.-.. ..
T Consensus 74 ~l-~------~~-~~v~~i~GNHD~~-~------~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~-~~ 137 (379)
T 3tho_B 74 RM-M------RT-APVVVLPGNQDWK-G------LKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPD-ES 137 (379)
T ss_dssp HH-H------HH-SCEEECCCTTSCT-T------HHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCC-CC
T ss_pred HH-H------hC-CCEEEEcCCCccc-c------CccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCC-HH
Confidence 22 1 13 7999999999942 1 11222333222111 11121 1 2 35566664321 11
Q ss_pred CCCCCCCHHHHHHHHHhhc----c--CCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHH
Q 010015 199 HPEGNLAAATWDFVKNVSI----D--FQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEES 272 (520)
Q Consensus 199 ~~~g~i~~~ql~wL~~ll~----~--~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~ 272 (520)
........++.+|+.+.+. . .++.+.|+++|.|+..... .++..+.. ...+..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~-~~~se~~~------------------~~~v~~-- 196 (379)
T 3tho_B 138 EALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG-YAGIEQGR------------------EIIINR-- 196 (379)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------C------------------SCCBCG--
T ss_pred HHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc-CCCCcccc------------------ccccCH--
Confidence 1111233456677665332 1 3567889999999864211 01111100 000111
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCce---eecCCCCCCcEEEEEEEcCC
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTI---SWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~---S~~~g~~~Pgf~llsl~~~~ 333 (520)
.++ .-+.+++++||+|....+. +...-+-.||. ++.-....+||.++++.+++
T Consensus 197 --~~~-~~~~dyvalGH~H~~q~~~-----~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~~~ 252 (379)
T 3tho_B 197 --ALI-PSVVDYAALGHIHSFREIQ-----KQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 252 (379)
T ss_dssp --GGS-CTTSSEEEEESCSSCEEEE-----ETTEEEECCCSSCCSGGGSSSCCEEEEEECCSSS
T ss_pred --HHc-CcCCCEEEcccccCCeEeC-----CCCcEEecCCCCCCCcccccCCCEEEEEEEcCCC
Confidence 011 0135899999999984332 11233444554 22222235799999997764
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-09 Score=113.32 Aligned_cols=99 Identities=19% Similarity=0.111 Sum_probs=57.8
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
..+.+|++++||+||+.......+.. . +...+.+.+.. +...+||+|+++||++|.+.. +.+......+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~----d-----~~~~l~~ll~~-~~~~~~D~VliaGDlfd~~~~-~~~~~~~~~~ 97 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGN----D-----TFVTLDEILRL-AQENEVDFILLGGDLFHENKP-SRKTLHTCLE 97 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTT----H-----HHHHHHHHHHH-HHHTTCSEEEECSCCBSSSSC-CHHHHHHHHH
T ss_pred CCCCEEEEEEeccCCCCcccccchhh----h-----HHHHHHHHHHH-HhhcCCCEEEEcCccccCCCC-CHHHHHHHHH
Confidence 45679999999999975433211110 0 11123444433 345789999999999998743 3343444344
Q ss_pred HHHHHhcc--------cc------------------CCCCCCceEEEccCCCCCCc
Q 010015 127 RFKHIFGL--------KS------------------QDRFRDIRVHFLPGNHDNGY 156 (520)
Q Consensus 127 Rf~~if~~--------~~------------------~~~~~~iPv~~vpGNHDig~ 156 (520)
.+.++... -. .-...++|++.|+||||...
T Consensus 98 ~L~r~~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 98 LLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp HHHHHHBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred HHHHHhccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 44433100 00 00024799999999999653
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=109.70 Aligned_cols=41 Identities=12% Similarity=-0.022 Sum_probs=25.7
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCC-CeEEEEeCcee
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHE-HIKEHTVGTIS 314 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~-~i~Eitv~S~S 314 (520)
.++++..+++++++||+|...........+ +++.+.+++-.
T Consensus 132 ~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~~~ 173 (195)
T 1xm7_A 132 REIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANVEW 173 (195)
T ss_dssp HHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBGGG
T ss_pred HHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeEec
Confidence 345555567999999999987654421112 55667777744
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=107.72 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=37.3
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
+++++++||+|....... +++..++.||.+. .+...|+|.++++...
T Consensus 137 ~~d~vl~GHtH~~~~~~~----~~~~~iNpGs~~~-r~~~~~~y~il~~~~~ 183 (190)
T 1s3l_A 137 LYDVVIYGHTHERVFEEV----DDVLVINPGECCG-YLTGIPTIGILDTEKK 183 (190)
T ss_dssp CCSEEEEECSSCCEEEEE----TTEEEEECCCSSC-TTTSCCEEEEEETTTT
T ss_pred CCCEEEECCCCCcceEEE----CCEEEEECCcccc-cCCCCCEEEEEEcCCC
Confidence 789999999999876554 6788999999876 3344689999997543
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-09 Score=100.56 Aligned_cols=55 Identities=16% Similarity=0.064 Sum_probs=40.8
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC-CCCCCcEEEEEEEcC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ-GNLYPSFRLLSASNS 332 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~-g~~~Pgf~llsl~~~ 332 (520)
.++++..+.+++++||+|....... +++..++.||.+... +...|+|.++++.++
T Consensus 98 ~~~~~~~~~d~vi~GHtH~~~~~~~----~~~~~inpGs~~~~~~~~~~~~y~il~~~~~ 153 (176)
T 3ck2_A 98 DYWAQEEEAAICLYGHLHVPSAWLE----GKILFLNPGSISQPRGTIRECLYARVEIDDS 153 (176)
T ss_dssp HHHHHHTTCSEEECCSSCCEEEEEE----TTEEEEEECCSSSCCTTCCSCCEEEEEECSS
T ss_pred HHHHHhcCCCEEEECCcCCCCcEEE----CCEEEEECCCCCcCCCCCCCCeEEEEEEcCC
Confidence 4455667789999999998765443 578899999987433 332489999999754
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-09 Score=113.31 Aligned_cols=232 Identities=15% Similarity=0.133 Sum_probs=116.3
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
+.+.+||+++||+||+.....+.+.. .+...+.+.+..+ ...+||+||++|||+|.+.. +.+.....++
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~---------d~~~~l~~lv~~~-~~~~~D~VliaGDLfd~~~p-s~~a~~~~~~ 141 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGN---------DSFVSFNEILEIA-RERDVDMILLGGDIFHDNKP-SRKALYQALR 141 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTT---------HHHHHHHHHHHHH-HHTTCSEEEECSCSBSSSSC-CHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccch---------hHHHHHHHHHHHH-HhcCCCEEEEcCccccCCCC-CHHHHHHHHH
Confidence 45689999999999975433211111 0111244444433 44789999999999998754 3333333333
Q ss_pred HHHHH-----------hcccc---------C------CCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-----HhC
Q 010015 127 RFKHI-----------FGLKS---------Q------DRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-----EFG 175 (520)
Q Consensus 127 Rf~~i-----------f~~~~---------~------~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-----~Fg 175 (520)
.+++. +.... . -...++|+|.++||||....... .+ ..+.+.. .||
T Consensus 142 ~Lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~-~s--~~~LL~~~g~v~l~g 218 (472)
T 4fbk_A 142 SLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YS--ALDILQVTGLVNYFG 218 (472)
T ss_dssp HHHHHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--C-CC--HHHHHHHTTSCEECC
T ss_pred HHHHhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccccc-cc--HHHHhccCCcEEEeC
Confidence 34331 11000 0 00248999999999996432110 11 1222221 344
Q ss_pred Ccc---------eEEEeCCEEEEEEeCCCCCCCCCCCCCHHHH-HHHHH-hhc---c---CCCCCeEEEEccCCCCCCCC
Q 010015 176 KRN---------YRFTVGKVEFIVVDAQTLDGHPEGNLAAATW-DFVKN-VSI---D---FQLLPRVLLTHIPLYRRDET 238 (520)
Q Consensus 176 ~~n---------y~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql-~wL~~-ll~---~---~~~~p~ILltH~PL~~~~~~ 238 (520)
... ..+..|+..+ .| .|- +.+..+.+ ..+.+ ... . ..+...|++.|.........
T Consensus 219 ~~~~~d~i~~~pv~l~kg~~~v-al-----yGl--~y~~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~ 290 (472)
T 4fbk_A 219 RVPENDNIVVSPILLQKGFTKL-AL-----YGI--SNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT 290 (472)
T ss_dssp CCSCSSSEEECCEEEEETTEEE-EE-----EEC--CCCCHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTT
T ss_pred CcccCCceeEEEEEEEeCCceE-EE-----Eec--CCCchhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCcc
Confidence 321 0122232211 11 111 12333332 22222 111 1 12456899999987543110
Q ss_pred CCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee---e
Q 010015 239 PCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS---W 315 (520)
Q Consensus 239 ~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S---~ 315 (520)
+++..+ +++ -..++|+.||+|......-..+.+++..+..||.. .
T Consensus 291 ---------------------------~yipe~----ll~-~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~ 338 (472)
T 4fbk_A 291 ---------------------------SYLPES----FIQ-DFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSL 338 (472)
T ss_dssp ---------------------------SSCCGG----GSC-TTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSC
T ss_pred ---------------------------ccCChh----hhh-cCCCEEEecCcccceeeecccCCCCeEEEECCCcccccc
Confidence 111111 111 12489999999997654321223566777778753 2
Q ss_pred cCCC-CCCcEEEEEEEcC
Q 010015 316 QQGN-LYPSFRLLSASNS 332 (520)
Q Consensus 316 ~~g~-~~Pgf~llsl~~~ 332 (520)
..+. ..+||.++++...
T Consensus 339 ~e~E~~~kg~~lveI~~~ 356 (472)
T 4fbk_A 339 SPGETAPKHCGILNITGK 356 (472)
T ss_dssp CGGGCSCCEEEEEEEETT
T ss_pred CccCCCCCEEEEEEEECC
Confidence 2111 3689999999864
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.15 E-value=5.2e-09 Score=110.36 Aligned_cols=230 Identities=14% Similarity=0.101 Sum_probs=114.8
Q ss_pred CCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHH
Q 010015 47 VDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLN 126 (520)
Q Consensus 47 ~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~ 126 (520)
+.+.+|++++||+||+.......... .+...+.+.+.. +...+||+|+++|||+|.+.. +.+.....++
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~---------d~~~~l~~lv~~-~~~~~~D~VliaGDLfd~~~p-~~~~~~~~~~ 78 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGN---------DSFVSFNEILEI-ARERDVDMILLGGDIFHDNKP-SRKALYQALR 78 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTT---------HHHHHHHHHHHH-HHHTTCSEEEECSCCBSSSSC-CHHHHHHHHH
T ss_pred CCCCeEEEEEEcCCCCCcccccccch---------hHHHHHHHHHHH-HHhcCCCEEEEcCccccCCCC-CHHHHHHHHH
Confidence 45779999999999975433211110 011123444433 345789999999999998754 3333222233
Q ss_pred HHHHH-----------hcccc---------------CCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHH-----HhC
Q 010015 127 RFKHI-----------FGLKS---------------QDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEK-----EFG 175 (520)
Q Consensus 127 Rf~~i-----------f~~~~---------------~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~-----~Fg 175 (520)
.+++. +.... .-...++|+|.++||||...+... .+ ..+.+.. .||
T Consensus 79 ~lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~-~s--~~~lL~~~g~v~l~g 155 (417)
T 4fbw_A 79 SLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YS--ALDILQVTGLVNYFG 155 (417)
T ss_dssp HHHHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C-CC--HHHHHHHTTSCEECC
T ss_pred HHHHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc-cc--HHHHhccCCeEEEeC
Confidence 33331 11000 000248999999999996432110 11 1222221 344
Q ss_pred Ccce---------EEEeCC--EEEEEEeCCCCCCCCCCCCCHHHH-HHHHH-hh----c--cCCCCCeEEEEccCCCCCC
Q 010015 176 KRNY---------RFTVGK--VEFIVVDAQTLDGHPEGNLAAATW-DFVKN-VS----I--DFQLLPRVLLTHIPLYRRD 236 (520)
Q Consensus 176 ~~ny---------~~~ig~--~~fV~LDS~~l~g~~~g~i~~~ql-~wL~~-ll----~--~~~~~p~ILltH~PL~~~~ 236 (520)
.... .+..|+ +.+.++. .+..+.+ ..+.+ .. . ...+...|++.|.......
T Consensus 156 ~~~~~~~i~~~pv~l~~g~~~valyG~~----------~~~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~ 225 (417)
T 4fbw_A 156 RVPENDNIVVSPILLQKGFTKLALYGIS----------NVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHT 225 (417)
T ss_dssp CCC---CEEECCEEEEETTEEEEEEEEC----------CCCHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSS
T ss_pred CcccCCceeEEeEEEEecCceEEEEecc----------CCchhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCC
Confidence 3210 122222 2222222 2233332 22222 11 1 1235678999999775431
Q ss_pred CCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee-e
Q 010015 237 ETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS-W 315 (520)
Q Consensus 237 ~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S-~ 315 (520)
.. ++++.+ +++ ...++|+.||+|.........+.+++..+.-||.. .
T Consensus 226 ~~---------------------------~yip~~----l~~-~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~ 273 (417)
T 4fbw_A 226 PT---------------------------SYLPES----FIQ-DFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIAT 273 (417)
T ss_dssp SS---------------------------SSCCGG----GSC-TTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCS
T ss_pred Cc---------------------------ccCchh----Hhh-cCCCEEEecCccccceeccccCCCCEEEEECCCCCcC
Confidence 10 111111 111 12489999999997654321223567777778863 1
Q ss_pred cCC---CCCCcEEEEEEEcC
Q 010015 316 QQG---NLYPSFRLLSASNS 332 (520)
Q Consensus 316 ~~g---~~~Pgf~llsl~~~ 332 (520)
... ...+||.++++.++
T Consensus 274 s~~e~E~~~kg~~lvei~~~ 293 (417)
T 4fbw_A 274 SLSPGETAPKHCGILNITGK 293 (417)
T ss_dssp SCCHHHHSCCEEEEEEEETT
T ss_pred CCccccCCCCEEEEEEEECC
Confidence 211 13689999999865
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4.2e-10 Score=112.18 Aligned_cols=198 Identities=14% Similarity=0.065 Sum_probs=108.8
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNR 127 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~R 127 (520)
.++.|+++|||+|-. + .. +.+.+..+ ...++|.|+++||+++.|.. ..+ .++.
T Consensus 9 ~~~~~i~~iSDiHg~----~--------~~---------l~~vl~~~-~~~~~D~ii~~GDlv~~g~~--~~~---~~~~ 61 (270)
T 3qfm_A 9 MDMTKIALLSDIHGN----T--------TA---------LEAVLADA-RQLGVDEYWLLGDILMPGTG--RRR---ILDL 61 (270)
T ss_dssp --CEEEEEECCCTTC----H--------HH---------HHHHHHHH-HHTTCCEEEECSCCSSSSSC--SHH---HHHH
T ss_pred ccccEEEEEecCCCC----H--------HH---------HHHHHHHH-HhcCCCEEEEcCCCCCCCCC--HHH---HHHH
Confidence 367999999999931 1 01 23333332 33479999999999998853 222 2222
Q ss_pred HHHHhccccCCCCCCceEEEccCCCCCCcccc----cCCCHHHHHHHHHHhCCcceEEEeCCEEEEEEeCCCCCCCCCCC
Q 010015 128 FKHIFGLKSQDRFRDIRVHFLPGNHDNGYAAL----LSHKPEIVRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGN 203 (520)
Q Consensus 128 f~~if~~~~~~~~~~iPv~~vpGNHDig~~~~----~~~~~~~~~rf~~~Fg~~ny~~~ig~~~fV~LDS~~l~g~~~g~ 203 (520)
+++ . .|++.|+||||...... ...... ..++... .. ......
T Consensus 62 l~~----------~-~~~~~v~GNhD~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~---~~~~~~ 107 (270)
T 3qfm_A 62 LDQ----------L-PITARVLGNWEDSLWHGVRKELDSTRP-SQRYLLR-------------------QC---QYVLEE 107 (270)
T ss_dssp HHT----------S-CEEEECCCHHHHHHHHHHTTCSCTTSH-HHHHHHH-------------------HH---HHHHTT
T ss_pred HHc----------c-CCEEEEcCChHHHHHHhhccccCCCcH-HHHHHHH-------------------HH---HHHHHH
Confidence 321 2 27899999999532100 000000 0000000 00 000134
Q ss_pred CCHHHHHHHHHhhccC---CCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh
Q 010015 204 LAAATWDFVKNVSIDF---QLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI 280 (520)
Q Consensus 204 i~~~ql~wL~~ll~~~---~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l 280 (520)
+.+++++||+++.... -+...|+++|..+....+.. - +.. -..+....+++..
T Consensus 108 L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~-----~------------------~~~-~~~~~l~~~~~~~ 163 (270)
T 3qfm_A 108 ISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRE-----L------------------IHT-GKQEEFDRLVTHP 163 (270)
T ss_dssp SCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSST-----T------------------STT-CCHHHHHHTTTTT
T ss_pred cCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCce-----e------------------cCC-CcHHHHHHHhccc
Confidence 6788999999864321 13457889997654221000 0 000 0111222333334
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC-------CCCCcEEEEEEEcCC
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG-------NLYPSFRLLSASNSA 333 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g-------~~~Pgf~llsl~~~~ 333 (520)
+.+++|+||+|....... .++...++.||++...+ ...++|.++++..++
T Consensus 164 ~~d~~i~GHtH~~~~~~~---~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~ 220 (270)
T 3qfm_A 164 PCDIAVYGHIHQQLLRYG---TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKG 220 (270)
T ss_dssp TCSEEECCSSCSEEEEEC---TTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTE
T ss_pred CCCEEEECCcCchHheec---cCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCC
Confidence 568999999997654331 15788999999985532 235799999998753
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-09 Score=108.03 Aligned_cols=88 Identities=24% Similarity=0.277 Sum_probs=50.5
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+|++++||+|++... +.. + ...... ...+.+.+.. +...+||+|+++||++|.+.. +.+.+....+.+.+
T Consensus 1 mkilh~sD~Hlg~~~-~~~-~----~~~~~~--~~~~~~~~~~-~~~~~~D~vl~~GDl~d~~~~-~~~~~~~~~~~l~~ 70 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ-FHK-P----QREEEF--AEAFKNALEI-AVQENVDFILIAGDLFHSSRP-SPGTLKKAIALLQI 70 (333)
T ss_dssp CEEEEECCCCBTCCG-GGC-H----HHHHHH--HHHHHHHHHH-HHHTTCSEEEEESCSBSSSSC-CHHHHHHHHHHHHH
T ss_pred CEEEEEcccCCCCcc-cCC-c----hhhHHH--HHHHHHHHHH-HHhcCCCEEEECCCcCCCCCC-CHHHHHHHHHHHHH
Confidence 589999999997421 110 0 011111 1123333332 345689999999999997632 33333332222222
Q ss_pred HhccccCCCCCCceEEEccCCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
+ . ..++|++.++||||..
T Consensus 71 l-~------~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 71 P-K------EHSIPVFAIEGNHDRT 88 (333)
T ss_dssp H-H------TTTCCEEEECCTTTCC
T ss_pred H-H------HCCCcEEEeCCcCCCc
Confidence 2 1 2468999999999964
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=99.61 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=34.1
Q ss_pred hCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 280 IKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 280 l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
.+++++++||+|....... +++..++.||++. |+|.++++..+
T Consensus 127 ~~~d~vi~GHtH~~~~~~~----~~~~~iNpGS~~~------~sy~il~~~~~ 169 (178)
T 2kkn_A 127 EKPQVILFGHTHEPEDTVK----AGVRFLNPGSLAE------GSYAVLELDGG 169 (178)
T ss_dssp SCCSEEECCSCSSCCEEEE----TTEEEECCCCTTT------TEEEEEEEETT
T ss_pred cCCCEEEECccCCCCeEEe----CCEEEEECCCCCC------CeEEEEEECCC
Confidence 3568999999999875543 5788888888652 89999999765
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.96 E-value=5.9e-09 Score=99.72 Aligned_cols=43 Identities=21% Similarity=0.316 Sum_probs=32.8
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEE
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLS 328 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~lls 328 (520)
.+++++||+|....... +++..+..||++...+...|+|.+++
T Consensus 144 ~d~vi~GHtH~~~~~~~----~~~~~iNpGs~~~pr~~~~~sy~il~ 186 (208)
T 1su1_A 144 NDVLVYGHTHLPVAEQR----GEIFHFNPGSVSIPKGGNPASYGMLD 186 (208)
T ss_dssp TCEEECCSSCCCEEEEE----TTEEEEECCCSSCCCTTCCCEEEEEE
T ss_pred CCEEEECCcccCccEEe----CCEEEEECCCCcCCCCCCCCEEEEEE
Confidence 48999999998865543 57888999998744333358999988
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.37 E-value=2.8e-08 Score=95.37 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=43.1
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf 128 (520)
...++++|||+|- .+ . .+.+.++.+....++|.+|++||++|.|.. ..+ .
T Consensus 11 ~~~~i~visDiHg----~~-----------~------~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~--~~~-------~ 60 (221)
T 1g5b_A 11 KYRNIWVVGDLHG----CY-----------T------NLMNKLDTIGFDNKKDLLISVGDLVDRGAE--NVE-------C 60 (221)
T ss_dssp GCSCEEEECCCTT----CH-----------H------HHHHHHHHHTCCTTTCEEEECSCCSSSSSC--HHH-------H
T ss_pred CCceEEEEEcCCC----CH-----------H------HHHHHHHHccCCCCCCEEEEeCCccCCCCC--hHH-------H
Confidence 3478999999992 11 0 123444433333478999999999998842 211 1
Q ss_pred HHHhccccCCCCCCceEEEccCCCCC
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
.+.+. ..+++.|.||||.
T Consensus 61 ~~~l~--------~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 61 LELIT--------FPWFRAVRGNHEQ 78 (221)
T ss_dssp HGGGG--------STTEEECCCHHHH
T ss_pred HHHHh--------cCCEEEEccCcHH
Confidence 12221 2479999999994
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-05 Score=86.12 Aligned_cols=151 Identities=18% Similarity=0.179 Sum_probs=75.2
Q ss_pred CC-CEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC--
Q 010015 99 KP-DVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-- 175 (520)
Q Consensus 99 ~P-D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-- 175 (520)
+| ++++..||++++... ..+.. .+...+.+. ..+ +-+.++||||+.++. +.+.++.+..+
T Consensus 49 ~~~~lvl~~GD~~~g~~~---~~~~~-~~~~~~~ln------~lg-~d~~~~GNHEfd~g~------~~l~~~~~~~~~~ 111 (516)
T 1hp1_A 49 GGSVLLLSGGDINTGVPE---SDLQD-AEPDFRGMN------LVG-YDAMAIGNHEFDNPL------TVLRQQEKWAKFP 111 (516)
T ss_dssp TCEEEEEECSCCSSSCHH---HHTTT-THHHHHHHH------HHT-CCEEECCGGGGSSCH------HHHHHHHHHCSSC
T ss_pred CCCEEEEeCCccCCCcch---hhhcC-CcHHHHHHh------ccC-CCEEeeccccccCCH------HHHHHHHhhCCCC
Confidence 45 799999999975421 01000 001112222 122 236789999986542 22333333221
Q ss_pred ----------------CcceEEEeCCE--EEEEEeCCCCCC--CCC---C-CC---CHHHHHHHHHhhccCCCCCeEEEE
Q 010015 176 ----------------KRNYRFTVGKV--EFIVVDAQTLDG--HPE---G-NL---AAATWDFVKNVSIDFQLLPRVLLT 228 (520)
Q Consensus 176 ----------------~~ny~~~ig~~--~fV~LDS~~l~g--~~~---g-~i---~~~ql~wL~~ll~~~~~~p~ILlt 228 (520)
..+..+++++. -|+++.+..... .+. + .+ .+...++++++..+.....+|+++
T Consensus 112 ~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~ 191 (516)
T 1hp1_A 112 LLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAAT 191 (516)
T ss_dssp EECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred EEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 11234567775 566665542211 111 0 01 122345566554322346789999
Q ss_pred ccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh-C--CcEEEECCccCCC
Q 010015 229 HIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI-K--PVLVLSGHDHDQC 294 (520)
Q Consensus 229 H~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l-~--p~lVfsGH~H~~c 294 (520)
|.|...... .++ | . .....|.+.+ . .++|++||+|...
T Consensus 192 H~g~~~~~~--~~~-----------------------~-~--~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 192 HMGHYDNGE--HGS-----------------------N-A--PGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp ESCCCGGGC--CTT-----------------------S-C--CCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cCCccCCCc--ccc-----------------------c-C--chHHHHHHhCCCCceeEEECCCCCccc
Confidence 999865311 110 0 0 0023455554 3 6999999999754
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.9e-05 Score=82.45 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=22.6
Q ss_pred HHHHHHHh--CCcEEEECCccCCCcEEeccCCCCeEEEEeCc
Q 010015 273 SNRLLDLI--KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGT 312 (520)
Q Consensus 273 s~~LL~~l--~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S 312 (520)
..+|.+.+ +.++|++||+|....... +++.-+..++
T Consensus 229 ~~~la~~~~~giDlIlgGHtH~~~~~~v----~~~~ivqag~ 266 (527)
T 3qfk_A 229 GYAMLEAFSKDIDIFITGHQHRQIAERF----KQTAVIQPGT 266 (527)
T ss_dssp HHHHHHHHGGGCSEEECCSSCCEEEEEE----TTEEEEEECS
T ss_pred HHHHHHhcCCCCcEEEECCCCcccceEE----CCEEEeccCh
Confidence 34566666 469999999998654222 3455454444
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.02 E-value=1e-05 Score=88.24 Aligned_cols=48 Identities=19% Similarity=0.128 Sum_probs=26.7
Q ss_pred CCC-EEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 99 KPD-VILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 99 ~PD-~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
+|| +++..||++++... ..+.. -+...+.+. ..+. -+.++||||+.++
T Consensus 73 ~~~~l~l~~GD~~~gs~~---~~~~~-~~~~~~~ln------~lg~-d~~~lGNHEfd~g 121 (552)
T 2z1a_A 73 AKNPLFLDAGDVFQGTLY---FNQYR-GLADRYFMH------RLRY-RAMALGNHEFDLG 121 (552)
T ss_dssp SSSEEEEECSCCSSSSHH---HHHHT-THHHHHHHH------HTTC-CEEECCGGGGTTC
T ss_pred CCCEEEEeCCCCCCCcHH---HHHhC-CcHHHHHHH------hcCC-CccccccccccCC
Confidence 577 88999999986521 11110 011223332 1222 3678999998654
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00014 Score=79.54 Aligned_cols=114 Identities=11% Similarity=-0.016 Sum_probs=57.1
Q ss_pred CC-EEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhCC--
Q 010015 100 PD-VILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFGK-- 176 (520)
Q Consensus 100 PD-~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~-- 176 (520)
|| +++..||++++.. ...+.. -+...+++. ..+.+++ + ||||+.++. +.+.++.+.++-
T Consensus 123 pd~Lll~~GD~~~gs~---~~~~~~-g~~~~~~ln------~lg~d~~-~-GNHEfd~G~------~~l~~~l~~~~~p~ 184 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG---LSLLTR-GEAVVRWQN------LVGVDHM-V-SHWEWTLGR------ERVEELLGLFRGEF 184 (562)
T ss_dssp CCEEEEECSCCSSSSH---HHHHHT-THHHHHHHH------HHTCCEE-C-CSGGGGGCH------HHHHHHHHHCCSEE
T ss_pred CCEEEEeCCCCCCcch---hhhhhC-CHHHHHHHH------hhCCcEE-e-cchhcccCH------HHHHHHHHhCCCCE
Confidence 88 8999999998652 111110 011222332 2344554 6 999976542 334444443331
Q ss_pred ----------------cceEEEeCCE--EEEEEeCCCCC--CC-------CCCCCCHHHHHHHHHhhccCCCCCeEEEEc
Q 010015 177 ----------------RNYRFTVGKV--EFIVVDAQTLD--GH-------PEGNLAAATWDFVKNVSIDFQLLPRVLLTH 229 (520)
Q Consensus 177 ----------------~ny~~~ig~~--~fV~LDS~~l~--g~-------~~g~i~~~ql~wL~~ll~~~~~~p~ILltH 229 (520)
.+..+++++. -||++.+.... .. ......+...++++++.. .....+|+++|
T Consensus 185 L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~d~iIvLsH 263 (562)
T 2wdc_A 185 LSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA-EGANAVVLLSH 263 (562)
T ss_dssp CCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH-TTCSEEEEEEC
T ss_pred EEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH-CCCCEEEEEeC
Confidence 1224567775 45666543210 00 001111333455555543 23457899999
Q ss_pred cCC
Q 010015 230 IPL 232 (520)
Q Consensus 230 ~PL 232 (520)
.|.
T Consensus 264 ~g~ 266 (562)
T 2wdc_A 264 NGM 266 (562)
T ss_dssp SCH
T ss_pred CCC
Confidence 975
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.6e-05 Score=83.93 Aligned_cols=46 Identities=20% Similarity=0.287 Sum_probs=25.3
Q ss_pred CEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 101 DVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 101 D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
++++..||++++....+...... ..+++. ..+.. +.++||||+.++
T Consensus 75 ~l~l~~GD~~~g~~~~~~~~g~~----~~~~ln------~lg~d-~~~~GNHEfd~g 120 (546)
T 4h2g_A 75 VLLLDAGDQYQGTIWFTVYKGAE----VAHFMN------ALRYD-AMALGNHEFDNG 120 (546)
T ss_dssp EEEEECSCCSSSSHHHHHHTTHH----HHHHHH------HHTCS-EEECCGGGGTTH
T ss_pred EEEEECCccCCCchhhhhhCChH----HHHHHH------hcCCc-EEeccCcccccC
Confidence 69999999998762111000011 222222 12223 577999998664
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0001 Score=78.45 Aligned_cols=218 Identities=15% Similarity=0.140 Sum_probs=108.6
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHH--HHhhCCCCCCEEEEcCCcCCCCCCCCH-------
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAF--FASILPFKPDVILFLGDHFDGGPYLSD------- 118 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~--~~~~~~~~PD~VI~lGDL~d~G~~~s~------- 118 (520)
.....+++|||+|+++.... ....+ .+..|+-.-..- .......+...+|+.||++++-....+
T Consensus 198 ~~~~~ialVSGL~igs~~~~------~~~~~-~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y 270 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGE------SLLGT-QLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKY 270 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHH------HHHHH-HHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------
T ss_pred CCCCEEEEECCcccCCCccc------chHHH-HHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhc
Confidence 35578999999999864210 01111 122222110000 000123467999999999986421000
Q ss_pred ---H---HHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccC--CCHH---HHHHHHHHhCCc-ceEEEeCCE
Q 010015 119 ---E---EWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLS--HKPE---IVRRYEKEFGKR-NYRFTVGKV 186 (520)
Q Consensus 119 ---~---e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~--~~~~---~~~rf~~~Fg~~-ny~~~ig~~ 186 (520)
+ .-.+.++.|.+.+..- ...+||..+|||||-.....-+ +.+. ...+|...-.-+ -|.++++|+
T Consensus 271 ~~~~~~~~~~~~~~~ld~~L~~l----~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~ 346 (476)
T 3e0j_A 271 LTKKTQAASVEAVKMLDEILLQL----SASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGV 346 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH----HTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTE
T ss_pred cccccchhhHHHHHHHHHHHHhc----ccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCE
Confidence 0 0113455565555432 3578999999999964321100 1110 011111100112 267899999
Q ss_pred EEEEEeCCCCCCCC-CCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCC-CCCcccchhhhccCCCccchh
Q 010015 187 EFIVVDAQTLDGHP-EGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPH-RSSPIINQRIVRTGHSQEILY 264 (520)
Q Consensus 187 ~fV~LDS~~l~g~~-~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~-r~~~~~~~~~~~~~~~~g~~y 264 (520)
+|++--.+.++.-. ... .+..++.+++.+.-. |.-+-.++-..|-|. ...|++
T Consensus 347 ~~LgtsGqnidDi~ky~~-~~~~l~~me~~Lkwr---------HlAPTaPdTl~~yP~~~~DpfV--------------- 401 (476)
T 3e0j_A 347 RFLGTSGQNVSDIFRYSS-MEDHLEILEWTLRVR---------HISPTAPDTLGCYPFYKTDPFI--------------- 401 (476)
T ss_dssp EEEECSSHHHHHHHHHSC-CCCHHHHHHHHHHBT---------CSCTTSCCC------CCSCTTS---------------
T ss_pred EEEEECCCCHHHHHhcCC-CCCHHHHHHHHHHHh---------ccCCCCCCceeeccCCCCCcee---------------
Confidence 98876543221000 000 122456677765432 543333343456553 222221
Q ss_pred ccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccC-CCCeEEEEeCcee
Q 010015 265 QNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESN-HEHIKEHTVGTIS 314 (520)
Q Consensus 265 qn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~-~~~i~Eitv~S~S 314 (520)
++ --|+++|+||.|.+.......+ +..++-++||+||
T Consensus 402 ------------i~-~~PhVyf~Gnq~~f~t~~~~~~~~~~vrLv~VP~Fs 439 (476)
T 3e0j_A 402 ------------FP-ECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFS 439 (476)
T ss_dssp ------------CS-SCCSEEEEEEESSCEEEEEECSSCCEEEEEEEECHH
T ss_pred ------------ec-CCCcEEEeCCCCccceeEEecCCCCeEEEEEcCCcC
Confidence 11 1379999999999977665432 3468999999998
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=79.35 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=15.7
Q ss_pred HHHHHHhC-CcEEEECCccCCC
Q 010015 274 NRLLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 274 ~~LL~~l~-p~lVfsGH~H~~c 294 (520)
.+|.+.+. .++|++||+|...
T Consensus 217 ~~la~~~~giDlIlgGHtH~~~ 238 (509)
T 3ive_A 217 IQTASQVKGLDILITGHAHVGT 238 (509)
T ss_dssp HHHHHHCSSCCEEEEESSCCCC
T ss_pred HHHHhcCCCCcEEEeCCcCccC
Confidence 45666664 5899999999754
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00051 Score=73.18 Aligned_cols=30 Identities=7% Similarity=0.109 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEE
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVS 297 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~ 297 (520)
...+...++++..+.++|+.||.+...-+.
T Consensus 384 fg~~~~~~fl~~~~~~~iir~H~~~~~g~~ 413 (477)
T 1wao_1 384 FGPDVTKAFLEENNLDYIIRSHEVKAEGYE 413 (477)
T ss_dssp ECHHHHHHHHHHTTCCEEEECCSCCTEEEE
T ss_pred ECHHHHHHHHHHcCCeEEEECCCCCcCCeE
Confidence 467788999999999999999998765444
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0002 Score=78.51 Aligned_cols=20 Identities=10% Similarity=0.268 Sum_probs=14.5
Q ss_pred HHHHHhC-CcEEEECCccCCC
Q 010015 275 RLLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l~-p~lVfsGH~H~~c 294 (520)
+|.+.+. .++|++||+|...
T Consensus 211 ~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp HHHHHCSSCCEEEECSSCCEE
T ss_pred HHHHhCCCCCEEEeCCCCccc
Confidence 3455453 5899999999854
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0003 Score=69.28 Aligned_cols=65 Identities=22% Similarity=0.246 Sum_probs=40.7
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCC-CEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKP-DVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~P-D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
.|+++|||+|- . + . .+.+.+..+ ...++ |.+|++||++|.|.. ..+ .++.+.
T Consensus 19 ~~i~visDiHg--~--~-----------~------~l~~~l~~~-~~~~~~d~ii~~GD~vd~g~~--~~~---~l~~l~ 71 (262)
T 2qjc_A 19 GRVIIVGDIHG--C--R-----------A------QLEDLLRAV-SFKQGSDTLVAVGDLVNKGPD--SFG---VVRLLK 71 (262)
T ss_dssp SCEEEECCCTT--C--H-----------H------HHHHHHHHH-TCCTTTSEEEECSCCSSSSSC--HHH---HHHHHH
T ss_pred CeEEEEeCCCC--C--H-----------H------HHHHHHHHH-hccCCCCEEEEecCCCCCCCC--HHH---HHHHHH
Confidence 48999999992 1 1 0 133444333 33344 999999999998842 222 222222
Q ss_pred HHhccccCCCCCCceEEEccCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
+ .+++.|.||||.
T Consensus 72 ~------------~~~~~v~GNHd~ 84 (262)
T 2qjc_A 72 R------------LGAYSVLGNHDA 84 (262)
T ss_dssp H------------HTCEECCCHHHH
T ss_pred H------------CCCEEEeCcChH
Confidence 1 258999999994
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00083 Score=66.93 Aligned_cols=68 Identities=21% Similarity=0.187 Sum_probs=42.1
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+++++|+|+|-. + . .+.+.+..+....++|.++++||++|.|.. ..+ .++.+.+
T Consensus 1 M~i~vigDiHG~----~-----------~------~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~--s~~---~l~~l~~ 54 (280)
T 2dfj_A 1 MATYLIGDVHGC----Y-----------D------ELIALLHKVEFTPGKDTLWLTGDLVARGPG--SLD---VLRYVKS 54 (280)
T ss_dssp -CEEEECCCCSC----H-----------H------HHHHHHHHTTCCTTTCEEEECSCCSSSSSC--HHH---HHHHHHH
T ss_pred CeEEEEecCCCC----H-----------H------HHHHHHHHhCCCCCCCEEEEeCCcCCCCCc--cHH---HHHHHHh
Confidence 368999999931 1 0 133444433333578999999999998842 222 2222222
Q ss_pred HhccccCCCCCCceEEEccCCCCC
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDi 154 (520)
...+++.|.||||.
T Consensus 55 ----------l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 55 ----------LGDSVRLVLGNHDL 68 (280)
T ss_dssp ----------TGGGEEECCCHHHH
T ss_pred ----------CCCceEEEECCCcH
Confidence 22379999999994
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.016 Score=63.24 Aligned_cols=15 Identities=7% Similarity=-0.261 Sum_probs=12.6
Q ss_pred CCceEEEEEeCCCCC
Q 010015 48 DGYDKVAVIADPQIM 62 (520)
Q Consensus 48 ~~~~rilvISDpHL~ 62 (520)
...++|++++|.|-.
T Consensus 13 ~~~l~ILhtnD~Hg~ 27 (557)
T 3c9f_A 13 WNDINFVHTTDTHGW 27 (557)
T ss_dssp CCSEEEEEECCCTTC
T ss_pred ceEEEEEEEcccccC
Confidence 457999999999963
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.016 Score=59.14 Aligned_cols=13 Identities=8% Similarity=-0.128 Sum_probs=11.2
Q ss_pred CceEEEEEeCCCC
Q 010015 49 GYDKVAVIADPQI 61 (520)
Q Consensus 49 ~~~rilvISDpHL 61 (520)
-.++|++.+|.|-
T Consensus 7 ~~l~Il~tnD~Hg 19 (339)
T 3jyf_A 7 VDLRIMETTDLHS 19 (339)
T ss_dssp EEEEEEEECCCTT
T ss_pred eeEEEEEEeeCCC
Confidence 4599999999994
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0012 Score=67.67 Aligned_cols=27 Identities=19% Similarity=0.318 Sum_probs=22.1
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQC 294 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c 294 (520)
...+..+++++..+.++|+.||+|...
T Consensus 265 fg~~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 265 FTEAELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp CCHHHHHHHHHHHTCSEEEECSSCCSS
T ss_pred CChHHHHHHHHHCCCcEEEECCCcccc
Confidence 455667788888899999999999764
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.032 Score=56.97 Aligned_cols=20 Identities=30% Similarity=0.323 Sum_probs=14.7
Q ss_pred HHHHHHhC-CcEEEECCccCC
Q 010015 274 NRLLDLIK-PVLVLSGHDHDQ 293 (520)
Q Consensus 274 ~~LL~~l~-p~lVfsGH~H~~ 293 (520)
..|.+.+. .++|+.||+|..
T Consensus 233 ~~lA~~v~giD~IigGHsH~~ 253 (341)
T 3gve_A 233 FDLATKTKGIDAIISGHQHGL 253 (341)
T ss_dssp HHHHHHCSCCCEEEECSSCCE
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 34555553 499999999985
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0076 Score=61.03 Aligned_cols=26 Identities=8% Similarity=0.189 Sum_probs=22.3
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~ 293 (520)
..++..+++++..+-++|+-||.-..
T Consensus 231 fg~~~~~~fl~~n~l~~iiR~Hq~~~ 256 (315)
T 3h63_A 231 FGPDVTKAFLEENNLDYIIRSHEVKA 256 (315)
T ss_dssp ECHHHHHHHHHHHTCSEEEECCSCCT
T ss_pred ECHHHHHHHHHHcCCcEEEEeceeec
Confidence 56788899999999999999998643
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.011 Score=63.74 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=14.7
Q ss_pred HHHHHhC-CcEEEECCccCCC
Q 010015 275 RLLDLIK-PVLVLSGHDHDQC 294 (520)
Q Consensus 275 ~LL~~l~-p~lVfsGH~H~~c 294 (520)
.|.+.+. .++|+.||+|...
T Consensus 203 ~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 203 LIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp HHHHHSTTCCEEECCSSCCCB
T ss_pred HHHhcCCCCCeeccCCcccee
Confidence 4555554 4899999999753
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.013 Score=59.85 Aligned_cols=58 Identities=22% Similarity=0.170 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCce---eecCCCCCCcEEEEEEEc
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTI---SWQQGNLYPSFRLLSASN 331 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~---S~~~g~~~Pgf~llsl~~ 331 (520)
..++..+++++..+-++|+-||.-...-+.... +-+-+||=|. |-..+|. - .++.+.+
T Consensus 235 FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~---~~~liTvfSapnYc~~~~N~-~--a~~~i~~ 295 (335)
T 3icf_A 235 FGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQ---KGKLMTVFSAPNYCDSQGNL-G--GVIHVVP 295 (335)
T ss_dssp ECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEG---GGTEEEECCCTTGGGTSCCE-E--EEEEECT
T ss_pred eCHHHHHHHHHHCCCeEEEEcCceecCeEEEec---CCcEEEEECCcccCCCCCCc-e--EEEEEec
Confidence 567889999999999999999986433332211 1234666444 3444542 2 3455655
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0089 Score=60.35 Aligned_cols=27 Identities=15% Similarity=0.016 Sum_probs=22.3
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQC 294 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c 294 (520)
..++..+++++..+-++|+-||.-...
T Consensus 220 fG~~~~~~fl~~n~l~~iir~Hq~~~~ 246 (309)
T 2ie4_C 220 FGQDISETFNHANGLTLVSRAHQLVME 246 (309)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTE
T ss_pred cCHHHHHHHHHHcCCeEEEecCcceeC
Confidence 467788999999999999999976543
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.011 Score=60.12 Aligned_cols=44 Identities=11% Similarity=-0.013 Sum_probs=28.7
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S 314 (520)
.......++++..+-++++-||.-...-+.... +-.-+||-|.+
T Consensus 227 fG~~~~~~fl~~~~l~liir~Hq~v~~Gy~~~~---~~~lvTvfSap 270 (330)
T 1fjm_A 227 FGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFA---KRQLVTLFSAP 270 (330)
T ss_dssp ECHHHHHHHHHHHTCSEEEECCSCCTTSEEEET---TTTEEEEBCCT
T ss_pred eChHHHHHHHHhCCCceEecccccccCCeEEcc---CCeEEEEeCCc
Confidence 466778889998888999999976544443221 11356665543
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.08 Score=52.63 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=28.0
Q ss_pred CCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 99 KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 99 ~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
+||++++-||-+.+|...+.+. ++.+.. .+.-+ ...|||++.++
T Consensus 34 ~~d~vi~Ngen~~gG~g~~~~~----~~~ln~----------~G~Da-~TlGNHefD~g 77 (281)
T 1t71_A 34 QADLVIVNAENTTHGKGLSLKH----YEFLKE----------AGVNY-ITMGNHTWFQK 77 (281)
T ss_dssp TCSEEEEECTBTTTTSSCCHHH----HHHHHH----------HTCCE-EECCTTTTCCG
T ss_pred CCCEEEEcCCCCCCCCCcCHHH----HHHHHh----------cCCCE-EEEccCcccCC
Confidence 5899999999998775555432 221221 23333 45599998776
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.021 Score=57.29 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=22.2
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQ 293 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~ 293 (520)
..++..+++++..+-++|+-||.=..
T Consensus 226 fG~~~~~~fl~~n~l~~IiR~Hq~v~ 251 (299)
T 3e7a_A 226 FGAEVVAKFLHKHDLDLICRAHQVVE 251 (299)
T ss_dssp ECHHHHHHHHHHHTCSEEEECCSCCT
T ss_pred eCHHHHHHHHHHCCCeEEEEcCeeee
Confidence 46788999999999999999998543
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.47 E-value=0.025 Score=60.64 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=37.8
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCC---CCeEEEEeCcee---ecCCCCCCcEEEEEEEcC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNH---EHIKEHTVGTIS---WQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~---~~i~Eitv~S~S---~~~g~~~Pgf~llsl~~~ 332 (520)
..++...++++..+-++|+-||.-...-+...... +.-.-+||=|.+ -..+| ..+ ++.+.++
T Consensus 260 FG~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N-~gA--vl~i~~~ 327 (521)
T 1aui_A 260 YSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNN-KAA--VLKYENN 327 (521)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCC-CEE--EEEEETT
T ss_pred cCHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCc-eEE--EEEEeCC
Confidence 46788899999999999999998765444432111 112467775544 33444 334 4555554
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.029 Score=57.67 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=51.5
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCC---CCeEEEEeCcee---ecCCCCCCcEEEEEEEcCCcccCCccc
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNH---EHIKEHTVGTIS---WQQGNLYPSFRLLSASNSALLNMSNLE 341 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~---~~i~Eitv~S~S---~~~g~~~Pgf~llsl~~~~~~~~~~~~ 341 (520)
..++...++++..+-++|+=||-=...-+...... +.-+-+||=|.+ -..+|. -+ ++.+.++.. .-.+
T Consensus 247 FG~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~-~a--~l~~~~~~~---~~~~ 320 (357)
T 3ll8_A 247 YSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNK-AA--VLKYENNVM---NIRQ 320 (357)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCC-EE--EEEEETTEE---EEEE
T ss_pred EChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCcc-EE--EEEEECCcc---eEEE
Confidence 46778899999999999999997544333321111 112456765544 444442 33 445554421 1111
Q ss_pred ccEEEeEEeccccceeehhhHHHH
Q 010015 342 EAVLTRLCFLPMQTHIYIGYLLLF 365 (520)
Q Consensus 342 ~~~~t~~C~LP~q~~~~~~Y~~~~ 365 (520)
....-++..+|+-.-+|.|=.+++
T Consensus 321 f~~~~hp~~~p~~~~~f~ws~p~~ 344 (357)
T 3ll8_A 321 FNCSPHPYWLPNFMDVFTWSLPFV 344 (357)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ecCCCCCCcCCCcceeeEecHhhH
Confidence 222335678888766666655543
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=90.39 E-value=5.5 Score=38.72 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=25.8
Q ss_pred CEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcc
Q 010015 101 DVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 101 D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
|++++-|+-+.+|...+.+.+. .+.. .+.-+. ..|||++...
T Consensus 30 d~vi~nge~~~~G~g~~~~~~~----~l~~----------~G~Da~-TlGNHefD~~ 71 (255)
T 1t70_A 30 DFVIVNMENSAGGFGMHRDAAR----GALE----------AGAGCL-TLGNHAWHHK 71 (255)
T ss_dssp SEEEEECTBTTTTSSCCHHHHH----HHHH----------HTCSEE-ECCTTTTSST
T ss_pred CEEEECCCCccCCcCCCHHHHH----HHHh----------CCCCEE-EeccccccCc
Confidence 9999988888777555544321 1221 233344 4599998754
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=89.00 E-value=17 Score=35.12 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=51.6
Q ss_pred CEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHH-------
Q 010015 101 DVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE------- 173 (520)
Q Consensus 101 D~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~------- 173 (520)
|++++-|.-+..|...+.+.+.. +. . .+.-+. ..|||++.... +..|.+.
T Consensus 30 d~vi~ngen~~~G~g~~~~~~~~----l~---~-------~G~D~~-T~GNHefD~~~--------l~~~l~~~~~vrpa 86 (252)
T 2z06_A 30 DLVIANGENAARGKGLDRRSYRL----LR---E-------AGVDLV-SLGNHAWDHKE--------VYALLESEPVVRPL 86 (252)
T ss_dssp SEEEEECTTTTTTSSCCHHHHHH----HH---H-------HTCCEE-ECCTTTTSCTT--------HHHHHHHSSEECCT
T ss_pred CEEEEeCCCccCCCCcCHHHHHH----HH---h-------CCCCEE-EeccEeeECch--------HHHHhccCCceEee
Confidence 88887776665665556443221 22 1 234454 66999987542 1122211
Q ss_pred -h-----CCcceEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCeEEEEcc
Q 010015 174 -F-----GKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHI 230 (520)
Q Consensus 174 -F-----g~~ny~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~ 230 (520)
| |..+..++.++..+-+++-......+ .+..+ .+-+++...+.+-.-+|+++|.
T Consensus 87 N~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~--~~~~p-f~~~~~~v~~lk~d~IIv~~H~ 146 (252)
T 2z06_A 87 NYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMD--PLDDP-FRALDRLLEEEKADYVLVEVHA 146 (252)
T ss_dssp TSCSSCSSCSEEEEEETTEEEEEEEEECCTTSC--CCCCH-HHHHHHHHHHCCCSEEEEEEEC
T ss_pred cCCCCCCCCCeEEEEECCEEEEEEEcccccCcc--ccCCH-HHHHHHHHHHhCCCEEEEEeCC
Confidence 1 22344678888877666543222111 12221 2223333322223457888884
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.41 E-value=1.7 Score=45.91 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=51.7
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCC------C-----
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPY------L----- 116 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~------~----- 116 (520)
..++++++.|.|.-.++. ... .. |...+..+....+||++|++|.++|.... .
T Consensus 145 ~~~l~ivvAsGPyT~sdn-l~y------ep---------L~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~ 208 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDN-FSL------EL---------LQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 208 (460)
T ss_dssp SSCEEEEEEESCCSCSSC-CCC------HH---------HHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTT
T ss_pred CCCcEEEEEeCCccCCCc-cCh------HH---------HHHHHHHHHhccCCCEEEEecCcccccCcccccCccccccc
Confidence 368999999999986542 210 01 22223333333589999999999976410 0
Q ss_pred ---CHHHHHHHHHH-HHHHhccccCCCCCCceEEEccCCCCCC
Q 010015 117 ---SDEEWQESLNR-FKHIFGLKSQDRFRDIRVHFLPGNHDNG 155 (520)
Q Consensus 117 ---s~~e~~~~~~R-f~~if~~~~~~~~~~iPv~~vpGNHDig 155 (520)
.+..|++.++. +..++..- ...+.++.|||+||..
T Consensus 209 ~~~~~~t~~~lF~~~i~~il~~l----~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 209 FKTQPKTLDELFLKLFTPILKTI----SPHIQTVLIPSTKDAI 247 (460)
T ss_dssp CSSCCSSHHHHHHHHTHHHHTTS----CTTSEEEEECCTTBTT
T ss_pred ccccccCHHHHHHHHHHHHHHhc----cCCCEEEEeCCccccc
Confidence 01223332222 23333321 3568899999999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 520 | ||||
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 5e-06 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 1e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 2e-04 | |
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 0.001 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 0.003 |
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 45.8 bits (107), Expect = 5e-06
Identities = 22/236 (9%), Positives = 55/236 (23%), Gaps = 44/236 (18%)
Query: 81 FFTDLYMRRAFFASILPF----KPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKS 136
+ R + +PD+++ +G+ + E R + +
Sbjct: 7 AIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 66
Query: 137 QDRF--------------RDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE-FGKRNYRF 181
+ + ++ +PG +D L E Y +
Sbjct: 67 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAG 126
Query: 182 TVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSID----FQLLPRVLLTHIPLYRRDE 237
G+ E I + E + + + + V + + P
Sbjct: 127 WRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPI---- 182
Query: 238 TPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQ 293
+ + N ++ + P + + GH
Sbjct: 183 -----------------GEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 45.1 bits (105), Expect = 1e-05
Identities = 37/281 (13%), Positives = 71/281 (25%), Gaps = 33/281 (11%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFD 111
+IAD Q D ++ L R + ++ LGD D
Sbjct: 5 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLL---RDAVLQWRRERVQCVVQLGDIID 61
Query: 112 GGPYLSDEEWQESLNRFKHIFGLKSQDRF-----RDIRVHFLPGNHDNGYAALLSHKPEI 166
G + +L+ S D + P + + +
Sbjct: 62 GHNR-RRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDT 120
Query: 167 VRRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHP-----EGNLAAATWDFVKNVSIDFQL 221
+ F+++DA L E + + N ++
Sbjct: 121 GSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLN 180
Query: 222 LPRVLLTHIPLYRRDETPCGPHRSSPIINQ-----------------RIVRTGHSQEILY 264
LP V + + + + + + L
Sbjct: 181 LPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLA 240
Query: 265 QNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHI 305
N+ E + L + ++GHDHD + S +HI
Sbjct: 241 WNH--EAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHI 279
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 38/275 (13%), Positives = 78/275 (28%), Gaps = 44/275 (16%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFD 111
+A I+D + + A + L + L +PD ++ GD +
Sbjct: 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQL--------NALRERPDAVVVSGDIVN 53
Query: 112 GGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYE 171
G R + + + ++ +PGNHD+ A L + + +
Sbjct: 54 CG-------------RPEEYQVARQILGSLNYPLYLIPGNHDD-KALFLEYLQPLCPQLG 99
Query: 172 KEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLLTHIP 231
+ + +D + G +G L T +++ + P + H P
Sbjct: 100 SDANNMRCAVDDFATRLLFID-SSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHP 158
Query: 232 LYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDH 291
P G + PI + + + GH+H
Sbjct: 159 PL-----PLGNAQMDPIACEN----------------GHRLLALVERFPSLTRIFCGHNH 197
Query: 292 DQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRL 326
+ TV + + + P + L
Sbjct: 198 SLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDL 232
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 38.7 bits (89), Expect = 0.001
Identities = 24/152 (15%), Positives = 45/152 (29%), Gaps = 21/152 (13%)
Query: 93 ASILPFKPDVILFLGD--HFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPG 150
+ P K +LF+GD + D P + W +G ++ + G
Sbjct: 29 YELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT--------WGRFTERSVAYQPWIWTAG 80
Query: 151 NHDNGYAALLSHKPEIV---------RRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPE 201
NH+ +A ++ + Y IV+ + + G
Sbjct: 81 NHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGT 140
Query: 202 GNLAAATWDFVKNVSIDFQLLPRVLLTHIPLY 233
+ K + ++L H PLY
Sbjct: 141 PQYTWLKKELRKVKRSETPW--LIVLMHSPLY 170
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 37.5 bits (85), Expect = 0.003
Identities = 35/258 (13%), Positives = 66/258 (25%), Gaps = 32/258 (12%)
Query: 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGD--H 109
+ + D + H ++ +A ++ D IL LGD +
Sbjct: 6 RFVAVGDWGGVPNAPFHTA------------REMANAKAIATTVKTLGADFILSLGDNFY 53
Query: 110 FDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNH--DNGYAALLSHKPEIV 167
F G D+ +QE+ L++ H GN Y+ +
Sbjct: 54 FTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPS 113
Query: 168 RRYEKEFGKRNYRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSIDFQLLPRVLL 227
Y F + V ++D TL G+ + ++ QL
Sbjct: 114 PYYRLRFK---IPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL------ 164
Query: 228 THIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIKPVLVLS 287
++ + + K L
Sbjct: 165 ---AWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTH----KVTAYLC 217
Query: 288 GHDHDQCTVSHESNHEHI 305
GHDH+ + E+ +
Sbjct: 218 GHDHNLQYLQDENGLGFV 235
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 520 | |||
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.95 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.92 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 99.85 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.79 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.72 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.71 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.28 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.25 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.2 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.19 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.14 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.95 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.92 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.66 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.14 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.73 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.86 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.55 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 93.84 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 90.94 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 88.22 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 87.59 |
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.95 E-value=1.3e-26 Score=225.95 Aligned_cols=228 Identities=15% Similarity=0.164 Sum_probs=150.6
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhh-CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASI-LPFKPDVILFLGDHFDGGPYLSDEEWQESLNR 127 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~-~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~R 127 (520)
..+||++|||+||....... .........++++++.+. ...+||+|+++|||++.| +.++|+...+.
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~---------~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g---~~~~~~~~~~~ 70 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRL---------YGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG---EPAAYRKLRGL 70 (256)
T ss_dssp CSEEEEEECCCCBC-------------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSC---CHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCccc---------ccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC---ChhHHHHHHHH
Confidence 57999999999996542211 001111223566665543 356899999999999988 56665543333
Q ss_pred HHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh-------CCcceEEEeCCEEEEEEeCCCCCCCC
Q 010015 128 FKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF-------GKRNYRFTVGKVEFIVVDAQTLDGHP 200 (520)
Q Consensus 128 f~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F-------g~~ny~~~ig~~~fV~LDS~~l~g~~ 200 (520)
+.+... ..++|++.++||||.. ..|.+.+ +..++.+.+++++|+++||. ..+..
T Consensus 71 l~~~~~------~~~~p~~~v~GNHD~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~-~~~~~ 131 (256)
T d2hy1a1 71 VEPFAA------QLGAELVWVMGNHDDR------------AELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTS-VPGHH 131 (256)
T ss_dssp HHHHHH------HHTCEEEECCCTTSCH------------HHHHHHTTCCCCCCSCCCEEEEETTEEEEECCCB-CTTCS
T ss_pred hhhhhh------hcCCCEEEEcccccch------------hhhhhhhccccccccccceEEEecccceeeeeee-ecCCc
Confidence 333322 3568999999999931 1233333 33467889999999999995 45556
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHh
Q 010015 201 EGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLI 280 (520)
Q Consensus 201 ~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l 280 (520)
.+.+.++|++||++.+.+.+++++||++|+|++.... . ..+ .....+.+...++++..
T Consensus 132 ~g~~~~~~~~wl~~~L~~~~~~~~iv~~Hhpp~~~~~---~------~~~-------------~~~~~~~~~~~~i~~~~ 189 (256)
T d2hy1a1 132 HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVL---D------MAV-------------TVELRDQAALGRVLRGT 189 (256)
T ss_dssp SBCCCHHHHHHHHHHHTSCCTTCEEEECSSCSSCCSS---H------HHH-------------TTSBCCHHHHHHHHTTS
T ss_pred CCcccHHHHHHHHHHHHhhhccCceeeeecCCccccc---c------ccc-------------ccccccHHHHHHHHhcc
Confidence 6788999999999988877788999999999986421 0 000 00111233344555555
Q ss_pred CCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC-----------CCCCcEEEEEEEcCC
Q 010015 281 KPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG-----------NLYPSFRLLSASNSA 333 (520)
Q Consensus 281 ~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g-----------~~~Pgf~llsl~~~~ 333 (520)
+.+++||||+|..+.... ++++.+++||+|++.. ...|||.++.+++++
T Consensus 190 ~v~~~~~GH~H~~~~~~~----~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~ 249 (256)
T d2hy1a1 190 DVRAILAGHLHYSTNATF----VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 249 (256)
T ss_dssp SEEEEEECSSSSCEEEEE----TTEEEEECCCCC-------------------CEEEEEECSSC
T ss_pred CceEEEccccchhhceEE----CCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEECCC
Confidence 668999999998877655 6899999999886421 235799999998886
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.92 E-value=3.3e-24 Score=211.26 Aligned_cols=225 Identities=16% Similarity=0.175 Sum_probs=150.8
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHh-hCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFAS-ILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFK 129 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~-~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~ 129 (520)
++|++|||+||........+. ..++..++++++.+ ....+||+||++|||+|.| +.++| +.+.
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~---------~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~---~~~~y----~~~~ 64 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGF---------IDVNAANADVVSQLNALRERPDAVVVSGDIVNCG---RPEEY----QVAR 64 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTT---------BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC---CHHHH----HHHH
T ss_pred CEEEEEecCcCCCCccccccC---------cCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC---cchhH----HHHH
Confidence 489999999997543221111 11222355666554 2456899999999999988 56554 4477
Q ss_pred HHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHh---C----CcceEEEeCCEEEEEEeCCCCCCCCCC
Q 010015 130 HIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEF---G----KRNYRFTVGKVEFIVVDAQTLDGHPEG 202 (520)
Q Consensus 130 ~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~F---g----~~ny~~~ig~~~fV~LDS~~l~g~~~g 202 (520)
+++. ..++|++.+|||||.... ..+.+...+ + ...+.++.++++||++|+. ..+...+
T Consensus 65 ~~l~------~l~~p~~~i~GNHD~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~-~~~~~~~ 129 (271)
T d3d03a1 65 QILG------SLNYPLYLIPGNHDDKAL--------FLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSS-RAGTSKG 129 (271)
T ss_dssp HHHT------TCSSCEEEECCTTSCHHH--------HHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCC-CTTCSSB
T ss_pred HHHh------ccCCCEEEEecCccchHH--------HHHHhhhhhhccccccCcceEEEecCCeEEEecccc-cCCCCcc
Confidence 7776 468999999999995211 112222211 1 1246677789999999996 4556667
Q ss_pred CCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC-
Q 010015 203 NLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK- 281 (520)
Q Consensus 203 ~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~- 281 (520)
.+.++|++||++.+.+.+++|+||++|||++.... . +.+. .... +.+...++++...
T Consensus 130 ~l~~~ql~wL~~~L~~~~~~~~iv~~Hh~p~~~~~---~------~~d~----------~~~~---~~~~l~~~l~~~~~ 187 (271)
T d3d03a1 130 WLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN---A------QMDP----------IACE---NGHRLLALVERFPS 187 (271)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCEEEEESSCSSCCSC---T------TTGG----------GSBT---TTHHHHHHHHHCTT
T ss_pred eecHHHHHHHHHHHhhhccceeEEEeccCccccCc---c------cccc----------cccc---chHHHHHHHHhcCC
Confidence 89999999999988777789999999999986421 1 1110 0011 1223344566654
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCC-----------CCCCcEEEEEEEcC
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQG-----------NLYPSFRLLSASNS 332 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g-----------~~~Pgf~llsl~~~ 332 (520)
++++||||+|......+ ++++.+++||+|.+.. ...|||.+..+.+.
T Consensus 188 v~~vl~GH~H~~~~~~~----~g~~~~~~pst~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 245 (271)
T d3d03a1 188 LTRIFCGHNHSLTMTQY----RQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGE 245 (271)
T ss_dssp EEEEEECSSSSCEEEEE----TTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETT
T ss_pred eEEEEeCCcchhhceEE----CCEEEEEcCCceeecccCCCCCCcccccCCCEEEEEEEeCC
Confidence 47999999999888777 6899999999986631 12468888776544
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.85 E-value=2.8e-20 Score=187.45 Aligned_cols=229 Identities=15% Similarity=0.143 Sum_probs=138.4
Q ss_pred CCCCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHH-HhhCCCCCCEEEEcCCcCC-CC-CCCCHHHHH
Q 010015 46 GVDGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFF-ASILPFKPDVILFLGDHFD-GG-PYLSDEEWQ 122 (520)
Q Consensus 46 ~~~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~-~~~~~~~PD~VI~lGDL~d-~G-~~~s~~e~~ 122 (520)
+++.|+||++++|++... .. .+.+. ..+...+||+||++||++. ++ ......+|.
T Consensus 3 g~~~p~~F~v~GD~g~~~-------------~~---------~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd 60 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF-------------DS---------NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWD 60 (312)
T ss_dssp CSSCCEEEEEECSCCSBH-------------HH---------HHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred CCCCCEEEEEEeeCCCCC-------------ch---------HHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHH
Confidence 456799999999987421 00 11111 2346678999999999973 22 112344565
Q ss_pred HHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC----------CcceEEEeCCEEEEEEe
Q 010015 123 ESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG----------KRNYRFTVGKVEFIVVD 192 (520)
Q Consensus 123 ~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg----------~~ny~~~ig~~~fV~LD 192 (520)
...+.+..+. ..+|++.++||||+++...... .+....|...|. +.+|+|++|+++||+||
T Consensus 61 ~~~~~~~~~~--------~~~P~~~~~GNHD~~~~~~~~~-~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Ld 131 (312)
T d2qfra2 61 TWGRFTERSV--------AYQPWIWTAGNHEIEFAPEINE-TEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLS 131 (312)
T ss_dssp HHHHHHHHHH--------TTSCEEECCCGGGTCCBGGGTB-CSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECC
T ss_pred HHHHHHHHHh--------hcceEEEecccccccccccccc-cccccchhhhccCCccccCCCCCceEEEEECCEEEEEee
Confidence 5333333322 4589999999999865432111 111244555553 23689999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhhccC--CCC-CeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccC
Q 010015 193 AQTLDGHPEGNLAAATWDFVKNVSIDF--QLL-PRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYIT 269 (520)
Q Consensus 193 S~~l~g~~~g~i~~~ql~wL~~ll~~~--~~~-p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls 269 (520)
+.... ....+|++||++.++.. +.. .+|++.|+|+|......+. + +.. -
T Consensus 132 s~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~---~---------------~~~-----~ 183 (312)
T d2qfra2 132 SYSAY-----GRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFM---E---------------GEA-----M 183 (312)
T ss_dssp TTSCC-----STTSHHHHHHHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTT---T---------------THH-----H
T ss_pred ccccc-----cchHHHHHHHHHHHHHHhhcCCCEEEEEccccccccCCCCcc---c---------------chh-----H
Confidence 96321 12457999999966542 223 4899999999974321110 0 000 0
Q ss_pred HHHHHHHHHHhCCcEEEECCccCCCcEEecc---------------CCCCeEEEEeCceeec-------CCC--------
Q 010015 270 EESSNRLLDLIKPVLVLSGHDHDQCTVSHES---------------NHEHIKEHTVGTISWQ-------QGN-------- 319 (520)
Q Consensus 270 ~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~---------------~~~~i~Eitv~S~S~~-------~g~-------- 319 (520)
.+....||+..+.+++|+||+|.|.+...-. ...++..+++|+-.-. ...
T Consensus 184 r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~ 263 (312)
T d2qfra2 184 RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFR 263 (312)
T ss_dssp HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEE
T ss_pred HHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcCCCcccccccccCCCCCeeEEE
Confidence 1234567888899999999999986543110 1134567887765411 000
Q ss_pred -CCCcEEEEEEEcCC
Q 010015 320 -LYPSFRLLSASNSA 333 (520)
Q Consensus 320 -~~Pgf~llsl~~~~ 333 (520)
...||..|++.+..
T Consensus 264 ~~~~G~~~l~v~n~t 278 (312)
T d2qfra2 264 EASFGHGMFDIKNRT 278 (312)
T ss_dssp ECCCEEEEEEECSSS
T ss_pred ecCCCEEEEEEEcCC
Confidence 12488888887654
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=1.4e-21 Score=190.31 Aligned_cols=242 Identities=17% Similarity=0.137 Sum_probs=144.1
Q ss_pred ceEEEEEeCCCCCCCCCCCCC----CchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHH
Q 010015 50 YDKVAVIADPQIMDKTSLHLP----PKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESL 125 (520)
Q Consensus 50 ~~rilvISDpHL~~~~~~~~~----~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~ 125 (520)
-|||++|||+|+.+..+.... .+.... +-..++++++. ++..+||+||++||+++++....+ ...+.+
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~------~~~~l~~~v~~-i~~~~~DfVv~~GDl~~~~~~~~~-~~~~~~ 74 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRG------SADLLRDAVLQ-WRRERVQCVVQLGDIIDGHNRRRD-ASDRAL 74 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTH------HHHHHHHHHHH-HHHTTCSEEEECSCCBCTHHHHTT-CHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHH------HHHHHHHHHHH-HhhCCCCEEEECCCCCCCCCcchh-HHHHHH
Confidence 399999999999764322100 000001 11224555543 346789999999999986521111 122344
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccc-------c-CCCHHHHHHHHHHhCC---cceEEEeCCEEEEEEeCC
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAAL-------L-SHKPEIVRRYEKEFGK---RNYRFTVGKVEFIVVDAQ 194 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~-------~-~~~~~~~~rf~~~Fg~---~ny~~~ig~~~fV~LDS~ 194 (520)
+++.+.+. ..++|++.++||||...... . .........+...++. ..+....++++|+.+|+.
T Consensus 75 ~~~~~~~~------~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (320)
T d2nxfa1 75 DTVMAELD------ACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAY 148 (320)
T ss_dssp HHHHHHHH------TTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTT
T ss_pred HHHHHHHH------HcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCc
Confidence 55666665 46899999999999632110 0 0000000011111111 234567899999999875
Q ss_pred CCCC-----------------------------------------CCCCCCCHHHHHHHHHhhcc--CCCCCeEEEEccC
Q 010015 195 TLDG-----------------------------------------HPEGNLAAATWDFVKNVSID--FQLLPRVLLTHIP 231 (520)
Q Consensus 195 ~l~g-----------------------------------------~~~g~i~~~ql~wL~~ll~~--~~~~p~ILltH~P 231 (520)
.... ...+.+.++|++||++.+.. .+..++|+++|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~~viv~~H~p 228 (320)
T d2nxfa1 149 DLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLP 228 (320)
T ss_dssp SBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred ccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcCCceEEEECCC
Confidence 3210 01234689999999997643 3468899999999
Q ss_pred CCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHHHHHhC-CcEEEECCccCCCcEEeccCCCCeEEEEe
Q 010015 232 LYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRLLDLIK-PVLVLSGHDHDQCTVSHESNHEHIKEHTV 310 (520)
Q Consensus 232 L~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~-p~lVfsGH~H~~c~~~h~~~~~~i~Eitv 310 (520)
++...... .......+...++|.... .+++|+||+|..+...+. .++.++++
T Consensus 229 ~~~~~~~~------------------------~~~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~---~g~~~i~~ 281 (320)
T d2nxfa1 229 VHPCAADP------------------------ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDS---SGAQHITL 281 (320)
T ss_dssp CCTTSSCG------------------------GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECT---TSCEEEEC
T ss_pred CccCCCCC------------------------ccchhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeecc---CCCEEEEC
Confidence 98642210 000011122333444443 479999999998766553 68999999
Q ss_pred CceeecCCCCCCcEEEEEEEcCC
Q 010015 311 GTISWQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 311 ~S~S~~~g~~~Pgf~llsl~~~~ 333 (520)
|+++... ...++|.++++..|.
T Consensus 282 ~~~~~~~-~~~~~~~~~~v~~d~ 303 (320)
T d2nxfa1 282 EGVIETP-PHSHAFATAYLYEDR 303 (320)
T ss_dssp CCGGGCC-TTSCEEEEEEECSSE
T ss_pred CeeecCC-CCCCCEEEEEEECCE
Confidence 9976433 346899999999885
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=8e-20 Score=179.22 Aligned_cols=234 Identities=23% Similarity=0.294 Sum_probs=139.1
Q ss_pred CCceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCC-CCCC-CCHHHHHHHH
Q 010015 48 DGYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFD-GGPY-LSDEEWQESL 125 (520)
Q Consensus 48 ~~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d-~G~~-~s~~e~~~~~ 125 (520)
..++||++|+|+|......+.. +. ... ..+.+...+...+||+||++||++. .|.. ..+++|.+.
T Consensus 2 ~~~~~F~vigD~g~~~~~~~~~---~~--~~~-------~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~- 68 (302)
T d1utea_ 2 TPILRFVAVGDWGGVPNAPFHT---AR--EMA-------NAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQET- 68 (302)
T ss_dssp CCCEEEEEECSCCCCSSTTSSC---HH--HHH-------HHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHH-
T ss_pred CCCeEEEEEecCCCCCCccccc---HH--HHH-------HHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHH-
Confidence 4579999999999765443321 00 000 1122333445668999999999983 3321 223334332
Q ss_pred HHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHH-----hCCcceEEEe------CCEEEEEEeCC
Q 010015 126 NRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKE-----FGKRNYRFTV------GKVEFIVVDAQ 194 (520)
Q Consensus 126 ~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~-----Fg~~ny~~~i------g~~~fV~LDS~ 194 (520)
+..++... ...++|+++++||||+.... .....+... ++..+|.+.. ++++|+++|+.
T Consensus 69 --~~~~~~~~---~~~~~P~~~~~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~ 137 (302)
T d1utea_ 69 --FEDVFSDP---SLRNVPWHVLAGNHDHLGNV------SAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTV 137 (302)
T ss_dssp --TTTTSCSG---GGTTCCEEECCCHHHHHSCH------HHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHH
T ss_pred --HHHHhhhh---hhcCCceEEeeccccccccc------ccccchhhccccccCCCcccceeecccCCCCcEEEEEccce
Confidence 22222211 13688999999999964321 111122111 2233455443 47899999974
Q ss_pred CCCCC------------CCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccc
Q 010015 195 TLDGH------------PEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEI 262 (520)
Q Consensus 195 ~l~g~------------~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~ 262 (520)
..... ....+.++|++||++.++..+.+.+|++.|+|++..... + ...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~~~~~~iv~~h~~~~~~~~~--~---~~~--------------- 197 (302)
T d1utea_ 138 TLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEH--G---PTH--------------- 197 (302)
T ss_dssp HHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSS--C---CCH---------------
T ss_pred eEeecccccccccccccccchhHHHHHHHHHHHHHhhccCceEEEEeccccccCCC--C---Cch---------------
Confidence 22110 112245789999999888777888999999999864211 1 000
Q ss_pred hhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC--------------------CCCCC
Q 010015 263 LYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ--------------------GNLYP 322 (520)
Q Consensus 263 ~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~--------------------g~~~P 322 (520)
.. ......|++..+.+++||||+|.+..... .+++.+++.|+-+... .....
T Consensus 198 ~~-----~~~~~~ll~~~~v~~~~~GH~H~~~r~~~---~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (302)
T d1utea_ 198 CL-----VKQLLPLLTTHKVTAYLCGHDHNLQYLQD---ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLG 269 (302)
T ss_dssp HH-----HHHTHHHHHHTTCSEEEECSSSSEEEEEC---TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCC
T ss_pred hh-----hhhhhHHHHhcCceEEEeCCCcceEEEec---CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcc
Confidence 00 12345688888899999999998765433 3567788876544211 01245
Q ss_pred cEEEEEEEcCC
Q 010015 323 SFRLLSASNSA 333 (520)
Q Consensus 323 gf~llsl~~~~ 333 (520)
||.+++++++.
T Consensus 270 gf~~~~v~~~~ 280 (302)
T d1utea_ 270 GFAYVEITPKE 280 (302)
T ss_dssp EEEEEEECSSC
T ss_pred eEEEEEEECCE
Confidence 89999987664
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.72 E-value=8.9e-17 Score=150.47 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=129.8
Q ss_pred CceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHH
Q 010015 49 GYDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRF 128 (520)
Q Consensus 49 ~~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf 128 (520)
++-+|+.+||+|=. + .. +.+.++. +...+||+||++|||++.+. ..+++.. +
T Consensus 4 ~~~~i~~~sd~hg~-----------~-ea---------le~~~~~-~~~~~~D~vv~~GDl~~~~~--~~~~~~~----~ 55 (228)
T d1uf3a_ 4 TVRYILATSNPMGD-----------L-EA---------LEKFVKL-APDTGADAIALIGNLMPKAA--KSRDYAA----F 55 (228)
T ss_dssp CCCEEEEEECCTTC-----------H-HH---------HHHHHTH-HHHHTCSEEEEESCSSCTTC--CHHHHHH----H
T ss_pred cccEEEEEeCCCCC-----------H-HH---------HHHHHHH-HhhcCCCEEEECCCCCCCCc--cchHHHH----h
Confidence 45689999999931 1 01 2233322 23457999999999998773 3344443 4
Q ss_pred HHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-------CcceEEEeCCEEEEEEeCCCCC-CC-
Q 010015 129 KHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-------KRNYRFTVGKVEFIVVDAQTLD-GH- 199 (520)
Q Consensus 129 ~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-------~~ny~~~ig~~~fV~LDS~~l~-g~- 199 (520)
.+.+. ..++|+++|+||||..... .....+..... ...+.+..+++.++.+++.... +.
T Consensus 56 ~~~L~------~~~~pv~~i~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (228)
T d1uf3a_ 56 FRILS------EAHLPTAYVPGPQDAPIWE------YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEP 123 (228)
T ss_dssp HHHHG------GGCSCEEEECCTTSCSHHH------HHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCC
T ss_pred hhhhc------cccceEEEEecCCCchhhh------hhhhhcccccccccccccceeeeeccCCEEEEecCCccccCcCc
Confidence 45554 4678999999999964321 11111221111 1245677789999998764321 11
Q ss_pred ---CCCCCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhccCCCccchhccccCHHHHHHH
Q 010015 200 ---PEGNLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRTGHSQEILYQNYITEESSNRL 276 (520)
Q Consensus 200 ---~~g~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~~~~~g~~yqn~ls~e~s~~L 276 (520)
........+..|+++.+......+.|+++|+|++... ++. ...+....+
T Consensus 124 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~il~~H~p~~~~~---~~~-------------------------~~~~~~~~~ 175 (228)
T d1uf3a_ 124 EEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKG---LNE-------------------------QGSHEVAHL 175 (228)
T ss_dssp BSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBTT---TBT-------------------------TSBHHHHHH
T ss_pred chhhhhhhhHHHHHHHHHHHhhccCCceEEEEeeeccCcc---ccc-------------------------cccHHHHHH
Confidence 1234567888999998887778899999999987531 110 011334567
Q ss_pred HHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 277 LDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 277 L~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
++..++++++|||+|..... . ++...+..||+. ...|.++++...
T Consensus 176 ~~~~~~~lvl~GH~H~~~~~-~----g~~~~v~pG~~~------~g~y~~i~~~~~ 220 (228)
T d1uf3a_ 176 IKTHNPLLVLVAGKGQKHEM-L----GASWVVVPGDLS------EGEYSLLDLRAR 220 (228)
T ss_dssp HHHHCCSEEEECCSSCEEEE-E----TTEEEEECCBGG------GTEEEEEETTTT
T ss_pred HHhcCCcEEEEcccccchhc-c----CCEEEEECCccc------cceEEEEEccCC
Confidence 88889999999999975322 1 455566667654 346888887654
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.71 E-value=1.1e-16 Score=152.21 Aligned_cols=215 Identities=14% Similarity=0.184 Sum_probs=125.1
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHH------
Q 010015 50 YDKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQE------ 123 (520)
Q Consensus 50 ~~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~------ 123 (520)
|.|+++|||+|.. +. . + .+.+. .+...+||+||++|||+|.+.. .+++..
T Consensus 2 ~~ri~~isD~h~~----~~-----~---l---------~~l~~-~~~~~~~D~vli~GDl~~~~~~--~~~~~~~~~~~~ 57 (257)
T d2yvta1 2 PRKVLAIKNFKER----FD-----L---L---------PKLKG-VIAEKQPDILVVVGNILKNEAL--EKEYERAHLARR 57 (257)
T ss_dssp CCEEEEEECCTTC----GG-----G---H---------HHHHH-HHHHHCCSEEEEESCCCCCHHH--HHHHHHHHHTTC
T ss_pred CcEEEEEeCCCCC----HH-----H---H---------HHHHH-HHhhcCCCEEEEecccCCCCCC--CHHHHHHHHhhh
Confidence 5899999999941 11 1 1 12221 2234589999999999997621 111211
Q ss_pred ----------------HHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC-------CcceE
Q 010015 124 ----------------SLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG-------KRNYR 180 (520)
Q Consensus 124 ----------------~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg-------~~ny~ 180 (520)
.+..+.+.+. ..++|++++|||||..... .....+..... .....
T Consensus 58 ~~~~~~~~~~~n~d~~~~~~~~~~L~------~~~~pv~~i~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 125 (257)
T d2yvta1 58 EPNRKVIHENEHYIIETLDKFFREIG------ELGVKTFVVPGKNDAPLKI------FLRAAYEAETAYPNIRVLHEGFA 125 (257)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHH------TTCSEEEEECCTTSCCHHH------HHHHHHHTTTTCTTEEECSSEEE
T ss_pred hhceeeeccccccchhhHHHHHHHHH------hcCCcEEEEeCCCcchhhH------HHHHhccccccccccccccceeE
Confidence 1222323332 4678999999999964321 11222222111 12234
Q ss_pred EEeCCEEEEEEeCCCCCCCC--CC--CCCHHHHHHHHHhhccCCCCCeEEEEccCCCCCCCCCCCCCCCCcccchhhhcc
Q 010015 181 FTVGKVEFIVVDAQTLDGHP--EG--NLAAATWDFVKNVSIDFQLLPRVLLTHIPLYRRDETPCGPHRSSPIINQRIVRT 256 (520)
Q Consensus 181 ~~ig~~~fV~LDS~~l~g~~--~g--~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~~~~~~~~ 256 (520)
...++..|+++++....... .. ...+.+..+++..+...+..++|+++|+|++.... +. .+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~pp~~~~~---~~---~~~-------- 191 (257)
T d2yvta1 126 GWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFV---DR---TPE-------- 191 (257)
T ss_dssp EETTTEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSST---TC---BTT--------
T ss_pred EecCCeEEEEeccccCCccccchhhhhhhhhHHHHHHHHhhhcccccEEEEEccccccccc---cc---ccc--------
Confidence 55578889888764322221 11 12344455666666667788999999999976321 10 000
Q ss_pred CCCccchhccccCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 257 GHSQEILYQNYITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 257 ~~~~g~~yqn~ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
.......+....+++..+++++++||+|..... . ++...+..||++ ..+|.++++.+.
T Consensus 192 -------~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~-~----g~~~~~~pGs~~------~g~y~~id~~~~ 249 (257)
T d2yvta1 192 -------DPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL-V----GNTIVVNPGEFE------EGRYAFLDLTQH 249 (257)
T ss_dssp -------BSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE-E----TTEEEEECCBGG------GTEEEEEETTTT
T ss_pred -------chhhhhhHHHHHhhhhcCCcEEEEEeecCCeEe-c----CCeEEEECCccc------cCEEEEEEEeCC
Confidence 000122244567788889999999999985321 1 567777777754 347888888654
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.28 E-value=3.9e-11 Score=111.48 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=44.7
Q ss_pred HHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeec----CCCCCCcEEEEEEEcCC
Q 010015 273 SNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ----QGNLYPSFRLLSASNSA 333 (520)
Q Consensus 273 s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~----~g~~~Pgf~llsl~~~~ 333 (520)
..+++...+.+++++||+|....... ++...++.||++.. .+...|+|.++++..+.
T Consensus 111 l~~~~~~~~~dvvi~GHTH~~~~~~~----~g~~~iNPGSvg~pr~~~~~~~~~syaild~~~~~ 171 (193)
T d2a22a1 111 LEQWQRRLDCDILVTGHTHKLRVFEK----NGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNK 171 (193)
T ss_dssp HHHHHHHHTCSEEEECSSCCCEEEEE----TTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTE
T ss_pred HHHHHhhcCCCEEEEcCccCceEEEE----CCEEEEECCCCCcCcCCCCCCCCCEEEEEEEECCE
Confidence 45567777889999999999866554 68899999999743 34457899999998764
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.25 E-value=1.2e-10 Score=107.24 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=42.9
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecC-C---CCCCcEEEEEEEcCC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQ-G---NLYPSFRLLSASNSA 333 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~-g---~~~Pgf~llsl~~~~ 333 (520)
..+.+..+.+++++||+|....... ++...++-||.+... | ...|+|.++++..+.
T Consensus 100 ~~~~~~~~~divi~GHTH~p~~~~~----~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~~~ 159 (182)
T d1z2wa1 100 ALLQRQFDVDILISGHTHKFEAFEH----ENKFYINPGSATGAYNALETNIIPSFVLMDIQAST 159 (182)
T ss_dssp HHHHHHHSSSEEECCSSCCCEEEEE----TTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTE
T ss_pred HHHHhccCCCEEEECCcCcceEEEE----CCEEEEeCCCCCCCCCCCCCCCCCEEEEEEEeCCE
Confidence 4456666789999999999865544 688999999987432 2 446899999998763
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.20 E-value=1e-10 Score=110.28 Aligned_cols=175 Identities=11% Similarity=0.068 Sum_probs=93.9
Q ss_pred CCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCCCceEEEccCCCCCCcccccCCCHHHHHHHHHHhC
Q 010015 96 LPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIFGLKSQDRFRDIRVHFLPGNHDNGYAALLSHKPEIVRRYEKEFG 175 (520)
Q Consensus 96 ~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if~~~~~~~~~~iPv~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg 175 (520)
...++|.||++||++|.|+. ..+ .++.+.++.. +.++++|+||||..... +...+.
T Consensus 29 ~~~~~D~ii~~GDlvd~G~~--~~e---vi~~l~~l~~--------~~~v~~v~GNHD~~~~~-----------~~~~~~ 84 (251)
T d1nnwa_ 29 EGYEIEKYYILGNIVGLFPY--PKE---VIEVIKDLTK--------KENVKIIRGKYDQIIAM-----------SDPHAT 84 (251)
T ss_dssp TTCCEEEEEEESCSSSSSSC--HHH---HHHHHHHHHH--------HSCEEEECCHHHHHHHH-----------SCTTCS
T ss_pred cCCCCcEEEEecCcCCCCCC--cHH---HHHHHHHHhh--------cCCEEEEeccHHHHHHh-----------cccccc
Confidence 45678999999999998853 233 3444554432 23688999999932110 000000
Q ss_pred Ccc---eEEEeCCEEEEEEeCCCCCCCCCCCCCHHHHHHHHHhhcc---CCCCCeEEEEccCCCCCCCCCCCCCCCCccc
Q 010015 176 KRN---YRFTVGKVEFIVVDAQTLDGHPEGNLAAATWDFVKNVSID---FQLLPRVLLTHIPLYRRDETPCGPHRSSPII 249 (520)
Q Consensus 176 ~~n---y~~~ig~~~fV~LDS~~l~g~~~g~i~~~ql~wL~~ll~~---~~~~p~ILltH~PL~~~~~~~Cg~~r~~~~~ 249 (520)
... .....+. ... .. ......+..+.++|++++... ....+.++++|.++....... ..+
T Consensus 85 ~~~~~~~~~~~~~-----~~~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~~~~~~-----~~~-- 150 (251)
T d1nnwa_ 85 DPGYIDKLELPGH-----VKK-AL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGE-----VLA-- 150 (251)
T ss_dssp SSGGGGGSSCCHH-----HHH-HH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCC-----CCS--
T ss_pred ccchhhhhccchh-----HHH-hh-HHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCccCcccch-----hhh--
Confidence 000 0000000 000 00 000012345566777764321 225678999999876542210 000
Q ss_pred chhhhccCCCccchhccccCHHHHHHHHHHhC-CcEEEECCccCCCcEEeccCCCCeEEEEeCceeec-CCCCCCcEEEE
Q 010015 250 NQRIVRTGHSQEILYQNYITEESSNRLLDLIK-PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ-QGNLYPSFRLL 327 (520)
Q Consensus 250 ~~~~~~~~~~~g~~yqn~ls~e~s~~LL~~l~-p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~-~g~~~Pgf~ll 327 (520)
..........+...+ .+++++||+|....... ++...+..||+++. .|...++|.++
T Consensus 151 -----------------~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~~----~~~~~in~Gsvg~~~~g~~~~~y~i~ 209 (251)
T d1nnwa_ 151 -----------------EQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT----RYGRVVCPGSVGFPPGKEHKATFALV 209 (251)
T ss_dssp -----------------SCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE----TTEEEEEECCSSSCSSSSCCEEEEEE
T ss_pred -----------------hhHHHHHhhhcccccCceEEEEeccceEEEEEe----eeeeccccccccccCCCCCCCeEEEE
Confidence 011122333444444 48999999998766655 67889999999865 35556789888
Q ss_pred EE
Q 010015 328 SA 329 (520)
Q Consensus 328 sl 329 (520)
..
T Consensus 210 d~ 211 (251)
T d1nnwa_ 210 DV 211 (251)
T ss_dssp ET
T ss_pred Ec
Confidence 75
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.19 E-value=8.8e-12 Score=122.31 Aligned_cols=90 Identities=21% Similarity=0.198 Sum_probs=53.7
Q ss_pred eEEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHH
Q 010015 51 DKVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKH 130 (520)
Q Consensus 51 ~rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~ 130 (520)
+|++++||+||+...... ..+..... ..+.+.+..+ ...+||+||++||++|.+.. +.+......+.+..
T Consensus 1 Mkilh~SDlHlG~~~~~~------~~~~~~~~--~~l~~iv~~a-~~~~~D~vli~GDlfd~~~~-~~~~~~~~~~~~~~ 70 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK------PQREEEFA--EAFKNALEIA-VQENVDFILIAGDLFHSSRP-SPGTLKKAIALLQI 70 (333)
T ss_dssp CEEEEECCCCBTCCGGGC------HHHHHHHH--HHHHHHHHHH-HHTTCSEEEEESCSBSSSSC-CHHHHHHHHHHHHH
T ss_pred CEEEEEecCcCCCCCcCc------hhHHHHHH--HHHHHHHHHH-HHcCCCEEEECCCCCCCCCC-CHHHHHHHHHHHhh
Confidence 589999999997532210 01111111 1234444333 45689999999999997642 33333332232332
Q ss_pred HhccccCCCCCCceEEEccCCCCCCcc
Q 010015 131 IFGLKSQDRFRDIRVHFLPGNHDNGYA 157 (520)
Q Consensus 131 if~~~~~~~~~~iPv~~vpGNHDig~~ 157 (520)
+ . ..++|+++++||||....
T Consensus 71 l-~------~~~i~v~~i~GNHD~~~~ 90 (333)
T d1ii7a_ 71 P-K------EHSIPVFAIEGNHDRTQR 90 (333)
T ss_dssp H-H------TTTCCEEEECCTTTCCSS
T ss_pred H-H------hcCCcEEEeCCCCccccc
Confidence 2 2 367999999999997543
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.14 E-value=3.7e-10 Score=101.72 Aligned_cols=54 Identities=13% Similarity=0.116 Sum_probs=41.6
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEEEcC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSASNS 332 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~ 332 (520)
+.+++..+++++++||+|....... ++...++.||++...+ ..|+|.++.+.+.
T Consensus 105 ~~~~~~~~~d~v~~GHtH~~~~~~~----~~~~~iNPGSvg~p~~-~~~s~~ild~~~~ 158 (165)
T d1s3la_ 105 EMAIKSGLYDVVIYGHTHERVFEEV----DDVLVINPGECCGYLT-GIPTIGILDTEKK 158 (165)
T ss_dssp HHHHHHSCCSEEEEECSSCCEEEEE----TTEEEEECCCSSCTTT-SCCEEEEEETTTT
T ss_pred HHHhhcCCCCEEEECCcCcceEEEE----CCEEEEECCCCCCCCC-CCCEEEEEEccCC
Confidence 4566677789999999999765443 6889999999986544 3689999987554
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.95 E-value=1.7e-09 Score=98.19 Aligned_cols=44 Identities=20% Similarity=0.307 Sum_probs=35.3
Q ss_pred CcEEEECCccCCCcEEeccCCCCeEEEEeCceeecCCCCCCcEEEEEE
Q 010015 282 PVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQQGNLYPSFRLLSA 329 (520)
Q Consensus 282 p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~~g~~~Pgf~llsl 329 (520)
++++++||+|....... +++..++.||+++..+...++|.+++.
T Consensus 120 ~d~vv~GHtH~p~~~~~----~~~~~iNpGS~~~pr~~~~~sy~il~~ 163 (184)
T d1su1a_ 120 NDVLVYGHTHLPVAEQR----GEIFHFNPGSVSIPKGGNPASYGMLDN 163 (184)
T ss_dssp TCEEECCSSCCCEEEEE----TTEEEEECCCSSCCCTTCCCEEEEEET
T ss_pred CCEEEECCccceeEEEE----CCEEEEECCCCCCCCCCCCCEEEEEEC
Confidence 58999999998765544 789999999999765555688998863
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.92 E-value=2.1e-08 Score=91.01 Aligned_cols=55 Identities=16% Similarity=0.049 Sum_probs=43.3
Q ss_pred HHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCceeec-CCCCCCcEEEEEEEcC
Q 010015 274 NRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTISWQ-QGNLYPSFRLLSASNS 332 (520)
Q Consensus 274 ~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S~~-~g~~~Pgf~llsl~~~ 332 (520)
..+....+.++|++||+|....... +++..++.||++.. .+...|+|.++++.+.
T Consensus 95 ~~~~~~~~~dvvi~GHTH~p~~~~~----~~~~~iNPGSvg~pr~~~~~~syail~~~~~ 150 (173)
T d3ck2a1 95 DYWAQEEEAAICLYGHLHVPSAWLE----GKILFLNPGSISQPRGTIRECLYARVEIDDS 150 (173)
T ss_dssp HHHHHHTTCSEEECCSSCCEEEEEE----TTEEEEEECCSSSCCTTCCSCCEEEEEECSS
T ss_pred HHHHHhcCCCEEEeCCcCcceEEEE----CCEEEEECCCCCCCCCCCCCCEEEEEEEeCC
Confidence 3455566789999999999766554 68999999999854 4556789999998765
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.66 E-value=4.6e-08 Score=90.03 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=42.1
Q ss_pred EEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHHh
Q 010015 53 VAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHIF 132 (520)
Q Consensus 53 ilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~if 132 (520)
+.++||+|++...-...++ +. ..+. .+..+.+.|...+ .+.|.|+++||++.... ..+++.+ ++
T Consensus 4 i~fiSD~Hfgh~~i~~~r~--f~-~~~~--~~~~ii~~wn~~V--~~~D~v~~LGD~~~~~~--~~~~~~~-------~l 67 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNP--EV-RFKG--FEIVILTNLLKVL--KPEDTLYHLGDFTWHFN--DKNEYLR-------IW 67 (188)
T ss_dssp EEEEBCCCBTCTTHHHHST--TT-CCTT--HHHHHHHHHHTTC--CTTCEEEECSCCBSCSC--CTTSHHH-------HH
T ss_pred EEEEeCcCCCCcchhhcCC--CC-CHHH--HHHHHHHHHHhhc--CCCCEEEEeCCccccCC--CHHHHHH-------HH
Confidence 5689999997432100000 00 0001 1233444554333 46799999999986432 1222222 22
Q ss_pred ccccCCCCCCceEEEccCCCCC
Q 010015 133 GLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 133 ~~~~~~~~~~iPv~~vpGNHDi 154 (520)
. .++...+.|.||||.
T Consensus 68 ~------~L~g~~~lI~GNHD~ 83 (188)
T d1xm7a_ 68 K------ALPGRKILVMGNHDK 83 (188)
T ss_dssp H------HSSSEEEEECCTTCC
T ss_pred H------HCCCceEEEecCCCc
Confidence 2 133467899999995
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=1.6e-05 Score=79.03 Aligned_cols=83 Identities=16% Similarity=0.111 Sum_probs=43.5
Q ss_pred EEccCCCCCCcccccCCCHHHHHHHHHHhCC------------------cceEEEeCCEEE--EEEeCCCCCC--CC---
Q 010015 146 HFLPGNHDNGYAALLSHKPEIVRRYEKEFGK------------------RNYRFTVGKVEF--IVVDAQTLDG--HP--- 200 (520)
Q Consensus 146 ~~vpGNHDig~~~~~~~~~~~~~rf~~~Fg~------------------~ny~~~ig~~~f--V~LDS~~l~g--~~--- 200 (520)
..++||||+.++. +.+.++.+.... .+..++.+++++ |++-+..... .+
T Consensus 86 a~~~GNHEfd~G~------~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~ 159 (337)
T d1usha2 86 AMAIGNHEFDNPL------TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYF 159 (337)
T ss_dssp EEECCGGGGSSCH------HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCC
T ss_pred EEEechhhhccch------HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcccc
Confidence 4668999987652 334444443321 123467788765 6664322111 11
Q ss_pred CC----CCCHHHHHHHHHhhccCCCCCeEEEEccCCCC
Q 010015 201 EG----NLAAATWDFVKNVSIDFQLLPRVLLTHIPLYR 234 (520)
Q Consensus 201 ~g----~i~~~ql~wL~~ll~~~~~~p~ILltH~PL~~ 234 (520)
.+ ...+...++++++.......-+|+++|.+...
T Consensus 160 ~~~~~~d~~~~~~~~~~~l~~~~~~D~iI~lsH~G~~~ 197 (337)
T d1usha2 160 TDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYD 197 (337)
T ss_dssp TTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCG
T ss_pred cCcccccHHHHHHHHHHHHhhccCCCEEEEecccCccc
Confidence 11 11133345556554333344589999998765
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.73 E-value=9.7e-05 Score=72.68 Aligned_cols=12 Identities=8% Similarity=-0.031 Sum_probs=10.9
Q ss_pred CceEEEEEeCCC
Q 010015 49 GYDKVAVIADPQ 60 (520)
Q Consensus 49 ~~~rilvISDpH 60 (520)
..++|++.+|+|
T Consensus 10 ~~l~iLhtnD~H 21 (322)
T d3c9fa2 10 NDINFVHTTDTH 21 (322)
T ss_dssp CSEEEEEECCCT
T ss_pred CEEEEEEEeccc
Confidence 469999999999
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.86 E-value=0.00042 Score=63.28 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=41.6
Q ss_pred EEEEEeCCCCCCCCCCCCCCchhHHHHHHHhhHHHHHHHHHHhhCCCCCCEEEEcCCcCCCCCCCCHHHHHHHHHHHHHH
Q 010015 52 KVAVIADPQIMDKTSLHLPPKSLALEVAQFFTDLYMRRAFFASILPFKPDVILFLGDHFDGGPYLSDEEWQESLNRFKHI 131 (520)
Q Consensus 52 rilvISDpHL~~~~~~~~~~~~l~~~l~~~~~d~~l~r~~~~~~~~~~PD~VI~lGDL~d~G~~~s~~e~~~~~~Rf~~i 131 (520)
||.+|+|+|= .+ + .|.+.+..+......|.++++||++|.|+.. .+ ..+.
T Consensus 14 rI~vIgDIHG----~~-----------~------~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s--~~-------vl~~ 63 (219)
T d1g5ba_ 14 NIWVVGDLHG----CY-----------T------NLMNKLDTIGFDNKKDLLISVGDLVDRGAEN--VE-------CLEL 63 (219)
T ss_dssp CEEEECCCTT----CH-----------H------HHHHHHHHHTCCTTTCEEEECSCCSSSSSCH--HH-------HHGG
T ss_pred eEEEEEeccc----CH-----------H------HHHHHHHHcCCCCCCCEEEEeCCccccCccH--HH-------HHHH
Confidence 7999999992 11 1 1345554443345679999999999999531 11 1122
Q ss_pred hccccCCCCCCceEEEccCCCCC
Q 010015 132 FGLKSQDRFRDIRVHFLPGNHDN 154 (520)
Q Consensus 132 f~~~~~~~~~~iPv~~vpGNHDi 154 (520)
+. +..+..|.||||.
T Consensus 64 l~--------~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 64 IT--------FPWFRAVRGNHEQ 78 (219)
T ss_dssp GG--------STTEEECCCHHHH
T ss_pred hh--------ccccccccCcHHH
Confidence 22 2247899999994
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.55 E-value=0.0033 Score=60.70 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=14.2
Q ss_pred HHHHhC-CcEEEECCccCCCc
Q 010015 276 LLDLIK-PVLVLSGHDHDQCT 295 (520)
Q Consensus 276 LL~~l~-p~lVfsGH~H~~c~ 295 (520)
|.+.+. .+++++||.|..+.
T Consensus 197 la~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 197 LARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHhcCCCeeeeecCccceeec
Confidence 444443 48999999998664
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.84 E-value=1.4 Score=44.25 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=51.6
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCC---CCeEEEEeCceeecCCCCCCcEEEEEEEcCCcccCCcccccE
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNH---EHIKEHTVGTISWQQGNLYPSFRLLSASNSALLNMSNLEEAV 344 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~---~~i~Eitv~S~S~~~g~~~Pgf~llsl~~~~~~~~~~~~~~~ 344 (520)
.+.++..++++..+-.+|+-||-=...-+...... +.-.-+||=|.+--.|..+-.=.++.+.++.. ...+...
T Consensus 247 FG~~a~~~FL~~n~L~~IIR~HE~~~~Gy~~~~~~~~~~~~~viTVFSApnYc~~~nN~aavl~~~~~~~---~i~qf~~ 323 (473)
T d1auia_ 247 YSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM---NIRQFNC 323 (473)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETTEE---EEEEECC
T ss_pred EChHHHHHHHHHcCCcEEEEcCcchhhhhhhhcCCccCCCCCEEEEcCCCCcCCCcCCeeEEEeecCCCc---ceEEecC
Confidence 46788999999999999999998755444432111 11236777776511121112223344454421 1112223
Q ss_pred EEeEEeccccceeehhhHHHH
Q 010015 345 LTRLCFLPMQTHIYIGYLLLF 365 (520)
Q Consensus 345 ~t~~C~LP~q~~~~~~Y~~~~ 365 (520)
..+.+.||+-.-+|.|=.+++
T Consensus 324 ~~hp~~~p~~~d~f~ws~p~~ 344 (473)
T d1auia_ 324 SPHPYWLPNFMDVFTWSLPFV 344 (473)
T ss_dssp CCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCccccccccchhhhhHHHH
Confidence 346678888555555544433
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.94 E-value=0.26 Score=47.44 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=29.3
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCC--CcEEeccCCCCeEEEEeCcee
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQ--CTVSHESNHEHIKEHTVGTIS 314 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~--c~~~h~~~~~~i~Eitv~S~S 314 (520)
..+++.+++++..+-++|+-||-=.. ....|. + +-+|+=|.+
T Consensus 231 FG~~~~~~Fl~~n~l~lIIR~He~v~~G~~~~~~---~--kviTvFSa~ 274 (324)
T d1s95a_ 231 FGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHG---G--RCVTVFSAP 274 (324)
T ss_dssp ECHHHHHHHHHHHTCCEEEECCSCCTTSEEEEGG---G--TEEEECCCS
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccccCceEEecC---C--cEEEEeCCC
Confidence 46788999999999999999997432 233332 2 457776655
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=88.22 E-value=0.6 Score=44.19 Aligned_cols=60 Identities=12% Similarity=0.039 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCCcEEeccCCCCeEEEEeCcee---ecCCCCCCcEEEEEEEcCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQCTVSHESNHEHIKEHTVGTIS---WQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c~~~h~~~~~~i~Eitv~S~S---~~~g~~~Pgf~llsl~~~~ 333 (520)
..+++.+++++..+-++++-||--...-+.... +-+-+|+=|.+ -.++| -| .++.++.+.
T Consensus 222 fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~---~~~viTiFSa~nY~~~~~N--~g-ail~i~~~~ 284 (294)
T d1jk7a_ 222 FGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFA---KRQLVTLFSAPNYCGEFDN--AG-AMMSVDETL 284 (294)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEEET---TTTEEEEBCCTTGGGTCCC--CE-EEEEECTTS
T ss_pred cCHHHHHHHHHHCCCCEEEEcCccccCCcEEec---CCcEEEEecCCCcCCCCCc--cE-EEEEECCCC
Confidence 467888999999999999999875433332221 12356666654 22333 22 456665553
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.59 E-value=0.71 Score=43.50 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHhCCcEEEECCccCCC--cEEeccCCCCeEEEEeCcee---ecCCCCCCcEEEEEEEcCC
Q 010015 268 ITEESSNRLLDLIKPVLVLSGHDHDQC--TVSHESNHEHIKEHTVGTIS---WQQGNLYPSFRLLSASNSA 333 (520)
Q Consensus 268 ls~e~s~~LL~~l~p~lVfsGH~H~~c--~~~h~~~~~~i~Eitv~S~S---~~~g~~~Pgf~llsl~~~~ 333 (520)
..+++.+++++..+-++++-||.=... ...|. + +-+|+=|.+ -.++| -| .++.++.+.
T Consensus 215 fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~---~--kviTiFSa~~Y~~~~~N--~~-a~l~i~~~~ 277 (288)
T d3c5wc1 215 FGQDISETFNHANGLTLVSRAHQLVMEGYNWCHD---R--NVVTIFSAPNYCYRCGN--QA-AIMELDDTL 277 (288)
T ss_dssp ECHHHHHHHHHHTTCSEEEECCSCCTTSEEEEGG---G--TEEEEBCCTTGGGTSCC--CE-EEEEECTTC
T ss_pred cCHHHHHHHHHHCCCcEEEcCCCcCCCCCeecCC---C--cEEEEecCCCccCCCCc--ce-EEEEECCCC
Confidence 466788999999999999999863322 23332 2 346665544 23333 23 455565553
|