Citrus Sinensis ID: 010044

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52

MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

cccHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccHHHHHHHHHHccccccEEEEEccccccHHHHHHccccccccEEEEEcccEEEcccccccccccccHHHHHHHHHcccccccccccEEEEcccccHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHccccHHHHHccEEEEccccccccccccccccccccccccccccccHHHHHHHccccEEEEcccccccccHHHHHHHHHcccccEEEEcccccccccccHHHHHHcccccEEEEEccccccEEEccEEEcccccccEEEccHHHHHHHHHccEEEccHHHHcc

cccHHHHHcccccHccccccccccccccccccccccccccccccEEEEcccccHHHHccccccHHHccHHHHHHcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHcccHHHHHHHcHHHHccccccEEEEHHHcccHHHHHcccccccccEEEEEccccEcccEccHHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEcccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHcccccHHHHHHcHEEEEccccEEcEcccccccHHHccccEcccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHccccHHHHHHccccccEEEEccccccEEEccEEEccEEccHHHcHHHHHHHHHHHcEccccHHHHHHH

mestmkemrdgasvldfdskstveggvedvygedratedqlvtpwtisvasgycllrdprhnkglaftekeRDAHylrgllppaviSQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEEllpvvytptvgeACQKYgsifrrpqglyisLKEKGKILEVLKNWPERSIQVIVVTdgerilglgdlgcqgmgipvGKLALYTAlggirpsaclpitvdvgtnneqllkDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGtthlvfnddiqgTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISkqtkapveETRKKIclvdskglivsSRKDSlqhfkkpwahehepvnnlldavkvikptiligssgvgrtFTKEVIEAMASFnekplilalsnptsqsectaeeayTWSKgraifasgspfdpfeyngkvfvpgqannayifpgFGLGLVISGAIRVhddmllaa

mestmkemrdgasvldfdskstveggvedvygedratedqlvtpwTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVlknwpersiQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEIskqtkapveetrkkiclvdskglivSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPtiligssgvgrTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQgtasvvlagvvaalkliggTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

****************************DVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS*******CTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDML***

**************************************DQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

***********ASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS************AYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

*************************G**D*YGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		519	2.2.26 [Sep-21-2011]
P34105		591	NADP-dependent malic enzy	yes	no	0.992	0.871	0.885	0.0
P51615		591	NADP-dependent malic enzy	yes	no	1.0	0.878	0.878	0.0
P36444		647	NADP-dependent malic enzy	N/A	no	0.974	0.782	0.831	0.0
P12628		589	NADP-dependent malic enzy	N/A	no	0.946	0.833	0.855	0.0
Q9CA83		646	NADP-dependent malic enzy	yes	no	0.976	0.784	0.814	0.0
O82191		581	NADP-dependent malic enzy	no	no	0.967	0.864	0.836	0.0
P43279		639	NADP-dependent malic enzy	no	no	0.944	0.766	0.830	0.0
P22178		648	NADP-dependent malic enzy	N/A	no	0.961	0.770	0.812	0.0
P37222		573	NADP-dependent malic enzy	N/A	no	0.961	0.870	0.818	0.0
P37223		585	NADP-dependent malic enzy	N/A	no	0.980	0.870	0.783	0.0

>sp\|P34105\|MAOX_POPTR NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3	Back alignment and function desciption

 Score =  967 bits (2501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/515 (88%), Positives = 494/515 (95%)

Query: 1   MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPR 60
           MEST+KEMRDGASVLD D KSTV GGVEDVYGEDRATEDQLVTPWTISVASGY LLRDP 
Sbjct: 1   MESTLKEMRDGASVLDMDPKSTVGGGVEDVYGEDRATEDQLVTPWTISVASGYTLLRDPH 60

Query: 61  HNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNE 120
           HNKGLAFTEKERDAHYLRGLLPP  ISQQLQEKKLMN+IRQY++PLQKY AMMELEERNE
Sbjct: 61  HNKGLAFTEKERDAHYLRGLLPPTTISQQLQEKKLMNTIRQYQLPLQKYTAMMELEERNE 120

Query: 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER 180
           RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIF+RPQGLYISLKEKGK+L+VLKNWP++
Sbjct: 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKVLDVLKNWPQK 180

Query: 181 SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLL 240
           SIQVIVVTDGERILGLGDLGCQG+GIPVGKL+LYTALGG+RPSACLP+T+DVGTNNEQLL
Sbjct: 181 SIQVIVVTDGERILGLGDLGCQGIGIPVGKLSLYTALGGVRPSACLPVTIDVGTNNEQLL 240

Query: 241 KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH 300
           KDEFYIGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAF+LLAKYGTTH
Sbjct: 241 KDEFYIGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTH 300

Query: 301 LVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 360
           LVFNDDIQGTA+VVLAG+++ALKL+GG+LA+H FLFLGAGEAGTGIAELIALE+S+++K 
Sbjct: 301 LVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTGIAELIALEMSRRSKT 360

Query: 361 PVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG 420
           P+EETRKKI L DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SG
Sbjct: 361 PLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSG 420

Query: 421 VGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 480
           VG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY
Sbjct: 421 VGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEY 480

Query: 481 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDM 515
            GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDM
Sbjct: 481 EGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDM 515

Populus trichocarpa (taxid: 3694)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0

>sp\|P51615\|MAOX_VITVI NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1	Back alignment and function description

>sp\|P36444\|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1	Back alignment and function description

>sp\|P12628\|MAOX_PHAVU NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1	Back alignment and function description

>sp\|Q9CA83\|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic OS=Arabidopsis thaliana GN=NADP-ME4 PE=1 SV=1	Back alignment and function description

>sp\|O82191\|MAOP1_ARATH NADP-dependent malic enzyme 1 OS=Arabidopsis thaliana GN=NADP-ME1 PE=1 SV=1	Back alignment and function description

>sp\|P43279\|MAOC_ORYSJ NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2	Back alignment and function description

>sp\|P22178\|MAOC_FLATR NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1	Back alignment and function description

>sp\|P37222\|MAOC_SOLLC NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1	Back alignment and function description

>sp\|P37223\|MAOX_MESCR NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		519
255546341		591	malic enzyme, putative [Ricinus communis	1.0	0.878	0.907	0.0
356513167		633	PREDICTED: NADP-dependent malic enzyme-l	1.0	0.819	0.897	0.0
224142207		591	predicted protein [Populus trichocarpa]	0.992	0.871	0.889	0.0
1346485		591	RecName: Full=NADP-dependent malic enzym	0.992	0.871	0.885	0.0
449435772		591	PREDICTED: NADP-dependent malic enzyme-l	0.992	0.871	0.887	0.0
225445108		591	PREDICTED: NADP-dependent malic enzyme [	1.0	0.878	0.882	0.0
1708924		591	RecName: Full=NADP-dependent malic enzym	1.0	0.878	0.878	0.0
228412		589	malic enzyme	0.988	0.870	0.887	0.0
1561774		640	malate dehydrogenase [Vitis vinifera]	1.0	0.810	0.865	0.0
225442481		640	PREDICTED: NADP-dependent malic enzyme [	1.0	0.810	0.865	0.0

>gi\|255546341\|ref\|XP_002514230.1\| malic enzyme, putative [Ricinus communis] gi\|223546686\|gb\|EEF48184.1\| malic enzyme, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  986 bits (2550), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/519 (90%), Positives = 499/519 (96%)

Query: 1   MESTMKEMRDGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPR 60
           MESTMKEMR GASVLD D KSTV GGVEDVYGED ATEDQLVTPWT SVASGY LLRDPR
Sbjct: 1   MESTMKEMRGGASVLDMDPKSTVGGGVEDVYGEDCATEDQLVTPWTTSVASGYSLLRDPR 60

Query: 61  HNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNE 120
           HNKGLAF+EKERDAHYLRGLLPP V +QQLQEKKLM++IRQY++PLQKY+AMMELEERNE
Sbjct: 61  HNKGLAFSEKERDAHYLRGLLPPVVATQQLQEKKLMHTIRQYQLPLQKYMAMMELEERNE 120

Query: 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER 180
           RLFYKLLIDNVEELLP+VYTPTVGEACQKYGSIF+RPQGLYISLKEKGKIL+VLKNWPER
Sbjct: 121 RLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGKILDVLKNWPER 180

Query: 181 SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLL 240
           SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGG+RPSACLPIT+DVGTNNE+LL
Sbjct: 181 SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEKLL 240

Query: 241 KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH 300
            DEFYIGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH
Sbjct: 241 NDEFYIGLRQRRATGQEYSELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH 300

Query: 301 LVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 360
           LVFNDDIQGTASVVLAGV+AALKL+GG+L++H FLFLGAGEAGTGIAELIALE+SK+T A
Sbjct: 301 LVFNDDIQGTASVVLAGVIAALKLLGGSLSDHTFLFLGAGEAGTGIAELIALEMSKRTNA 360

Query: 361 PVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG 420
           P+EETRKKI LVDSKGLIVSSRKDSLQHFK+PWAHEHEPV NLLDAVK IKPT+LIGSSG
Sbjct: 361 PLEETRKKIWLVDSKGLIVSSRKDSLQHFKQPWAHEHEPVKNLLDAVKAIKPTVLIGSSG 420

Query: 421 VGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY 480
           VGRTFTKEVIEAMAS NEKPLIL+LSNPTSQSECTAEEAYTW+KG+A FASGSPFDP EY
Sbjct: 421 VGRTFTKEVIEAMASLNEKPLILSLSNPTSQSECTAEEAYTWTKGKATFASGSPFDPVEY 480

Query: 481 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519
            GKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA
Sbjct: 481 EGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356513167\|ref\|XP_003525285.1\| PREDICTED: NADP-dependent malic enzyme-like [Glycine max]	Back alignment and taxonomy information

>gi\|224142207\|ref\|XP_002324450.1\| predicted protein [Populus trichocarpa] gi\|222865884\|gb\|EEF03015.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|1346485\|sp\|P34105.3\|MAOX_POPTR RecName: Full=NADP-dependent malic enzyme; Short=NADP-ME gi\|20469\|emb\|CAA39690.1\| malic enzyme [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449435772\|ref\|XP_004135668.1\| PREDICTED: NADP-dependent malic enzyme-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225445108\|ref\|XP_002283751.1\| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera] gi\|297738764\|emb\|CBI28009.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|1708924\|sp\|P51615.1\|MAOX_VITVI RecName: Full=NADP-dependent malic enzyme; Short=NADP-ME gi\|515759\|gb\|AAA67087.1\| malate dehydrogenase (NADP+) [Vitis vinifera]	Back alignment and taxonomy information

>gi\|228412\|prf\|\|1803524A malic enzyme	Back alignment and taxonomy information

>gi\|1561774\|gb\|AAB08874.1\| malate dehydrogenase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225442481\|ref\|XP_002283814.1\| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera] gi\|297743201\|emb\|CBI36068.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		519
TAIR\|locus:2052045		581	NADP-ME1 "NADP-malic enzyme 1"	0.974	0.870	0.812	5.2e-223
TAIR\|locus:2017854		646	NADP-ME4 "NADP-malic enzyme 4"	0.976	0.784	0.786	2.6e-221
TAIR\|locus:2181980		588	NADP-ME2 "NADP-malic enzyme 2"	0.967	0.853	0.786	1.3e-217
TAIR\|locus:2180547		588	NADP-ME3 "NADP-malic enzyme 3"	0.965	0.852	0.782	4e-216
UNIPROTKB\|F1P0Y6		576	ME1 "Malic enzyme" [Gallus gal	0.909	0.819	0.526	2.7e-132
MGI\|MGI:97043		572	Me1 "malic enzyme 1, NADP(+)-d	0.894	0.811	0.535	1.3e-130
RGD\|3074		572	Me1 "malic enzyme 1, NADP(+)-d	0.894	0.811	0.533	1.7e-130
UNIPROTKB\|P13697		572	Me1 "NADP-dependent malic enzy	0.894	0.811	0.533	1.7e-130
ZFIN\|ZDB-GENE-040801-147		581	me2 "malic enzyme 2, NAD(+)-de	0.911	0.814	0.508	7.3e-130
UNIPROTKB\|P48163		572	ME1 "NADP-dependent malic enzy	0.894	0.811	0.526	5.2e-129

TAIR\|locus:2052045 NADP-ME1 "NADP-malic enzyme 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2153 (763.0 bits), Expect = 5.2e-223, P = 5.2e-223
 Identities = 411/506 (81%), Positives = 454/506 (89%)

Query:    14 VLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERD 73
             V + D KS+V+GGV DVYGED AT +  +TPW++SV+SGY LLRDPR+NKGLAFTEKERD
Sbjct:     4 VTNSDLKSSVDGGVVDVYGEDSATIEHNITPWSLSVSSGYSLLRDPRYNKGLAFTEKERD 63

Query:    74 AHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEE 133
              HYLRGLLPP V+ Q+LQEK+L+N+IRQY+ PLQKY+A+ EL+ERNERLFYKLLIDNVEE
Sbjct:    64 THYLRGLLPPVVLDQKLQEKRLLNNIRQYQFPLQKYMALTELQERNERLFYKLLIDNVEE 123

Query:   134 LLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERI 193
             LLP+VYTPTVGEACQK+GSIFRRPQGL+ISLK+KGKIL+VLKNWPER+IQVIVVTDGERI
Sbjct:   124 LLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKILDVLKNWPERNIQVIVVTDGERI 183

Query:   194 LGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRA 253
             LGLGDLGCQGMGIPVGKLALY+ALGG+RPSACLP+T+DVGTNNE+LL DEFYIGLRQ+RA
Sbjct:   184 LGLGDLGCQGMGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRA 243

Query:   254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXX 313
             TGQEY+ELL+EFMSAVKQNYGEKVLIQFEDFANHNAFELLAKY  THLVFNDDIQ     
Sbjct:   244 TGQEYSELLNEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYSDTHLVFNDDIQGTASV 303

Query:   314 XXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373
                            LAEH FLFLGAGEAGTGIAELIAL +SKQ  A VEE+RKKI LVD
Sbjct:   304 VLAGLVSAQKLTNSPLAEHTFLFLGAGEAGTGIAELIALYMSKQMNASVEESRKKIWLVD 363

Query:   374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433
             SKGLIV+SRKDSLQ FKKPWAHEHEPV +LL A+K IKPT+LIGSSGVGR+FTKEVIEAM
Sbjct:   364 SKGLIVNSRKDSLQDFKKPWAHEHEPVKDLLGAIKAIKPTVLIGSSGVGRSFTKEVIEAM 423

Query:   434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNA 493
             +S NE+PLI+ALSNPT+QSECTAEEAYTWSKGRAIFASGSPFDP EY GKVFV  QANNA
Sbjct:   424 SSINERPLIMALSNPTTQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKVFVSTQANNA 483

Query:   494 YIFPGFGLGLVISGAIRVHDDMLLAA 519
             YIFPGFGLGLVISGAIRVHDDMLLAA
Sbjct:   484 YIFPGFGLGLVISGAIRVHDDMLLAA 509

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004470 "malic enzyme activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006108 "malate metabolic process" evidence=IEA;ISS;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA

GO:0016652 "oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=IDA

GO:0005829 "cytosol" evidence=NAS

GO:0051260 "protein homooligomerization" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

TAIR\|locus:2017854 NADP-ME4 "NADP-malic enzyme 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2181980 NADP-ME2 "NADP-malic enzyme 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2180547 NADP-ME3 "NADP-malic enzyme 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P0Y6 ME1 "Malic enzyme" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:97043 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|3074 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|P13697 Me1 "NADP-dependent malic enzyme" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040801-147 me2 "malic enzyme 2, NAD(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|P48163 ME1 "NADP-dependent malic enzyme" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B7MMW1	MAO1_ECO45	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
A4SKE9	MAO1_AERS4	1, ., 1, ., 1, ., 3, 8	0.4536	0.9210	0.8475	yes	no
O82191	MAOP1_ARATH	1, ., 1, ., 1, ., 4, 0	0.8366	0.9672	0.8640	no	no
B7MUR3	MAO1_ECO81	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
A8A036	MAO1_ECOHS	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q8FHH1	MAO1_ECOL6	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P06801	MAOX_MOUSE	1, ., 1, ., 1, ., 4, 0	0.5567	0.8940	0.8111	yes	no
P28227	MAOX_ANAPL	1, ., 1, ., 1, ., 4, 0	0.5524	0.8940	0.8330	N/A	no
P13697	MAOX_RAT	1, ., 1, ., 1, ., 4, 0	0.5546	0.8940	0.8111	yes	no
Q29558	MAOX_PIG	1, ., 1, ., 1, ., 4, 0	0.5460	0.8940	0.8330	yes	no
B7LZ73	MAO1_ECO8A	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P34105	MAOX_POPTR	1, ., 1, ., 1, ., 4, 0	0.8854	0.9922	0.8714	yes	no
Q9XGZ0	MAOP3_ARATH	1, ., 1, ., 1, ., 4, 0	0.8083	0.9653	0.8520	no	no
C4ZWP8	MAO1_ECOBW	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
B7URL9	MAO1_ECO27	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q9LYG3	MAOP2_ARATH	1, ., 1, ., 1, ., 4, 0	0.8112	0.9595	0.8469	no	no
P22178	MAOC_FLATR	1, ., 1, ., 1, ., 4, 0	0.812	0.9614	0.7700	N/A	no
Q0THU1	MAO1_ECOL5	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q5QWY8	MAO1_IDILO	1, ., 1, ., 1, ., 3, 8	0.4430	0.9152	0.8451	yes	no
B7LQX1	MAO1_ESCF3	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
A0KHR8	MAO1_AERHH	1, ., 1, ., 1, ., 3, 8	0.4507	0.9190	0.8457	yes	no
Q83ML6	MAO1_SHIFL	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P37222	MAOC_SOLLC	1, ., 1, ., 1, ., 4, 0	0.818	0.9614	0.8708	N/A	no
P37223	MAOX_MESCR	1, ., 1, ., 1, ., 4, 0	0.7833	0.9807	0.8700	N/A	no
P51615	MAOX_VITVI	1, ., 1, ., 1, ., 4, 0	0.8786	1.0	0.8781	yes	no
P40927	MAOX_COLLI	1, ., 1, ., 1, ., 4, 0	0.5481	0.8940	0.8330	N/A	no
A8AGN6	MAO1_CITK8	1, ., 1, ., 1, ., 3, 8	0.4481	0.8901	0.8176	yes	no
B1XE70	MAO1_ECODH	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q6TU48	MAOX_DICDI	1, ., 1, ., 1, ., 4, 0	0.4882	0.8921	0.8511	yes	no
Q9CA83	MAOP4_ARATH	1, ., 1, ., 1, ., 4, 0	0.8145	0.9768	0.7848	yes	no
B7N4P2	MAO1_ECOLU	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q0T457	MAO1_SHIF8	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P48163	MAOX_HUMAN	1, ., 1, ., 1, ., 4, 0	0.5481	0.8940	0.8111	yes	no
B1LFD8	MAO1_ECOSM	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P12628	MAOX_PHAVU	1, ., 1, ., 1, ., 4, 0	0.8553	0.9460	0.8336	N/A	no
P16243	MAOC_MAIZE	1, ., 1, ., 1, ., 4, 0	0.8138	0.9210	0.7515	N/A	no
B7NHU3	MAO1_ECO7I	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q6FFL8	MAO1_ACIAD	1, ., 1, ., 1, ., 3, 8	0.4541	0.8940	0.8197	yes	no
B1IRX9	MAO1_ECOLC	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
A1AB75	MAO1_ECOK1	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
Q1RBT9	MAO1_ECOUT	1, ., 1, ., 1, ., 3, 8	0.4414	0.8978	0.8247	yes	no
P36444	MAOC_FLAPR	1, ., 1, ., 1, ., 4, 0	0.8310	0.9749	0.7820	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.40	0.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_XVIII2568	RecName- Full=NADP-dependent malic enzyme; Short=NADP-ME; EC=1.1.1.40; (591 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00100246	hypothetical protein (879 aa)		•	•		0.923
	eugene3.00030830	lactate dehydrogenase (EC-1.1.1.27) (351 aa)		•	•		0.911
	estExt_Genewise1_v1.C_2730019	malate dehydrogenase (EC-1.1.1.37) (332 aa)		•	•		0.905
	estExt_Genewise1_v1.C_LG_XIV1110	hypothetical protein (608 aa)	•	•		•	0.905
	eugene3.00021309	malate dehydrogenase (EC-1.1.1.37) (332 aa)		•	•		0.905
	eugene3.00081537	RecName- Full=Malate dehydrogenase; EC=1.1.1.37; (332 aa)		•	•		0.904
	estExt_fgenesh4_pg.C_LG_II1218	hypothetical protein (627 aa)	•	•		•	0.904
	fgenesh4_pg.C_LG_XV000664	malate synthase (EC-2.3.3.9) (554 aa)		•			0.902
	estExt_Genewise1_v1.C_LG_VII3984	phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (664 aa)		•	•		0.900
	estExt_fgenesh4_pg.C_LG_II0983	phosphoenolpyruvate carboxykinase (ATP) (EC-4.1.1.49) (667 aa)		•	•		0.900

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		519
PLN03129		581	PLN03129, PLN03129, NADP-dependent malic enzyme; P	0.0
PRK13529		563	PRK13529, PRK13529, malate dehydrogenase; Provisio	0.0
PTZ00317		559	PTZ00317, PTZ00317, NADP-dependent malic enzyme; P	0.0
cd05312		279	cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma	1e-118
pfam00390		182	pfam00390, malic, Malic enzyme, N-terminal domain	1e-105
pfam03949		255	pfam03949, Malic_M, Malic enzyme, NAD binding doma	1e-103
COG0281		432	COG0281, SfcA, Malic enzyme [Energy production and	1e-101
smart00919		231	smart00919, Malic_M, Malic enzyme, NAD binding dom	9e-81
cd00762		254	cd00762, NAD_bind_malic_enz, NAD(P) binding domain	2e-74
cd05311		226	cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma	2e-25
PRK12862		763	PRK12862, PRK12862, malic enzyme; Reviewed	3e-15
PRK07232		752	PRK07232, PRK07232, bifunctional malic enzyme oxid	4e-14
PRK12861		764	PRK12861, PRK12861, malic enzyme; Reviewed	3e-12
cd05191		86	cd05191, NAD_bind_amino_acid_DH, NAD(P) binding do	3e-08

>gnl\|CDD\|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional	Back alignment and domain information

 Score = 1008 bits (2608), Expect = 0.0
 Identities = 377/510 (73%), Positives = 432/510 (84%), Gaps = 1/510 (0%)

Query: 10  DGASVLDFDSKSTVEGGVEDVYGEDRATEDQLVTPWTISVASGYCLLRDPRHNKGLAFTE 69
             +S+ D   + +  GGVEDVYGED ATE+Q VTPW   VASGY LLRDPR+NKGLAFTE
Sbjct: 1   ASSSLADARRRRSAAGGVEDVYGEDAATEEQPVTPWV-RVASGYDLLRDPRYNKGLAFTE 59

Query: 70  KERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129
            ERD   LRGLLPPAV+SQ+LQ K+ M ++R  E PL KY A+M+L+ERNERLFY++LID
Sbjct: 60  TERDRLGLRGLLPPAVLSQELQVKRFMENLRALESPLAKYRALMDLQERNERLFYRVLID 119

Query: 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTD 189
           N+EELLP+VYTPTVGEACQKYGS+FRRP+GLYISLK+KG++L +LKNWPER +QVIVVTD
Sbjct: 120 NIEELLPIVYTPTVGEACQKYGSLFRRPRGLYISLKDKGRVLSMLKNWPERDVQVIVVTD 179

Query: 190 GERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLR 249
           GERILGLGDLG QGMGIPVGKL LYTA GGIRPSA LP+ +DVGTNNE+LL D FYIGLR
Sbjct: 180 GERILGLGDLGVQGMGIPVGKLDLYTAAGGIRPSAVLPVCIDVGTNNEKLLNDPFYIGLR 239

Query: 250 QRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 309
           Q R TG+EY EL+DEFM AVKQ +G KVL+QFEDFAN NAF LL +Y TTHL FNDDIQG
Sbjct: 240 QPRLTGEEYDELVDEFMEAVKQRWGPKVLVQFEDFANKNAFRLLQRYRTTHLCFNDDIQG 299

Query: 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369
           TA+V LAG++AAL+  GG LA+ R LF GAGEAGTGIAELIAL +S+QT    EE RK+I
Sbjct: 300 TAAVALAGLLAALRATGGDLADQRILFAGAGEAGTGIAELIALAMSRQTGISEEEARKRI 359

Query: 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEV 429
            LVDSKGL+  SRKDSLQ FKKP+AH+HEP  +LL+AVK IKPT+LIG SGVG TFTKEV
Sbjct: 360 WLVDSKGLVTKSRKDSLQPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEV 419

Query: 430 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQ 489
           +EAMAS NE+P+I ALSNPTS++ECTAEEAYTW+ GRAIFASGSPFDP EYNGK F PGQ
Sbjct: 420 LEAMASLNERPIIFALSNPTSKAECTAEEAYTWTGGRAIFASGSPFDPVEYNGKTFHPGQ 479

Query: 490 ANNAYIFPGFGLGLVISGAIRVHDDMLLAA 519
           ANNAYIFPG GLG ++SGAIRV DDMLLAA
Sbjct: 480 ANNAYIFPGIGLGALLSGAIRVTDDMLLAA 509

Length = 581

>gnl\|CDD\|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional	Back alignment and domain information

>gnl\|CDD\|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1	Back alignment and domain information

>gnl\|CDD\|215894 pfam00390, malic, Malic enzyme, N-terminal domain	Back alignment and domain information

>gnl\|CDD\|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain	Back alignment and domain information

>gnl\|CDD\|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain	Back alignment and domain information

>gnl\|CDD\|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme	Back alignment and domain information

>gnl\|CDD\|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2	Back alignment and domain information

>gnl\|CDD\|183799 PRK12862, PRK12862, malic enzyme; Reviewed	Back alignment and domain information

>gnl\|CDD\|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183798 PRK12861, PRK12861, malic enzyme; Reviewed	Back alignment and domain information

>gnl\|CDD\|133449 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding domain of amino acid dehydrogenase-like proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		519
KOG1257		582	consensus NADP+-dependent malic enzyme [Energy pro	100.0
PLN03129		581	NADP-dependent malic enzyme; Provisional	100.0
PRK13529		563	malate dehydrogenase; Provisional	100.0
PTZ00317		559	NADP-dependent malic enzyme; Provisional	100.0
COG0281		432	SfcA Malic enzyme [Energy production and conversio	100.0
PRK12861		764	malic enzyme; Reviewed	100.0
PRK12862		763	malic enzyme; Reviewed	100.0
PRK07232		752	bifunctional malic enzyme oxidoreductase/phosphotr	100.0
PF03949		255	Malic_M: Malic enzyme, NAD binding domain; InterPr	100.0
cd05312		279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	100.0
cd00762		254	NAD_bind_malic_enz NAD(P) binding domain of malic	100.0
PF00390		182	malic: Malic enzyme, N-terminal domain; InterPro:	100.0
cd05311		226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	100.0
cd05191		86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	98.9
PRK05476		425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.89
TIGR01035		417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.46
cd05211		217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	97.43
PLN02477		410	glutamate dehydrogenase	97.43
PRK09414		445	glutamate dehydrogenase; Provisional	97.38
cd05213		311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.29
TIGR00936		406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.27
PRK14030		445	glutamate dehydrogenase; Provisional	97.22
PRK14031		444	glutamate dehydrogenase; Provisional	97.21
PRK00045		423	hemA glutamyl-tRNA reductase; Reviewed	97.2
cd00401		413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.18
PLN02494		477	adenosylhomocysteinase	97.09
cd01080		168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.08
TIGR02853		287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.07
PRK14982		340	acyl-ACP reductase; Provisional	97.05
PF01488		135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.05
PRK08306		296	dipicolinate synthase subunit A; Reviewed	96.88
COG0373		414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.88
PTZ00079		454	NADP-specific glutamate dehydrogenase; Provisional	96.87
PLN00203		519	glutamyl-tRNA reductase	96.75
cd01076		227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	96.66
cd05313		254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	96.61
cd01075		200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.47
PTZ00075		476	Adenosylhomocysteinase; Provisional	96.47
PLN00106		323	malate dehydrogenase	96.41
PRK13940		414	glutamyl-tRNA reductase; Provisional	96.36
PRK14175		286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.28
PF00670		162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.23
PRK14192		283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
cd01065		155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.98
cd01078		194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.97
PRK12549		284	shikimate 5-dehydrogenase; Reviewed	95.86
TIGR00518		370	alaDH alanine dehydrogenase. The family of known L	95.81
cd00650		263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.7
PRK00676		338	hemA glutamyl-tRNA reductase; Validated	95.56
TIGR01809		282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.45
cd05291		306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.41
PF00056		141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	95.18
PF03807		96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.18
PRK08293		287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.14
PF00208		244	ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val	95.08
PRK10792		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
PRK05086		312	malate dehydrogenase; Provisional	95.02
cd05296		419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	95.0
cd05212		140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.95
PTZ00082		321	L-lactate dehydrogenase; Provisional	94.84
PRK00066		315	ldh L-lactate dehydrogenase; Reviewed	94.8
PRK09424		509	pntA NAD(P) transhydrogenase subunit alpha; Provis	94.67
PRK14191		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.61
PTZ00117		319	malate dehydrogenase; Provisional	94.55
cd05197		425	GH4_glycoside_hydrolases Glycoside Hydrases Family	94.51
TIGR02356		202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.39
PRK06223		307	malate dehydrogenase; Reviewed	94.36
PRK08605		332	D-lactate dehydrogenase; Validated	94.07
PTZ00325		321	malate dehydrogenase; Provisional	94.03
TIGR02354		200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.84
TIGR00561		511	pntA NAD(P) transhydrogenase, alpha subunit. In so	93.83
PRK08328		231	hypothetical protein; Provisional	93.81
PRK08223		287	hypothetical protein; Validated	93.75
PRK12475		338	thiamine/molybdopterin biosynthesis MoeB-like prot	93.67
cd01079		197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.48
COG0334		411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	93.45
PRK00257		381	erythronate-4-phosphate dehydrogenase; Validated	93.43
PRK15076		431	alpha-galactosidase; Provisional	93.37
PLN02928		347	oxidoreductase family protein	93.31
PRK14189		285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.11
PRK08644		212	thiamine biosynthesis protein ThiF; Provisional	93.07
PRK12749		288	quinate/shikimate dehydrogenase; Reviewed	93.04
PRK08762		376	molybdopterin biosynthesis protein MoeB; Validated	92.9
PF02826		178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	92.89
TIGR02992		326	ectoine_eutC ectoine utilization protein EutC. Mem	92.76
PRK15438		378	erythronate-4-phosphate dehydrogenase PdxB; Provis	92.74
PRK14178		279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.67
PRK14194		301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.63
PRK06129		308	3-hydroxyacyl-CoA dehydrogenase; Validated	92.57
cd05297		423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	92.56
cd01487		174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	92.55
PRK09260		288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.52
PRK14619		308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.36
PRK14176		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.35
TIGR01915		219	npdG NADPH-dependent F420 reductase. This model re	92.28
PRK14027		283	quinate/shikimate dehydrogenase; Provisional	92.27
cd00704		323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	92.26
PRK06130		311	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.24
PRK05600		370	thiamine biosynthesis protein ThiF; Validated	92.21
PRK12548		289	shikimate 5-dehydrogenase; Provisional	91.95
PF01210		157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	91.75
TIGR01763		305	MalateDH_bact malate dehydrogenase, NAD-dependent.	91.67
PRK07688		339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	91.62
TIGR01758		324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	91.58
COG0111		324	SerA Phosphoglycerate dehydrogenase and related de	91.49
PRK00258		278	aroE shikimate 5-dehydrogenase; Reviewed	91.49
PF00899		135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	91.33
cd05293		312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	91.23
cd01337		310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	91.21
PRK14183		281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.67
PF01262		168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	90.66
PRK14184		286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.41
PRK07574		385	formate dehydrogenase; Provisional	90.24
cd01336		325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	90.2
COG0169		283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	90.17
PRK14190		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.14
PRK06035		291	3-hydroxyacyl-CoA dehydrogenase; Validated	90.1
PRK05442		326	malate dehydrogenase; Provisional	90.09
cd01338		322	MDH_choloroplast_like Chloroplast-like malate dehy	90.01
PRK14618		328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	89.87
TIGR01772		312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	89.79
PRK14179		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.75
COG0686		371	Ald Alanine dehydrogenase [Amino acid transport an	89.73
cd05298		437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	89.73
PRK07634		245	pyrroline-5-carboxylate reductase; Reviewed	89.68
PRK14851		679	hypothetical protein; Provisional	89.45
PRK08291		330	ectoine utilization protein EutC; Validated	89.43
cd05292		308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	89.26
PRK02842		427	light-independent protochlorophyllide reductase su	89.16
PF02882		160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	89.14
PRK08374		336	homoserine dehydrogenase; Provisional	89.09
cd05290		307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	89.03
PRK14174		295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.94
PRK14188		296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.91
TIGR00872		298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	88.84
PRK14177		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.65
TIGR01759		323	MalateDH-SF1 malate dehydrogenase. This model repr	88.6
PRK07531		495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	88.48
PRK14172		278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.37
PRK11880		267	pyrroline-5-carboxylate reductase; Reviewed	88.31
PRK12550		272	shikimate 5-dehydrogenase; Reviewed	88.27
PLN02602		350	lactate dehydrogenase	88.25
PRK07066		321	3-hydroxybutyryl-CoA dehydrogenase; Validated	88.04
PRK13243		333	glyoxylate reductase; Reviewed	87.84
PLN02306		386	hydroxypyruvate reductase	87.83
PRK14171		288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.62
cd00757		228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	87.58
PLN02516		299	methylenetetrahydrofolate dehydrogenase (NADP+)	87.47
PF02056		183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	87.31
PRK14187		294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.29
TIGR02355		240	moeB molybdopterin synthase sulfurylase MoeB. This	87.2
PTZ00345		365	glycerol-3-phosphate dehydrogenase; Provisional	87.17
PRK15317		517	alkyl hydroperoxide reductase subunit F; Provision	87.1
PRK14106		450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	87.08
PRK00094		325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	87.0
PRK12921		305	2-dehydropantoate 2-reductase; Provisional	86.98
PRK06141		314	ornithine cyclodeaminase; Validated	86.9
cd01485		198	E1-1_like Ubiquitin activating enzyme (E1), repeat	86.82
PRK14166		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.76
cd01339		300	LDH-like_MDH L-lactate dehydrogenase-like malate d	86.76
PRK14193		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.64
TIGR03140		515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	86.58
PRK14170		284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.43
KOG0029		501	consensus Amine oxidase [Secondary metabolites bio	86.28
PRK06522		304	2-dehydropantoate 2-reductase; Reviewed	86.17
PRK12480		330	D-lactate dehydrogenase; Provisional	86.07
COG0345		266	ProC Pyrroline-5-carboxylate reductase [Amino acid	86.0
cd01492		197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	85.92
PRK15116		268	sulfur acceptor protein CsdL; Provisional	85.87
PRK01710		458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	85.46
PRK15469		312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	85.38
TIGR01408		1008	Ube1 ubiquitin-activating enzyme E1. This model re	85.36
PRK05690		245	molybdopterin biosynthesis protein MoeB; Provision	85.23
PRK14185		293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.16
PRK06436		303	glycerate dehydrogenase; Provisional	85.15
PRK14168		297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.04
KOG0685		498	consensus Flavin-containing amine oxidase [Coenzym	85.0
TIGR01771		299	L-LDH-NAD L-lactate dehydrogenase. This model repr	84.98
PRK09880		343	L-idonate 5-dehydrogenase; Provisional	84.64
cd05294		309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	84.56
PRK08410		311	2-hydroxyacid dehydrogenase; Provisional	84.4
PF07992		201	Pyr_redox_2: Pyridine nucleotide-disulphide oxidor	84.25
PRK07680		273	late competence protein ComER; Validated	84.13
PRK06487		317	glycerate dehydrogenase; Provisional	84.1
TIGR00507		270	aroE shikimate 5-dehydrogenase. This model finds p	83.74
PRK14169		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.64
cd00300		300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	83.43
cd01483		143	E1_enzyme_family Superfamily of activating enzymes	83.36
PRK09599		301	6-phosphogluconate dehydrogenase-like protein; Rev	83.08
PRK14180		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.94
TIGR03366		280	HpnZ_proposed putative phosphonate catabolism asso	82.85
cd00755		231	YgdL_like Family of activating enzymes (E1) of ubi	82.84
PRK09310		477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	82.65
PRK05597		355	molybdopterin biosynthesis protein MoeB; Validated	82.56
PRK14620		326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	82.49
PLN03139		386	formate dehydrogenase; Provisional	82.48
PRK13581		526	D-3-phosphoglycerate dehydrogenase; Provisional	82.31
PRK06153		393	hypothetical protein; Provisional	82.26
PRK14182		282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.09
COG0039		313	Mdh Malate/lactate dehydrogenases [Energy producti	82.08
PRK07679		279	pyrroline-5-carboxylate reductase; Reviewed	82.05
PLN02616		364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	82.02
TIGR01381		664	E1_like_apg7 E1-like protein-activating enzyme Gsa	82.02
PRK14173		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.99
PRK11790		409	D-3-phosphoglycerate dehydrogenase; Provisional	81.97
PLN00112		444	malate dehydrogenase (NADP); Provisional	81.83
TIGR02371		325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	81.79
PRK12439		341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	81.7
PRK14181		287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.61
PRK14167		297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	81.24
TIGR01327		525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	80.95
PRK07340		304	ornithine cyclodeaminase; Validated	80.7
PRK08229		341	2-dehydropantoate 2-reductase; Provisional	80.47
PRK07530		292	3-hydroxybutyryl-CoA dehydrogenase; Validated	80.38

>KOG1257 consensus NADP+-dependent malic enzyme [Energy production and conversion]	Back alignment and domain information

Probab=100.00  E-value=2.3e-200  Score=1562.19  Aligned_cols=477  Identities=67%  Similarity=1.089  Sum_probs=470.9

Q ss_pred             cccc-cccccccccccccCCCCCCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhh
Q 010044           42 VTPW-TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNE  120 (519)
Q Consensus        42 ~~~~-~~~~~~G~~ll~~p~~NkG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne  120 (519)
                      ..+| ..++.+|+++|+||++|||+|||.+||++|||||||||.|+|+|+|++||+.+|+++++||+||+||++||+|||
T Consensus        20 ~~~~~~~~~~~g~~ll~~p~~NKglAFTl~ERq~l~i~GLLPp~v~t~d~Q~~r~~~~l~~~~~~l~ky~~L~~L~~rNe   99 (582)
T KOG1257|consen   20 ITPRPVESKKRGYDLLRDPRYNKGLAFTLEERQRLGIHGLLPPVVRTQDEQALRCMNNLRSLTSPLAKYIYLMDLQDRNE   99 (582)
T ss_pred             ccccccccccCChhhccCCCcccccccCHHHHHhhCccccCCccccCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhh
Confidence            3444 667889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHhhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccccchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 010044          121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG  200 (519)
Q Consensus       121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG  200 (519)
                      +|||++|++|+||+||||||||||+|||+||+|||+|+|||||++|+|||.++|+|||.++|++||||||+|||||||||
T Consensus       100 rLfY~~l~~nie~~~PIvYTPTvG~acq~y~~i~r~p~Glfisi~D~Ghi~~~l~nWp~~~V~~IvVTDGerILGLGDlG  179 (582)
T KOG1257|consen  100 RLFYRLLIDNIEELLPIVYTPTVGLACQQYGLIFRRPQGLFISIKDKGHIKQVLKNWPERNVKAIVVTDGERILGLGDLG  179 (582)
T ss_pred             HHHHHHHHhhHHHhCCeeecCcHHHHHHHhhhhhccCceeEEEecccchHHHHHHhCCccceeEEEEeCCCceecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccchhhhhhHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeee
Q 010044          201 CQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQ  280 (519)
Q Consensus       201 ~~GmgI~iGKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq  280 (519)
                      ++|||||+||++||||||||+|++|||||||||||||+||+||||+|+||+|++|++|++|+||||+||+++|||+++||
T Consensus       180 ~~GmgIpvgKL~Lyta~~GI~P~~cLPV~LDVGTNNe~Ll~DplYiGLr~~R~~g~eYd~~~dEFm~Av~~~yG~~~lIq  259 (582)
T KOG1257|consen  180 VNGMGIPVGKLALYTALGGIRPSRCLPVCLDVGTNNEKLLNDPLYIGLRQRRVRGKEYDEFLDEFMEAVVQRYGPNTLIQ  259 (582)
T ss_pred             cCcccceecHHHHHHHhcCCChhhceeEEEeccCChHHHhcCccccccccccccccHHHHHHHHHHHHHHHHhCcceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCccHHHHHHHHcCCCceeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHhhcCC
Q 010044          281 FEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA  360 (519)
Q Consensus       281 fEDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~  360 (519)
                      ||||+++|||++|+|||.++|||||||||||+|+|||||+|+|++|++|+|++|||+|||+||+|||+||+.+|+++ |+
T Consensus       260 FEDF~~~nAfrlL~kYr~~~c~FNDDIQGTaaValAgllaa~rit~~~lsd~~ilf~GAG~A~~GIA~l~v~~m~~~-Gl  338 (582)
T KOG1257|consen  260 FEDFANHNAFRLLEKYRNKYCMFNDDIQGTAAVALAGLLAALRITGKPLSDHVILFLGAGEAALGIANLIVMAMVKE-GL  338 (582)
T ss_pred             ehhccchhHHHHHHHhccccceecccccchhHHHHHHHHHHHHHhCCccccceEEEecCchHHhhHHHHHHHHHHHc-CC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999996 99


Q ss_pred             ChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCc
Q 010044          361 PVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKP  440 (519)
Q Consensus       361 ~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erP  440 (519)
                      |+|||+|||||+|++|||+++|+.+++++|++||++++++++|+|||+.||||||||+|+++|+|||||||+|+++||||
T Consensus       339 ~~eeA~kkIwlvD~~GLi~~~r~~~l~~~~~~fAk~~~~~~~L~e~V~~vKPtvLiG~S~~~g~Fteevl~~Ma~~~erP  418 (582)
T KOG1257|consen  339 SEEEARKKIWLVDSKGLITKGRKASLTEEKKPFAKDHEEIKDLEEAVKEVKPTVLIGASGVGGAFTEEVLRAMAKSNERP  418 (582)
T ss_pred             CHHHHhccEEEEecCceeeccccCCCChhhccccccChHHHHHHHHHHhcCCcEEEecccCCccCCHHHHHHHHhcCCCc
Confidence            99999999999999999999998789999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHhcccCCcEEEEcCCCCCccccCCEEecccCccceeechhhhHHHHHhCCcccChhhhhcC
Q 010044          441 LILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAA  519 (519)
Q Consensus       441 IIFaLSNPt~~~E~tpe~A~~wt~G~aifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aA  519 (519)
                      |||||||||+++||||||||+||+|+|||||||||+||+++||+|+|||+||+|+|||||||+++|++++|+|+||++|
T Consensus       419 iIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV~~~gK~~~pgQ~NN~yiFPGi~Lg~vlsg~~~i~D~mfl~A  497 (582)
T KOG1257|consen  419 IIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPVEYNGKVYVPGQGNNAYIFPGIGLGVVLSGARRIPDEMFLAA  497 (582)
T ss_pred             eEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCceeCCcEecccCCceeEecchHHHHHHHcCCccCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999986

>PLN03129 NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>PRK13529 malate dehydrogenase; Provisional	Back alignment and domain information

>PTZ00317 NADP-dependent malic enzyme; Provisional	Back alignment and domain information

>COG0281 SfcA Malic enzyme [Energy production and conversion]	Back alignment and domain information

>PRK12861 malic enzyme; Reviewed	Back alignment and domain information

>PRK12862 malic enzyme; Reviewed	Back alignment and domain information

>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	Back alignment and domain information

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e	Back alignment and domain information

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1	Back alignment and domain information

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme	Back alignment and domain information

>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e	Back alignment and domain information

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2	Back alignment and domain information

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins	Back alignment and domain information

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional	Back alignment and domain information

>TIGR01035 hemA glutamyl-tRNA reductase	Back alignment and domain information

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase	Back alignment and domain information

>PLN02477 glutamate dehydrogenase	Back alignment and domain information

>PRK09414 glutamate dehydrogenase; Provisional	Back alignment and domain information

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase	Back alignment and domain information

>TIGR00936 ahcY adenosylhomocysteinase	Back alignment and domain information

>PRK14030 glutamate dehydrogenase; Provisional	Back alignment and domain information

>PRK14031 glutamate dehydrogenase; Provisional	Back alignment and domain information

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed	Back alignment and domain information

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)	Back alignment and domain information

>PLN02494 adenosylhomocysteinase	Back alignment and domain information

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase	Back alignment and domain information

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit	Back alignment and domain information

>PRK14982 acyl-ACP reductase; Provisional	Back alignment and domain information

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases	Back alignment and domain information

>PRK08306 dipicolinate synthase subunit A; Reviewed	Back alignment and domain information

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	Back alignment and domain information

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional	Back alignment and domain information

>PLN00203 glutamyl-tRNA reductase	Back alignment and domain information

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1	Back alignment and domain information

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2	Back alignment and domain information

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase	Back alignment and domain information

>PTZ00075 Adenosylhomocysteinase; Provisional	Back alignment and domain information

>PLN00106 malate dehydrogenase	Back alignment and domain information

>PRK13940 glutamyl-tRNA reductase; Provisional	Back alignment and domain information

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3	Back alignment and domain information

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase	Back alignment and domain information

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase	Back alignment and domain information

>PRK12549 shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>TIGR00518 alaDH alanine dehydrogenase	Back alignment and domain information

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family	Back alignment and domain information

>PRK00676 hemA glutamyl-tRNA reductase; Validated	Back alignment and domain information

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type	Back alignment and domain information

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases	Back alignment and domain information

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []	Back alignment and domain information

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain	Back alignment and domain information

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related	Back alignment and domain information

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK05086 malate dehydrogenase; Provisional	Back alignment and domain information

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	Back alignment and domain information

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase	Back alignment and domain information

>PTZ00082 L-lactate dehydrogenase; Provisional	Back alignment and domain information

>PRK00066 ldh L-lactate dehydrogenase; Reviewed	Back alignment and domain information

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional	Back alignment and domain information

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PTZ00117 malate dehydrogenase; Provisional	Back alignment and domain information

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4	Back alignment and domain information

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E	Back alignment and domain information

>PRK06223 malate dehydrogenase; Reviewed	Back alignment and domain information

>PRK08605 D-lactate dehydrogenase; Validated	Back alignment and domain information

>PTZ00325 malate dehydrogenase; Provisional	Back alignment and domain information

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2	Back alignment and domain information

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit	Back alignment and domain information

>PRK08328 hypothetical protein; Provisional	Back alignment and domain information

>PRK08223 hypothetical protein; Validated	Back alignment and domain information

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional	Back alignment and domain information

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase	Back alignment and domain information

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated	Back alignment and domain information

>PRK15076 alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02928 oxidoreductase family protein	Back alignment and domain information

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK08644 thiamine biosynthesis protein ThiF; Provisional	Back alignment and domain information

>PRK12749 quinate/shikimate dehydrogenase; Reviewed	Back alignment and domain information

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated	Back alignment and domain information

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related	Back alignment and domain information

>TIGR02992 ectoine_eutC ectoine utilization protein EutC	Back alignment and domain information

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional	Back alignment and domain information

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated	Back alignment and domain information

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases	Back alignment and domain information

>cd01487 E1_ThiF_like E1_ThiF_like	Back alignment and domain information

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR01915 npdG NADPH-dependent F420 reductase	Back alignment and domain information

>PRK14027 quinate/shikimate dehydrogenase; Provisional	Back alignment and domain information

>cd00704 MDH Malate dehydrogenase	Back alignment and domain information

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK05600 thiamine biosynthesis protein ThiF; Validated	Back alignment and domain information

>PRK12548 shikimate 5-dehydrogenase; Provisional	Back alignment and domain information

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate	Back alignment and domain information

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent	Back alignment and domain information

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	Back alignment and domain information

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent	Back alignment and domain information

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]	Back alignment and domain information

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP	Back alignment and domain information

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases	Back alignment and domain information

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1	Back alignment and domain information

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK07574 formate dehydrogenase; Provisional	Back alignment and domain information

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases	Back alignment and domain information

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK05442 malate dehydrogenase; Provisional	Back alignment and domain information

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases	Back alignment and domain information

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent	Back alignment and domain information

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases	Back alignment and domain information

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PRK14851 hypothetical protein; Provisional	Back alignment and domain information

>PRK08291 ectoine utilization protein EutC; Validated	Back alignment and domain information

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional	Back alignment and domain information

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)	Back alignment and domain information

>PRK08374 homoserine dehydrogenase; Provisional	Back alignment and domain information

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases	Back alignment and domain information

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)	Back alignment and domain information

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR01759 MalateDH-SF1 malate dehydrogenase	Back alignment and domain information

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated	Back alignment and domain information

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PRK12550 shikimate 5-dehydrogenase; Reviewed	Back alignment and domain information

>PLN02602 lactate dehydrogenase	Back alignment and domain information

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

>PRK13243 glyoxylate reductase; Reviewed	Back alignment and domain information

>PLN02306 hydroxypyruvate reductase	Back alignment and domain information

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA	Back alignment and domain information

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)	Back alignment and domain information

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3	Back alignment and domain information

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB	Back alignment and domain information

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional	Back alignment and domain information

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	Back alignment and domain information

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated	Back alignment and domain information

>PRK12921 2-dehydropantoate 2-reductase; Provisional	Back alignment and domain information

>PRK06141 ornithine cyclodeaminase; Validated	Back alignment and domain information

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like	Back alignment and domain information

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins	Back alignment and domain information

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit	Back alignment and domain information

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PRK06522 2-dehydropantoate 2-reductase; Reviewed	Back alignment and domain information

>PRK12480 D-lactate dehydrogenase; Provisional	Back alignment and domain information

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]	Back alignment and domain information

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1	Back alignment and domain information

>PRK15116 sulfur acceptor protein CsdL; Provisional	Back alignment and domain information

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	Back alignment and domain information

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional	Back alignment and domain information

>TIGR01408 Ube1 ubiquitin-activating enzyme E1	Back alignment and domain information

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional	Back alignment and domain information

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK06436 glycerate dehydrogenase; Provisional	Back alignment and domain information

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism]	Back alignment and domain information

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase	Back alignment and domain information

>PRK09880 L-idonate 5-dehydrogenase; Provisional	Back alignment and domain information

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity	Back alignment and domain information

>PRK08410 2-hydroxyacid dehydrogenase; Provisional	Back alignment and domain information

>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Back alignment and domain information

>PRK07680 late competence protein ComER; Validated	Back alignment and domain information

>PRK06487 glycerate dehydrogenase; Provisional	Back alignment and domain information

>TIGR00507 aroE shikimate 5-dehydrogenase	Back alignment and domain information

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes	Back alignment and domain information

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins	Back alignment and domain information

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed	Back alignment and domain information

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase	Back alignment and domain information

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E	Back alignment and domain information

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed	Back alignment and domain information

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated	Back alignment and domain information

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PLN03139 formate dehydrogenase; Provisional	Back alignment and domain information

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional	Back alignment and domain information

>PRK06153 hypothetical protein; Provisional	Back alignment and domain information

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]	Back alignment and domain information

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed	Back alignment and domain information

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative	Back alignment and domain information

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p	Back alignment and domain information

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional	Back alignment and domain information

>PLN00112 malate dehydrogenase (NADP); Provisional	Back alignment and domain information

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type	Back alignment and domain information

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	Back alignment and domain information

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase	Back alignment and domain information

>PRK07340 ornithine cyclodeaminase; Validated	Back alignment and domain information

>PRK08229 2-dehydropantoate 2-reductase; Provisional	Back alignment and domain information

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated	Back alignment and domain information

Homologous Structure Templates