Citrus Sinensis ID: 010059

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52
MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
cccccccccccccEEEEEEEccccEEEEEEEEEccccEEEEEcccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHHcccHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHHccccccccEEEEEEccccEEEEEEEccEEEEEEEEEccHHHccHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHccccEEEEEHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccEEEcccccccc
cccccccccccccEEEEEEcccccEEEEEEEEcccccEEEEEEcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEHHHHHHcccHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHcccccccccEEEEEEccccEEEEEccccccHEEHHccccHHEHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHccccEEEEccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHccccccccccHHHHHHHHHHHHHHHcccEEEccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccHHccccccEcc
matntsymqipqTLFASIDMGTSSFKLLIIRaypngkfltidtlkqpvilgrdlssscsistqSQARSVESLLMFRDIIQshnisrdhTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSvdigggstefvigkrgkvvfcesvnlghvslsekfgtcsgnFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSgydrdfvdnvgdfggckrdwrlsrGELKGIVERLccggdgevERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLakvfdgydlnaNARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNighftskkgyhkqschiimngdhlygystDEIKLIALLTRFhrkkfprshhafLEEFPEQAKQKFRVLCAIVRLSVILqqndcvnlrgvdffhsyegfkldghppftlt
matntsymqipQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQshnisrdhtRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGhvslsekfgtcsgNFEEVLKMREYVRMVILEFGLVEKVKESGFevavgssgtirAIEKAvvsgydrdfvdnvgdfggckrdwrlsrgelkgiverlccggdgeverVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNnkkrvkagaqcASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHsyegfkldghppftlt
MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLssscsistqsqarsVESLLMFRDIIQSHNISRDHtravataavraaENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGevervrrerffkrrsefIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
********QIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLS*************VESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLD********
***************ASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKK**********EFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLS***********RSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
**********PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKLDGHPPFTLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query519 2.2.26 [Sep-21-2011]
Q9ZN70506 Exopolyphosphatase OS=Pse yes no 0.838 0.859 0.270 2e-37
A8G827498 Guanosine-5'-triphosphate yes no 0.815 0.849 0.279 3e-36
C6DHF6498 Guanosine-5'-triphosphate yes no 0.811 0.845 0.272 3e-33
B2VG72494 Guanosine-5'-triphosphate yes no 0.757 0.795 0.274 1e-32
A8ACT2494 Guanosine-5'-triphosphate yes no 0.815 0.856 0.286 1e-32
B1JQ12498 Guanosine-5'-triphosphate no no 0.805 0.839 0.276 3e-32
Q66G20498 Guanosine-5'-triphosphate no no 0.805 0.839 0.276 3e-32
A4TRC9498 Guanosine-5'-triphosphate no no 0.805 0.839 0.276 3e-32
A9R8H6498 Guanosine-5'-triphosphate no no 0.805 0.839 0.276 3e-32
Q74R94498 Guanosine-5'-triphosphate no no 0.805 0.839 0.276 3e-32
>sp|Q9ZN70|PPX_PSEAE Exopolyphosphatase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ppx PE=3 SV=1 Back     alignment and function desciption
 Score =  157 bits (397), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 45/480 (9%)

Query: 13  TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL 72
            L A++D+G++SF L + +A  +G+   ++ L + V L   L    ++S ++  R ++ L
Sbjct: 15  PLIAALDLGSNSFHLCLAKANIHGEVRILERLGEKVQLAAGLDEERNLSEEATQRGLDCL 74

Query: 73  LMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYM 132
             F   I    + +   R VAT A+R A N+ +F+    E +G  V+V++G +EA+ +Y+
Sbjct: 75  RRFAQFIS--GMPQGSVRVVATNALREARNRSDFIRRAEEVLGHPVEVISGREEARLIYL 132

Query: 133 GVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEV 192
           GV   +P      L  DIGGGSTEF+IG+  +    ES+ +G VS ++++    G     
Sbjct: 133 GVANSMPDSGGRRLVSDIGGGSTEFIIGQGFESELRESLQMGCVSYTQRY-FRDGKITPA 191

Query: 193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGGC 252
              + Y    +   G+   ++  G++ AVG+SGTIRA+  A+ +G   +     G+    
Sbjct: 192 RYAQAYTAARLELMGIENSLRRLGWQQAVGASGTIRAVALAIKAGGHGN-----GEISPD 246

Query: 253 KRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEE 312
              W      LK  V +L     G+VE++  E     R     AG  +L+ IF+ L +E+
Sbjct: 247 GLAW------LKRKVLKL-----GDVEKLDLEGIKPDRRTIFPAGLAILEAIFDALELEQ 295

Query: 313 MEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRF--NNKKRVKAGAQCASIA 370
           M  S   L EGV+ D +     G   + + R R++  L  R+  + ++  +  A+   + 
Sbjct: 296 MVHSEGALREGVLYDLV-----GRHQHEDVRERTISSLMQRYHVDPEQASRVEAKALKVL 350

Query: 371 KDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMN 430
            ++ +      +L+            +DL  L     +H IG   +   YHK   ++I +
Sbjct: 351 AEVGDAWELNGELH------------RDL--LSWGARVHEIGLDIAHYHYHKHGAYLIEH 396

Query: 431 GDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490
            D L G+S  + ++++LL R HR+  P      L EF E+  +  R LC ++R +++   
Sbjct: 397 SD-LAGFSRQDQQMLSLLVRGHRRNIPADK---LAEFAEEGDKLVR-LCIVLRFAILFHH 451
Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate.
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1EC: 1
>sp|A8G827|GPPA_SERP5 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Serratia proteamaculans (strain 568) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|C6DHF6|GPPA_PECCP Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|B2VG72|GPPA_ERWT9 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|A8ACT2|GPPA_CITK8 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|B1JQ12|GPPA_YERPY Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|Q66G20|GPPA_YERPS Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|A4TRC9|GPPA_YERPP Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pestis (strain Pestoides F) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|A9R8H6|GPPA_YERPG Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gppA PE=3 SV=1 Back     alignment and function description
>sp|Q74R94|GPPA_YERPE Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase OS=Yersinia pestis GN=gppA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
225450640572 PREDICTED: exopolyphosphatase [Vitis vin 0.949 0.861 0.595 1e-169
224123694495 predicted protein [Populus trichocarpa] 0.944 0.989 0.617 1e-164
255542850615 Guanosine-5'-triphosphate,3'-diphosphate 0.938 0.791 0.59 1e-163
147856441545 hypothetical protein VITISV_019566 [Viti 0.897 0.855 0.561 1e-153
334182412600 uncharacterized protein [Arabidopsis tha 0.951 0.823 0.582 1e-153
3249102568 Similar to exopolyphosphatase gb|1653871 0.951 0.869 0.570 1e-151
297849216 1014 pentatricopeptide repeat-containing prot 0.928 0.475 0.563 1e-148
170792416520 Ppx-GppA phosphatase protein (exopolypho 0.890 0.888 0.555 1e-140
170792414564 Ppx-GppA phosphatase protein (exopolypho 0.944 0.868 0.488 1e-130
170792412422 Ppx-GppA phosphatase protein [Eutrema sa 0.793 0.976 0.580 1e-127
>gi|225450640|ref|XP_002278296.1| PREDICTED: exopolyphosphatase [Vitis vinifera] gi|296089751|emb|CBI39570.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 300/504 (59%), Positives = 391/504 (77%), Gaps = 11/504 (2%)

Query: 11  PQTLFASIDMGTSSFKLLIIRAYPN-GKFLTIDTLKQPVILGRDLSSSCSISTQSQARSV 69
           P  LFASIDMGT+SFKLL ++  P+ GKFL +  LK+PV+LGR  +S+ + +  SQ R++
Sbjct: 13  PTNLFASIDMGTNSFKLLTVQFNPSTGKFLHLHRLKEPVVLGRQAASA-AAAVDSQLRAI 71

Query: 70  ESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129
           E+L  FR+ +Q+H I R   R VATAAVR A N+ EF+  VR++VGFEV+VL+GE+EA+ 
Sbjct: 72  EALKEFRNFLQNHEIHRH--RTVATAAVREAGNQAEFLRRVRDEVGFEVEVLSGEEEARL 129

Query: 130 VYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNF 189
           +Y+G LQFLP++++  L +DIGGGSTEF++G++GK +F  SV LGHV+L++KF     N 
Sbjct: 130 IYLGALQFLPIYEKTALVIDIGGGSTEFLLGQKGKAIFGTSVKLGHVNLTQKFV----NH 185

Query: 190 EEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDF 249
            E+L+MR ++R ++ + G+VEK+K  GFE+AVGSSGT+++IEKA+ SG+ R+ V N G  
Sbjct: 186 NEILQMRSHIRSILRQCGIVEKIKHHGFEIAVGSSGTVQSIEKAIFSGFSRNVVSNDGAL 245

Query: 250 -GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL 308
            G   RDWR SR EL+ +VERLC GG   +ER RR+RFFKRRSEFIVAGAVLLDEIF +L
Sbjct: 246 CGDLGRDWRFSREELRILVERLCGGGGEAIERARRDRFFKRRSEFIVAGAVLLDEIFAML 305

Query: 309 GIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCAS 368
            IEEMEVSGY LGEGVVA+ L +V D YD NANARW SVVRLA RF  KK++   +QCA+
Sbjct: 306 DIEEMEVSGYALGEGVVAEMLLQVCDNYDFNANARWGSVVRLATRFLGKKKMGTASQCAN 365

Query: 369 IAKDIFEGLRKCDKL--YNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCH 426
           I K IFEGLRKCD L    NQVKL  S  DKDLEYLEAAC+LHNIG  T +KGYHKQSC+
Sbjct: 366 ITKVIFEGLRKCDTLAETENQVKLPVSLNDKDLEYLEAACVLHNIGLITGEKGYHKQSCN 425

Query: 427 IIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSV 486
           IIMNGDHLYGYST+E+KLIALL R HRKKFP+ +H  L+EF ++ K+KF++LCAI+R+S+
Sbjct: 426 IIMNGDHLYGYSTEEVKLIALLARHHRKKFPKPNHGSLKEFSKEVKEKFKMLCAIIRVSI 485

Query: 487 ILQQNDCVNLRGVDFFHSYEGFKL 510
            +Q++  +N++G++F  S EGFKL
Sbjct: 486 AVQKHRGLNIQGMEFSRSSEGFKL 509

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224123694|ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|222871641|gb|EEF08772.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542850|ref|XP_002512488.1| Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, putative [Ricinus communis] gi|223548449|gb|EEF49940.1| Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147856441|emb|CAN82841.1| hypothetical protein VITISV_019566 [Vitis vinifera] Back     alignment and taxonomy information
>gi|334182412|ref|NP_001184946.1| uncharacterized protein [Arabidopsis thaliana] gi|332190291|gb|AEE28412.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3249102|gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Synechocystis sp. gb|D90917 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|170792416|emb|CAP08388.2| Ppx-GppA phosphatase protein (exopolyphosphatase) [Lupinus albus] Back     alignment and taxonomy information
>gi|170792414|emb|CAP08387.1| Ppx-GppA phosphatase protein (exopolyphosphatase) [Capsicum annuum] Back     alignment and taxonomy information
>gi|170792412|emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
UNIPROTKB|Q87UP7500 ppx "Exopolyphosphatase" [Pseu 0.445 0.462 0.266 4.1e-25
UNIPROTKB|Q9KU08500 ppx "Exopolyphosphatase" [Vibr 0.414 0.43 0.283 2.3e-24
TIGR_CMR|VC_0722500 VC_0722 "exopolyphosphatase" [ 0.414 0.43 0.283 2.3e-24
UNIPROTKB|P0AFL6513 ppx "exopolyphosphatase monome 0.425 0.430 0.268 2.6e-23
TIGR_CMR|SO_2185518 SO_2185 "exopolyphosphatase" [ 0.427 0.428 0.277 1.1e-21
UNIPROTKB|P25552494 gpp "Gpp" [Escherichia coli K- 0.425 0.447 0.275 5.5e-19
TIGR_CMR|SO_0408306 SO_0408 "guanosine-5-triphosph 0.418 0.709 0.243 6.2e-18
UNIPROTKB|Q9KV53497 gppA "Guanosine-5'-triphosphat 0.423 0.442 0.258 8.5e-16
TIGR_CMR|VC_0304497 VC_0304 "guanosine-5'-triphosp 0.423 0.442 0.258 8.5e-16
UNIPROTKB|Q74A32513 gppA-2 "PppGpp 5'-phosphohydro 0.658 0.666 0.245 8.7e-16
UNIPROTKB|Q87UP7 ppx "Exopolyphosphatase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
 Score = 226 (84.6 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
 Identities = 63/236 (26%), Positives = 114/236 (48%)

Query:    13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLXXXXXXXXXXXXXXVESL 72
             +L A+ID+G++SF +++ +A   G+   ++ L + V L   +              ++ L
Sbjct:    10 SLIAAIDLGSNSFHMVVAKAN-QGEIRILERLGEKVQLAAGIDEERQLTEESMQRGLDCL 68

Query:    73 LMFRDIIQSHNISRDHXXXXXXXXXXXXENKDEFVECVREKVGFEVDVLTGEQEAKFVYM 132
               F  +I  + +                 N+++F+    E +G  V+V++G +EA+ +Y+
Sbjct:    69 KRFAQLI--NGLPPGAVRIVGTNALREARNRNDFIHRAEEILGHPVEVISGREEARLIYL 126

Query:   133 GVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNFEEV 192
             GV   L       L  DIGGGSTEF+IG+R + +  ES+ +G VS ++++    G     
Sbjct:   127 GVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFR-DGKVTPA 185

Query:   193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAV-VSGYDRDFVDNVG 247
                + Y    +    +   +    ++ A+GSSGTIRAI  A+  +GY    V+  G
Sbjct:   186 RYAQAYTAARLEIMSIEHALHRLKWDEAIGSSGTIRAIGLALKANGYGAGEVNAEG 241
GO:0004309 "exopolyphosphatase activity" evidence=ISS
GO:0006793 "phosphorus metabolic process" evidence=ISS
UNIPROTKB|Q9KU08 ppx "Exopolyphosphatase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0722 VC_0722 "exopolyphosphatase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P0AFL6 ppx "exopolyphosphatase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2185 SO_2185 "exopolyphosphatase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P25552 gpp "Gpp" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0408 SO_0408 "guanosine-5-triphosphate,3-diphosphate pyrophosphatase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV53 gppA "Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0304 VC_0304 "guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q74A32 gppA-2 "PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1LOW CONFIDENCE prediction!
3rd Layer3.6.1.40LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.133.183.1
hypothetical protein (495 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.135950002
Predicted protein (175 aa)
• •   • 0.522
eugene3.143650001
hypothetical protein (163 aa)
      • 0.459
eugene3.164370001
Bacterial phosphate transport system-like permease; Part of a binding-protein-dependent transpo [...] (277 aa)
•     • 0.428

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
COG0248492 COG0248, GppA, Exopolyphosphatase [Nucleotide tran 2e-96
TIGR03706300 TIGR03706, exo_poly_only, exopolyphosphatase 2e-60
PRK11031496 PRK11031, PRK11031, guanosine pentaphosphate phosp 2e-40
pfam02541285 pfam02541, Ppx-GppA, Ppx/GppA phosphatase family 2e-39
PRK10854513 PRK10854, PRK10854, exopolyphosphatase; Provisiona 4e-35
>gnl|CDD|223326 COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information 
 Score =  300 bits (770), Expect = 2e-96
 Identities = 155/485 (31%), Positives = 250/485 (51%), Gaps = 56/485 (11%)

Query: 14  LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLL 73
             A+ID+G++SF+L++    P G F  +   K+ V LG  L ++ ++S ++  R++ +L 
Sbjct: 4   RVAAIDLGSNSFRLVVAEITP-GSFQVLFREKRIVRLGEGLDATGNLSEEAIERALSALK 62

Query: 74  MFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMG 133
            F +++       +  R VAT+A+R A N DEF+  V +++G  ++V++GE+EA+ +Y+G
Sbjct: 63  RFAELLDGFGA--EEVRVVATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLG 120

Query: 134 VLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSG-NFEEV 192
           V   LP      L +DIGGGSTE V+G   ++    S+ LG V L+E+F      + E  
Sbjct: 121 VASTLPRKGD-GLVIDIGGGSTELVLGDNFEIGLLISLPLGCVRLTERFFPDDPISEENF 179

Query: 193 LKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEK--AVVSGYDRDFVDNVGDFG 250
            K R+ VR  + E    ++ + +G+   VG+SGTIRA+ K       Y    +       
Sbjct: 180 AKARDAVREELEEI--AKEYRIAGWAGLVGTSGTIRALAKLHMAQGSYPLRVLHGY---- 233

Query: 251 GCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFF---KRRSEFIVAGAVLLDEIFEL 307
                  ++  EL+ ++ERL       +    R +     K R++ I+AGA +L+ +FE 
Sbjct: 234 ------EITAEELEKLLERLI-----RMTSEERLKLEGLSKDRADVILAGAAILEAVFEA 282

Query: 308 LGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFN----NKKRVKAG 363
           L IE M VS  GL EGV+ D L +         + R RS++ LA+R+       KRV   
Sbjct: 283 LSIERMIVSDGGLREGVLYDLLLR-----FEAEDIRKRSLLELALRYLIDLAQAKRVA-- 335

Query: 364 AQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQ 423
                         +   +L++  + L+   E+ +   LEAA +LH IG   S  G+HK 
Sbjct: 336 --------------KLALELFDQLLALLKIDEEAEERLLEAAAMLHEIGLNISHSGHHKH 381

Query: 424 SCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVR 483
           S +II N D L G+S +E  L+ALL R+HRK       A    F ++  +  R L  ++R
Sbjct: 382 SAYIIRNSD-LPGFSHEERLLLALLARYHRKAVKLKKLA---PFSKKKLKSVRRLLGLLR 437

Query: 484 LSVIL 488
           L+VIL
Sbjct: 438 LAVIL 442

Length = 492
>gnl|CDD|234320 TIGR03706, exo_poly_only, exopolyphosphatase Back     alignment and domain information
>gnl|CDD|236826 PRK11031, PRK11031, guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|202276 pfam02541, Ppx-GppA, Ppx/GppA phosphatase family Back     alignment and domain information
>gnl|CDD|182781 PRK10854, PRK10854, exopolyphosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 519
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 100.0
PRK10854513 exopolyphosphatase; Provisional 100.0
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 100.0
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 100.0
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 100.0
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.68
PF01150434 GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) fami 99.02
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 98.77
KOG1386501 consensus Nucleoside phosphatase [Nucleotide trans 98.63
KOG1385453 consensus Nucleoside phosphatase [Nucleotide trans 98.57
PF01966122 HD: HD domain; InterPro: IPR006674 This domain is 98.43
PRK09472420 ftsA cell division protein FtsA; Reviewed 98.4
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 98.15
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 98.09
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 98.07
cd00077145 HDc Metal dependent phosphohydrolases with conserv 97.97
smart00471124 HDc Metal dependent phosphohydrolases with conserv 97.91
TIGR00295164 conserved hypothetical protein TIGR00295. This set 97.59
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 97.52
TIGR03401228 cyanamide_fam HD domain protein, cyanamide hydrata 97.39
PRK10719475 eutA reactivating factor for ethanolamine ammonia 97.33
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 97.31
PRK13928336 rod shape-determining protein Mbl; Provisional 97.26
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 97.15
PRK13929335 rod-share determining protein MreBH; Provisional 97.04
PRK13930335 rod shape-determining protein MreB; Provisional 96.95
PRK12703339 tRNA 2'-O-methylase; Reviewed 96.9
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 96.81
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 96.69
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 96.67
PRK13927334 rod shape-determining protein MreB; Provisional 96.62
TIGR0027780 HDIG uncharacterized domain HDIG. This domain is f 96.6
COG3294269 HD supefamily hydrolase [General function predicti 96.52
PRK12704520 phosphodiesterase; Provisional 96.52
TIGR03319514 YmdA_YtgF conserved hypothetical protein YmdA/YtgF 96.48
PRK12705508 hypothetical protein; Provisional 96.41
PRK07152342 nadD putative nicotinate-nucleotide adenylyltransf 96.36
TIGR01596177 cas3_HD CRISPR-associated endonuclease Cas3-HD. CR 96.1
PRK00106535 hypothetical protein; Provisional 95.93
PRK10119231 putative hydrolase; Provisional 95.91
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 95.89
TIGR00488158 putative HD superfamily hydrolase of NAD metabolis 95.83
COG1077342 MreB Actin-like ATPase involved in cell morphogene 95.61
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 95.61
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 95.4
COG4820277 EutJ Ethanolamine utilization protein, possible ch 95.28
PTZ00280414 Actin-related protein 3; Provisional 95.22
PRK00227 693 glnD PII uridylyl-transferase; Provisional 95.19
COG4819473 EutA Ethanolamine utilization protein, possible ch 94.95
PRK03381 774 PII uridylyl-transferase; Provisional 94.9
PTZ00004378 actin-2; Provisional 94.86
COG5371549 Golgi nucleoside diphosphatase [Carbohydrate trans 94.71
COG3437360 Response regulator containing a CheY-like receiver 94.63
TIGR02692466 tRNA_CCA_actino tRNA adenylyltransferase. The enzy 94.53
COG1078 421 HD superfamily phosphohydrolases [General function 94.43
PRK05007 884 PII uridylyl-transferase; Provisional 94.38
PRK01759 854 glnD PII uridylyl-transferase; Provisional 93.8
PRK04374 869 PII uridylyl-transferase; Provisional 93.69
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 93.67
PRK00275 895 glnD PII uridylyl-transferase; Provisional 93.67
PRK05092 931 PII uridylyl-transferase; Provisional 93.46
TIGR01693 850 UTase_glnD [Protein-PII] uridylyltransferase. This 93.4
PRK13917344 plasmid segregation protein ParM; Provisional 93.21
PF00370245 FGGY_N: FGGY family of carbohydrate kinases, N-ter 93.19
PTZ00466380 actin-like protein; Provisional 92.87
PRK10885409 cca multifunctional tRNA nucleotidyl transferase/2 92.86
PRK03059 856 PII uridylyl-transferase; Provisional 92.81
PTZ00452375 actin; Provisional 92.53
TIGR03276179 Phn-HD phosphonate degradation operons associated 92.3
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 92.3
TIGR02621844 cas3_GSU0051 CRISPR-associated helicase Cas3, Anae 92.24
COG1418222 Predicted HD superfamily hydrolase [General functi 92.16
COG2206344 c-di-GMP phosphodiesterase class II (HD-GYP domain 92.1
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 92.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 91.65
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 91.47
PTZ00281376 actin; Provisional 91.22
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 91.01
CHL00094621 dnaK heat shock protein 70 90.76
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 90.04
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 89.67
PRK00290627 dnaK molecular chaperone DnaK; Provisional 89.58
COG1940314 NagC Transcriptional regulator/sugar kinase [Trans 89.38
PRK13298417 tRNA CCA-pyrophosphorylase; Provisional 89.1
PRK05183616 hscA chaperone protein HscA; Provisional 88.96
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 88.3
PRK13410668 molecular chaperone DnaK; Provisional 88.02
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 88.01
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 87.94
PRK11678450 putative chaperone; Provisional 87.53
PRK13321256 pantothenate kinase; Reviewed 87.18
COG2844 867 GlnD UTP:GlnB (protein PII) uridylyltransferase [P 87.11
PTZ00400663 DnaK-type molecular chaperone; Provisional 86.83
PLN03184673 chloroplast Hsp70; Provisional 86.56
PF00480179 ROK: ROK family; InterPro: IPR000600 A family of b 86.44
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 86.34
TIGR01353 381 dGTP_triPase deoxyguanosinetriphosphate triphospho 85.87
COG0554499 GlpK Glycerol kinase [Energy production and conver 85.68
PRK01433595 hscA chaperone protein HscA; Provisional 85.06
PRK13480314 3'-5' exoribonuclease YhaM; Provisional 84.53
KOG2517516 consensus Ribulose kinase and related carbohydrate 84.52
PRK01286 336 deoxyguanosinetriphosphate triphosphohydrolase-lik 84.46
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 83.55
PRK00047498 glpK glycerol kinase; Provisional 83.27
PRK13318258 pantothenate kinase; Reviewed 82.84
COG4341186 Predicted HD phosphohydrolase [General function pr 82.81
PRK05318 432 deoxyguanosinetriphosphate triphosphohydrolase-lik 82.69
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 82.66
PRK13411653 molecular chaperone DnaK; Provisional 82.53
PTZ00009653 heat shock 70 kDa protein; Provisional 82.48
PRK01096 440 deoxyguanosinetriphosphate triphosphohydrolase-lik 81.34
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 81.3
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 81.02
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 80.72
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-103  Score=844.32  Aligned_cols=461  Identities=28%  Similarity=0.392  Sum_probs=419.3

Q ss_pred             CCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 010059           11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR   90 (519)
Q Consensus        11 ~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~   90 (519)
                      +.+.+|||||||||+||+|+++.+ +.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+  +|+
T Consensus         4 ~~~~~A~IDIGSNSirL~I~~~~~-~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~F~~~~~~~~v~--~i~   80 (496)
T PRK11031          4 SSSLYAAIDLGSNSFHMLVVREVA-GSIQTLARIKRKVRLAAGLDSDNALSNEAMERGWQCLRLFAERLQDIPPS--QIR   80 (496)
T ss_pred             CCCEEEEEEccccceeEEEEEecC-CceEEeecceeEEEccCCcCcCCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEE
Confidence            456899999999999999999864 78999999999999999999999999999999999999999999999995  799


Q ss_pred             EEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeee
Q 010059           91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES  170 (519)
Q Consensus        91 ~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~S  170 (519)
                      +|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++.. ++++++||||||||+++++++++.+++|
T Consensus        81 ~vATsAvReA~N~~~fl~~i~~~tGl~ievIsG~eEA~l~~~gv~~~l~~~-~~~lviDIGGGStEl~~~~~~~~~~~~S  159 (496)
T PRK11031         81 VVATATLRLAVNADEFLAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGA-DQRLVVDIGGASTELVTGTGAQATSLFS  159 (496)
T ss_pred             EEEeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHhhhhccCCC-CCEEEEEecCCeeeEEEecCCceeeeeE
Confidence            999999999999999999999999999999999999999999999998753 4589999999999999999999999999


Q ss_pred             eehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHHcCCCCccccCCCCC
Q 010059          171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDF  249 (519)
Q Consensus       171 lplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~~~y~~~~~~~~~~~  249 (519)
                      +|+|+||++++|+.++ +++.+..++.+|+++.+.+.  .++++..++..+||+|||+++++++.... .          
T Consensus       160 l~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~-~----------  226 (496)
T PRK11031        160 LSMGCVTWLERYFKDRNLTQENFDAAEKAAREVLRPV--ADELREHGWQVCVGASGTVQALQEIMMAQ-G----------  226 (496)
T ss_pred             EeccchHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEChHHHHHHHHHHhc-C----------
Confidence            9999999999998764 57777888999999999743  44555556667999999999999875321 1          


Q ss_pred             CCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHHH
Q 010059          250 GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSL  329 (519)
Q Consensus       250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~glreGll~~~l  329 (519)
                         .+ ..++.++++++++++..++.+  ++.+++||+++|+|+|+||++|+.++|+.+++++++||++|||||++++++
T Consensus       227 ---~~-~~i~~~~l~~l~~~l~~~~~~--~~~~~~gl~~~Radii~~g~~Il~~i~~~~~~~~i~vs~~glREGl~~~~~  300 (496)
T PRK11031        227 ---MD-ERITLAKLQQLKQRAIQCGRL--EELEIEGLTLERALVFPSGLAILIAIFEELNIESMTLAGGALREGLVYGML  300 (496)
T ss_pred             ---CC-CcCCHHHHHHHHHHHhcCCHH--HHhcCCCCCccHHHHHHHHHHHHHHHHHHcCcCEEEECCchHHHHHHHHHH
Confidence               11 248999999999999999987  899999999999999999999999999999999999999999999999998


Q ss_pred             hhhcCCCCCcchhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhh
Q 010059          330 AKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLH  409 (519)
Q Consensus       330 ~~~~~~~~~~~~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~Lh  409 (519)
                      .+..     ..|++..|+.+++.||++|+  .|+++|+++|.+|||+|++.|+           ++++++.||++||+||
T Consensus       301 ~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~v~~~a~~Lf~~l~~~~~-----------l~~~~~~LL~~Aa~Lh  362 (496)
T PRK11031        301 HLPV-----EQDIRSRTLRNIQRRFQIDT--EQAQRVAKLADNFLQQVENEWH-----------LEPRSRELLISACQLH  362 (496)
T ss_pred             hhhc-----ccchHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHHHhhhhhcC-----------CChHHHHHHHHHHHHH
Confidence            7631     24777889999999999986  8999999999999999999998           4567899999999999


Q ss_pred             hhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhc
Q 010059          410 NIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQ  489 (519)
Q Consensus       410 diG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld  489 (519)
                      |||++||+++||+||||||+|++ ++||||+|+.+||.+++||+|+.|+..++.+..|+++   .+++|++|||||++||
T Consensus       363 diG~~I~~~~~~~Hs~yiI~~s~-l~G~s~~E~~~iA~i~~~h~k~~~~~~~~~~~~l~~~---~v~~L~~iLRLA~~Ld  438 (496)
T PRK11031        363 EIGLSVDFKQAPQHAAYLVRNLD-LPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNALPPR---VAERLCRLLRLAIIFA  438 (496)
T ss_pred             hcCCccCCCccchHHHHHHhcCC-CCCCCHHHHHHHHHHHHHhcCCCchhhhhhhhccCHH---HHHHHHHHHHHHHHhc
Confidence            99999999999999999999998 9999999999999999999999887777777778766   5999999999999999


Q ss_pred             c-ccCCCCcceEEEEeCCEEEEEecCCC
Q 010059          490 Q-NDCVNLRGVDFFHSYEGFKLDGHPPF  516 (519)
Q Consensus       490 ~-s~~~~i~~i~~~~~~~~~~l~~~~~~  516 (519)
                      + ++.++|+++++.++++.++|.+++.|
T Consensus       439 ~~~~~~~i~~~~~~~~~~~l~l~~~~~~  466 (496)
T PRK11031        439 SRRRDDLLPEVTLQANDELLTLTLPQGW  466 (496)
T ss_pred             cccCCCCCCceEEEEeCCEEEEEEChhh
Confidence            4 56889999999998889999998776

>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>PF01150 GDA1_CD39: GDA1/CD39 (nucleoside phosphatase) family; InterPro: IPR000407 A number of nucleoside diphosphate and triphosphate hydrolases as well as some yet uncharacterised proteins have been found to belong to the same family [, ] Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>KOG1386 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1385 consensus Nucleoside phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity [] Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif Back     alignment and domain information
>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif Back     alignment and domain information
>TIGR00295 conserved hypothetical protein TIGR00295 Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>TIGR03401 cyanamide_fam HD domain protein, cyanamide hydratase family Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PRK12703 tRNA 2'-O-methylase; Reviewed Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00277 HDIG uncharacterized domain HDIG Back     alignment and domain information
>COG3294 HD supefamily hydrolase [General function prediction only] Back     alignment and domain information
>PRK12704 phosphodiesterase; Provisional Back     alignment and domain information
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF Back     alignment and domain information
>PRK12705 hypothetical protein; Provisional Back     alignment and domain information
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated Back     alignment and domain information
>TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD Back     alignment and domain information
>PRK00106 hypothetical protein; Provisional Back     alignment and domain information
>PRK10119 putative hydrolase; Provisional Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>TIGR00488 putative HD superfamily hydrolase of NAD metabolism Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>PRK00227 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>PRK03381 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>COG5371 Golgi nucleoside diphosphatase [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>TIGR02692 tRNA_CCA_actino tRNA adenylyltransferase Back     alignment and domain information
>COG1078 HD superfamily phosphohydrolases [General function prediction only] Back     alignment and domain information
>PRK05007 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK01759 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK04374 PII uridylyl-transferase; Provisional Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PRK00275 glnD PII uridylyl-transferase; Provisional Back     alignment and domain information
>PRK05092 PII uridylyl-transferase; Provisional Back     alignment and domain information
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PF00370 FGGY_N: FGGY family of carbohydrate kinases, N-terminal domain; InterPro: IPR018484 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>PRK10885 cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed Back     alignment and domain information
>PRK03059 PII uridylyl-transferase; Provisional Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>TIGR02621 cas3_GSU0051 CRISPR-associated helicase Cas3, Anaes-subtype Back     alignment and domain information
>COG1418 Predicted HD superfamily hydrolase [General function prediction only] Back     alignment and domain information
>COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13298 tRNA CCA-pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13321 pantothenate kinase; Reviewed Back     alignment and domain information
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames [] Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>TIGR01353 dGTP_triPase deoxyguanosinetriphosphate triphosphohydrolase, putative Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PRK13480 3'-5' exoribonuclease YhaM; Provisional Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01286 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PRK13318 pantothenate kinase; Reviewed Back     alignment and domain information
>COG4341 Predicted HD phosphohydrolase [General function prediction only] Back     alignment and domain information
>PRK05318 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK01096 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1u6z_A513 Structure Of An E. Coli Exopolyphosphatase: Insight 3e-24
2flo_A524 Crystal Structure Of Exopolyphosphatase (Ppx) From 1e-20
3mdq_A315 Crystal Structure Of An Exopolyphosphatase (Chu_031 5e-14
2j4r_A308 Structural Study Of The Aquifex Aeolicus Ppx-Gppa E 4e-11
1t6d_A315 Miras Phasing Of The Aquifex Aeolicus PpxGPPA PHOSP 6e-11
1t6c_A315 Structural Characterization Of The PpxGPPA PROTEIN 8e-11
3cer_A343 Crystal Structure Of The Exopolyphosphatase-Like Pr 2e-08
3rf0_A209 Crystal Structure Of Exopolyphosphatase From Yersin 3e-04
>pdb|1U6Z|A Chain A, Structure Of An E. Coli Exopolyphosphatase: Insight Into The Processive Hydrolysis Of Polyphosphate And Its Regulation Length = 513 Back     alignment and structure 
Iteration: 1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 213/486 (43%), Gaps = 58/486 (11%)
Query: 11  PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLXXXXXXXXXXXXXXVE 70
           PQ  FA++D+G++SF ++I R   +G    I  LKQ V L   L              + 
Sbjct: 10  PQE-FAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLN 67
Query: 71  SLLMFRDIIQSHNISRDHXXXXXXXXXXXXENKDEFVECVREKVGFEVDVLTGEQEAKFV 130
            L +F + +Q    S                N  +F++   + + + +++++G +EA+ +
Sbjct: 68  CLSLFAERLQG--FSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLI 125
Query: 131 YMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF---GTCSG 187
           +MGV    P   R  L +DIGGGSTE VIG+  + +  ES  +G VS ++ +   G  + 
Sbjct: 126 FMGVEHTQPEKGR-KLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINK 184
Query: 188 NFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVG 247
              +  +M    ++  L +    + +  G+ VA+G+SGTI+A  + ++   ++D +    
Sbjct: 185 ENFQRARMAAAQKLETLTW----QFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPE 240
Query: 248 DFGGCKRDWRLSRG----ELKGIVERLCCGGDGXXXXXXXXXXXXXXXXXIVAGAVLLDE 303
                 ++    R      L G+ E                          V G  +L  
Sbjct: 241 RLEKLVKEVLRHRNFASLSLPGLSEE--------------------RKTVFVPGLAILCG 280
Query: 304 IFELLGIEEMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAG 363
           +F+ L I E+ +S   L EGV+ +      +G   + + R R+   LA +++     +  
Sbjct: 281 VFDALAIRELRLSDGALREGVLYE-----MEGRFRHQDVRSRTASSLANQYHIDS--EQA 333
Query: 364 AQCASIAKDIFEGLR-KCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHK 422
            +       ++E  R +  KL + Q++ +          L  A +LH +G   +  G H+
Sbjct: 334 RRVLDTTMQMYEQWREQQPKLAHPQLEAL----------LRWAAMLHEVGLNINHSGLHR 383
Query: 423 QSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIV 482
            S +I+ N D L G++ ++  ++A L R+HRK         L  F    K++F  L  ++
Sbjct: 384 HSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDD---LPRFTLFKKKQFLPLIQLL 439
Query: 483 RLSVIL 488
           RL V+L
Sbjct: 440 RLGVLL 445
>pdb|2FLO|A Chain A, Crystal Structure Of Exopolyphosphatase (Ppx) From E. Coli O157:h7 Length = 524 Back     alignment and structure
>pdb|3MDQ|A Chain A, Crystal Structure Of An Exopolyphosphatase (Chu_0316) From Cytophaga Hutchinsonii Atcc 33406 At 1.50 A Resolution Length = 315 Back     alignment and structure
>pdb|2J4R|A Chain A, Structural Study Of The Aquifex Aeolicus Ppx-Gppa Enzyme Length = 308 Back     alignment and structure
>pdb|1T6D|A Chain A, Miras Phasing Of The Aquifex Aeolicus PpxGPPA PHOSPHATASE: CRYSTAL Structure Of The Type Ii Variant Length = 315 Back     alignment and structure
>pdb|1T6C|A Chain A, Structural Characterization Of The PpxGPPA PROTEIN FAMILY: CRYSTAL Structure Of The Aquifex Aeolicus Family Member Length = 315 Back     alignment and structure
>pdb|3CER|A Chain A, Crystal Structure Of The Exopolyphosphatase-Like Protein Q8g5j2. Northeast Structural Genomics Consortium Target Blr13 Length = 343 Back     alignment and structure
>pdb|3RF0|A Chain A, Crystal Structure Of Exopolyphosphatase From Yersinia Pestis Length = 209 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 1e-130
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 1e-110
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 7e-80
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 1e-77
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 5e-77
3rf0_A209 Exopolyphosphatase; structural genomics, center fo 1e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Length = 513 Back     alignment and structure
 Score =  387 bits (996), Expect = e-130
 Identities = 113/500 (22%), Positives = 215/500 (43%), Gaps = 47/500 (9%)

Query: 14  LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLL 73
            FA++D+G++SF ++I R   +G    I  LKQ V L   L     +S ++  R +  L 
Sbjct: 12  EFAAVDLGSNSFHMVIAR-VVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLS 70

Query: 74  MFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMG 133
           +F + +Q  +        V T  +R A N  +F++   + + + +++++G +EA+ ++MG
Sbjct: 71  LFAERLQGFSP--ASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMG 128

Query: 134 VLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFGTCSGNF--EE 191
           V    P   R  L +DIGGGSTE VIG+  + +  ES  +G VS ++ +    G    E 
Sbjct: 129 VEHTQPEKGR-KLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFP-GGVINKEN 186

Query: 192 VLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVSGYDRDFVDNVGDFGG 251
             + R      +       + +  G+ VA+G+SGTI+A  + ++   +            
Sbjct: 187 FQRARMAAAQKLETL--TWQFRIQGWNVAMGASGTIKAAHEVLMEMGE------------ 232

Query: 252 CKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIE 311
             +D  ++   L+ +V+ +          +      + R    V G  +L  +F+ L I 
Sbjct: 233 --KDGIITPERLEKLVKEVL--RHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIR 288

Query: 312 EMEVSGYGLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFN-NKKRVKAGAQCASIA 370
           E+ +S   L EGV+ +   +       + + R R+   LA +++ + ++     +     
Sbjct: 289 ELRLSDGALREGVLYEMEGR-----FRHQDVRSRTASSLANQYHIDSEQ---ARRVLDTT 340

Query: 371 KDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMN 430
             ++E  R+                 +    L  A +LH +G   +  G H+ S +I+ N
Sbjct: 341 MQMYEQWREQQPK---------LAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQN 391

Query: 431 GDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490
            D L G++ ++  ++A L R+HRK            F    K++F  L  ++RL V+L  
Sbjct: 392 SD-LPGFNQEQQLMMATLVRYHRKAIKLDDL---PRFTLFKKKQFLPLIQLLRLGVLLNN 447

Query: 491 NDCVNLRGVDFFHSYEGFKL 510
                          +    
Sbjct: 448 QRQATTTPPTLTLITDDSHW 467
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Length = 508 Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Length = 315 Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Length = 343 Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Length = 315 Back     alignment and structure
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis} Length = 209 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 100.0
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 100.0
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 100.0
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 100.0
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 100.0
3rf0_A209 Exopolyphosphatase; structural genomics, center fo 100.0
3aap_A353 Ectonucleoside triphosphate diphosphohydrolase I; 99.96
3cj1_A456 Ectonucleoside triphosphate diphosphohydrolase 2; 99.92
3zx3_A452 Ectonucleoside triphosphate diphosphohydrolase 1; 99.83
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.73
4a57_A611 Nucleoside-triphosphatase 1; hydrolase; 2.00A {Tox 98.37
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 98.24
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 98.18
2pq7_A220 Predicted HD superfamily hydrolase; 104161995, HD 97.76
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 97.31
3tm8_A328 BD1817, uncharacterized protein; HD-GYP, phosphodi 97.27
3b57_A209 LIN1889 protein; Q92AN1, X-RAY, NESG, structural g 97.07
3ccg_A190 HD superfamily hydrolase; NP_347894.1, HD domain, 97.0
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 96.91
3dto_A223 BH2835 protein; all alpha-helical protein, structu 96.87
2qgs_A225 Protein Se1688; alpha-helical protein, structural 96.86
2o08_A188 BH1327 protein; putative HD superfamily hydrolase, 96.85
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 96.85
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 96.83
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 96.78
2pjq_A231 Uncharacterized protein LP_2664; LPR71, NESG, stru 96.78
2ogi_A196 Hypothetical protein SAG1661; structural genomics, 96.65
3djb_A223 Hydrolase, HD family; all alpha-helical protein., 96.57
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 96.53
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 96.12
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 96.01
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 95.87
3gw7_A239 Uncharacterized protein YEDJ; all alpha-helical pr 95.51
2qm1_A326 Glucokinase; alpha-beta structure, putative helix- 95.33
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 95.27
3hc1_A305 Uncharacterized HDOD domain protein; HDOD domain p 94.96
2q14_A 410 Phosphohydrolase; BT4208, HD domain, structural ge 94.94
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 94.63
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 94.51
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 94.44
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 94.4
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 94.12
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 93.8
3u1n_A 528 SAM domain and HD domain-containing protein 1; deo 93.71
3irh_A 480 HD domain protein; phosphohydrolase, dntpase, stru 93.56
2hek_A 371 Hypothetical protein; predominantly alpha helical 93.51
1zc6_A305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 93.46
3js6_A355 Uncharacterized PARM protein; partition, segregati 93.42
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 93.25
3sk9_A265 Putative uncharacterized protein TTHB187; crispr, 92.49
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 92.43
3i7a_A281 Putative metal-dependent phosphohydrolase; YP_9268 92.18
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 91.72
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 91.6
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 91.36
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 91.23
1vqr_A297 Hypothetical protein CJ0248; HD-domain/pdease-like 90.96
2dqb_A 376 Deoxyguanosinetriphosphate triphosphohydrolase, P; 90.4
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 90.11
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 90.1
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 89.89
3zyy_X631 Iron-sulfur cluster binding protein; iron-sulfur-b 89.63
2hoe_A380 N-acetylglucosamine kinase; TM1224, structural gen 89.28
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 86.48
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 86.09
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 85.38
1z05_A429 Transcriptional regulator, ROK family; structural 85.33
3mem_A457 Putative signal transduction protein; structural g 83.84
3bg2_A 444 DGTP triphosphohydrolase; structural genomics, NYS 83.41
1z6r_A406 MLC protein; transcriptional repressor, ROK family 83.18
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 82.84
1saz_A381 Probable butyrate kinase 2; askha (acetate and sug 82.79
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 82.49
2pgs_A 451 Putative deoxyguanosinetriphosphate triphosphohyd; 82.41
3m1t_A275 Putative phosphohydrolase; structural genomics, jo 82.07
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 80.75
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 80.29
3ljx_A288 MMOQ response regulator; structural genomics, PSI- 80.22
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-102  Score=839.36  Aligned_cols=471  Identities=24%  Similarity=0.387  Sum_probs=420.2

Q ss_pred             CCcccccccCCCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Q 010059            1 MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQ   80 (519)
Q Consensus         1 ~~~~~~~~~~~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~   80 (519)
                      |..+.|+|  +++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|+
T Consensus         1 ~~~~~~~~--~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~   77 (513)
T 1u6z_A            1 MPIHDKSP--RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQ   77 (513)
T ss_dssp             -------------CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccccCc--cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHH
Confidence            34334433  34569999999999999999997 5789999999999999999999999999999999999999999999


Q ss_pred             HcCCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEe
Q 010059           81 SHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG  160 (519)
Q Consensus        81 ~~~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~  160 (519)
                      +|+|+  +|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||++++
T Consensus        78 ~~~v~--~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~  154 (513)
T 1u6z_A           78 GFSPA--SVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIG  154 (513)
T ss_dssp             TCCGG--GEEEEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEE
T ss_pred             hCCCC--EEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEE
Confidence            99995  7999999999999999999999999999999999999999999999999987543 68999999999999999


Q ss_pred             eCCeEeeeeeeehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHHc-CC
Q 010059          161 KRGKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GY  238 (519)
Q Consensus       161 ~~~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~~-~y  238 (519)
                      +++++...+|+|+|||+++++|+.++ ++..++.++++++++.+.+..+  .++..++..+||+|||+++++++... .|
T Consensus       155 ~~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~i~~~~~~  232 (513)
T 1u6z_A          155 ENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTW--QFRIQGWNVAMGASGTIKAAHEVLMEMGE  232 (513)
T ss_dssp             ETTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTHH--HHHHHCCSEEEEESHHHHHHHHHHHHTTC
T ss_pred             eCCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHH--HhhhcCCCEEEEEChHHHHHHHHHHhCCC
Confidence            99999999999999999999998764 6888889999999999976532  23334666799999999999998643 45


Q ss_pred             CCccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCc
Q 010059          239 DRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGY  318 (519)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~  318 (519)
                      +.              + .++.+++.++++++..++.+  ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.
T Consensus       233 ~~--------------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~  295 (513)
T 1u6z_A          233 KD--------------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDG  295 (513)
T ss_dssp             SS--------------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSC
T ss_pred             CC--------------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence            41              1 59999999999999999988  8999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHhhhcCCCCCcchhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcch
Q 010059          319 GLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKD  398 (519)
Q Consensus       319 glreGll~~~l~~~~~~~~~~~~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~  398 (519)
                      |||||++++++.+..     ..|++.+|+.++++||++|+  .|+++|+++|++|||+|++.|++.         .++++
T Consensus       296 glreGll~~~~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~---------~~~~~  359 (513)
T 1u6z_A          296 ALREGVLYEMEGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKL---------AHPQL  359 (513)
T ss_dssp             CHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGG---------CCHHH
T ss_pred             cHHHHHHHHHHHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcC---------CChhH
Confidence            999999999987632     23788899999999999986  999999999999999999998731         13456


Q ss_pred             HHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHH
Q 010059          399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVL  478 (519)
Q Consensus       399 ~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L  478 (519)
                      ++||+|||+||||||+||+++||+||+|||+|++ ++||||+||.+||.+++||+++.|+..++.+..|++   +.+++|
T Consensus       360 ~~lL~~Aa~LhdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L  435 (513)
T 1u6z_A          360 EALLRWAAMLHEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPL  435 (513)
T ss_dssp             HHHHHHHHHHTTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHH
T ss_pred             HHHHHHHHHHHHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCH---HHHHHH
Confidence            7999999999999999999999999999999998 999999999999999999999999866566688886   258999


Q ss_pred             HHHHHhhHHhccccCCC-Ccc-eEEEEeCCEEEEEecCCC
Q 010059          479 CAIVRLSVILQQNDCVN-LRG-VDFFHSYEGFKLDGHPPF  516 (519)
Q Consensus       479 ~aiLRlA~~Ld~s~~~~-i~~-i~~~~~~~~~~l~~~~~~  516 (519)
                      ++|||||++||++|.+. +++ ++++.++++++|+++..|
T Consensus       436 ~~iLRlA~~Ld~~~~~~~i~~~~~~~~~~~~l~l~~~~~~  475 (513)
T 1u6z_A          436 IQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDW  475 (513)
T ss_dssp             HHHHHHHHHTTTTGGGCCCCSCCEEEEETTEEEEEECTTG
T ss_pred             HHHHHHHHHhccccCCCCCCCeeEEEEECCEEEEEEcCcc
Confidence            99999999999999888 999 999999999999998775
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis} Back     alignment and structure
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A* Back     alignment and structure
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A* Back     alignment and structure
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A* Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1 Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A Back     alignment and structure
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1 Back     alignment and structure
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1 Back     alignment and structure
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1 Back     alignment and structure
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1 Back     alignment and structure
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1 Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12} Back     alignment and structure
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis} Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens} Back     alignment and structure
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens} Back     alignment and structure
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A* Back     alignment and structure
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1 Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A Back     alignment and structure
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B} Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3 Back     alignment and structure
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans} Back     alignment and structure
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 Back     alignment and structure
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei} Back     alignment and structure
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis} Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A* Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV} Back     alignment and structure
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0 Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 519
d1u6za1197 a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-ter 7e-28
d1u6za2124 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escher 2e-25
d1t6ca1126 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex 5e-25
d1t6ca2180 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquif 6e-25
d1u6za3177 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Esche 6e-24
d3dtoa1212 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 0.004
>d1u6za1 a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-terminal domain {Escherichia coli [TaxId: 562]} Length = 197 Back     information, alignment and structure

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: Ppx associated domain
domain: Exopolyphosphatase Ppx C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  108 bits (270), Expect = 7e-28
 Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 341 NARWRSVVRLAMRFN-NKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL 399
           + R R+   LA +++ + ++ +   +       ++E  R+      +          +  
Sbjct: 1   DVRSRTASSLANQYHIDSEQAR---RVLDTTMQMYEQWREQQPKLAH---------PQLE 48

Query: 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRS 459
             L  A +LH +G   +  G H+ S +I+ N D L G++ ++  ++A L R+HRK     
Sbjct: 49  ALLRWAAMLHEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLD 107

Query: 460 HHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLRGVDFFHSYEGFKL 510
                  F    K++F  L  ++RL V+L                 +    
Sbjct: 108 DL---PRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHW 155
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Length = 124 Back     information, alignment and structure
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Length = 126 Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Length = 180 Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Length = 177 Back     information, alignment and structure
>d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} Length = 212 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
d1u6za1197 Exopolyphosphatase Ppx C-terminal domain {Escheric 100.0
d1t6ca1126 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 100.0
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 100.0
d1u6za2124 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 100.0
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 100.0
d2pq7a1217 Predicted hydrolase mes0020 {Uncultured thermotoga 97.28
d2pjqa1215 Uncharacterized protein LP2664 {Lactobacillus plan 97.21
d3b57a1201 Uncharacterized protein Lin1889 {Listeria innocua 97.21
d3dtoa1212 Uncharacterized protein BH2835 {Bacillus haloduran 97.2
d2qgsa1216 Uncharacterized protein SE1688 {Staphylococcus epi 97.07
d3djba1213 Uncharacterized protein BT9727_1981 {Bacillus thur 96.92
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 96.62
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 95.57
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 94.13
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 93.66
d2o6ia1 453 Hypothetical protein EF1143 {Enterococcus faecalis 93.42
d2heka1 369 Hypothetical protein aq_1910 {Aquifex aeolicus [Ta 92.88
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 91.89
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 90.86
d2p3ra1252 Glycerol kinase {Escherichia coli [TaxId: 562]} 90.84
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 86.0
d1z05a3128 Transcriptional regulator VC2007 {Vibrio cholerae 84.1
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 80.62
>d1u6za1 a.211.1.5 (A:313-509) Exopolyphosphatase Ppx C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: Ppx associated domain
domain: Exopolyphosphatase Ppx C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.3e-37  Score=286.93  Aligned_cols=161  Identities=21%  Similarity=0.338  Sum_probs=143.2

Q ss_pred             hhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCch
Q 010059          341 NARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGY  420 (519)
Q Consensus       341 ~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h  420 (519)
                      |+|.+|+.+++.||++|.  +||++|+++|+.|||+|++.|+++         .+++++.||+|||+|||||++||+++|
T Consensus         1 D~R~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lfd~l~~~~~~~---------~~~~~~~lL~~AA~LHeiG~~I~~~~~   69 (197)
T d1u6za1           1 DVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKL---------AHPQLEALLRWAAMLHEVGLNINHSGL   69 (197)
T ss_dssp             CHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGG---------CCHHHHHHHHHHHHHTTTTTTTCSTTH
T ss_pred             ChHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhcCcc---------cCHHHHHHHHHHHHHHhcCcccCCccH
Confidence            578899999999999987  999999999999999999998753         244678999999999999999999999


Q ss_pred             hhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccccCCCCc--c
Q 010059          421 HKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVNLR--G  498 (519)
Q Consensus       421 ~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s~~~~i~--~  498 (519)
                      |+||+|||.|++ ++||||+|+.+||.+|+||||+.|+...+.+..++   +..+.+|++|||||++||+++.+.+.  .
T Consensus        70 hkHs~Yii~n~~-l~Gfs~~E~~~iA~l~~~hrk~~~~~~~~~~~~~~---~~~~~~l~~iLRLA~~L~~sr~~~~~~~~  145 (197)
T d1u6za1          70 HRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFK---KKQFLPLIQLLRLGVLLNNQRQATTTPPT  145 (197)
T ss_dssp             HHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCC---HHHHHHHHHHHHHHHHTTTTGGGCCCCSC
T ss_pred             HHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCCcccccccchhh---HHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence            999999999998 99999999999999999999999986666555555   45678899999999999999988876  4


Q ss_pred             eEEEEeCCEEEEEecCCC
Q 010059          499 VDFFHSYEGFKLDGHPPF  516 (519)
Q Consensus       499 i~~~~~~~~~~l~~~~~~  516 (519)
                      +.+..+++.++|+++.+|
T Consensus       146 ~~~~~~~~~l~l~~~~~~  163 (197)
T d1u6za1         146 LTLITDDSHWTLRFPHDW  163 (197)
T ss_dssp             CEEEEETTEEEEEECTTG
T ss_pred             ceEeeCCCEEEEEeCCcc
Confidence            666667889999988876
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]} Back     information, alignment and structure
>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]} Back     information, alignment and structure
>d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]} Back     information, alignment and structure
>d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure