Citrus Sinensis ID: 010067

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52
MQASPAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
ccccccccccccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEEEEEEEccccccccccHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccHHHHHHHcccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccEEEEccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcEEEEcccccccHHHHHcccccccccccHHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHcccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccc
cccccccccccccHHHHcccEEEEcccccEcccccEccHHHHHHHHHHHHHccccEEEEEEEHHHHccccccccccHHHHHHHHHHHHcccEEEEEEEcccEcccccccccEcccHHHHHHHHHcHHHEEEcccccEEEEEEcHHHcccccEccEcHHHHHHHHHHHHHHHcHHHHHcccEEEEEEcccHHHEcccccccHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHccccEccEcccHHHHHHHHHcccEEEEccccccHHHccHHHcccHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccHHHHcccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcc
mqaspaaltydekmlpnyvpIYVMLplgvitndnvledKDKLESQLKELKAAGVDGIMVDVWWGiieskgprqydwSAYRSLFELIQQYELKLQAIMSFHQcggnvgdvvtipipkwvleigetnpdifytnrsgnrnkeyltigvdhkplfdgrtAIEIYSDYMKSFRKNMFDFLEAGVIIdievglgpagelrypsypesqgwvfpgigefqcYDKYLKAEFKEaatasghpewelpdnagtyndkpesteffktngtylSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAgyynlndrdgyrPIARILSRHYGILNFTCLEMRNSEQdaaakcgpqELVQQVLSGGWRENIEVAGENALSRYDATAYNQILlnarpngvnkegppklrmYGVTYLRLSDDLLAENNFKIFKIFVKKmhadqdycpdpqkynheidplerskpkfsneELMEATKkllpfpwdeetdmnvggTRGILAALFGKIFSMFK
mqaspaaltydekmlPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELkaagvdgimVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETnpdifytnrsgnrnkeyltigvdhkplfdGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAAtasghpewelpdnagtynDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILlnarpngvnkegppKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
MQASPAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNfkifkifvkkMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
********TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAA************************EFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRN*****AAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVN***PPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYC*******************************LLPFPWDEETDMNVGGTRGILAALFGKIFS***
*****************YVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSE*******GPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHAD**************************EELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
********TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
***********EKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
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MQASPAALTYDEKMLPNYVPIYVMLPLGVITxxxxxxxxxxxxxxxxxxxxxGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query519 2.2.26 [Sep-21-2011]
O64407496 Beta-amylase OS=Vigna ung N/A no 0.951 0.995 0.785 0.0
O22585496 Beta-amylase OS=Medicago N/A no 0.951 0.995 0.779 0.0
O65015496 Beta-amylase OS=Trifolium N/A no 0.951 0.995 0.789 0.0
P10538496 Beta-amylase OS=Glycine m yes no 0.951 0.995 0.779 0.0
Q8L762577 Beta-amylase 6 OS=Arabido yes no 0.963 0.866 0.695 0.0
P25853498 Beta-amylase 5 OS=Arabido no no 0.955 0.995 0.694 0.0
P10537499 Beta-amylase OS=Ipomoea b N/A no 0.930 0.967 0.682 0.0
P55005488 Beta-amylase OS=Zea mays N/A no 0.924 0.983 0.668 0.0
P93594503 Beta-amylase OS=Triticum N/A no 0.926 0.956 0.663 0.0
P82993535 Beta-amylase OS=Hordeum v N/A no 0.957 0.928 0.627 0.0
>sp|O64407|AMYB_VIGUN Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1 Back     alignment and function desciption
 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/494 (78%), Positives = 441/494 (89%)

Query: 9   TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIES 68
           + D+ ML NYVP+YVMLPLGV++ +NV ED + L+ QL +L+ AGVDG+MVDVWWGIIE 
Sbjct: 3   SLDKNMLLNYVPVYVMLPLGVVSVNNVFEDPEGLKEQLVQLREAGVDGVMVDVWWGIIEQ 62

Query: 69  KGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDI 128
           KGP+QYDWSAY+SLF+L+Q+  LKLQAIMSFHQCGGNVGDVV IPIP+WVL+IGE++PDI
Sbjct: 63  KGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQWVLDIGESDPDI 122

Query: 129 FYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGL 188
           FYTNRSG R+KEYLTIGVD+KP+F GRTAIE+YSDYMKSFR+NM DFL++ VIIDIEVGL
Sbjct: 123 FYTNRSGTRDKEYLTIGVDNKPIFHGRTAIEVYSDYMKSFRENMSDFLKSEVIIDIEVGL 182

Query: 189 GPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDK 248
           GPAGELRYPSYP++QGWVFPGIGEFQCYDKYLKAEFK AA  +GH EWELPD+AGTYND 
Sbjct: 183 GPAGELRYPSYPQNQGWVFPGIGEFQCYDKYLKAEFKAAAARAGHSEWELPDDAGTYNDV 242

Query: 249 PESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHW 308
           PESTEFFKTNGTYL+E+G FFLTWYSN+L+ HGDEILDEANKAFLGCKV LA KVSGIHW
Sbjct: 243 PESTEFFKTNGTYLTEKGKFFLTWYSNQLLNHGDEILDEANKAFLGCKVNLAIKVSGIHW 302

Query: 309 WYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQE 368
           WY A NHAAELTAGYYNL+DRDGYRPIA+++SRH+  LNFTCLEMR+SEQ + A+ GPQE
Sbjct: 303 WYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQE 362

Query: 369 LVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRL 428
           LVQQVLSGGWRENIEVAGENALSRYDATAYNQI+LNARP GVNK+GPPK RMYGVTYLRL
Sbjct: 363 LVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRL 422

Query: 429 SDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLL 488
           SD+LL ++NF IFK FV KMHADQDYC DPQ+YNH I PL+RS+PK   + L EATK + 
Sbjct: 423 SDELLQQSNFDIFKKFVVKMHADQDYCEDPQEYNHGIPPLKRSEPKIPVDVLNEATKPIP 482

Query: 489 PFPWDEETDMNVGG 502
           PFPWD ETDM V G
Sbjct: 483 PFPWDSETDMKVDG 496

Vigna unguiculata (taxid: 3917)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2
>sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|O65015|AMYB_TRIRP Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|P10538|AMYB_SOYBN Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3 Back     alignment and function description
>sp|Q8L762|BAM6_ARATH Beta-amylase 6 OS=Arabidopsis thaliana GN=BAM6 PE=2 SV=1 Back     alignment and function description
>sp|P25853|BAM5_ARATH Beta-amylase 5 OS=Arabidopsis thaliana GN=BAM5 PE=2 SV=1 Back     alignment and function description
>sp|P10537|AMYB_IPOBA Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4 Back     alignment and function description
>sp|P55005|AMYB_MAIZE Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|P93594|AMYB_WHEAT Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|P82993|AMYB_HORVS Beta-amylase OS=Hordeum vulgare subsp. spontaneum GN=BMY1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
402171768519 beta-amylase 5 [Citrus trifoliata] 1.0 1.0 0.974 0.0
13560977514 beta-amylase [Castanea crenata] 0.990 1.0 0.805 0.0
225447374520 PREDICTED: beta-amylase [Vitis vinifera] 0.961 0.959 0.796 0.0
147785379520 hypothetical protein VITISV_005286 [Viti 0.961 0.959 0.796 0.0
224132954519 predicted protein [Populus trichocarpa] 0.980 0.980 0.774 0.0
297739326508 unnamed protein product [Vitis vinifera] 0.938 0.958 0.802 0.0
255549317518 Beta-amylase, putative [Ricinus communis 0.992 0.994 0.759 0.0
3913034496 RecName: Full=Beta-amylase; AltName: Ful 0.951 0.995 0.785 0.0
3913031496 RecName: Full=Beta-amylase; AltName: Ful 0.951 0.995 0.779 0.0
3913035496 RecName: Full=Beta-amylase; AltName: Ful 0.951 0.995 0.789 0.0
>gi|402171768|gb|AFQ33617.1| beta-amylase 5 [Citrus trifoliata] Back     alignment and taxonomy information
 Score = 1055 bits (2727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/519 (97%), Positives = 513/519 (98%)

Query: 1   MQASPAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVD 60
           MQASPAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDG+MVD
Sbjct: 1   MQASPAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGVMVD 60

Query: 61  VWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLE 120
           VWWGIIESKGP+QYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLE
Sbjct: 61  VWWGIIESKGPKQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLE 120

Query: 121 IGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGV 180
           IGETNPDIFYTNRSGNRNKEYLTIGVDHKPLF GRTAIEIYSDYM+SFR+NM DFLEAGV
Sbjct: 121 IGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFHGRTAIEIYSDYMRSFRENMSDFLEAGV 180

Query: 181 IIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPD 240
           IIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPD
Sbjct: 181 IIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPD 240

Query: 241 NAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLA 300
           NAGTYNDKPESTEFFKTNGTYLSEQG FFLTWYSNKL+FHGDEIL+EANKAFLGCKVKLA
Sbjct: 241 NAGTYNDKPESTEFFKTNGTYLSEQGKFFLTWYSNKLLFHGDEILNEANKAFLGCKVKLA 300

Query: 301 AKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDA 360
           AKVSGIHWWYLADNHAAELTAGYYNLNDRDGYR IARILSRHYGILNFTCLEMR+SEQDA
Sbjct: 301 AKVSGIHWWYLADNHAAELTAGYYNLNDRDGYRSIARILSRHYGILNFTCLEMRDSEQDA 360

Query: 361 AAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRM 420
           AAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRM
Sbjct: 361 AAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRM 420

Query: 421 YGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEEL 480
           YGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSK KFSNEEL
Sbjct: 421 YGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKLKFSNEEL 480

Query: 481 MEATKKLLPFPWDEETDMNVGGTRGILAALFGKIFSMFK 519
           MEATKKL PFPWDEETDMNVGGTRGILAALFGKIFSMFK
Sbjct: 481 MEATKKLPPFPWDEETDMNVGGTRGILAALFGKIFSMFK 519

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|13560977|gb|AAK30294.1|AF353207_1 beta-amylase [Castanea crenata] Back     alignment and taxonomy information
>gi|225447374|ref|XP_002281003.1| PREDICTED: beta-amylase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785379|emb|CAN70833.1| hypothetical protein VITISV_005286 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224132954|ref|XP_002327920.1| predicted protein [Populus trichocarpa] gi|222837329|gb|EEE75708.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297739326|emb|CBI28977.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255549317|ref|XP_002515712.1| Beta-amylase, putative [Ricinus communis] gi|223545149|gb|EEF46659.1| Beta-amylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|3913034|sp|O64407.1|AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase gi|2995395|emb|CAA12395.1| beta amylase [Vigna unguiculata] Back     alignment and taxonomy information
>gi|3913031|sp|O22585.1|AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase gi|2559006|gb|AAD04188.1| beta-amylase [Medicago sativa] Back     alignment and taxonomy information
>gi|3913035|sp|O65015.1|AMYB_TRIRP RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase gi|2935474|gb|AAD04259.1| beta-amylase [Trifolium repens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
TAIR|locus:2062535577 BAM6 "beta-amylase 6" [Arabido 0.963 0.866 0.685 6.8e-198
TAIR|locus:2129810498 BAM5 "beta-amylase 5" [Arabido 0.955 0.995 0.684 5.1e-193
TAIR|locus:2127033542 BAM2 "beta-amylase 2" [Arabido 0.843 0.808 0.513 1.6e-118
TAIR|locus:2130504548 CT-BMY "chloroplast beta-amyla 0.813 0.770 0.487 3.1e-115
TAIR|locus:2076086575 BAM1 "beta-amylase 1" [Arabido 0.803 0.725 0.502 8.2e-115
TAIR|locus:2050720691 BAM7 "beta-amylase 7" [Arabido 0.847 0.636 0.453 5.1e-106
TAIR|locus:2158455689 BMY2 "beta-amylase 2" [Arabido 0.743 0.560 0.434 3.4e-93
TAIR|locus:2162152531 BAM4 "beta-amylase 4" [Arabido 0.816 0.798 0.419 2.9e-87
TAIR|locus:2180029536 BMY3 "beta-amylase 3" [Arabido 0.766 0.742 0.335 2e-65
TAIR|locus:2062535 BAM6 "beta-amylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1916 (679.5 bits), Expect = 6.8e-198, P = 6.8e-198
 Identities = 345/503 (68%), Positives = 416/503 (82%)

Query:     9 TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIES 68
             TY++KML NYVP+YVML LGVITNDNVLE+++ L+ QLK+LK + VDG+MVDVWWGI+ES
Sbjct:    68 TYEDKMLTNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVES 127

Query:    69 KGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDI 128
             KGP+QY WSAYR+LF ++Q + LKLQAIMSFH+CGGN+GD V IPIPKWVLEIG++NPDI
Sbjct:   128 KGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDI 187

Query:   129 FYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGL 188
             FYTN+SGNRNKE L++ VD+  LF GRTA+E+Y DYMKSFR+NM DF+ +GVIIDIEVGL
Sbjct:   188 FYTNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGL 247

Query:   189 GPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDK 248
             GPAGELRYPSY E+QGWVFPGIGEFQCYDKYL+++++E     GHPEW+LP+NAG YN  
Sbjct:   248 GPAGELRYPSYSETQGWVFPGIGEFQCYDKYLRSDYEEEVRRIGHPEWKLPENAGEYNSV 307

Query:   249 PESTEFFK-TNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIH 307
             P  TEFF+ +NGTYL E+GNFFL+WYS KL+ HGD+ILDEANK FLGCK+K+AAKVSGIH
Sbjct:   308 PGETEFFEYSNGTYLKEEGNFFLSWYSKKLLLHGDQILDEANKVFLGCKLKIAAKVSGIH 367

Query:   308 WWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQ 367
             WWY  ++HAAELTAGYYNL +RDGYR IA+I+ RH+ ILNFTCLEM+N+EQ A AK GPQ
Sbjct:   368 WWYKTESHAAELTAGYYNLKNRDGYRAIAKIMRRHHAILNFTCLEMKNTEQPAKAKSGPQ 427

Query:   368 ELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLR 427
             ELVQQVLS GWRE IEVAGENAL R+D   YNQI+LNARPNGVN++G P  RM+G TYLR
Sbjct:   428 ELVQQVLSSGWREGIEVAGENALPRFDRNGYNQIILNARPNGVNQDGKP--RMFGFTYLR 485

Query:   428 LSDDLLAENNXXXXXXXXXXMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKL 487
             LSD LL E N          MHA+Q+YC +P++YNHE+ PLERS+   S E  ME T+  
Sbjct:   486 LSDKLLNEPNFSTFKMFLKRMHANQEYCSEPERYNHELLPLERSRNDESLEMFMEETEPF 545

Query:   488 LPFPWDEETDMNVGGTRGILAAL 510
              PFPW +ETDM++     +L+ L
Sbjct:   546 DPFPWLDETDMSIRPFESVLSLL 568
GO:0000272 "polysaccharide catabolic process" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016161 "beta-amylase activity" evidence=IEA;ISS
GO:0043169 "cation binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2129810 BAM5 "beta-amylase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127033 BAM2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130504 CT-BMY "chloroplast beta-amylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076086 BAM1 "beta-amylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162152 BAM4 "beta-amylase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180029 BMY3 "beta-amylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8L762BAM6_ARATH3, ., 2, ., 1, ., 20.69580.96330.8665yesno
P55005AMYB_MAIZE3, ., 2, ., 1, ., 20.66870.92480.9836N/Ano
O64407AMYB_VIGUN3, ., 2, ., 1, ., 20.78540.95180.9959N/Ano
P10537AMYB_IPOBA3, ., 2, ., 1, ., 20.68230.93060.9679N/Ano
P10538AMYB_SOYBN3, ., 2, ., 1, ., 20.77930.95180.9959yesno
O65015AMYB_TRIRP3, ., 2, ., 1, ., 20.78940.95180.9959N/Ano
P16098AMYB_HORVU3, ., 2, ., 1, ., 20.62540.95760.9289N/Ano
O22585AMYB_MEDSA3, ., 2, ., 1, ., 20.77930.95180.9959N/Ano
P93594AMYB_WHEAT3, ., 2, ., 1, ., 20.66320.92670.9562N/Ano
P82993AMYB_HORVS3, ., 2, ., 1, ., 20.62740.95760.9289N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.983
3rd Layer3.2.1.20.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00026081001
RecName- Full=Beta-amylase; EC=3.2.1.2; (520 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
PLN02801517 PLN02801, PLN02801, beta-amylase 0.0
PLN02803548 PLN02803, PLN02803, beta-amylase 0.0
PLN02905702 PLN02905, PLN02905, beta-amylase 1e-166
PLN00197573 PLN00197, PLN00197, beta-amylase; Provisional 1e-165
PLN02705681 PLN02705, PLN02705, beta-amylase 1e-139
PLN02161531 PLN02161, PLN02161, beta-amylase 1e-122
pfam01373399 pfam01373, Glyco_hydro_14, Glycosyl hydrolase fami 1e-116
>gnl|CDD|215431 PLN02801, PLN02801, beta-amylase Back     alignment and domain information 
 Score = 1006 bits (2602), Expect = 0.0
 Identities = 401/516 (77%), Positives = 453/516 (87%), Gaps = 1/516 (0%)

Query: 5   PAALTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWG 64
               TY+EKML NYVP+YVMLPLGV+T DNVLED++ LE QLK LK AGVDG+MVDVWWG
Sbjct: 2   QNTTTYEEKMLANYVPVYVMLPLGVVTADNVLEDEEGLEKQLKRLKEAGVDGVMVDVWWG 61

Query: 65  IIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGET 124
           I+ESKGP+QYDWSAYRSLFEL+Q + LK+QAIMSFHQCGGNVGD V IPIP+WV ++G++
Sbjct: 62  IVESKGPKQYDWSAYRSLFELVQSFGLKIQAIMSFHQCGGNVGDAVNIPIPQWVRDVGDS 121

Query: 125 NPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDI 184
           +PDIFYTNRSGNRNKEYL+IGVD+ PLF GRTA+E+YSDYMKSFR+NM DFLEAGVIIDI
Sbjct: 122 DPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEAGVIIDI 181

Query: 185 EVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGT 244
           EVGLGPAGELRYPSYPE+QGWVFPGIGEFQCYDKYLKA+FKEAAT +GHPEWELPD+AG 
Sbjct: 182 EVGLGPAGELRYPSYPETQGWVFPGIGEFQCYDKYLKADFKEAATEAGHPEWELPDDAGE 241

Query: 245 YNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVS 304
           YND PE T FFK+NGTYL+E+G FFLTWYSNKL+ HGD+ILDEANKAFLGCKVKLAAKVS
Sbjct: 242 YNDTPEDTGFFKSNGTYLTEEGKFFLTWYSNKLLLHGDQILDEANKAFLGCKVKLAAKVS 301

Query: 305 GIHWWYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKC 364
           GIHWWY   +HAAELTAGYYNL  RDGYRPIAR+LSRHYGILNFTCLEMR++EQ A A  
Sbjct: 302 GIHWWYKHHSHAAELTAGYYNLKGRDGYRPIARMLSRHYGILNFTCLEMRDTEQPAEALS 361

Query: 365 GPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVT 424
            PQELVQQVLSG WRE IEVAGENALSRYD   YNQILLNARPNGVNK+G PKLRM+GVT
Sbjct: 362 APQELVQQVLSGAWREGIEVAGENALSRYDRRGYNQILLNARPNGVNKDGKPKLRMFGVT 421

Query: 425 YLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEAT 484
           YLRLSD+LL E NF +FK FV+KMHADQDYCPDP KY HEI PLERS P+ S E+++EAT
Sbjct: 422 YLRLSDELLEETNFSLFKTFVRKMHADQDYCPDPAKYGHEIVPLERSNPEISIEDILEAT 481

Query: 485 KKLLPFPWDEETDMNVGG-TRGILAALFGKIFSMFK 519
           + + PFPWD+ETDM+V G    +L ++  KI S+F 
Sbjct: 482 EPVPPFPWDKETDMSVDGGLAELLDSVLDKIESIFL 517

Length = 517
>gnl|CDD|178400 PLN02803, PLN02803, beta-amylase Back     alignment and domain information
>gnl|CDD|178493 PLN02905, PLN02905, beta-amylase Back     alignment and domain information
>gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional Back     alignment and domain information
>gnl|CDD|178307 PLN02705, PLN02705, beta-amylase Back     alignment and domain information
>gnl|CDD|177820 PLN02161, PLN02161, beta-amylase Back     alignment and domain information
>gnl|CDD|216462 pfam01373, Glyco_hydro_14, Glycosyl hydrolase family 14 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 519
PLN02801517 beta-amylase 100.0
PLN02803548 beta-amylase 100.0
PLN00197573 beta-amylase; Provisional 100.0
PLN02905702 beta-amylase 100.0
PLN02705681 beta-amylase 100.0
PLN02161531 beta-amylase 100.0
PF01373402 Glyco_hydro_14: Glycosyl hydrolase family 14; Inte 100.0
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.85
COG1874 673 LacA Beta-galactosidase [Carbohydrate transport an 99.5
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 98.73
PLN03059 840 beta-galactosidase; Provisional 98.37
TIGR03356427 BGL beta-galactosidase. 97.59
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.41
KOG0496 649 consensus Beta-galactosidase [Carbohydrate transpo 97.27
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 97.08
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 96.94
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 96.75
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 96.65
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 96.37
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 96.2
PLN02814504 beta-glucosidase 96.0
PRK13511469 6-phospho-beta-galactosidase; Provisional 95.92
PLN02998497 beta-glucosidase 95.71
PLN02849503 beta-glucosidase 95.61
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 95.58
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 95.41
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 95.36
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 95.34
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 94.33
COG3693345 XynA Beta-1,4-xylanase [Carbohydrate transport and 93.05
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 91.85
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 91.4
cd03465330 URO-D_like The URO-D _like protein superfamily inc 91.31
PF14488166 DUF4434: Domain of unknown function (DUF4434) 89.89
cd00465306 URO-D_CIMS_like The URO-D_CIMS_like protein superf 88.11
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 87.51
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 86.46
PRK01060281 endonuclease IV; Provisional 85.53
PF03659386 Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int 84.55
PRK11572248 copper homeostasis protein CutC; Provisional 84.01
TIGR01463340 mtaA_cmuA methyltransferase, MtaA/CmuA family. Thi 83.46
PF03932201 CutC: CutC family; InterPro: IPR005627 Copper tran 82.93
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 82.47
cd03308378 CmuA_CmuC_like CmuA_CmuC_like: uncharacterized pro 80.24
>PLN02801 beta-amylase Back     alignment and domain information 
Probab=100.00  E-value=5.5e-212  Score=1650.03  Aligned_cols=512  Identities=78%  Similarity=1.351  Sum_probs=503.6

Q ss_pred             cccccccCCCCccEEEeeccceeeCCCcccCHHHHHHHHHHHHHcCcceEEEeeeeeeeccCCCccccchhHHHHHHHHH
Q 010067            8 LTYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQ   87 (519)
Q Consensus         8 ~~~~~~~~~~~vpv~VMlPLd~v~~~~~~~~~~~~~~~L~~LK~~GVdgV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~   87 (519)
                      .....++..++||||||||||+|+++|+|+++++++++|++||++||||||||||||+||+++|++|||++|++||+|||
T Consensus         5 ~~~~~~~~~~~vpvyVMlPLd~V~~~~~l~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mvr   84 (517)
T PLN02801          5 TTYEEKMLANYVPVYVMLPLGVVTADNVLEDEEGLEKQLKRLKEAGVDGVMVDVWWGIVESKGPKQYDWSAYRSLFELVQ   84 (517)
T ss_pred             ccccccccCCceeEEEeeecceecCCCccCCHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCccCcHHHHHHHHHHH
Confidence            34577899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCcEEEEEeeeccCCCCCCcccccCChhhhhhhccCCCeeeecCCCCccccccccccCCccCCCCCChHHHHHHHHHH
Q 010067           88 QYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKS  167 (519)
Q Consensus        88 ~~GLKv~~imsfHqCGGNVGD~~~IpLP~WV~~~g~~~PDi~ytD~~G~rn~E~lSlg~D~~pvl~GRTpi~~Y~dfm~s  167 (519)
                      ++|||||||||||||||||||+|+||||+||++++++|||||||||+|+||+||||||||++|||+||||||+|+|||+|
T Consensus        85 ~~GLKlq~vmSFHqCGGNVGD~~~IpLP~WV~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~S  164 (517)
T PLN02801         85 SFGLKIQAIMSFHQCGGNVGDAVNIPIPQWVRDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKS  164 (517)
T ss_pred             HcCCeEEEEEEecccCCCCCCcccccCCHHHHHhhccCCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccceEEEEeeccCCCCCCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 010067          168 FRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYND  247 (519)
Q Consensus       168 F~~~f~~~l~~~~I~eI~VGlGP~GELRYPSyp~~~gW~~pGiGEFQCYDky~~~~f~~~a~~~gn~~WG~p~~ag~yn~  247 (519)
                      ||++|++||++++|+||+|||||||||||||||++.||+||||||||||||||+++||++|+++||++||+|+|+|+||+
T Consensus       165 Fr~~F~~~l~~~~I~eI~VGlGP~GELRYPSYp~~~gW~fpGiGEFQCYDky~~~~l~~aA~~~G~p~Wg~P~dag~Yn~  244 (517)
T PLN02801        165 FRENMADFLEAGVIIDIEVGLGPAGELRYPSYPETQGWVFPGIGEFQCYDKYLKADFKEAATEAGHPEWELPDDAGEYND  244 (517)
T ss_pred             HHHHHHHhccCCeeEEEEEcccccccccCCCCcCCCCCCCCCcceeeeccHHHHHHHHHHHHhcCCcccCCCCCCCcccC
Confidence            99999999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEecceeecccCCCchhhhhhcccCCC
Q 010067          248 KPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLN  327 (519)
Q Consensus       248 ~P~~t~FF~~~g~~~s~YGrFFL~WYs~~L~~Hgdril~~A~~~F~g~~v~l~aKv~GIHWwy~t~SHaAElTAGyYN~~  327 (519)
                      +|++|+||+++|+|+|+||||||+|||++|++||||||++|+++|++++|+|+||||||||||+|+||||||||||||++
T Consensus       245 ~P~~t~FF~~~G~~~s~YG~FFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKvaGIHWwY~t~SHaAElTAGyYN~~  324 (517)
T PLN02801        245 TPEDTGFFKSNGTYLTEEGKFFLTWYSNKLLLHGDQILDEANKAFLGCKVKLAAKVSGIHWWYKHHSHAAELTAGYYNLK  324 (517)
T ss_pred             CCCCCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeceeeeecCCCCchHhhccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHhhcCcEEEEeeccccCCCCCCcCCCChHHHHHHHHHHhhhcCCeeeeccccccCChhHHHHHHHHhCC
Q 010067          328 DRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARP  407 (519)
Q Consensus       328 ~rdGY~~Ia~m~~rh~~~l~fTclEM~d~e~~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~  407 (519)
                      +||||+|||+|||||+|+|+||||||+|++||++++|+||+||+||+++||++||+|+|||||+|||+++|+||++|+++
T Consensus       325 ~rDGY~pIa~m~~rh~~~l~FTClEM~D~eq~~~~~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~D~~~y~qi~~~a~~  404 (517)
T PLN02801        325 GRDGYRPIARMLSRHYGILNFTCLEMRDTEQPAEALSAPQELVQQVLSGAWREGIEVAGENALSRYDRRGYNQILLNARP  404 (517)
T ss_pred             CccchHHHHHHHHHcCCeEEEeecccccCCCCcccCCCHHHHHHHHHHHHHHcCCcEeeeccccccCHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcceeEEecccccccCccchhHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCCCCChHHHHHHccCC
Q 010067          408 NGVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKL  487 (519)
Q Consensus       408 ~g~~~~g~~~~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  487 (519)
                      ++++.+|++..+|++||||||++.||+++||++|++|||+||+++++|++|++|.|++.||+||+|+++||+|+|||+|+
T Consensus       405 ~~~~~~g~~~~~~~~FTyLRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  484 (517)
T PLN02801        405 NGVNKDGKPKLRMFGVTYLRLSDELLEETNFSLFKTFVRKMHADQDYCPDPAKYGHEIVPLERSNPEISIEDILEATEPV  484 (517)
T ss_pred             ccCCcccccccceeeEEEecCchHhcCcchHHHHHHHHHHhccccccCCChhhcCCCCCccccCCCcccHHHHHHhcCCC
Confidence            99888899888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCCc-cchhhHhhhhhcccCC
Q 010067          488 LPFPWDEETDMNVGGT-RGILAALFGKIFSMFK  519 (519)
Q Consensus       488 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  519 (519)
                      +||||++||||+|+|+ .+++..++.+|.++|.
T Consensus       485 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  517 (517)
T PLN02801        485 PPFPWDKETDMSVDGGLAELLDSVLDKIESIFL  517 (517)
T ss_pred             CCCCCCCccccccCcccchhHHHHHHhhHHhhC
Confidence            9999999999999997 7888999999999874

>PLN02803 beta-amylase Back     alignment and domain information
>PLN00197 beta-amylase; Provisional Back     alignment and domain information
>PLN02905 beta-amylase Back     alignment and domain information
>PLN02705 beta-amylase Back     alignment and domain information
>PLN02161 beta-amylase Back     alignment and domain information
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01060 endonuclease IV; Provisional Back     alignment and domain information
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK11572 copper homeostasis protein CutC; Provisional Back     alignment and domain information
>TIGR01463 mtaA_cmuA methyltransferase, MtaA/CmuA family Back     alignment and domain information
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd03308 CmuA_CmuC_like CmuA_CmuC_like: uncharacterized protein family similar to uroporphyrinogen decarboxylase (URO-D) and the methyltransferases CmuA and CmuC Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1q6c_A495 Crystal Structure Of Soybean Beta-Amylase Complexed 0.0
1v3h_A495 The Roles Of Glu186 And Glu380 In The Catalytic Rea 0.0
1v3i_A495 The Roles Of Glu186 And Glu380 In The Catalytic Rea 0.0
1wds_A495 The Role Of An Inner Loop In The Catalytic Mechanis 0.0
1wdq_A495 The Role Of An Inner Loop In The Catalytic Mechanis 0.0
1q6g_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (N 0.0
1bya_A495 Crystal Structures Of Soybean Beta-Amylase Reacted 0.0
1q6d_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (M 0.0
2dqx_A495 Mutant Beta-Amylase (W55r) From Soy Bean Length = 4 0.0
1q6e_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (E 0.0
1uko_A495 Crystal Structure Of Soybean Beta-Amylase Mutant Su 0.0
1ukp_A495 Crystal Structure Of Soybean Beta-Amylase Mutant Su 0.0
1wdr_A495 The Role Of An Inner Loop In The Catalytic Mechanis 0.0
1btc_A491 Three-Dimensional Structure Of Soybean Beta-Amylase 0.0
1fa2_A498 Crystal Structure Of Beta-Amylase From Sweet Potato 0.0
2xff_A535 Crystal Structure Of Barley Beta-Amylase Complexed 0.0
1b1y_A500 Sevenfold Mutant Of Barley Beta-Amylase Length = 50 0.0
3voc_A419 Crystal Structure Of The Catalytic Domain Of Beta-a 8e-46
1vep_A516 Crystal Structure Analysis Of Triple (T47mY164ET328 8e-41
1ven_A516 Crystal Structure Analysis Of Y164eMALTOSE OF BACIL 2e-39
1b90_A516 Bacillus Cereus Beta-Amylase Apo Form Length = 516 1e-38
1veo_A516 Crystal Structure Analysis Of Y164fMALTOSE OF BACIL 1e-38
1itc_A516 Beta-amylase From Bacillus Cereus Var. Mycoides Com 5e-38
>pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose Length = 495 Back     alignment and structure 
Iteration: 1

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/494 (76%), Positives = 423/494 (85%)
Query: 9   TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIES 68
           T D  ML NYVP+YVMLPLGV+  DNV ED D L+ QL +L+AAGVDG+MVDVWWGIIE 
Sbjct: 2   TSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIEL 61
Query: 69  KGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDI 128
           KGP+QYDW AYRSL +L+Q+  L LQAIMSFHQCGGNVGD+V IPIP+WVL+IGE+N DI
Sbjct: 62  KGPKQYDWRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDI 121
Query: 129 FYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGL 188
           FYTNRSG RNKEYLT+GVD++P+F GRTAIEIYSDYMKSFR+NM DFLE+G+IIDIEVGL
Sbjct: 122 FYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGL 181
Query: 189 GPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDK 248
           GPAGELRYPSYP+SQGW FPGIGEFQCYDKYLKA+FK A   +GHPEWELPD+AG YND 
Sbjct: 182 GPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDV 241
Query: 249 PESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHW 308
           PEST FFK+NGTY++E+G FFLTWYSNKL+ HGD+ILDEANKAFLGCKVKLA KVSGIHW
Sbjct: 242 PESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHW 301
Query: 309 WYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQE 368
           WY  +NHAAELTAGYYNLNDRDGYRPIAR+LSRH+ ILNFTCLEMR+SEQ + AK GPQE
Sbjct: 302 WYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQE 361
Query: 369 LVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRL 428
           LVQQVLSGGWRE+I VAGENAL RYDATAYNQI+LNARP GVN  GPPKL M+GVTYLRL
Sbjct: 362 LVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVNNNGPPKLSMFGVTYLRL 421
Query: 429 SDDLLAENNXXXXXXXXXXMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLL 488
           SDDLL ++N          MHADQDYC +PQKYNH I PL+ S PK   E L+EATK  L
Sbjct: 422 SDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTL 481
Query: 489 PFPWDEETDMNVGG 502
           PFPW  ETDM V G
Sbjct: 482 PFPWLPETDMKVDG 495
>pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase Length = 495 Back     alignment and structure
>pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum Length = 495 Back     alignment and structure
>pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis Length = 495 Back     alignment and structure
>pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum Length = 495 Back     alignment and structure
>pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean Length = 495 Back     alignment and structure
>pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 Length = 495 Back     alignment and structure
>pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 Back     alignment and structure
>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 Back     alignment and structure
>pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodextrin Length = 491 Back     alignment and structure
>pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato Length = 498 Back     alignment and structure
>pdb|2XFF|A Chain A, Crystal Structure Of Barley Beta-Amylase Complexed With Acarbose Length = 535 Back     alignment and structure
>pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase Length = 500 Back     alignment and structure
>pdb|3VOC|A Chain A, Crystal Structure Of The Catalytic Domain Of Beta-amylase From Paenibacillus Polymyxa Length = 419 Back     alignment and structure
>pdb|1VEP|A Chain A, Crystal Structure Analysis Of Triple (T47mY164ET328N) MALTOSE OF BACILLUS CEREUS BETA-Amylase At Ph 6.5 Length = 516 Back     alignment and structure
>pdb|1VEN|A Chain A, Crystal Structure Analysis Of Y164eMALTOSE OF BACILUS Cereus Beta-Amylase At Ph 4.6 Length = 516 Back     alignment and structure
>pdb|1B90|A Chain A, Bacillus Cereus Beta-Amylase Apo Form Length = 516 Back     alignment and structure
>pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS Cereus Beta-Amylase At Ph 4.6 Length = 516 Back     alignment and structure
>pdb|1ITC|A Chain A, Beta-amylase From Bacillus Cereus Var. Mycoides Complexed With Maltopentaose Length = 516 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1wdp_A495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 0.0
2xfr_A535 Beta-amylase; hydrolase, carbohydrate metabolism, 0.0
1fa2_A498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 0.0
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 1e-167
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Length = 495 Back     alignment and structure
 Score =  724 bits (1870), Expect = 0.0
 Identities = 386/494 (78%), Positives = 430/494 (87%)

Query: 9   TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIES 68
           T D  ML NYVP+YVMLPLGV+  DNV ED D L+ QL +L+AAGVDG+MVDVWWGIIE 
Sbjct: 2   TSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIEL 61

Query: 69  KGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDI 128
           KGP+QYDW AYRSL +L+Q+  L LQAIMSFHQCGGNVGD+V IPIP+WVL+IGE+N DI
Sbjct: 62  KGPKQYDWRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDI 121

Query: 129 FYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGL 188
           FYTNRSG RNKEYLT+GVD++P+F GRTAIEIYSDYMKSFR+NM DFLE+G+IIDIEVGL
Sbjct: 122 FYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGL 181

Query: 189 GPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDK 248
           GPAGELRYPSYP+SQGW FPGIGEFQCYDKYLKA+FK A   +GHPEWELPD+AG YND 
Sbjct: 182 GPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDV 241

Query: 249 PESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHW 308
           PEST FFK+NGTY++E+G FFLTWYSNKL+ HGD+ILDEANKAFLGCKVKLA KVSGIHW
Sbjct: 242 PESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHW 301

Query: 309 WYLADNHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQE 368
           WY  +NHAAELTAGYYNLNDRDGYRPIAR+LSRH+ ILNFTCLEMR+SEQ + AK GPQE
Sbjct: 302 WYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQE 361

Query: 369 LVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRL 428
           LVQQVLSGGWRE+I VAGENAL RYDATAYNQI+LNARP GVN  GPPKL M+GVTYLRL
Sbjct: 362 LVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVNNNGPPKLSMFGVTYLRL 421

Query: 429 SDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLL 488
           SDDLL ++NF IFK FV KMHADQDYC +PQKYNH I PL+ S PK   E L+EATK  L
Sbjct: 422 SDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTL 481

Query: 489 PFPWDEETDMNVGG 502
           PFPW  ETDM V G
Sbjct: 482 PFPWLPETDMKVDG 495
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Length = 535 Back     alignment and structure
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Length = 498 Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Length = 516 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
1wdp_A495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 100.0
2xfr_A535 Beta-amylase; hydrolase, carbohydrate metabolism, 100.0
1fa2_A498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 100.0
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 100.0
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 99.78
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 99.7
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 99.49
3d3a_A 612 Beta-galactosidase; protein structure initiative I 99.22
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 99.01
4e8d_A 595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 98.87
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 98.84
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 98.8
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 98.57
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.32
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.24
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 98.22
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 98.15
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 98.14
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 98.11
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 98.11
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 98.07
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 98.06
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 98.06
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 98.05
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 98.04
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 98.03
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 98.03
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 98.03
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 98.02
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.02
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 98.0
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 97.99
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 97.98
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 97.98
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 97.96
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 97.96
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 97.96
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 97.95
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 97.92
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 97.9
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 97.9
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 97.86
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 97.81
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 97.79
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 97.75
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 97.74
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.74
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.72
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 97.71
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.66
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 97.65
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 97.64
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 97.63
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.62
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 97.55
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 97.54
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 97.5
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 97.49
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 97.44
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.39
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 97.39
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 97.35
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.31
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 97.31
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 97.29
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 97.23
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 97.19
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.14
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.14
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 97.12
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.11
4atd_A513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 97.05
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 97.04
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 97.04
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 97.04
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.02
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.01
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 97.0
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 96.91
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 96.71
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 96.69
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 96.66
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 96.65
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 96.57
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 96.56
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 96.45
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 96.43
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 96.42
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 96.41
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.38
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 96.28
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 96.21
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 95.94
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 95.69
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 95.61
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 95.54
4a3y_A540 Raucaffricine-O-beta-D-glucosidase; hydrolase, alk 95.27
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 95.24
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 95.14
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 95.12
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 95.06
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 94.81
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 94.4
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 94.05
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 93.99
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 93.81
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 93.49
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 93.03
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 92.44
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 92.42
1uwi_A489 Beta-galactosidase; hydrolase, beta-glycosidase, g 92.08
2bdq_A224 Copper homeostasis protein CUTC; alpha beta protei 91.9
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 90.47
4acy_A382 Endo-alpha-mannosidase; hydrolase, endomannosidase 90.45
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 89.1
1twd_A256 Copper homeostasis protein CUTC; TIM-like protein, 88.38
4ad1_A380 Glycosyl hydrolase family 71; glycoside hydrolase 87.73
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 87.65
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 86.92
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 86.8
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 86.27
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 86.14
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 84.36
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 84.11
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 84.01
3tva_A290 Xylose isomerase domain protein TIM barrel; struct 83.73
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 83.62
1j93_A353 UROD, uroporphyrinogen decarboxylase; beta barrel, 83.49
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 82.62
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 81.58
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Back     alignment and structure
Probab=100.00  E-value=3.3e-207  Score=1611.98  Aligned_cols=494  Identities=78%  Similarity=1.332  Sum_probs=486.8

Q ss_pred             ccccccCCCCccEEEeeccceeeCCCcccCHHHHHHHHHHHHHcCcceEEEeeeeeeeccCCCccccchhHHHHHHHHHH
Q 010067            9 TYDEKMLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQ   88 (519)
Q Consensus         9 ~~~~~~~~~~vpv~VMlPLd~v~~~~~~~~~~~~~~~L~~LK~~GVdgV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~   88 (519)
                      ++++.+..++||||||||||+|+++|+|+++++++++|++||++||||||||||||+||+++|++|||++|++|++|||+
T Consensus         2 ~~~~~~~~~~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~   81 (495)
T 1wdp_A            2 TSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQE   81 (495)
T ss_dssp             -CHHHHHTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHH
T ss_pred             CccccccCCCccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHH
Confidence            35567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEEEeeeccCCCCCCcccccCChhhhhhhccCCCeeeecCCCCccccccccccCCccCCCCCChHHHHHHHHHHH
Q 010067           89 YELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSF  168 (519)
Q Consensus        89 ~GLKv~~imsfHqCGGNVGD~~~IpLP~WV~~~g~~~PDi~ytD~~G~rn~E~lSlg~D~~pvl~GRTpi~~Y~dfm~sF  168 (519)
                      +|||||||||||||||||||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||||+|+|||+||
T Consensus        82 ~GLKlq~vmSFHqCGgNVGD~~~IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SF  161 (495)
T 1wdp_A           82 CGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSF  161 (495)
T ss_dssp             TTCEEEEEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHH
T ss_pred             cCCeEEEEEEeeecCCCCCCcccccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccceEEEEeeccCCCCCCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 010067          169 RKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDK  248 (519)
Q Consensus       169 ~~~f~~~l~~~~I~eI~VGlGP~GELRYPSyp~~~gW~~pGiGEFQCYDky~~~~f~~~a~~~gn~~WG~p~~ag~yn~~  248 (519)
                      |++|++|+++++|+||+|||||||||||||||+.+||+||||||||||||||+++||++|+++||++||+|+|+|+||++
T Consensus       162 r~~F~~~~~~~~I~eI~VGlGP~GELRYPSYp~~~gW~fPGiGEFQCYDky~~~~Lk~aA~~~G~~~WG~P~dag~yn~~  241 (495)
T 1wdp_A          162 RENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDV  241 (495)
T ss_dssp             HHHTHHHHHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCCSCSSSCCTTCC
T ss_pred             HHHHHHhccCCeeEEEEeCccccccccCCCCccccCCCCCCcceeeechHHHHHHHHHHHHHhCchhhCCCCCCCccCCC
Confidence            99999999668999999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEecceeecccCCCchhhhhhcccCCCC
Q 010067          249 PESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLND  328 (519)
Q Consensus       249 P~~t~FF~~~g~~~s~YGrFFL~WYs~~L~~Hgdril~~A~~~F~g~~v~l~aKv~GIHWwy~t~SHaAElTAGyYN~~~  328 (519)
                      |++|+||+++|+|+|+||||||+|||++|++||||||++|+++|++++|+|++|||||||||+|+|||||||||||||++
T Consensus       242 P~~t~FF~~~G~w~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~~~~v~l~~KV~GIHWwY~t~SHaAELTAGyYNt~~  321 (495)
T 1wdp_A          242 PESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLND  321 (495)
T ss_dssp             GGGSTTTSTTSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTT
T ss_pred             CCCCCCcCCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeceeeeccCCCCChHHhhcccccCCC
Confidence            99999999989999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHhhcCcEEEEeeccccCCCCCCcCCCChHHHHHHHHHHhhhcCCeeeeccccccCChhHHHHHHHHhCCC
Q 010067          329 RDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPN  408 (519)
Q Consensus       329 rdGY~~Ia~m~~rh~~~l~fTclEM~d~e~~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~  408 (519)
                      ||||+|||+|||||+|+|+||||||+|+|||++++|+||+||+||+++|+++||+|+|||||+|||.++|+||++|++++
T Consensus       322 rdGY~~Ia~m~~rh~~~l~fTC~EM~d~eq~~~~~s~Pe~Lv~QV~~aa~~~Gv~~aGENAL~~~d~~a~~qI~~~~~~~  401 (495)
T 1wdp_A          322 RDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQ  401 (495)
T ss_dssp             BCSSHHHHHHHHTTTCEEEECCTTCCGGGSCGGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTT
T ss_pred             CCchHHHHHHHHHcCCeEEEEecCCCcCCCCcccCCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcceeEEecccccccCccchhHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCCCCChHHHHHHccCCC
Q 010067          409 GVNKEGPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLL  488 (519)
Q Consensus       409 g~~~~g~~~~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  488 (519)
                      +++.+|+++.++++||||||++.||+++||++|++|||+||+++++|+++.+|.|+++||+||+++|+||+|+|||+|..
T Consensus       402 ~~~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  481 (495)
T 1wdp_A          402 GVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTL  481 (495)
T ss_dssp             CCCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTCCCCCCCCCCCCCCHHHHHHTTSCCC
T ss_pred             cccccCCccCceeeEEEecCChhhCCchhHHHHHHHHHHHhcCCCcCcCchhhcccccchhhccccccHHHHHHhcCCCC
Confidence            99889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccCC
Q 010067          489 PFPWDEETDMNVGG  502 (519)
Q Consensus       489 ~~~~~~~~~~~~~~  502 (519)
                      ||||++||||||+|
T Consensus       482 ~~~~~~~~~~~~~~  495 (495)
T 1wdp_A          482 PFPWLPETDMKVDG  495 (495)
T ss_dssp             CCCCCSSCSSCSCC
T ss_pred             CCCCCCcCCCCCCC
Confidence            99999999999987
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Back     alignment and structure
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A Back     alignment and structure
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A Back     alignment and structure
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus} Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 519
d1wdpa1490 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine m 0.0
d1b1ya_500 c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare 0.0
d1fa2a_498 c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea b 0.0
d1vema2417 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus 0.0
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Length = 490 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: beta-Amylase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  805 bits (2082), Expect = 0.0
 Identities = 384/489 (78%), Positives = 428/489 (87%)

Query: 14  MLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQ 73
           ML NYVP+YVMLPLGV+  DNV ED D L+ QL +L+AAGVDG+MVDVWWGIIE KGP+Q
Sbjct: 2   MLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQ 61

Query: 74  YDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNR 133
           YDW AYRSL +L+Q+  L LQAIMSFHQCGGNVGD+V IPIP+WVL+IGE+N DIFYTNR
Sbjct: 62  YDWRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNR 121

Query: 134 SGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGE 193
           SG RNKEYLT+GVD++P+F GRTAIEIYSDYMKSFR+NM DFLE+G+IIDIEVGLGPAGE
Sbjct: 122 SGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGE 181

Query: 194 LRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTE 253
           LRYPSYP+SQGW FPGIGEFQCYDKYLKA+FK A   +GHPEWELPD+AG YND PEST 
Sbjct: 182 LRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDVPESTG 241

Query: 254 FFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLAD 313
           FFK+NGTY++E+G FFLTWYSNKL+ HGD+ILDEANKAFLGCKVKLA KVSGIHWWY  +
Sbjct: 242 FFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVE 301

Query: 314 NHAAELTAGYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQV 373
           NHAAELTAGYYNLNDRDGYRPIAR+LSRH+ ILNFTCLEMR+SEQ + AK GPQELVQQV
Sbjct: 302 NHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQV 361

Query: 374 LSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMYGVTYLRLSDDLL 433
           LSGGWRE+I VAGENAL RYDATAYNQI+LNARP GVN  GPPKL M+GVTYLRLSDDLL
Sbjct: 362 LSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVNNNGPPKLSMFGVTYLRLSDDLL 421

Query: 434 AENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWD 493
            ++NF IFK FV KMHADQDYC +PQKYNH I PL+ S PK   E L+EATK  LPFPW 
Sbjct: 422 QKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTLPFPWL 481

Query: 494 EETDMNVGG 502
            ETDM V G
Sbjct: 482 PETDMKVDG 490
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 500 Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 498 Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
d1wdpa1490 beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} 100.0
d1b1ya_500 beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 100.0
d1fa2a_498 beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI 100.0
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 100.0
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.57
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 98.89
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 97.97
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.84
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 97.81
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 97.71
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 97.65
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 97.54
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.51
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 97.4
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 97.37
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 97.34
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 97.33
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 97.3
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.27
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 97.27
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 97.26
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 97.15
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 97.14
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 97.13
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 97.12
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 96.99
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 96.95
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 96.93
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 96.84
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 96.82
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 96.82
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.71
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 96.68
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 96.67
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 96.64
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.5
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 96.45
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 96.24
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 96.16
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 96.02
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 95.88
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 95.86
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 95.13
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 94.68
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 94.58
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 94.42
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 94.34
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 94.27
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 93.23
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 89.86
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 89.64
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 88.96
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 88.87
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 88.26
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 88.26
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 85.79
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 84.86
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 84.8
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 83.61
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 83.32
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 82.47
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 81.86
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 81.5
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 80.51
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 80.15
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 80.11
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: beta-Amylase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.2e-213  Score=1648.02  Aligned_cols=489  Identities=79%  Similarity=1.341  Sum_probs=485.1

Q ss_pred             cCCCCccEEEeeccceeeCCCcccCHHHHHHHHHHHHHcCcceEEEeeeeeeeccCCCccccchhHHHHHHHHHHcCCcE
Q 010067           14 MLPNYVPIYVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKL   93 (519)
Q Consensus        14 ~~~~~vpv~VMlPLd~v~~~~~~~~~~~~~~~L~~LK~~GVdgV~vdVWWGiVE~~~p~~YdWs~Y~~l~~mv~~~GLKv   93 (519)
                      |.++|||||||||||+|+++|+++++++++++|++||++||||||||||||+||+++|++|||++|++||+|||++||||
T Consensus         2 ~~~~yVpVyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsgY~~l~~mvr~~GLKl   81 (490)
T d1wdpa1           2 MLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTL   81 (490)
T ss_dssp             HHTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred             CccccccEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHHHHHHHHHHHHcCCeE
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeeccCCCCCCcccccCChhhhhhhccCCCeeeecCCCCccccccccccCCccCCCCCChHHHHHHHHHHHHHHHH
Q 010067           94 QAIMSFHQCGGNVGDVVTIPIPKWVLEIGETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMF  173 (519)
Q Consensus        94 ~~imsfHqCGGNVGD~~~IpLP~WV~~~g~~~PDi~ytD~~G~rn~E~lSlg~D~~pvl~GRTpi~~Y~dfm~sF~~~f~  173 (519)
                      |||||||||||||||+|+||||+||++++++|||||||||+|+||+||||||||++|||+||||||+|+|||+|||++|+
T Consensus        82 q~vmSFHqCGGNvGD~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~  161 (490)
T d1wdpa1          82 QAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMS  161 (490)
T ss_dssp             EEEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTH
T ss_pred             EEEEeecccCCCCCcccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcccceEEEEeeccCCCCCCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCc
Q 010067          174 DFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLKAEFKEAATASGHPEWELPDNAGTYNDKPESTE  253 (519)
Q Consensus       174 ~~l~~~~I~eI~VGlGP~GELRYPSyp~~~gW~~pGiGEFQCYDky~~~~f~~~a~~~gn~~WG~p~~ag~yn~~P~~t~  253 (519)
                      +||++|+|+||+|||||||||||||||+++||+||||||||||||||+++||++|+++||++||.|+|+|+||++|++|+
T Consensus       162 ~~~~~g~I~eI~VGlGP~GELRYPSYp~~~Gw~yPGiGEFQCYDky~~~~l~~aA~~~G~~~Wg~P~dag~yn~~P~~t~  241 (490)
T d1wdpa1         162 DFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDVPESTG  241 (490)
T ss_dssp             HHHHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCCSCSSSCCTTCCGGGST
T ss_pred             HhccCCeEEEEEeccccCccccCCCCccccCCcCCCcceeeeCCHHHHHHHHHHHHHhCCcccCCCCcCccCCCCCCCCC
Confidence            99998999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEecceeecccCCCchhhhhhcccCCCCCCChH
Q 010067          254 FFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAELTAGYYNLNDRDGYR  333 (519)
Q Consensus       254 FF~~~g~~~s~YGrFFL~WYs~~L~~Hgdril~~A~~~F~g~~v~l~aKv~GIHWwy~t~SHaAElTAGyYN~~~rdGY~  333 (519)
                      ||+++|+|+|+||||||+|||++|++||||||+.|+++|++++|+|+||||||||||+|+|||||||||||||++||||+
T Consensus       242 FF~~~G~~~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rDGY~  321 (490)
T d1wdpa1         242 FFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYR  321 (490)
T ss_dssp             TTSTTSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBCSSH
T ss_pred             CCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecccCCCCCChHHHhccccCCCCCccHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCcEEEEeeccccCCCCCCcCCCChHHHHHHHHHHhhhcCCeeeeccccccCChhHHHHHHHHhCCCCCCCC
Q 010067          334 PIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKE  413 (519)
Q Consensus       334 ~Ia~m~~rh~~~l~fTclEM~d~e~~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAL~~~d~~~~~qi~~~~~~~g~~~~  413 (519)
                      |||+|||||+|+|+||||||+|++||++++|+||+||+||+++|+++||+|+|||||+|||+++|+||++|+++++++.+
T Consensus       322 ~Ia~m~~rh~~~l~FTC~EM~d~eq~~~a~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qI~~~~~~~~~~~~  401 (490)
T d1wdpa1         322 PIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVNNN  401 (490)
T ss_dssp             HHHHHHHTTTCEEEECCTTCCGGGSCGGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCCCTT
T ss_pred             HHHHHHHHcCCeEEEecccccccCCCccccCCHHHHHHHHHHHHHHcCCceeeeccchhcCchHHHHHHHhcccccCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcceeEEecccccccCccchhHHHHHHHHhccCCCCCCCCCCCCCCCCcccccCCCCChHHHHHHccCCCCCCCC
Q 010067          414 GPPKLRMYGVTYLRLSDDLLAENNFKIFKIFVKKMHADQDYCPDPQKYNHEIDPLERSKPKFSNEELMEATKKLLPFPWD  493 (519)
Q Consensus       414 g~~~~~~~~FTylRm~~~lf~~~n~~~F~~FV~~m~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (519)
                      ++++.++++||||||++.||+++||++|++|||+||+++++|+++++|.|+|+||+||+|+||||+|+|||+|..||||+
T Consensus       402 ~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~~pl~~s~~~~~~~~~~~~~~~~~~~~~~  481 (490)
T d1wdpa1         402 GPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTLPFPWL  481 (490)
T ss_dssp             SSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTCCCCCCCCCCCCCCHHHHHHTTSCCCCCCCC
T ss_pred             CCcccccceeeeecCCHhhcCcchHHHHHHHHHHhccCCCCCCChHHcCCccCccccCCCCCCHHHHHHhcCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccCC
Q 010067          494 EETDMNVGG  502 (519)
Q Consensus       494 ~~~~~~~~~  502 (519)
                      +||||||+|
T Consensus       482 ~~~~~~~~~  490 (490)
T d1wdpa1         482 PETDMKVDG  490 (490)
T ss_dssp             SSCSSCSCC
T ss_pred             CCCCCCCCC
Confidence            999999997
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure