Citrus Sinensis ID: 010191
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LMX4 | 613 | Probable inactive purple | yes | no | 0.992 | 0.833 | 0.755 | 0.0 | |
| Q5MAU8 | 611 | Probable inactive purple | no | no | 0.970 | 0.818 | 0.686 | 0.0 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.941 | 0.788 | 0.661 | 0.0 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.481 | 0.673 | 0.697 | 1e-107 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.840 | 0.660 | 0.313 | 4e-50 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.831 | 0.657 | 0.322 | 3e-48 | |
| Q8BX37 | 438 | Iron/zinc purple acid pho | no | no | 0.541 | 0.636 | 0.289 | 8e-19 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.607 | 0.716 | 0.274 | 1e-18 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.568 | 0.686 | 0.248 | 2e-17 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.471 | 0.530 | 0.267 | 2e-17 |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/512 (75%), Positives = 440/512 (85%), Gaps = 1/512 (0%)
Query: 1 MRE-LRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MRE L +I + ++ VLGA SHEDQPLS IA+HK F L++ AY+KASP++LG GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSP 119
+S+ + V+Y+SP PS DWIGVFSP++F++STCP +N V PP LCSAP+KFQYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
+Y +TG GSLKLQLINQRSDFSF LF+ GLLNPK+VA+SNKV F NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AEP VEWG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN+ YTY++GHRL NG IWS EYQFK+SP+PGQ+S+QQV+IFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYN+FQR SLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY +DSGGECGV E MFYVP +NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
+ADTE DWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
RESLQKLWQKYKVDIA++GH HNYER CP+YQ
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQ 512
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/507 (68%), Positives = 401/507 (79%), Gaps = 7/507 (1%)
Query: 11 ILLVLGAF--RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWL 64
LLVL F +++ SHE DQ LS+I I+ A +A+I SP +LG +GQ+++W+
Sbjct: 5 FLLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWV 64
Query: 65 TVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKST 124
V ++P PS DW+GVFSP+ F SS+C + + P +CSAP+K+ YA SSP Y T
Sbjct: 65 NVVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKT 123
Query: 125 GKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMT 184
G LK LINQR+DFSF LFT GL NP +V+VSN V+F NP APVYPRLA GK W+EMT
Sbjct: 124 GNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMT 183
Query: 185 VTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244
VTWTSGY I EA PFVEW KG SPAGTLTF R SMCGAPARTVGWRDPG+IHT
Sbjct: 184 VTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTAS 243
Query: 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSN 304
L++LWPN YTY++GH L NG+ +WS + FK+SPYPGQDSLQ+VIIFGDMGK E DGSN
Sbjct: 244 LKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSN 303
Query: 305 EYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364
EYN++Q GSLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+
Sbjct: 304 EYNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMV 363
Query: 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE 424
ASGNHERDWP +GSFYG DSGGECGV E MF P EN+AKFWYS DYGMFRFC+ADTE
Sbjct: 364 ASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTE 423
Query: 425 QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS++ Y EGSF EPMGRESLQ
Sbjct: 424 HDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQ 483
Query: 485 KLWQKYKVDIAVFGHVHNYERICPIYQ 511
KLWQKYKVDIA +GHVHNYER CPIYQ
Sbjct: 484 KLWQKYKVDIAFYGHVHNYERTCPIYQ 510
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/487 (66%), Positives = 385/487 (79%), Gaps = 2/487 (0%)
Query: 26 DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGVFSPS 85
DQ L++I +++ ALD + + ASP +LG +G++++W+ + ++P P+ DWIGVFSP+
Sbjct: 29 DQALAQINVYETSLALDSSVKLHASPQVLGSQGEDTEWVNLAISNPKPTSDDWIGVFSPA 88
Query: 86 NFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVL 144
F S C P + P +CS+PIK+ Y N S P Y +G +LK Q+INQR+D SF L
Sbjct: 89 KFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPDYMKSGNVTLKFQIINQRADVSFAL 147
Query: 145 FTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204
F+NG+ P ++ VSN V F NP APVYPRLA GK W+EMTVTWTSGY I+EA PF+EW
Sbjct: 148 FSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNWDEMTVTWTSGYNIDEAVPFIEWSA 207
Query: 205 KGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFN 264
KG SPAGTLTF R SMCG PAR VGWRDPG+ HT FL+ELWPN Y Y+LGH L N
Sbjct: 208 KGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFFHTSFLKELWPNREYIYRLGHDLVN 267
Query: 265 GTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324
G+ IWS Y F +SPYPGQDS Q+VIIFGDMGK E DGSNEYN++Q GSLNTT Q+I+DL
Sbjct: 268 GSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDL 327
Query: 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMD 384
K+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTVPYMIASGNHERDWP TGSFY D
Sbjct: 328 KDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSFYAGTD 387
Query: 385 SGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444
SGGECGV E MFY P ENRAKFWY TDYGMFRFC+AD+E DWREGTEQY+FIE+CLA+V
Sbjct: 388 SGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLATV 447
Query: 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504
DR+ QPWLIF+AHRVLGYS++ Y EG+F EPMGRESLQKLWQKYKVD+A +GHVHNYE
Sbjct: 448 DRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGHVHNYE 507
Query: 505 RICPIYQ 511
R CPIY+
Sbjct: 508 RTCPIYE 514
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 173/248 (69%), Positives = 205/248 (82%)
Query: 264 NGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD 323
+G+ +W+ Y F+A P PGQ+SLQ++I+FGDMGK E DGSNE+ N+Q GSLNTT +LI+D
Sbjct: 20 DGSVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 79
Query: 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNM 383
L N DIVFHIGD+ YANGY+SQWDQFTAQ+ PI++ PYM+ASGNHERDWP TG F+
Sbjct: 80 LDNYDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVK 139
Query: 384 DSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443
DSGGECGV E M+Y P ENRA FWY DYGMFRFC+ D+E DWREGT QY+FIE CL++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503
VDR+ QPWLIF AHRVLGYSS+ YA +GSF EP GRESLQKLWQ+Y+VDIA FGHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 504 ERICPIYQ 511
ER CP+YQ
Sbjct: 260 ERTCPLYQ 267
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 250/516 (48%), Gaps = 83/516 (16%)
Query: 38 VFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPN-PSVGDWIGVFSPSNFSSSTCPAEN 96
V + D A I SP+ L G D + ++++ + PS DW+G++SP E+
Sbjct: 17 VSSADSKATISISPNALNRSG---DSVVIQWSGVDSPSDLDWLGLYSP---------PES 64
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ N SS G GS+ L L N RS+++F +F + ++PK
Sbjct: 65 PNDHF-------IGYKFLNESSTW--KDGFGSISLPLTNLRSNYTFRIFRWSESEIDPKH 115
Query: 154 -------------VVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++A S ++TF + P L+ + N M V + +G G E F
Sbjct: 116 KDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERF 172
Query: 200 VEWGPKGGDRTYSPAGT-LTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
V +G S A + + R MC +PA T+GWRDPG+I ++ L Y Y+
Sbjct: 173 VRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQ 232
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNF---QRGSL 314
+G + + WS + + A ++++ +FGDMG + Y F Q S+
Sbjct: 233 VG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMG-----CATPYTTFIRTQDESI 281
Query: 315 NTTRQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370
+T + +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE
Sbjct: 282 STVKWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHE 341
Query: 371 RDWPG-------TGSFYGNMDSGGECGVLVENMFYVPTENRA----------KFWYSTDY 413
D+ S YGN D GGECGV F +P + +YS D
Sbjct: 342 YDFSTQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDM 400
Query: 414 GMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS 473
G F TE ++ +G QY FI+ L SVDR+K P+++ HR + +S+ V +
Sbjct: 401 GTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN---EVRDT 457
Query: 474 FAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509
E L+ L+ K V +A++GHVH YER CPI
Sbjct: 458 MIRQKMVEHLEPLFVKNNVTLALWGHVHRYERFCPI 493
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 239/509 (46%), Gaps = 81/509 (15%)
Query: 45 AYIKASPSILGMKGQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPL 103
A I SP L G D + ++++ +PS DW+G++SP P
Sbjct: 22 ATISISPQTLNRSG---DIVVIKWSGVESPSDLDWLGIYSP----------------PDS 62
Query: 104 LCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK-------- 153
I +++ + SP ++S G GS+ L L N RS+++F +F T +NPK
Sbjct: 63 PHDHFIGYKFLS-DSPTWQS-GSGSISLPLTNLRSNYTFRIFHWTQSEINPKHQDHDHNP 120
Query: 154 ------VVAVSNKVTFT-NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKG 206
++ SN++ F N P L+ NEM V + +G G + E K
Sbjct: 121 LPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDGEEREARYGEVKDKL 180
Query: 207 GDRTYSPAGTLTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNG 265
+ + A + + MC APA TVGWRDPG+ ++ L Y Y++G L
Sbjct: 181 DN--IAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKG- 237
Query: 266 TYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRG---SLNTTRQLIQ 322
WS + F + +++L +FGDMG Y F RG SL+T + +++
Sbjct: 238 ---WSEIHSFVSRNEGSEETL--AFMFGDMG-----CYTPYTTFIRGEEESLSTVKWILR 287
Query: 323 DLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGT- 376
D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNHE DWP
Sbjct: 288 DIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQP 347
Query: 377 -----GSFYGNMDSGGECGVLVENMFYVP---TE--------NRAKFWYSTDYGMFRFCI 420
++ DSGGECGV F +P TE +YS D G F
Sbjct: 348 WKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVY 407
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
TE D+ +G +QY F++ L SV+R K P+++ HR + +S + + E M
Sbjct: 408 ISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTS--RKIRDAAIREKM-I 464
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPI 509
E L+ L K V +A++GHVH YER C I
Sbjct: 465 EHLEPLLVKNNVTVALWGHVHRYERFCAI 493
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8BX37|PAPL_MOUSE Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2 | Back alignment and function description |
|---|
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 150/352 (42%), Gaps = 73/352 (20%)
Query: 183 MTVTWTSGYGINEAEPFVEWGPKGGDRTYSP--AGTLTFGRGSMCGAPARTVGWRDPGYI 240
MTVTWT+ W P + + +G L F A R YI
Sbjct: 46 MTVTWTT------------WAPARSEVQFGSQLSGPLPFRAHGTARAFVDGGVLRRKLYI 93
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
H LR+L P A Y Y+ G + WS ++F A G ++ +FGDMG D
Sbjct: 94 HRVTLRKLQPGAQYVYRCG-----SSQGWSRRFRFTALKN-GVHWSPRLAVFGDMGADNP 147
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICY----ANGYISQWDQFTAQIEPI 356
+L R+ Q D V H+GD Y N + D+F IEP+
Sbjct: 148 K-----------ALPRLRRDTQQ-GMFDAVLHVGDFAYNMDQDNARVG--DRFMRLIEPV 193
Query: 357 ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMF 416
A+++PYM GNHE+ + + N + F +P +N WYS D G
Sbjct: 194 AASLPYMTCPGNHEQRYN-----FSNYKA----------RFSMPGDNEG-LWYSWDLGPA 237
Query: 417 RFCIADTEQDW-----REGTE-QYRFIEHCL--ASVDRQKQPWLIFLAHRVLGYS-SDL- 466
TE + R E Q+R++E+ L A+ +R +PW+I + HR + S +DL
Sbjct: 238 HIISFSTEVYFFLHYGRHLIEKQFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADLD 297
Query: 467 ------SYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQW 512
S +G + G L+ L+ KY VD+ + H H+YER+ PIY +
Sbjct: 298 DCTRHESRVRKGLHGKLFG---LEDLFHKYGVDLEFWAHEHSYERLWPIYNY 346
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 165/390 (42%), Gaps = 77/390 (19%)
Query: 141 SFVLFTNGLLNPKVVAVSNKVTFTNP-----------NAPVYPRLAQ----GKVWNEMTV 185
SF LF L+P V + FT P YP+ GK + M V
Sbjct: 12 SFSLF---FLSPFVCQANYDSNFTRPPPRPLFIVSHGRPKFYPQQVHISLAGK--DHMRV 66
Query: 186 TWTSGYGINEAEPFVEWG--PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243
T+T+ +N A VE+G PK D+ + T + T + + G IH
Sbjct: 67 TYTTD-DLNVAS-MVEYGKHPKKYDKKTAGEST------------SYTYFFYNSGKIHHV 112
Query: 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP--YPGQDSLQQVIIFGDMGKDEAD 301
+ L PN Y Y+ G E+ FK P +P + + GD+G+ +
Sbjct: 113 KIGPLKPNTKYYYRCGGH--------GDEFSFKTPPSKFP-----IEFAVAGDLGQTDW- 158
Query: 302 GSNEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
T R L Q K + D+ GD+ YA+ + WD F +E +AST
Sbjct: 159 --------------TVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTR 204
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
P+M+ GNHE + SF N + M + + + + +YS D +
Sbjct: 205 PWMVTEGNHEIE-----SFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVM 259
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
+ + ++QY +++ L VDR+K PWL+ + H YS++ ++ EG E M R
Sbjct: 260 LGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH-TPWYSTNKAHYGEG---EKM-R 314
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIY 510
+L+ L + +VD+ GHVH YER PIY
Sbjct: 315 SALESLLYRAQVDVVFAGHVHTYERFKPIY 344
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 156/362 (43%), Gaps = 69/362 (19%)
Query: 164 TNPNAPVYPRLAQGKVW--NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGR 221
TN + P +P + ++M ++W + I+ P V +G G S GT
Sbjct: 36 TNEDDPTFPDQVHISLVGPDKMRISWITQSSIS---PSVVYGTVSGKYEGSANGT----- 87
Query: 222 GSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP-- 279
+ + +R G I+ + L PN +Y YK G + E+ F+ P
Sbjct: 88 ---SSSYHYLLIYRS-GQINDVVIGPLKPNTVYYYKCGGPSS------TQEFSFRTPPSK 137
Query: 280 YPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYA 339
+P + + GD+G E + + +L + + D+ GD+ YA
Sbjct: 138 FP-----IKFAVSGDLGTSE---------WSKSTLEHVSKW-----DYDVFILPGDLSYA 178
Query: 340 NGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF-- 397
N Y WD F ++P+AS P+M+ GNHE + + +L N F
Sbjct: 179 NMYQPLWDTFGRLVQPLASQRPWMVTHGNHELE---------------KIPILHSNPFTA 223
Query: 398 -----YVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQ 449
+P E + + +YS + + + D+ G+EQY+++E+ L +DR+
Sbjct: 224 YNKRWRMPFEESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTT 283
Query: 450 PWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509
PW++ + H Y+S+ ++ E E +ES++ L K +VD+ GHVH YER +
Sbjct: 284 PWVVAVVHAPW-YNSNEAHQGEKESVE--MKESMETLLYKARVDLVFAGHVHAYERFSRV 340
Query: 510 YQ 511
YQ
Sbjct: 341 YQ 342
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 127/303 (41%), Gaps = 60/303 (19%)
Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIF-GDMG 296
G IH + L P Y Y+ G + S E F+ P P +D+ I F GD+G
Sbjct: 140 GIIHHVLIDGLEPETRYYYRCGD---SSVPAMSEEISFETLPLPSKDAYPHRIAFVGDLG 196
Query: 297 KDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS------------ 344
+ T L+++ ++ I+ +GD+ YAN Y +
Sbjct: 197 ------------LTSNTTTTIDHLMENDPSLVII--VGDLTYANQYRTIGGKGVPCFSCS 242
Query: 345 ------------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVL 392
+WD + +EP+ S VP M+ GNHE + +G + +
Sbjct: 243 FPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSY--------- 293
Query: 393 VENMFYVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQ 449
F VP + + +YS D G F + D+ QY +++ L+ VDR
Sbjct: 294 -SERFAVPASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVT 352
Query: 450 PWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509
PWL+ H Y+S S+ E E M R+ +++L +Y+VDI GHVH YER+ I
Sbjct: 353 PWLVATMHPPW-YNSYSSHYQE---FECM-RQEMEELLYQYRVDIVFAGHVHAYERMNRI 407
Query: 510 YQW 512
Y +
Sbjct: 408 YNY 410
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | ||||||
| 297738089 | 672 | unnamed protein product [Vitis vinifera] | 0.992 | 0.760 | 0.810 | 0.0 | |
| 359472541 | 612 | PREDICTED: probable inactive purple acid | 0.992 | 0.834 | 0.810 | 0.0 | |
| 224112110 | 614 | predicted protein [Populus trichocarpa] | 0.992 | 0.832 | 0.810 | 0.0 | |
| 18075960 | 612 | putative metallophosphatase [Lupinus lut | 0.992 | 0.834 | 0.780 | 0.0 | |
| 224098974 | 621 | predicted protein [Populus trichocarpa] | 0.992 | 0.822 | 0.771 | 0.0 | |
| 449452841 | 612 | PREDICTED: probable inactive purple acid | 0.992 | 0.834 | 0.776 | 0.0 | |
| 255542026 | 615 | hydrolase, putative [Ricinus communis] g | 0.949 | 0.795 | 0.816 | 0.0 | |
| 356567597 | 611 | PREDICTED: probable inactive purple acid | 0.970 | 0.818 | 0.786 | 0.0 | |
| 356526862 | 616 | PREDICTED: probable inactive purple acid | 0.970 | 0.811 | 0.78 | 0.0 | |
| 18075958 | 615 | diphosphonucleotide phosphatase 1 [Lupin | 0.990 | 0.829 | 0.771 | 0.0 |
| >gi|297738089|emb|CBI27290.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/511 (81%), Positives = 457/511 (89%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR + L IL L ISH DQPL+KIAIH A FAL D AY+KASP++LG+ GQN
Sbjct: 61 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 120
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++++TVE++SP+PSV DWIGVFSP+NFS+STC E+ RV PPLLCSAPIK+QYANY+SP
Sbjct: 121 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 180
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TGKGSLKLQLINQRSDFSF LF+ GL+NPK+VAVSN V F NPNAPVYPRLAQGKVW
Sbjct: 181 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 240
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A PF+EWG KGGD+ SPAGTLTF R SMCGAPA TVGWRDPGYI
Sbjct: 241 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 300
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN +Y+YKLGHRLFNGTYIWS +YQF+ASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 301 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 360
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +QRGSLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 361 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 420
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPGTGSFYGN+DSGGECGVL E MFYVP ENRAKFWYSTD+GMFRFCI
Sbjct: 421 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 480
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMGR
Sbjct: 481 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 540
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
+ LQKLWQKYKVDIA++GHVHNYER CPIYQ
Sbjct: 541 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQ 571
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472541|ref|XP_002274118.2| PREDICTED: probable inactive purple acid phosphatase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/511 (81%), Positives = 457/511 (89%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR + L IL L ISH DQPL+KIAIH A FAL D AY+KASP++LG+ GQN
Sbjct: 1 MRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQN 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++++TVE++SP+PSV DWIGVFSP+NFS+STC E+ RV PPLLCSAPIK+QYANY+SP
Sbjct: 61 TEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPN 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TGKGSLKLQLINQRSDFSF LF+ GL+NPK+VAVSN V F NPNAPVYPRLAQGKVW
Sbjct: 121 YKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGIN+A PF+EWG KGGD+ SPAGTLTF R SMCGAPA TVGWRDPGYI
Sbjct: 181 NEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN +Y+YKLGHRLFNGTYIWS +YQF+ASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 241 HTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN +QRGSLNTT+QLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQ+E I STV
Sbjct: 301 DGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPGTGSFYGN+DSGGECGVL E MFYVP ENRAKFWYSTD+GMFRFCI
Sbjct: 361 PYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCI 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
+ LQKLWQKYKVDIA++GHVHNYER CPIYQ
Sbjct: 481 DDLQKLWQKYKVDIAMYGHVHNYERTCPIYQ 511
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224112110|ref|XP_002316086.1| predicted protein [Populus trichocarpa] gi|222865126|gb|EEF02257.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/512 (81%), Positives = 454/512 (88%), Gaps = 1/512 (0%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR L + ILLVL ++ SH +QPLS+IA+H L +NA IKASPS+LG+KGQN
Sbjct: 2 MRGLELVFFAILLVLATLQVANSHGEQPLSRIAVHNTRLQLFENADIKASPSVLGLKGQN 61
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSP 119
S+W+T+EY SPNPS DWIGVFSP+NFS+STC P + + PP LC+APIK+QYANYSSP
Sbjct: 62 SEWVTLEYASPNPSNDDWIGVFSPANFSASTCNPDDGSKQAPPFLCTAPIKYQYANYSSP 121
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
Y+ GKGSL+LQLINQRSDFSFVLF+ GL NPKVVAVSNKV FTNPNAPVYPRLAQGK+
Sbjct: 122 GYRKEGKGSLRLQLINQRSDFSFVLFSGGLTNPKVVAVSNKVAFTNPNAPVYPRLAQGKI 181
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
WNEMTVTWTSGYGINEAEPFVEWG K GD SPAGTLTF R SMCGAPARTVGWRDPG+
Sbjct: 182 WNEMTVTWTSGYGINEAEPFVEWGRKDGDHMRSPAGTLTFNRNSMCGAPARTVGWRDPGF 241
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN++YTYKLGH+LFNGTY+WS YQF+ASPYPGQ S+Q+V+IFGDMGKDE
Sbjct: 242 IHTSFLKELWPNSVYTYKLGHKLFNGTYVWSQVYQFRASPYPGQSSVQRVVIFGDMGKDE 301
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
ADGSNEYNNFQRGSLNTT+QLIQDLKNIDIVFHIGDICYANGY+SQWDQFTAQ+EPIAST
Sbjct: 302 ADGSNEYNNFQRGSLNTTKQLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQVEPIAST 361
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHERDWPGTGSFYGN DSGGECGVL E MFYVP ENRAKFWYSTDYGMFRFC
Sbjct: 362 VPYMIASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFC 421
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
IADTE DWREGTEQY+FIEHCLAS DRQKQPWLIFLAHRVLGYSS YA +GSF EPMG
Sbjct: 422 IADTEHDWREGTEQYKFIEHCLASADRQKQPWLIFLAHRVLGYSSATWYADQGSFEEPMG 481
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
RESLQKLWQKYKVDIA++GHVHNYER CPIYQ
Sbjct: 482 RESLQKLWQKYKVDIAMYGHVHNYERTCPIYQ 513
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18075960|emb|CAD12837.1| putative metallophosphatase [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/511 (78%), Positives = 451/511 (88%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
M + + + LG LLV +L SH D PLSK++IH+A +L D A+IK SP ILG++GQ
Sbjct: 1 MGDSKFVFLGYLLVCSVLQLVWSHGDHPLSKVSIHRASLSLLDLAHIKVSPPILGLQGQT 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T+EY+SP PS+ DWIGVFSPSNFS+S CPAEN RVYPPLLCSAPIK+QYANYS+PQ
Sbjct: 61 AEWVTLEYSSPIPSIDDWIGVFSPSNFSASACPAENRRVYPPLLCSAPIKYQYANYSNPQ 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
Y +TGKG LKLQLINQRSDFSF +F+ GL NPKVVA+SNK++F NPNAPVYPRLA GK+W
Sbjct: 121 YSATGKGILKLQLINQRSDFSFAMFSGGLSNPKVVAISNKISFANPNAPVYPRLAMGKLW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGINEA+P V+WGPKGGD +SPAGTLTF + S+CGAPARTVGWRDPG+I
Sbjct: 181 NEMTVTWTSGYGINEADPLVQWGPKGGDHIHSPAGTLTFTKDSLCGAPARTVGWRDPGFI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT +L+ELWPN +Y YK+GHRL NGTYIWS YQF+A+P+PGQ SLQ+V IFGDMGKDE
Sbjct: 241 HTSYLKELWPNRIYEYKIGHRLNNGTYIWSQNYQFRAAPFPGQKSLQRVAIFGDMGKDEV 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQRGSLNTT+QLIQDL+NID+VFHIGDI YANGY+SQWDQFTAQ+EPIAS V
Sbjct: 301 DGSNEYNNFQRGSLNTTQQLIQDLENIDMVFHIGDISYANGYLSQWDQFTAQVEPIASAV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASG+HERDWPGTGSFY NMDSGGECGVL + MFYVP NRAKFWY DYGMFRF I
Sbjct: 361 PYMIASGSHERDWPGTGSFYENMDSGGECGVLAQIMFYVPASNRAKFWYPIDYGMFRFRI 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
ADTE DWREGTEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYSS + YA EGSFAEPMGR
Sbjct: 421 ADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCICYAEEGSFAEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
ESLQKLWQKYKVDIA++GHVHNYER CPIYQ
Sbjct: 481 ESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 511
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098974|ref|XP_002311341.1| predicted protein [Populus trichocarpa] gi|222851161|gb|EEE88708.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/521 (77%), Positives = 448/521 (85%), Gaps = 10/521 (1%)
Query: 1 MRELRSICLGILLVLGAF-RLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MR L + LVL ++T SH +QPLS+I + L +NAY+KASPSILG+KGQ
Sbjct: 1 MRGLGLVFFAFFLVLATLLQVTTSHGEQPLSRIVVQNTELHLSENAYVKASPSILGLKGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSS--------STC-PAENPRVYPPLLCSAPIK 110
N +W+T+EY SPNPS+ DWIGVFSP++FS+ STC P + ++ PP LC+APIK
Sbjct: 61 NFEWVTLEYASPNPSIDDWIGVFSPADFSAYFLSISTASTCTPDDGSKLAPPFLCTAPIK 120
Query: 111 FQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPV 170
+QYANYSSP Y+ TGKGSL+LQLINQRSDFS VLF+ GL NPK++AVSNKV FTNPNAPV
Sbjct: 121 YQYANYSSPGYRKTGKGSLRLQLINQRSDFSSVLFSGGLSNPKLMAVSNKVAFTNPNAPV 180
Query: 171 YPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPAR 230
YPRLAQGK+WNEMTVTWT GYGINEAEPFVEWG K GDR +S AGTLTF R S+CGAPAR
Sbjct: 181 YPRLAQGKIWNEMTVTWTCGYGINEAEPFVEWGQKDGDRMHSLAGTLTFDRNSLCGAPAR 240
Query: 231 TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVI 290
TVGWRDPG+IHT FL+ELWPNA+YTYKLGH+LFNGTY+WS EYQF+ASPYPGQ S+Q+V+
Sbjct: 241 TVGWRDPGFIHTSFLKELWPNAVYTYKLGHKLFNGTYVWSQEYQFRASPYPGQSSVQRVV 300
Query: 291 IFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT 350
IFGDMGKDEADGSNEYNN+QRGSLNTT+QL QDLKNIDIVFHIGDICYANGY+SQWDQFT
Sbjct: 301 IFGDMGKDEADGSNEYNNYQRGSLNTTKQLSQDLKNIDIVFHIGDICYANGYLSQWDQFT 360
Query: 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYS 410
AQ+EPIASTVPYM+ASGNHERDWPGTGSFYGN DSGGECGVL E MFYVP ENRA FWYS
Sbjct: 361 AQVEPIASTVPYMVASGNHERDWPGTGSFYGNSDSGGECGVLAETMFYVPAENRANFWYS 420
Query: 411 TDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV 470
TDYGM RFC ADTE DWRE TEQY+FIEHCLASVDRQKQPWLIFLAHRVLGYS YA
Sbjct: 421 TDYGMLRFCRADTEHDWREATEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSFSTFYAD 480
Query: 471 EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
EGSF EPMGRESLQKLWQKYKVDIA++GH HNYER CPIYQ
Sbjct: 481 EGSFEEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPIYQ 521
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452841|ref|XP_004144167.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/511 (77%), Positives = 448/511 (87%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
MR L +CLGIL +L SH + P SKIAI K FAL+ +A +KASPS+LG+KG+N
Sbjct: 1 MRFLGFVCLGILWILATLHQVKSHGNHPFSKIAIRKTTFALNKHANVKASPSVLGLKGEN 60
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T+EY+SP+PS DWIGVFSP+NFSSSTCP ENPRVYPPLLCSAPIKF +ANY++
Sbjct: 61 TEWVTLEYSSPDPSSDDWIGVFSPANFSSSTCPVENPRVYPPLLCSAPIKFLFANYTNAN 120
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK+TG+G LKLQLINQR+DFSF LF+ GL PKVVA+SN+VTF NP+AP+YPRLAQGK W
Sbjct: 121 YKTTGRGLLKLQLINQRADFSFALFSGGLSKPKVVAISNRVTFANPDAPLYPRLAQGKNW 180
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
NEMTVTWTSGYGI+EAEP V W G D SPAGTLTF R SMCGAPART GWRDPG+I
Sbjct: 181 NEMTVTWTSGYGIDEAEPLVAWSQNGKDLMQSPAGTLTFDRNSMCGAPARTEGWRDPGFI 240
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN YTYKLGH+L NGTYIWSS Y+FKASPYPGQ+SLQ+V+IFGDMGKDEA
Sbjct: 241 HTSFLKELWPNQEYTYKLGHKLNNGTYIWSSTYKFKASPYPGQNSLQRVVIFGDMGKDEA 300
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQRGSLNTTRQLI+DLKNIDIVFHIGDICYANGY+SQWDQFTAQI PIASTV
Sbjct: 301 DGSNEYNNFQRGSLNTTRQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTV 360
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWPG+GSFY MDSGGECGV+ +NMFYVP ENR KFWY+TDYGMFRFC+
Sbjct: 361 PYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNMFYVPAENREKFWYATDYGMFRFCV 420
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
A+TE DWREGTEQY+FIEHCL+SVDRQKQPWLIFLAHRVLGYSS YA +GS +EPMGR
Sbjct: 421 ANTELDWREGTEQYKFIEHCLSSVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGR 480
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
ESLQ LWQKYKVD+A++GHVH+YER CPIYQ
Sbjct: 481 ESLQSLWQKYKVDLAIYGHVHSYERTCPIYQ 511
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542026|ref|XP_002512077.1| hydrolase, putative [Ricinus communis] gi|223549257|gb|EEF50746.1| hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/491 (81%), Positives = 438/491 (89%), Gaps = 2/491 (0%)
Query: 23 SHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGVF 82
S QP S+IA HK F+L+ NAY+KASPSILG++GQNS+W+TVEY S NPS+ DWIGVF
Sbjct: 24 SQGGQPFSRIAFHKTTFSLNGNAYVKASPSILGIRGQNSEWITVEYTSTNPSIADWIGVF 83
Query: 83 SPSNFSSSTCPAENP--RVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDF 140
SP+NFS+S+C E+ +V PP LCSAP+KFQYANYSSP YK TGKGSL+L+LINQRSDF
Sbjct: 84 SPANFSASSCNPESSSSKVAPPFLCSAPVKFQYANYSSPGYKDTGKGSLRLRLINQRSDF 143
Query: 141 SFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFV 200
SF LF+ GL NPK+VAVSN V F NPNAPVYPRLAQGK+WNEMTVTWTSGYGINEAEPFV
Sbjct: 144 SFALFSGGLGNPKLVAVSNIVAFANPNAPVYPRLAQGKIWNEMTVTWTSGYGINEAEPFV 203
Query: 201 EWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGH 260
EWGPKGGD SPAGTLTF SMCG+PARTVGWRDPG+IHT FL+ELWPN +Y YKLGH
Sbjct: 204 EWGPKGGDLKRSPAGTLTFTPNSMCGSPARTVGWRDPGFIHTSFLKELWPNVLYKYKLGH 263
Query: 261 RLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQL 320
+L NGTYIWS +YQF+ASPYPGQ SLQ+V+IFGDMGKDE DGSNEYNNFQ GSLNTT+QL
Sbjct: 264 KLLNGTYIWSQDYQFRASPYPGQSSLQRVVIFGDMGKDEIDGSNEYNNFQHGSLNTTKQL 323
Query: 321 IQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFY 380
IQDLKNIDIVFHIGDICYANGYISQWDQFT+Q+EPIASTVPYMIASGNHERDWPGTGSFY
Sbjct: 324 IQDLKNIDIVFHIGDICYANGYISQWDQFTSQVEPIASTVPYMIASGNHERDWPGTGSFY 383
Query: 381 GNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440
GN DSGGECGV + MFYVPTENR FWYSTDYGMFRFCIADTE DWREGTEQY+FIEHC
Sbjct: 384 GNTDSGGECGVPAQTMFYVPTENRDNFWYSTDYGMFRFCIADTEHDWREGTEQYKFIEHC 443
Query: 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHV 500
LASVDRQKQPWL+FLAHRVLGYSS YA EGSF EPMGRESLQKLWQKYKVDIA++GHV
Sbjct: 444 LASVDRQKQPWLVFLAHRVLGYSSASWYADEGSFEEPMGRESLQKLWQKYKVDIAIYGHV 503
Query: 501 HNYERICPIYQ 511
HNYER CPIYQ
Sbjct: 504 HNYERTCPIYQ 514
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567597|ref|XP_003552004.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/500 (78%), Positives = 445/500 (89%)
Query: 12 LLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSP 71
+LVL F+ +S E QPLSK+AIHK ALD+ A+IKA+P++LG+KGQN++W+T++Y++P
Sbjct: 11 MLVLATFQKAVSEEHQPLSKVAIHKTTLALDERAFIKATPNVLGLKGQNTEWVTLQYSNP 70
Query: 72 NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKL 131
P+V DWIGVFSP+NF++STCPAEN V PP LCSAPIK+QYAN+SS YK+TGKGSLKL
Sbjct: 71 KPTVDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHGYKNTGKGSLKL 130
Query: 132 QLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGY 191
QLINQRSDFSF LFT GL NPK+VAVSNKV+F NPNAPVYPRLAQGK W+EMTVTWTSGY
Sbjct: 131 QLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTWDEMTVTWTSGY 190
Query: 192 GINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251
I++AEPFVEWGPKGG+ SPAGTLTF R +MCGAPARTVGWRDPGYIHT FL+ELWPN
Sbjct: 191 EISDAEPFVEWGPKGGNLVKSPAGTLTFDRNTMCGAPARTVGWRDPGYIHTSFLKELWPN 250
Query: 252 AMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQR 311
Y YKLGH+LFNGT IWS EYQFKASPYPGQ+SLQ+V+IFGDMGK EADGSNEYNNFQ
Sbjct: 251 REYKYKLGHKLFNGTIIWSQEYQFKASPYPGQNSLQRVVIFGDMGKAEADGSNEYNNFQP 310
Query: 312 GSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHER 371
GSLNTT+Q+IQDLK+IDIVF+IGD+ YANGY+SQWDQFTAQIEPIASTVPYM ASGNHER
Sbjct: 311 GSLNTTKQIIQDLKDIDIVFNIGDLSYANGYLSQWDQFTAQIEPIASTVPYMTASGNHER 370
Query: 372 DWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGT 431
DWP TGSFYGN+DSGGECGVL + MFYVP ENR KFWYS DYGMFRFCIA+TE DWR+G+
Sbjct: 371 DWPDTGSFYGNLDSGGECGVLAQTMFYVPAENREKFWYSVDYGMFRFCIANTELDWRKGS 430
Query: 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491
EQY+FIE+CLASVDRQKQPWLIFLAHRVLGYSS Y EGSF EPMGRE LQ LWQKYK
Sbjct: 431 EQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGREDLQYLWQKYK 490
Query: 492 VDIAVFGHVHNYERICPIYQ 511
VDIA++GHVHNYER CP+YQ
Sbjct: 491 VDIAMYGHVHNYERTCPVYQ 510
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526862|ref|XP_003532035.1| PREDICTED: probable inactive purple acid phosphatase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/500 (78%), Positives = 444/500 (88%)
Query: 12 LLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLTVEYNSP 71
LLVL F+ +S E QPLSK+AIHK ALD+ AYIKA+PS+LG+KGQN++W+T++Y++P
Sbjct: 16 LLVLATFQQVVSDEHQPLSKVAIHKTTLALDERAYIKATPSVLGLKGQNTEWVTLQYSNP 75
Query: 72 NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKL 131
P++ DWIGVFSP+NF++STCPAEN V PP LCSAPIK+QYAN+SS YK+TGKGSLKL
Sbjct: 76 KPTIDDWIGVFSPANFNASTCPAENIWVNPPFLCSAPIKYQYANFSSHGYKNTGKGSLKL 135
Query: 132 QLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGY 191
QLINQRSDFSF LFT GL NPK+VAVSNKV+F NPNAPVYPRLAQGK W+E+TVTWTSGY
Sbjct: 136 QLINQRSDFSFALFTGGLTNPKLVAVSNKVSFINPNAPVYPRLAQGKTWDEITVTWTSGY 195
Query: 192 GINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251
GI++AEPFVEWGPKGG+ SPAGTLTF +MCGAPARTVGWRDPGYIHT FL+ELWPN
Sbjct: 196 GISDAEPFVEWGPKGGNLVKSPAGTLTFDHNTMCGAPARTVGWRDPGYIHTSFLKELWPN 255
Query: 252 AMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQR 311
Y YKLGHRLFNGT IWS EYQFKASP+PGQ+SLQ+V+IFGD+GK EADGSNEYNNFQ
Sbjct: 256 QEYKYKLGHRLFNGTIIWSQEYQFKASPFPGQNSLQRVVIFGDLGKAEADGSNEYNNFQP 315
Query: 312 GSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHER 371
GSLNTT+Q++QDLK+IDIVFHIGD+CYA+GY+SQWDQFTAQIEPIASTVPYM ASGNHER
Sbjct: 316 GSLNTTKQIVQDLKDIDIVFHIGDLCYASGYLSQWDQFTAQIEPIASTVPYMTASGNHER 375
Query: 372 DWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGT 431
DWP TGSFYG +DSGGECGV + FYVP ENR KFWYS DYGMFRFCIA+TE DWR+G+
Sbjct: 376 DWPDTGSFYGTLDSGGECGVPAQTTFYVPAENREKFWYSVDYGMFRFCIANTELDWRKGS 435
Query: 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491
EQY+FIE+CLA+VDRQKQPWLIFLAHRVLGYSS YA EGSF EPMGRE LQ LWQKYK
Sbjct: 436 EQYKFIENCLATVDRQKQPWLIFLAHRVLGYSSAGFYAAEGSFEEPMGREDLQYLWQKYK 495
Query: 492 VDIAVFGHVHNYERICPIYQ 511
VDIA++GHVHNYER CP+YQ
Sbjct: 496 VDIAMYGHVHNYERTCPVYQ 515
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18075958|emb|CAD12836.1| diphosphonucleotide phosphatase 1 [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/511 (77%), Positives = 443/511 (86%), Gaps = 1/511 (0%)
Query: 1 MRELRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQN 60
M + R + L +LLV F+ +S + QPLSK+AIHK VFA+D++AYIKA+P++LG +G
Sbjct: 5 MEKSRMVFLYLLLV-ATFQQAVSDDTQPLSKVAIHKTVFAIDEHAYIKATPNVLGFEGHY 63
Query: 61 SDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQ 120
++W+T++Y++ PS+ DWIGVFSP+NFS+STCP EN PP LCSAPIKFQYAN+SS
Sbjct: 64 TEWVTLQYSNNKPSIDDWIGVFSPANFSASTCPGENKMTNPPFLCSAPIKFQYANFSSHS 123
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
YK TGKGSLKLQLINQRSDFSF LFT GL NPK++AVSNKV+F NPNAPVYPRLAQGK W
Sbjct: 124 YKDTGKGSLKLQLINQRSDFSFALFTGGLTNPKLIAVSNKVSFVNPNAPVYPRLAQGKTW 183
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
+E+TVTWTSGY IN+AEPFVEWGPK G+ +PAGTLTF R +MCGAPARTVGWRDPGYI
Sbjct: 184 DEITVTWTSGYDINDAEPFVEWGPKEGNLVKTPAGTLTFDRNTMCGAPARTVGWRDPGYI 243
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN YTYKLGHRLFNGT IWS EY FKASPYPGQ S+Q+V+IFGDMGK EA
Sbjct: 244 HTSFLKELWPNREYTYKLGHRLFNGTTIWSKEYHFKASPYPGQSSVQRVVIFGDMGKAEA 303
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYNNFQ GSLNTT+Q+IQDL++IDIVFHIGD+CYANGYISQWDQFTAQIEPIASTV
Sbjct: 304 DGSNEYNNFQPGSLNTTKQIIQDLEDIDIVFHIGDLCYANGYISQWDQFTAQIEPIASTV 363
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYM ASGNHERDWPGTGSFYGN+DSGGECGV + MF+VP ENR KFWYSTDYGMFRFCI
Sbjct: 364 PYMTASGNHERDWPGTGSFYGNLDSGGECGVPAQTMFFVPAENREKFWYSTDYGMFRFCI 423
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
A TE DWR+GTEQY FIE CLASVDRQKQPWLIFLAHRVLGYSS Y EGSF EPMGR
Sbjct: 424 AHTELDWRKGTEQYEFIEKCLASVDRQKQPWLIFLAHRVLGYSSAGFYVQEGSFEEPMGR 483
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
E LQ LWQKYKVDIA++GHVHNYER CPIYQ
Sbjct: 484 EDLQHLWQKYKVDIAMYGHVHNYERTCPIYQ 514
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 515 | ||||||
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 0.992 | 0.833 | 0.755 | 2.2e-224 | |
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.968 | 0.816 | 0.687 | 7e-196 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.974 | 0.816 | 0.645 | 1.1e-188 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.337 | 0.292 | 0.443 | 1.2e-52 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.846 | 0.664 | 0.327 | 4e-51 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.638 | 0.505 | 0.329 | 5.4e-51 | |
| DICTYBASE|DDB_G0268222 | 492 | DDB_G0268222 "acid phosphatase | 0.586 | 0.613 | 0.286 | 2.2e-22 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.489 | 0.584 | 0.292 | 2.2e-21 | |
| DICTYBASE|DDB_G0285351 | 454 | DDB_G0285351 [Dictyostelium di | 0.570 | 0.647 | 0.274 | 1.9e-18 | |
| FB|FBgn0030245 | 458 | CG1637 [Drosophila melanogaste | 0.466 | 0.524 | 0.293 | 7.2e-18 |
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2166 (767.5 bits), Expect = 2.2e-224, P = 2.2e-224
Identities = 387/512 (75%), Positives = 440/512 (85%)
Query: 1 MRE-LRSICLGILLVLGAFRLTISHEDQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQ 59
MRE L +I + ++ VLGA SHEDQPLS IA+HK F L++ AY+KASP++LG GQ
Sbjct: 1 MRESLVAILVTVISVLGAIHQVKSHEDQPLSGIAVHKITFGLNEKAYVKASPTVLGSNGQ 60
Query: 60 NSDWLTVEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSP 119
+S+ + V+Y+SP PS DWIGVFSP++F++STCP +N V PP LCSAP+KFQYAN+S+P
Sbjct: 61 HSELVLVQYSSPKPSDDDWIGVFSPADFNASTCPGDNKMVQPPRLCSAPVKFQYANFSNP 120
Query: 120 QYKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV 179
+Y +TG GSLKLQLINQRSDFSF LF+ GLLNPK+VA+SNKV F NPNAPVYPRLA GK
Sbjct: 121 RYTNTGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLALGKE 180
Query: 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239
W+EMTVTWTSGYG+N AEP VEWG KGG+R SPAGTLTF R SMCGAPARTVGWRDPGY
Sbjct: 181 WDEMTVTWTSGYGLNLAEPVVEWGVKGGERKLSPAGTLTFARNSMCGAPARTVGWRDPGY 240
Query: 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDE 299
IHT FL+ELWPN+ YTY++GHRL NG IWS EYQFK+SP+PGQ+S+QQV+IFGDMGK E
Sbjct: 241 IHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAE 300
Query: 300 ADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359
DGS+EYN+FQR SLNTT+QLI+DLK D VFHIGDICYANGY+SQWDQF AQIEPIAST
Sbjct: 301 VDGSSEYNDFQRASLNTTKQLIKDLKKTDAVFHIGDICYANGYLSQWDQFIAQIEPIAST 360
Query: 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFC 419
VPYMIASGNHER WP +GSFY +DSGGECGV E MFYVP +NRAK WYS+DYGMFRFC
Sbjct: 361 VPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFC 420
Query: 420 IADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479
+ADTE DWREGTEQY FIEHCLASVDRQKQPWLIFLAHRVLGYSS YA EGSFAEPMG
Sbjct: 421 VADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMG 480
Query: 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
RESLQKLWQKYKVDIA++GH HNYER CP+YQ
Sbjct: 481 RESLQKLWQKYKVDIAIYGHAHNYERTCPVYQ 512
|
|
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1897 (672.8 bits), Expect = 7.0e-196, P = 7.0e-196
Identities = 348/506 (68%), Positives = 401/506 (79%)
Query: 12 LLVLGAF--RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNSDWLT 65
LLVL F +++ SHE DQ LS+I I+ A +A+I SP +LG +GQ+++W+
Sbjct: 6 LLVLLWFIVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWVN 65
Query: 66 VEYNSPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTG 125
V ++P PS DW+GVFSP+ F SS+C + + P +CSAP+K+ YA SSP Y TG
Sbjct: 66 VVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAK-SSPDYMKTG 124
Query: 126 KGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTV 185
LK LINQR+DFSF LFT GL NP +V+VSN V+F NP APVYPRLA GK W+EMTV
Sbjct: 125 NAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVYPRLALGKKWDEMTV 184
Query: 186 TWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245
TWTSGY I EA PFVEW KG SPAGTLTF R SMCGAPARTVGWRDPG+IHT L
Sbjct: 185 TWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGAPARTVGWRDPGFIHTASL 244
Query: 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNE 305
++LWPN YTY++GH L NG+ +WS + FK+SPYPGQDSLQ+VIIFGDMGK E DGSNE
Sbjct: 245 KDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQDSLQRVIIFGDMGKGERDGSNE 304
Query: 306 YNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365
YN++Q GSLNTT QLI+DLKNIDIVFHIGDI YANGYISQWDQFTAQ+EPIASTVPYM+A
Sbjct: 305 YNDYQPGSLNTTDQLIKDLKNIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMVA 364
Query: 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425
SGNHERDWP +GSFYG DSGGECGV E MF P EN+AKFWYS DYGMFRFC+ADTE
Sbjct: 365 SGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEH 424
Query: 426 DWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQK 485
DWREG+EQY+FIE CLASVDR+ QPWLIF+AHRVLGYS++ Y EGSF EPMGRESLQK
Sbjct: 425 DWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESLQK 484
Query: 486 LWQKYKVDIAVFGHVHNYERICPIYQ 511
LWQKYKVDIA +GHVHNYER CPIYQ
Sbjct: 485 LWQKYKVDIAFYGHVHNYERTCPIYQ 510
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1829 (648.9 bits), Expect = 1.1e-188, P = 1.1e-188
Identities = 330/511 (64%), Positives = 395/511 (77%)
Query: 9 LGILLVLGAF---RLTISHE----DQPLSKIAIHKAVFALDDNAYIKASPSILGMKGQNS 61
LG+LL L A L + H DQ L++I +++ ALD + + ASP +LG +G+++
Sbjct: 5 LGVLLCLLALFSSSLCLDHANGRGDQALAQINVYETSLALDSSVKLHASPQVLGSQGEDT 64
Query: 62 DWLTVEYNSPNPSVGDWIGVFSPSNFSSSTC-PAENPRVYPPLLCSAPIKFQYANYSSPQ 120
+W+ + ++P P+ DWIGVFSP+ F S C P + P +CS+PIK+ Y N S P
Sbjct: 65 EWVNLAISNPKPTSDDWIGVFSPAKFDSGNCWPTSGGKEKTPYICSSPIKYMYCN-SHPD 123
Query: 121 YKSTGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVW 180
Y +G +LK Q+INQR+D SF LF+NG+ P ++ VSN V F NP APVYPRLA GK W
Sbjct: 124 YMKSGNVTLKFQIINQRADVSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLALGKNW 183
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
+EMTVTWTSGY I+EA PF+EW KG SPAGTLTF R SMCG PAR VGWRDPG+
Sbjct: 184 DEMTVTWTSGYNIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCGNPARGVGWRDPGFF 243
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
HT FL+ELWPN Y Y+LGH L NG+ IWS Y F +SPYPGQDS Q+VIIFGDMGK E
Sbjct: 244 HTSFLKELWPNREYIYRLGHDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGER 303
Query: 301 DGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360
DGSNEYN++Q GSLNTT Q+I+DLK+IDIVFHIGD+ Y+NGY+SQWDQFTAQ++PIASTV
Sbjct: 304 DGSNEYNDYQPGSLNTTDQVIKDLKDIDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTV 363
Query: 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420
PYMIASGNHERDWP TGSFY DSGGECGV E MFY P ENRAKFWY TDYGMFRFC+
Sbjct: 364 PYMIASGNHERDWPDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCV 423
Query: 421 ADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGR 480
AD+E DWREGTEQY+FIE+CLA+VDR+ QPWLIF+AHRVLGYS++ Y EG+F EPMGR
Sbjct: 424 ADSEHDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGR 483
Query: 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
ESLQKLWQKYKVD+A +GHVHNYER CPIY+
Sbjct: 484 ESLQKLWQKYKVDLAFYGHVHNYERTCPIYE 514
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 82/185 (44%), Positives = 112/185 (60%)
Query: 330 VFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPG-----TGSFYGNMD 384
V HIGDI YA G WD F ++PI S VPYM++ GNHE D+ G + S YG+ D
Sbjct: 325 VHHIGDISYARGKAFIWDYFMDSMQPIVSKVPYMVSIGNHEYDFIGQPFAPSWSNYGS-D 383
Query: 385 SGGECGVLVENMFYVP-TENRAK-FWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLA 442
SGGECGV F++ E+ + W+S + G F + E D+ G+ Q+ ++ + LA
Sbjct: 384 SGGECGVPYSKRFHMTGAEDSTRNLWFSYENGPIHFTVMSAEHDFLPGSPQFEWLNNDLA 443
Query: 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHN 502
SVDR+K PW+IF HR L Y+S L GS RE+++ L+QKY VD+A++GHVH
Sbjct: 444 SVDREKTPWVIFSGHRPL-YTSALPEDSIGSITAL--REAIEPLFQKYDVDMALWGHVHI 500
Query: 503 YERIC 507
YER C
Sbjct: 501 YERTC 505
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 168/513 (32%), Positives = 256/513 (49%)
Query: 38 VFALDDNAYIKASPSILGMKGQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAEN 96
V + D A I SP+ L G D + ++++ +PS DW+G++SP P E+
Sbjct: 17 VSSADSKATISISPNALNRSG---DSVVIQWSGVDSPSDLDWLGLYSP--------P-ES 64
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ N SS +K G GS+ L L N RS+++F +F + ++PK
Sbjct: 65 PNDHF-------IGYKFLNESST-WKD-GFGSISLPLTNLRSNYTFRIFRWSESEIDPKH 115
Query: 154 -------------VVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++A S ++TF + P L+ + N M V + +G G E F
Sbjct: 116 KDHDQNPLPGTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNTMRVMFVAGDG---EERF 172
Query: 200 VEWGPKGGDRTYSPAGT-LTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
V +G S A + + R MC +PA T+GWRDPG+I ++ L Y Y+
Sbjct: 173 VRYGESKDLLGNSAAARGMRYEREHMCDSPANSTIGWRDPGWIFDTVMKNLNDGVRYYYQ 232
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT 317
+G + + WS + + A ++++ +FGDMG A + Q S++T
Sbjct: 233 VG----SDSKGWSEIHSYIARDVTAEETV--AFMFGDMGC--ATPYTTFIRTQDESISTV 284
Query: 318 RQLIQDLKNID----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD- 372
+ +++D++ + ++ HIGDI YA GY WD+F AQ+EPIASTVPY + GNHE D
Sbjct: 285 KWILRDIEALGDKPAMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDF 344
Query: 373 ----W-PG-TGSFYGNMDSGGECGVLVENMFYVP------TENRA----KFWYSTDYGMF 416
W P S YGN D GGECGV F +P T +A +YS D G
Sbjct: 345 STQPWKPDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTV 403
Query: 417 RFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476
F TE ++ +G QY FI+ L SVDR+K P+++ HR + Y++ S V +
Sbjct: 404 HFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPM-YTT--SNEVRDTMIR 460
Query: 477 PMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509
E L+ L+ K V +A++GHVH YER CPI
Sbjct: 461 QKMVEHLEPLFVKNNVTLALWGHVHRYERFCPI 493
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 131/398 (32%), Positives = 192/398 (48%)
Query: 39 FALDDNAYIKASPSILGMK-GQNSDWLTVEYNS-PNPSVGDWIGVFSPSNFSSSTCPAEN 96
F L + Y KA+ SI ++ D + ++++ +PS DW+G++SP P ++
Sbjct: 12 FLLISSVYSKATISISPQTLNRSGDIVVIKWSGVESPSDLDWLGIYSP--------P-DS 62
Query: 97 PRVYPPLLCSAPIKFQYANYSSPQYKSTGKGSLKLQLINQRSDFSFVLF--TNGLLNPK- 153
P + I +++ + SP ++S G GS+ L L N RS+++F +F T +NPK
Sbjct: 63 PHDHF-------IGYKFLS-DSPTWQS-GSGSISLPLTNLRSNYTFRIFHWTQSEINPKH 113
Query: 154 -------------VVAVSNKVTFTNP-NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPF 199
++ SN++ F N P L+ NEM V + +G G E E
Sbjct: 114 QDHDHNPLPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNINEMRVVFVTGDG-EERE-- 170
Query: 200 VEWGP-KGGDRTYSPAGTLTFGRGSMCGAPAR-TVGWRDPGYIHTGFLRELWPNAMYTYK 257
+G K + A + + MC APA TVGWRDPG+ ++ L Y Y+
Sbjct: 171 ARYGEVKDKLDNIAVARGVRYEIEHMCHAPANSTVGWRDPGWTFDAVMKNLKQGIRYYYQ 230
Query: 258 LGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRG---SL 314
+G L G WS + F + +++L +FGDMG Y F RG SL
Sbjct: 231 VGSDL-KG---WSEIHSFVSRNEGSEETL--AFMFGDMGC-----YTPYTTFIRGEEESL 279
Query: 315 NTTRQLIQDLKNID-----IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNH 369
+T + +++D++ + IV HIGDI YA GY WD+F QIEPIAS VPY + GNH
Sbjct: 280 STVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNH 339
Query: 370 ERDWPG-------TGSFYGNMDSGGECGVLVENMFYVP 400
E DWP YG DSGGECGV F +P
Sbjct: 340 EYDWPNQPWKPDWAAYVYGK-DSGGECGVPYSVKFNMP 376
|
|
| DICTYBASE|DDB_G0268222 DDB_G0268222 "acid phosphatase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 276 (102.2 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 100/349 (28%), Positives = 152/349 (43%)
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240
+EM ++W + I +A V++ D A T G ++ G W+ GY
Sbjct: 91 SEMMISWFTNGKIGDA--IVQFSESKSDLINYSANTNN-GVITVNGKSTTFSNWK--GYS 145
Query: 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEA 300
++ L L P Y Y+ G N I S F S +P + G K
Sbjct: 146 NSVVLTGLSPKTTYYYQCGGSSSN---ILSQTNYFTTSNFPTTTTANTS---GKNVKSTT 199
Query: 301 DGSNEYNNFQR---------GSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQ---- 345
+ + F G N T ++I++ L ++ HIGDI YA+ + Q
Sbjct: 200 TDNFQVTPFTAAVYADMGYGGGYNNTVKVIEENLSKYSLILHIGDIAYADYNKVEQGNQT 259
Query: 346 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
W F +EPI S VPYM A GNH+ FY + +S +N F +P +
Sbjct: 260 IWTNFLQALEPITSKVPYMTAPGNHD-------VFY-SFNS-------YQNTFNMPGSSN 304
Query: 405 AKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQP--WLIFLAHRVLGY 462
WYS DY F TE D T+QY++I++ L + R+K P W+I AHR
Sbjct: 305 QP-WYSYDYNGVHFLSYSTESDLAPFTQQYQWIKNDLETY-RKKNPSGWVIAYAHRPYYC 362
Query: 463 SSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
S+ + + + + + ++ +L+Q Y VDI + GH H YER P+YQ
Sbjct: 363 STQMDWCRKQTL-RALIESTIGELFQNYNVDIYLAGHTHAYERTVPVYQ 410
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 273 (101.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 87/297 (29%), Positives = 139/297 (46%)
Query: 231 TVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY--P-GQDSLQ 287
T+G+ G I+T + L P+ MY Y +G + N IWSS + F + + P G+
Sbjct: 80 TIGF--DGKINTAVMSSLSPSTMYFYCVGDKSLN---IWSSIFNFTTNQFDAPFGKVIPF 134
Query: 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN------- 340
FGDMG E D N + T LI + I I+ H+GDI YA+
Sbjct: 135 TTSFFGDMGWIEGDSLNS-------DVYTVDNLISRINEIQILHHVGDIAYADKQKPYNL 187
Query: 341 -GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
G + W++F I P++S +PY+ GNH+R F + V + + +
Sbjct: 188 PGNQTIWNKFQNSISPLSSHLPYLTCPGNHDR-------FI-------DLSVYTKT-WQM 232
Query: 400 PTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQP--WLIFLAH 457
P + + WYS DY F +E D+ + Q+ +IE+ L R+ P W++ +H
Sbjct: 233 PVDFESDSWYSYDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQY-RKSNPNGWIVMYSH 291
Query: 458 RVLGYSS---DLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
R Y S D ++ ++ + SL+ L KY VD+ + GH H+YER P+++
Sbjct: 292 RPF-YCSVVWDWCSNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFK 347
|
|
| DICTYBASE|DDB_G0285351 DDB_G0285351 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 100/364 (27%), Positives = 159/364 (43%)
Query: 181 NEMTVTWTSGYGINEAEPFVEWGPK--GGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238
N + +TW S I+ E GP + P T S+ + A T+ + G
Sbjct: 46 NSLRITWNS---IDLIE-----GPSLLYSTELFEPDNYAT--SNSITSSTAETIYYDTEG 95
Query: 239 Y---IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA------SPYPGQDSLQQV 289
+ +TG + L + +Y Y +G ++ N WS Y F + + G +
Sbjct: 96 FHSFTYTGLIENLSQSMIYFYCVGDKVTNQ---WSQLYNFTSRSDISDNSDSGSGGIDNE 152
Query: 290 II------FGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN--- 340
+I FGDMG + D N +++ ++N + + L V H+GDI YA+
Sbjct: 153 VIPFTSSWFGDMGYIDGDSLN--SDWY--TINNLKSISNQLS---FVTHVGDIAYADYSK 205
Query: 341 -----GYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN 395
G + W+ F + I I ST+PYM GNH+ SF G E +
Sbjct: 206 DSKYYGNETIWNNFLSSINSITSTLPYMTTPGNHD-------SF------GDEFSAYSKT 252
Query: 396 MFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQP--WLI 453
+ +PTE+ + WYS DY F +E + ++Q+ +IE+ L R P WLI
Sbjct: 253 -WQMPTEHHSNNWYSFDYNGVHFISISSEDTYIPLSDQHSWIENDLKQY-RNSNPNGWLI 310
Query: 454 FLAHRVL------GYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507
+HR G+ +D Y E + ++ + +SL+ L KY VD+ + GH H YE
Sbjct: 311 MYSHRPFYCNAKFGWCND-DYKDEKT-SKRLYIDSLEYLLYKYNVDLFISGHCHAYETSK 368
Query: 508 PIYQ 511
P+YQ
Sbjct: 369 PVYQ 372
|
|
| FB|FBgn0030245 CG1637 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 244 (91.0 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 86/293 (29%), Positives = 134/293 (45%)
Query: 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKD 298
+IH LR+L PNA Y+Y G + WS+ +QF+ P D + I+GDMG +
Sbjct: 108 FIHRVTLRDLEPNATYSYHCG-----SDFGWSAIFQFRTVPSASVDWSPSLAIYGDMGNE 162
Query: 299 EADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICY-ANGYISQ-WDQFTAQIEPI 356
A + R T R + D + H+GD Y N ++ D+F QIE +
Sbjct: 163 NAQ------SLARLQQETQRGMY------DAIIHVGDFAYDMNTKNARVGDEFMRQIETV 210
Query: 357 ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV----PTEN---RAKFWY 409
A+ +PYM+ GNHE + ++ G G ENMFY P + +Y
Sbjct: 211 AAYLPYMVVPGNHEEKF-NFSNYRARFSMPG--GT--ENMFYSFDLGPVHFVGISTEVYY 265
Query: 410 STDYGMFRFCIADTEQDW-REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS---- 464
+YG+ + +W RE + E+ R K+PW+I HR + S+
Sbjct: 266 FLNYGLKPLVF---QFEWLREDLAKANLPEN------RNKRPWIILYGHRPMYCSNENDN 316
Query: 465 DLSYA-----VEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQW 512
D +++ V F G E L L++ + VD+A++ H H+YER+ PIY +
Sbjct: 317 DCTHSETLTRVGWPFVHMFGLEPL--LYE-FGVDVAIWAHEHSYERLWPIYDY 366
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LMX4 | PPA1_ARATH | No assigned EC number | 0.7558 | 0.9922 | 0.8336 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 515 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 4e-65 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-19 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-14 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 0.004 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 4e-65
Identities = 81/230 (35%), Positives = 117/230 (50%), Gaps = 26/230 (11%)
Query: 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ- 345
+ +FGDMG++ + S NT L ++L N D + H+GD+ YA+GY +
Sbjct: 5 FKFAVFGDMGQNTNN-----------STNTLDHLEKELGNYDAILHVGDLAYADGYNNGS 53
Query: 346 -WDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
WD F QIEP+AS VPYM+ GNHE D+ + + P+ +
Sbjct: 54 RWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFP-------RFRFPHSPSGST 106
Query: 405 AKFWYSTDYGMFRFCIADTEQDWR---EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLG 461
+ WYS D G F TE D+ G+ QY ++E LA VDR K PW+I + HR +
Sbjct: 107 SNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPM- 165
Query: 462 YSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
Y S+ + + R +L+ L+ KY VD+ + GHVH YER CP+Y
Sbjct: 166 YCSNTDHDDCIEGEK--MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYN 213
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 91.3 bits (226), Expect = 1e-19
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 41/279 (14%)
Query: 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGK 297
G I+ + L PN +Y YK G SS +F P + ++ + GD+G
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGP--------SSTQEFSFRTPPSKFPIK-FAVSGDLGT 150
Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIA 357
E + + +L + + D+ GD+ YAN Y WD F ++P+A
Sbjct: 151 SE---------WTKSTLEHVSK-----WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLA 196
Query: 358 STVPYMIASGNHERD-----WPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTD 412
S P+M+ GNHE + P + Y M + + + + +YS +
Sbjct: 197 SQRPWMVTHGNHELEKIPILHPEKFTAYNAR----------WRMPFEESGSTSNLYYSFN 246
Query: 413 YGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG 472
+ + D+ G+EQY+++E+ L +DR+ PW++ + H Y+S+ ++ E
Sbjct: 247 VYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK 305
Query: 473 SFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
+ES++ L K +VD+ GHVH YER +YQ
Sbjct: 306 ESVGM--KESMETLLYKARVDLVFAGHVHAYERFDRVYQ 342
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 71.3 bits (174), Expect = 2e-14
Identities = 36/215 (16%), Positives = 58/215 (26%), Gaps = 31/215 (14%)
Query: 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ 348
+++ GD+ L +L+ + K D+V +GD+ S
Sbjct: 2 ILVIGDLH---------GGLDDLDLLLLLLELLGEPKP-DLVLFLGDLVDRGPP-SLEVL 50
Query: 349 FTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFW 408
+ + P + GNH D+ S G
Sbjct: 51 ALLFALKLKAPGPVYLVRGNH--DFDSGNSELGFYL-------------ECAGLPYVLGN 95
Query: 409 YSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 468
G + G F+E + I L H S L
Sbjct: 96 GDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHG--PLSPSLDS 153
Query: 469 AVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503
G G E+L+ L + VD+ + GH H
Sbjct: 154 ---GDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 37.3 bits (86), Expect = 0.004
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370
+ + D V +GD+ +G + A + +P + GNH+
Sbjct: 18 EAALAAAEKPDFVLVLGDLVG-DGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.93 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.92 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.91 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.88 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.87 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.86 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.85 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.84 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.83 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.8 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.8 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.72 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.7 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.68 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.68 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.62 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.59 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.53 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.5 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.48 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.47 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.4 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.38 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.36 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.35 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.35 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.16 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.16 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.14 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.95 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.93 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.9 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.84 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.83 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.8 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.77 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.73 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.71 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.7 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.67 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.63 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.6 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.58 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.57 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.55 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.54 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.46 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.46 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.38 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.3 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.3 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.29 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.29 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.21 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.15 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.07 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.04 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.03 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.0 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.99 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.9 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.89 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.86 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.86 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.84 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.82 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.79 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.77 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.77 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.67 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.6 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.51 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.42 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 97.42 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.35 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.28 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.22 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.17 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.17 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.12 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.12 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 97.11 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.07 | |
| PHA02239 | 235 | putative protein phosphatase | 97.07 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 97.01 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.0 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 96.99 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.97 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.88 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.87 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.84 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.72 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.64 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.49 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.47 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.44 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.41 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.2 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.17 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.16 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.13 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.0 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.84 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 95.67 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.66 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.31 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 95.0 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 94.83 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 94.81 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.57 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 94.57 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 94.53 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 93.8 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.79 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 93.69 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 93.59 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 93.25 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 93.22 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 93.19 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 92.95 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 92.95 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 92.73 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.67 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 92.66 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 92.61 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 92.25 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 92.02 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 89.23 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 88.13 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 86.17 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 85.72 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 84.16 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-64 Score=519.62 Aligned_cols=306 Identities=44% Similarity=0.758 Sum_probs=250.5
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
++|+|+||++++..++|+|+|.|.+. ....|+||...+......+ ......+|+.... +|+..|++|+|+|+
T Consensus 43 ~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~---~~~~~~~~~~y~~--~~~~sg~ih~~~~~ 114 (452)
T KOG1378|consen 43 NSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAA---RGMTEAWTDGYAN--GWRDSGYIHDAVMK 114 (452)
T ss_pred CCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCcccccc---ccceEEEeccccc--ccceeeeEeeeeec
Confidence 67999999999998899999999964 3489999976444222111 1111112332222 56789999999999
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN 326 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~ 326 (515)
+|+|+|+|+||||++ ..||++|+|+|+| ++..+.+|+++||||...... ++.....+..+
T Consensus 115 ~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~~k 174 (452)
T KOG1378|consen 115 NLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEENLK 174 (452)
T ss_pred CCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcccC
Confidence 999999999999986 3499999999998 455679999999999876422 23333343357
Q ss_pred CCEEEEcCccccCCCch-hHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCC--
Q 010191 327 IDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN-- 403 (515)
Q Consensus 327 pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~-- 403 (515)
+|+|||+|||+|++++. .+||+|++++|++++.+|+|++.||||++++... |+.+|..||.||.+.
T Consensus 175 ~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~s~ 243 (452)
T KOG1378|consen 175 PDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNSSE 243 (452)
T ss_pred CcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCcCC
Confidence 99999999999999998 6999999999999999999999999999976553 557899999999643
Q ss_pred -CCceEEEEEeCCEEEEEEcCCCCc--CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCC-CccCCCCCchhh
Q 010191 404 -RAKFWYSTDYGMFRFCIADTEQDW--REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS-YAVEGSFAEPMG 479 (515)
Q Consensus 404 -~~~~~Ysfd~G~v~fi~Ldt~~~~--~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~-~~~~~~~~~~~~ 479 (515)
..++||||++|+||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |+|... +..++.. +.+
T Consensus 244 s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~~- 320 (452)
T KOG1378|consen 244 SDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ESM- 320 (452)
T ss_pred CCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hhh-
Confidence 356999999999999999999985 456899999999999999877999999999999 777542 3444433 244
Q ss_pred HHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|..||+||.+|+||+||+||+|+|||+||+||.+|
T Consensus 321 ~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 321 REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 88999999999999999999999999999999998
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-59 Score=490.89 Aligned_cols=303 Identities=27% Similarity=0.445 Sum_probs=246.9
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecC-cceEEeccccCCCCCccccccCCCeEEE
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPA-GTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~-~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+++..|.|+||++++ .++|+|+|.|... ..+.|+||++++....++. .+.+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 477899999999996 8899999999864 4689999998766554443 33456521 123 4799999
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHH
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~ 322 (515)
|+|+||+|||+|+|||+.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998853 4699999999986431 1246666654
Q ss_pred hcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC
Q 010191 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE 402 (515)
Q Consensus 323 ~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~ 402 (515)
.+||||||+|||+|++++..+||.|++.++++++.+|+|+++||||.+... ....+....|..+|.||..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 589999999999999988899999999999999999999999999986321 0112334567789999963
Q ss_pred ---CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhh
Q 010191 403 ---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (515)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (515)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+|+++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2357899999999999999999988888999999999999998888999999999999 88754432211 11223
Q ss_pred HHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|+.|++||.+|+||++|+||+|.|||++|+|+++|
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~ 345 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT 345 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc
Confidence 88999999999999999999999999999999987
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=304.15 Aligned_cols=206 Identities=41% Similarity=0.718 Sum_probs=161.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch--hHHHHHHHHHhhhhcCCCE
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~vP~ 362 (515)
.++||+++||+|... ..+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~-----------~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNT-----------NNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCC-----------CCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 459999999998752 124578888887556899999999999988765 8999999999999999999
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccC---CCCCCceEEEEEeCCEEEEEEcCCCCc---CCCHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDW---REGTEQYRF 436 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~g~~Q~~W 436 (515)
++++||||........+... + ..++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA------F----FPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc------c----cccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999975432211100 0 0011122 223467899999999999999999765 567899999
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
|+++|+++++++.||+||++|+|+ |++....... ..... .++.|++||++|+|+++|+||+|.|+|++|+|+++|
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~-~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~ 216 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEK-MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTV 216 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHH-HHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEe
Confidence 999999987667899999999999 8765432211 11122 388999999999999999999999999999999887
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=222.40 Aligned_cols=192 Identities=23% Similarity=0.375 Sum_probs=132.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch----hHHH-HHHHHHhhhhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~----~~wd-~f~~~i~~l~~~vP 361 (515)
++|+++||+|..... .+....+.+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~~-------~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGTA-------GQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCCH-------HHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 479999999975210 112233445555554 6899999999999987742 3343 34445554556899
Q ss_pred EEEccCCCCCCCCCCCC-CCCCCCCCCcccccccceeccCCCCCCceEEEEEeC------CEEEEEEcCCCCc-------
Q 010191 362 YMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYG------MFRFCIADTEQDW------- 427 (515)
Q Consensus 362 ~~~v~GNHE~~~~~~g~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 427 (515)
+|+++||||........ .|.. .++..++.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012233333 468999998 7999999998632
Q ss_pred --------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCc
Q 010191 428 --------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (515)
Q Consensus 428 --------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH 499 (515)
..+.+|++||+++|+++. .+|+||++|+|+ |+.... .. ....++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~-~~~~~~-~~-----~~~~~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPI-YSSGEH-GP-----TSCLVDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccc-eeCCCC-CC-----cHHHHHHHHHHHHHcCCCEEEeCC
Confidence 135799999999999853 389999999999 765432 11 122388999999999999999999
Q ss_pred cccccccccc
Q 010191 500 VHNYERICPI 509 (515)
Q Consensus 500 ~H~YeRt~p~ 509 (515)
+|.+++..+-
T Consensus 210 ~H~~~~~~~~ 219 (277)
T cd07378 210 DHNLQHIKDD 219 (277)
T ss_pred cccceeeecC
Confidence 9999988653
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=215.14 Aligned_cols=202 Identities=17% Similarity=0.128 Sum_probs=134.5
Q ss_pred CceEEEEEeecCCCCCCCCCccc--ccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCch----hHHHHHHHHHh
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYN--NFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 354 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~--~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~----~~wd~f~~~i~ 354 (515)
.+++|++++|+|.+...+...+. .+ ......++++++. .++||||+++|||++..... .+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 35999999999998643221110 11 1122234444333 24899999999999765432 45666777777
Q ss_pred hhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc------C
Q 010191 355 PIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW------R 428 (515)
Q Consensus 355 ~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 428 (515)
.+...+|+++++||||....... + ...+|.- ..+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~----------~----~~~~f~~---~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTE----------E----SIKDYRD---VFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCCh----------h----HHHHHHH---HhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 76668999999999998522110 0 0011110 0123478999999999999997532 2
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCC-chhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA-EPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 429 ~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~-~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
...+|++||+++|+++.+.+.+++|+++|+|+ +..... ..+..+. ....++.|.++|++++|+++|+||+|.+++.
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce
Confidence 34799999999999975445678999999999 643321 1111111 1112789999999999999999999999873
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=219.20 Aligned_cols=201 Identities=15% Similarity=0.221 Sum_probs=132.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc----hhHHHHHHHH-Hhhhh--
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQ-IEPIA-- 357 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~-i~~l~-- 357 (515)
..++|+++||+|.+.. -|....+.+.++.++ .++|||+.+||+. .+|- +.+|+.-|+. .....
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996432 123334455555554 6899999999998 4543 4567653333 33322
Q ss_pred cCCCEEEccCCCCCCCCCCCC--CCCC----CCCCC--cc--cccccceeccCCCCCCceEEEE----Ee----------
Q 010191 358 STVPYMIASGNHERDWPGTGS--FYGN----MDSGG--EC--GVLVENMFYVPTENRAKFWYST----DY---------- 413 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~~~~~g~--~y~~----~dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 413 (515)
-++|+++++||||+..+.... .|.. .+.-. +- ......|+.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999985221100 0110 00000 00 001135788873 46754 22
Q ss_pred ---CCEEEEEEcCCCC---c---CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHH
Q 010191 414 ---GMFRFCIADTEQD---W---REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484 (515)
Q Consensus 414 ---G~v~fi~Ldt~~~---~---~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (515)
..+.||++||... + .....|++||+++|+.+ ++.++|+||++|||+ |+++.. +.. ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~h-g~~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSS-KGD----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCC-CCC----HHH-HHHHH
Confidence 2289999999631 1 12468999999999754 366889999999999 998653 221 234 88999
Q ss_pred HHHHhcCCeEEEeCcccccccccc
Q 010191 485 KLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 485 ~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
|||++|+||++|+||+|.|||..+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~~ 265 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLTD 265 (394)
T ss_pred HHHHHcCcCEEEEccccceEEecC
Confidence 999999999999999999999753
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=194.93 Aligned_cols=191 Identities=21% Similarity=0.298 Sum_probs=124.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~~vP~ 362 (515)
|||++++|+|....+.... .+...+...++++++.+ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6899999999665321100 01122334445555442 469999999999954432 14455555555544 5899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC----------------
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD---------------- 426 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 426 (515)
++++||||....... .+ . + .........||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~-~~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSRE-YL-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHh-hh-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 999999998632110 00 0 0 0111234568999999999999999531
Q ss_pred ------------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHH
Q 010191 427 ------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQ 488 (515)
Q Consensus 427 ------------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~ 488 (515)
-..+.+|++||++.|++...+ ..++||++|+|+ +.... ...... . .++.+.+++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~-~~~~~--~~~~~~-~--~~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPL-HPEST--SPHGLL-W--NHEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccC-CCCCC--Cccccc-c--CHHHHHHHHH
Confidence 023479999999999986433 345899999998 65432 111111 1 1678899999
Q ss_pred hc-CCeEEEeCccccccc
Q 010191 489 KY-KVDIAVFGHVHNYER 505 (515)
Q Consensus 489 k~-~VdlvlsGH~H~YeR 505 (515)
++ +|+++|+||+|.++.
T Consensus 213 ~~~~V~~v~~GH~H~~~~ 230 (267)
T cd07396 213 AYGCVKACISGHDHEGGY 230 (267)
T ss_pred hCCCEEEEEcCCcCCCCc
Confidence 95 899999999999974
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=209.98 Aligned_cols=245 Identities=18% Similarity=0.315 Sum_probs=125.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHH
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNT 316 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~ 316 (515)
..+.+++.++||+|+|+|+||+... +....|..++|||+|... ...+||++++|.+... +....
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123447899999996543 3459999999997532 12467
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCc-----------------------hhH----HHHH--HHHHhhhhcCCCEEEccC
Q 010191 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQF--TAQIEPIASTVPYMIASG 367 (515)
Q Consensus 317 ~~~l~~~~~~pDfVl~~GDi~y~~g~-----------------------~~~----wd~f--~~~i~~l~~~vP~~~v~G 367 (515)
+.+++++ .+|||+||+||.+|+++. ... |..+ ...++.+.+++|+++++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999998741 111 2222 234567778999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc------cccccee-ccCCC------CCCceEEEEEeCC-EEEEEEcCCCCcC-----
Q 010191 368 NHERDWPGTGSFYGNMDSGGECG------VLVENMF-YVPTE------NRAKFWYSTDYGM-FRFCIADTEQDWR----- 428 (515)
Q Consensus 368 NHE~~~~~~g~~y~~~dsgge~g------~~~~~~f-~~P~~------~~~~~~Ysfd~G~-v~fi~Ldt~~~~~----- 428 (515)
+||+..+..+. ........+.. ..++..+ ++|.. .....|++|.+|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~ 281 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCD 281 (453)
T ss_dssp STTTSTT-BTT-B-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCC
T ss_pred CceecccccCC-ccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhcccccccc
Confidence 99996322110 00000000000 0001111 13321 2356799999999 9999999986321
Q ss_pred ----------------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCC---------CccCCCCCchhhHHHH
Q 010191 429 ----------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS---------YAVEGSFAEPMGRESL 483 (515)
Q Consensus 429 ----------------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~---------~~~~~~~~~~~~r~~l 483 (515)
.|.+|++||++.|++ +.++|+|+..-.|+ ...... ....+.+.. .|+.|
T Consensus 282 ~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~--er~~L 355 (453)
T PF09423_consen 282 GPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPA--ERQRL 355 (453)
T ss_dssp SSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHH--HHHHH
T ss_pred ccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHH--HHHHH
Confidence 268999999999998 56899999988887 322111 001112222 28999
Q ss_pred HHHHHhcCCe--EEEeCccccccc
Q 010191 484 QKLWQKYKVD--IAVFGHVHNYER 505 (515)
Q Consensus 484 ~~Ll~k~~Vd--lvlsGH~H~YeR 505 (515)
..+|.+.++. ++|+|.+|...-
T Consensus 356 l~~l~~~~~~~vV~LSGDvH~~~~ 379 (453)
T PF09423_consen 356 LDFLRESGIRNVVFLSGDVHASAA 379 (453)
T ss_dssp HHHHHHTT---EEEEE-SSSSEEE
T ss_pred HHHHHhhCCCCEEEEecCcchhee
Confidence 9999988875 899999998763
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.1e-21 Score=186.49 Aligned_cols=188 Identities=15% Similarity=0.217 Sum_probs=125.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998754210000 01123344444443 2489999999999965 4456677777777766 89999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc----CCCHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIEH 439 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q~~WL~~ 439 (515)
.++||||..... ..+ |..........+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAAM-RAV-----------------FPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHHH-HHh-----------------hccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 999999974110 011 1000001234578999999999999987532 235789999999
Q ss_pred HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 440 ~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||+|.+.+.
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~ 197 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDG 197 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHe
Confidence 999863 334788899998 5542211111 1111 277999999999 9999999999997643
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-20 Score=184.83 Aligned_cols=195 Identities=15% Similarity=0.192 Sum_probs=122.7
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCC--------chhHHHHHHHHHhhhhc--
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 358 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g--------~~~~wd~f~~~i~~l~~-- 358 (515)
|+.++|+|.+..... .. ....+.+...+++ .+||+|+++||+++... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~~----~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-NR----AQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-hh----hhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 00 0000222333333 57999999999996431 25678888887765433
Q ss_pred CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC----------cC
Q 010191 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WR 428 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 428 (515)
..|++.++||||....... +. +. ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998411100 00 00 011111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccc
Q 010191 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 429 ~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
...+|++||++.|++. .+.+++||++|+|+ +.... .. ....+ .+.++|++++|+++|+||+|.+++-.|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~---~~----~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIIS---PS----AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccC---CC----cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3489999999999975 34568999999998 54211 11 11213 399999999999999999999999666
Q ss_pred c
Q 010191 509 I 509 (515)
Q Consensus 509 ~ 509 (515)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 6
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=192.41 Aligned_cols=294 Identities=20% Similarity=0.291 Sum_probs=189.0
Q ss_pred eeecCCCCeEEEEEEeCCCCC-----CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 010191 174 LAQGKVWNEMTVTWTSGYGIN-----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (515)
Q Consensus 174 La~~~~~~~m~V~W~t~~~~~-----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL 248 (515)
++.|+-...-.|-|+--.... +....+||++.+.....+..++.. .+ .+..+.+++.++||
T Consensus 43 VaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~~~gL 108 (522)
T COG3540 43 VASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVDLRGL 108 (522)
T ss_pred cccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEeccCC
Confidence 444544555666786543100 334567777766543322221111 11 13468899999999
Q ss_pred CCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCC
Q 010191 249 WPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNID 328 (515)
Q Consensus 249 ~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pD 328 (515)
+|++.|+||+..+ ..-|.+..|||+|+++.. ++++.+||..+.. |+.+-..+.+.|.+ .+||
T Consensus 109 ~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~---------~~~gy~~aY~~ma~--~~~D 170 (522)
T COG3540 109 SPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQG---------WEIGYMTAYKTMAK--EEPD 170 (522)
T ss_pred CCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhccccc---------cccchhHHHHHHHh--cCCC
Confidence 9999999999875 234789999999987665 8899999986543 34455667777776 5799
Q ss_pred EEEEcCccccCCCch-----------------------------hHHHHH--HHHHhhhhcCCCEEEccCCCCCCCCCCC
Q 010191 329 IVFHIGDICYANGYI-----------------------------SQWDQF--TAQIEPIASTVPYMIASGNHERDWPGTG 377 (515)
Q Consensus 329 fVl~~GDi~y~~g~~-----------------------------~~wd~f--~~~i~~l~~~vP~~~v~GNHE~~~~~~g 377 (515)
||||.||.+|+.|-. .+|..+ -..++...+..|+++.+.+||...+-..
T Consensus 171 ~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~ 250 (522)
T COG3540 171 FVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSN 250 (522)
T ss_pred EEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccc
Confidence 999999999986521 112222 1335666779999999999998743211
Q ss_pred CCCCCCCC-CCccc------ccccce-eccCCCC-----CCceEEEEEeCC-EEEEEEcCCCCcC---------------
Q 010191 378 SFYGNMDS-GGECG------VLVENM-FYVPTEN-----RAKFWYSTDYGM-FRFCIADTEQDWR--------------- 428 (515)
Q Consensus 378 ~~y~~~ds-gge~g------~~~~~~-f~~P~~~-----~~~~~Ysfd~G~-v~fi~Ldt~~~~~--------------- 428 (515)
. -...|+ -.|.- ..++.+ -.||-.. ....|-+|.||+ ..|.+||++.+..
T Consensus 251 ~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~ 329 (522)
T COG3540 251 S-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAV 329 (522)
T ss_pred c-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhh
Confidence 0 000011 11110 011111 1355321 257899999999 6899999986431
Q ss_pred -------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcC---CCC----CC-CccCCCCCchhhHHHHHHHHHhcCCe
Q 010191 429 -------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGY---SSD----LS-YAVEGSFAEPMGRESLQKLWQKYKVD 493 (515)
Q Consensus 429 -------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~y---ss~----~~-~~~~~~~~~~~~r~~l~~Ll~k~~Vd 493 (515)
.|.+|.+||++.|.+ +++.|.|+..-.||.- ... .. ...++.-.-+.+|+.|...+.+.++.
T Consensus 330 ~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~ 406 (522)
T COG3540 330 AGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIR 406 (522)
T ss_pred hCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCC
Confidence 268999999999998 7899999988888721 000 00 00011111234599999999998876
Q ss_pred --EEEeCccccc
Q 010191 494 --IAVFGHVHNY 503 (515)
Q Consensus 494 --lvlsGH~H~Y 503 (515)
++|.|.+|..
T Consensus 407 N~V~LtgDvH~~ 418 (522)
T COG3540 407 NTVVLTGDVHYS 418 (522)
T ss_pred CcEEEechhHHH
Confidence 9999999964
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.9e-20 Score=176.56 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=113.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh-cCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
|||++++|+|..... ........++++++.. .++|+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999976431 0111123445555542 579999999999965554678999999998886 679999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCC-CCCchhhHHHHHHHHHhc-CCeEEEeCcccccccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICP 508 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~p 508 (515)
.. ..++|+++|+|+ +....+..... ......+++.|++|+++| +|+++|+||+|.+.+..-
T Consensus 104 ~~---~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 104 HP---DRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CC---CCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 42 334899999998 65443221110 000112366899999998 799999999999997754
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=175.17 Aligned_cols=195 Identities=14% Similarity=0.174 Sum_probs=119.5
Q ss_pred EEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHH
Q 010191 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFT 350 (515)
Q Consensus 275 F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~ 350 (515)
.++.++. ...+||+.++|+|....... ... .....+.++++++. ..+|||||+.||++. ++...+++.+.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~-~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHE-TLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFA 78 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCC-cee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 4555543 24599999999997432111 110 01123344444433 247999999999995 45556777777
Q ss_pred HHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc---
Q 010191 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW--- 427 (515)
Q Consensus 351 ~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~--- 427 (515)
+.++.+ .+|+++++||||..... ..+ + +.......++.+..++++||+|||....
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~~~~-~~~-----------------~--~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQPAM-YSA-----------------L--QDAGISPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCChHHH-HHH-----------------H--hhcCCCccceEEecCCEEEEEecCCCCCCcC
Confidence 777766 68999999999984110 000 0 0000011223344456899999997532
Q ss_pred -CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccc
Q 010191 428 -REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYE 504 (515)
Q Consensus 428 -~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 504 (515)
..+.+|++||+++|++.. +.+-+|++.|+|+ .....|... ... . ..+.|.+++++| +|+++|+||+|...
T Consensus 137 G~l~~~ql~wL~~~L~~~~--~~~~vv~~hH~P~-~~~~~~~d~-~~l-~--n~~~l~~ll~~~~~v~~vl~GH~H~~~ 208 (275)
T PRK11148 137 GELSEYQLEWLERKLADAP--ERHTLVLLHHHPL-PAGCAWLDQ-HSL-R--NAHELAEVLAKFPNVKAILCGHIHQEL 208 (275)
T ss_pred CEeCHHHHHHHHHHHhhCC--CCCeEEEEcCCCC-CCCcchhhc-cCC-C--CHHHHHHHHhcCCCceEEEecccChHH
Confidence 235899999999999863 3342444444565 322222111 111 1 167899999998 89999999999865
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=174.05 Aligned_cols=191 Identities=22% Similarity=0.367 Sum_probs=120.5
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHH-HHHHHHhhhhc---
Q 010191 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 358 (515)
Q Consensus 283 ~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~--- 358 (515)
++..++|+++||+|.... |+ |......+..|.++ -++|||+.+||.+|++|...+.| .|.+..+.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999994431 21 11122334445443 58999999999999998766555 44445555432
Q ss_pred -CCCEEEccCCCCCCCCCCC---CCCCCCCCCCcccccccceeccCCCCCCceEE--E----EEeCCEEEEEEcCCC---
Q 010191 359 -TVPYMIASGNHERDWPGTG---SFYGNMDSGGECGVLVENMFYVPTENRAKFWY--S----TDYGMFRFCIADTEQ--- 425 (515)
Q Consensus 359 -~vP~~~v~GNHE~~~~~~g---~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y--s----fd~G~v~fi~Ldt~~--- 425 (515)
+.|+|.+.||||+..+-.. ..|... ..|+..|.. || + +-.-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~~----------d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRKI----------DKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHhh----------ccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 6799999999999732110 011111 123333321 00 0 001112233333221
Q ss_pred ----CcCC-------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeE
Q 010191 426 ----DWRE-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (515)
Q Consensus 426 ----~~~~-------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdl 494 (515)
+++. -..|+.||+..|++ +.++|+||++|+|+ -+.+ .|+.- .+ .+++|.|||++++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~-~HG~T----~e-L~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAG-HHGPT----KE-LEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhh-ccCCh----HH-HHHHHHHHHHhcCCcE
Confidence 1211 25788999999999 68899999999998 6553 34421 23 3899999999999999
Q ss_pred EEeCcccccccc
Q 010191 495 AVFGHVHNYERI 506 (515)
Q Consensus 495 vlsGH~H~YeRt 506 (515)
.++||+|..|..
T Consensus 247 Y~nGHDHcLQhi 258 (336)
T KOG2679|consen 247 YINGHDHCLQHI 258 (336)
T ss_pred EEecchhhhhhc
Confidence 999999998854
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=161.74 Aligned_cols=180 Identities=15% Similarity=0.173 Sum_probs=115.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCchh--------HHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSG 386 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~--------~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsg 386 (515)
.+++.+.+...+|||||++||++....... .+..+++.++.....+|+++++||||......... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 345555544468999999999997653211 24556777777778999999999999863221100 0000
Q ss_pred Cccccccccee--ccCCCC----CCceEEEEE-eCCEEEEEEcCCCCc-----------CCCHHHHHHHHHHHhcccCCC
Q 010191 387 GECGVLVENMF--YVPTEN----RAKFWYSTD-YGMFRFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQK 448 (515)
Q Consensus 387 ge~g~~~~~~f--~~P~~~----~~~~~Ysfd-~G~v~fi~Ldt~~~~-----------~~g~~Q~~WL~~~La~~~r~~ 448 (515)
......+...| .+|.+. ..+-||+++ .++++||+|||.... ....+|++||+++|+++.+++
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 00000000111 122111 245688888 889999999997532 124789999999999975333
Q ss_pred CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCcccccccc
Q 010191 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERI 506 (515)
Q Consensus 449 ~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~YeRt 506 (515)
..++|++|+|+ +..... . . ...++.|.+|+++|+ |.++|+||+|..+-.
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 34788899998 433210 0 0 123789999999997 789999999997743
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-17 Score=149.90 Aligned_cols=194 Identities=19% Similarity=0.209 Sum_probs=101.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHH-HHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~-~~i~~l~~~vP~~~v 365 (515)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 689999999986421 000 1122333333 378999999999998766554443322 233445678999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCccccccccee-ccCCC----CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHH
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMF-YVPTE----NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f-~~P~~----~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~ 440 (515)
+||||........ ......... ..... ..... .........+..............+..|+...
T Consensus 72 ~GNHD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (200)
T PF00149_consen 72 LGNHDYYSGNSFY----------GFYDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWL 140 (200)
T ss_dssp E-TTSSHHHHHHH----------HHHHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHH
T ss_pred ccccccceecccc----------ccccccccccccccccccccCcce-eeecccccccccccccccccccccchhccccc
Confidence 9999985211000 000000000 00000 00000 12222222222222222111222222333222
Q ss_pred HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 441 La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
+....+...+++|+++|+|+ ++........ ......++.+..++.+++|+++|+||+|.|
T Consensus 141 ~~~~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 141 LLLLEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22222245678999999998 6654321111 001223789999999999999999999987
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-16 Score=148.80 Aligned_cols=167 Identities=15% Similarity=0.169 Sum_probs=102.4
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchh-HHHHHHHHHhhhh-cCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 363 (515)
.+||++++|+|.+................+.+.+++++ .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100000111223445555554 68999999999998655432 3444444455544 379999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
+++||||.. -....+|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCEEEEEeccCCcCCCCC-CC------cc--CCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccc
Q 010191 444 VD--RQKQPWLIFLAHRVLGYSSDL-SY------AV--EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 444 ~~--r~~~pwiIv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
.. +....+.++++|+|+ ..... |. +. +.........+.+..+....+|+++|+||+|.++..+.
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~ 181 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGR 181 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecc
Confidence 63 223456899999997 43211 11 10 10000011123344455668999999999999876543
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.4e-16 Score=153.74 Aligned_cols=162 Identities=19% Similarity=0.175 Sum_probs=102.6
Q ss_pred CCCCEEEEcCccccCCC--chhHHHHHHHHHhhh----hcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceec
Q 010191 325 KNIDIVFHIGDICYANG--YISQWDQFTAQIEPI----ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY 398 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l----~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~ 398 (515)
.+||+|+++||+++.+. ...+|.+..+.+..+ ...+|++.++||||+.+... ... .....|...|.
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~-~~~-------~~~~rf~~~Fg 115 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNG-VVL-------PVRQRFEKYFG 115 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCC-CCH-------HHHHHHHHHhC
Confidence 57999999999996432 134554433333333 23589999999999863211 000 00011222231
Q ss_pred cCCCCCCceEEEEEeCCEEEEEEcCCCCc-----CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCC
Q 010191 399 VPTENRAKFWYSTDYGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS 473 (515)
Q Consensus 399 ~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~ 473 (515)
...|+|++|+++||+||+.... ....+|.+||++.|+... ...| +|+++|+|+ |.... ..++.
T Consensus 116 -------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~--~~cg~ 183 (257)
T cd08163 116 -------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPN--TSCGP 183 (257)
T ss_pred -------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCC--CCCCC
Confidence 2247899999999999997421 234689999999998753 3345 899999999 65422 11111
Q ss_pred CC--------------c-hhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 474 FA--------------E-PMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 474 ~~--------------~-~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.. + -+-.+.-..||++.+..+||+||+|-|=..
T Consensus 184 ~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 184 LRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 00 0 111345568888899999999999998543
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.1e-15 Score=145.32 Aligned_cols=186 Identities=19% Similarity=0.256 Sum_probs=111.1
Q ss_pred EEEEeecCCCCC--CCCCcccccccCcHHHHHHHHH---h-cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 289 VIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 289 f~v~gD~g~~~~--~g~~~y~~~~~~~~~~~~~l~~---~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
+.+++|+|.... ++.+.+ .....+.++++.+ . .++||+|+++||+++. +........++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~---g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVF---GPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCccc---CccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 368899998742 111222 2323344444433 2 3489999999999943 3223333334444433 3589
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCC-CceEEEEEeCCEEEEEEcCCC----Cc----------
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQ----DW---------- 427 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~----~~---------- 427 (515)
++++||||+...... .+... ++.... -..-.++.++++.|+.++... .+
T Consensus 75 ~~V~GNHD~~~~~~~--------------~~~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSAS--------------KLRKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHH--------------HHHHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 999999997311000 00000 000000 000134567889999876311 11
Q ss_pred ---CCCHHHHHHHHHHHhcccCCC-CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 428 ---REGTEQYRFIEHCLASVDRQK-QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 428 ---~~g~~Q~~WL~~~La~~~r~~-~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
....+|++||++.|+++.... ..++|+++|+|+ +.... ..+.+..++.+++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 012568999999999864222 246899999998 54321 1346788999999999999999999
Q ss_pred cccccc
Q 010191 504 ERICPI 509 (515)
Q Consensus 504 eRt~p~ 509 (515)
++..|+
T Consensus 206 ~~~~~~ 211 (232)
T cd07393 206 GRDRAI 211 (232)
T ss_pred cccccc
Confidence 998877
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-14 Score=147.85 Aligned_cols=96 Identities=21% Similarity=0.217 Sum_probs=71.3
Q ss_pred CceEEEEE-eCCEEEEEEcCCCCc-----CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCcc-C--CCCC
Q 010191 405 AKFWYSTD-YGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV-E--GSFA 475 (515)
Q Consensus 405 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~-~--~~~~ 475 (515)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||+ ++......+ . +...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 999999999997531 23589999999999973 3456999999998 654321110 0 0001
Q ss_pred chhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 476 EPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 476 ~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
. ..++|.++|.+| +|.++|+||+|....+
T Consensus 366 ~--n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 366 H--LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred c--CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 1 156899999998 8999999999988754
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-13 Score=128.30 Aligned_cols=169 Identities=15% Similarity=0.155 Sum_probs=101.4
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCC
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 368 (515)
++++||+|.+.. .... ..++ ..++|+|+++||+++.. .......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999986421 1111 2222 36899999999999643 33333322 33433 27899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC------cCCCHHHHHHHHHHHh
Q 010191 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------WREGTEQYRFIEHCLA 442 (515)
Q Consensus 369 HE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~g~~Q~~WL~~~La 442 (515)
||...... .. . + ..+.+ .+ ..+.++++.|+.+++... .....+|++|+ +.|+
T Consensus 62 HD~~~~~~--~~---~-------~--~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEILG--LL---T-------S--AGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHHHH--hh---h-------c--CcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 99741100 00 0 0 00111 11 235678899999987431 12346889998 4444
Q ss_pred cccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 443 ~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
. .....+|+++|+|+ +.. +....... ...+.+.+..++++++++++|+||+|.-..
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~--~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~~ 175 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGT--AVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESRG 175 (188)
T ss_pred c---cCCCCeEEEECCCC-cCC--cccccCCC-CccCCHHHHHHHHHhCCcEEEEeccccccc
Confidence 3 23344899999998 653 11111000 012467899999999999999999998643
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-13 Score=132.69 Aligned_cols=185 Identities=19% Similarity=0.231 Sum_probs=103.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
||++++|+|.... .+ ...+.++++++. ..++|+|+++||++... .+...+++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 111223333332 15799999999999532 2223444444442 46899999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC-------------------
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------------------- 426 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 426 (515)
+||||+..... +. + ....+. + ..-.+.++.+..++++|++++...+
T Consensus 68 ~GNHD~~~~~~---~~------~----~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLT---YE------E----IESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCC---HH------H----HHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999742110 00 0 000000 0 0001112233345667777663111
Q ss_pred -------cC-----CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCC----CCccCCCCCchhhHHHHHHHHHhc
Q 010191 427 -------WR-----EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL----SYAVEGSFAEPMGRESLQKLWQKY 490 (515)
Q Consensus 427 -------~~-----~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~----~~~~~~~~~~~~~r~~l~~Ll~k~ 490 (515)
.. ...+|++||++.|++.. ..+ +|++.|+|+ ..... ............+.+.|..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 00 12678999999998753 234 888889987 32110 000000000112357899999999
Q ss_pred CCeEEEeCcccccc
Q 010191 491 KVDIAVFGHVHNYE 504 (515)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (515)
+|+++|+||+|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999875
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=131.27 Aligned_cols=184 Identities=17% Similarity=0.231 Sum_probs=116.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+||+.++|.|..... ......+.++++.+ .+||+|+++||+++. +...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999997310 11234455554443 578999999999965 666677777777775555789999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEe-CCEEEEEEcCCCCc----CCCHHHHHHHHH
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQDW----REGTEQYRFIEH 439 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~g~~Q~~WL~~ 439 (515)
++||||....+... +...+... ...+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEA--------------FSDQFFNR----YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHH--------------hhhhhccc----CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 99999986432211 01011000 011111122 67899999998642 346899999999
Q ss_pred HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCccccc
Q 010191 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNY 503 (515)
Q Consensus 440 ~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Y 503 (515)
.|++........+|+++|+|+ .....+..... . .....+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~~---l-~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRVA---L-RDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCccceee---e-ecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999864321124677777776 43322211110 1 11457778888888 999999999987
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=135.55 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=66.7
Q ss_pred CceEEEEE-eCCE--EEEEEcCCCCc-----------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCC----
Q 010191 405 AKFWYSTD-YGMF--RFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL---- 466 (515)
Q Consensus 405 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~---- 466 (515)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.|++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5844 99999987521 134899999999999874 25688899988887 54221
Q ss_pred -CCc-c-C--CCCCchhhHHHHHHHHHhc-CCeEEEeCcccccc
Q 010191 467 -SYA-V-E--GSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYE 504 (515)
Q Consensus 467 -~~~-~-~--~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 504 (515)
|.. . . ....+...-.+|..+|.+| +|.++|+||.|...
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 110 0 0 0011111124899999998 79999999999543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.4e-12 Score=116.46 Aligned_cols=124 Identities=19% Similarity=0.283 Sum_probs=83.8
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcC-CCEEEc
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~-vP~~~v 365 (515)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0011112223222 2579999999999964 4456777777777776554 699999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhccc
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~ 445 (515)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 446 r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
|+++|+|+ +..... ...... .++.+.+++.+++++++++||+|....
T Consensus 81 -------iv~~Hhp~-~~~~~~--~~~~~~---~~~~~~~~l~~~~~~~~l~GH~H~~~~ 127 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS--GRERLL---DAGDALKLLAEAGVDLVLHGHKHVPYV 127 (144)
T ss_pred -------EEEecCCC-CCCCcc--ccccCC---CHHHHHHHHHHcCCCEEEECCCCCcCe
Confidence 88889998 543221 111111 267899999999999999999999763
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.7e-11 Score=117.96 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=102.7
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......+...+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 3689999999853 23455555432 57999999999996442333344445544433 58999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC-CCCceEEEEEe-CCEEEEEEcCCCCc--CCCHHHH----H
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE-NRAKFWYSTDY-GMFRFCIADTEQDW--REGTEQY----R 435 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~g~~Q~----~ 435 (515)
+++||||..... +.. ..+...-.+|.. .-... ...+ |++.|+.++..... ...++|. +
T Consensus 67 ~V~GNhD~~v~~---~l~---------~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLWE---YLR---------EAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHHH---HHH---------HHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 999999963000 000 000000001110 00111 2344 56999999866532 2344542 5
Q ss_pred HHHH-HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccc
Q 010191 436 FIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (515)
Q Consensus 436 WL~~-~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 501 (515)
||.+ .|+...+...+..|+++|.|+ |..+.. ..+.+.+..++++++..+++|||+|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~~---------h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPP-YHKGLN---------EQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCC-CCCCCC---------ccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221122335899999999 766311 1347799999999999999999988
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.1e-12 Score=121.23 Aligned_cols=197 Identities=11% Similarity=0.117 Sum_probs=109.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHHHhhhh-cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
||++++|+|.+.......-........++++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999986421110000001123445555443 257999999999997543 2344566666776665 489999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceecc--CCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV--PTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~L 441 (515)
+++||||...... ... .. ......... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~-~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLG-ALS-PL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCccccc-ccc-ch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 9999999863221 000 00 000000000 0001122233445566888888865322 1233445555555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
... ....+.|++.|.|+ ...... .. .. .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 554 34456899999997 432211 00 00 12334455678899999999998763
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-12 Score=118.55 Aligned_cols=150 Identities=17% Similarity=0.215 Sum_probs=86.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCC
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 368 (515)
|++++|+|.+.... ...+.+... ..++|+|+++||+++... ..++.. .........|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~~-~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFPI-APDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccCC-CCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 47899999764310 001111111 368999999999996432 222222 23334457899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCC
Q 010191 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQK 448 (515)
Q Consensus 369 HE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~ 448 (515)
||+.. +|. + ...||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~--G---~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII--G---TTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE--e---eecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 0 1123333221 1245555555544
Q ss_pred CCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 449 ~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
.+ +|+++|+|+ +.................++.+..++++++|+++++||+|...
T Consensus 97 ~~-~vv~~HhpP-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 GK-TVVVTHHAP-SPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CC-EEEEeCCCC-CccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23 899999998 6543211111111111235668888889999999999999874
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.4e-12 Score=122.44 Aligned_cols=170 Identities=18% Similarity=0.162 Sum_probs=98.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+||++++|+|.+... ....++++++. ..+||+|+++||+++...... +.+.+.++.+...+|+++
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986431 11223333332 257999999999997544322 345566666667899999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcc
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~ 444 (515)
++||||+......... + ......+.+- .+.+..++.++..+.+.--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000001111 1223445556544433321111 12234566777664
Q ss_pred cCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccccc
Q 010191 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIY 510 (515)
Q Consensus 445 ~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~ 510 (515)
+ +..+.|++.|.|. + .+. +.+.++|++++||+|..+...|..
T Consensus 132 ~--~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~ 173 (223)
T cd07385 132 D--EDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGI 173 (223)
T ss_pred C--CCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEecccc
Confidence 3 3456899999985 1 111 156789999999999999766654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.4e-10 Score=112.33 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=52.8
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
..+|+++++|+|.+... ....++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~-----------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV-----------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC-----------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 11233333332 25899999999999622 223345666777777777899
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
++++||||+.
T Consensus 116 ~~V~GNHD~~ 125 (271)
T PRK11340 116 FACFGNHDRP 125 (271)
T ss_pred EEecCCCCcc
Confidence 9999999974
|
|
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.4e-09 Score=107.26 Aligned_cols=88 Identities=14% Similarity=0.262 Sum_probs=59.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccc--------cCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQ--------RGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~--------~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
++.||++.++|+|.+...++.-.+..+ ....+.++++++ .++||||+++||+++.......-..+++.+.|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997642221111111 112345667776 48999999999999874433222345666776
Q ss_pred h-hcCCCEEEccCCCCCC
Q 010191 356 I-ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 l-~~~vP~~~v~GNHE~~ 372 (515)
. ..+||+.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 4 4699999999999965
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=97.52 Aligned_cols=96 Identities=29% Similarity=0.394 Sum_probs=70.1
Q ss_pred cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCC
Q 010191 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN 403 (515)
Q Consensus 324 ~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (515)
..++|+|+++||+++.... ..+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 4789999999999975443 334433333344456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHH
Q 010191 404 RAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483 (515)
Q Consensus 404 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (515)
|++.|.|+ +....... .. ....++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~---~~~~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD---EDPGSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc---chhhHHHH
Confidence 89999998 54432111 11 11126788
Q ss_pred HHHHHhcCCeEEEeCccccccccc
Q 010191 484 QKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 484 ~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
..++.+++++++|+||.|.+.++.
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.3e-09 Score=95.78 Aligned_cols=60 Identities=18% Similarity=0.407 Sum_probs=39.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.||+++||+|.+. ..++++++...++|+|+++||++.. .++.+.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999998753 2345555555679999999999851 4555555554 999999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 55 GNHD~~ 60 (156)
T PF12850_consen 55 GNHDNW 60 (156)
T ss_dssp -CCHST
T ss_pred CCcccc
Confidence 999963
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-08 Score=91.90 Aligned_cols=117 Identities=20% Similarity=0.337 Sum_probs=75.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
||+++||+|.... .+ ...++|+|+++||+++. +...+++.+.+.++.+. ..++++++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999985420 11 23689999999999953 44444555555555442 123578999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCC
Q 010191 368 NHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQ 447 (515)
Q Consensus 368 NHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~ 447 (515)
|||... . . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--~ 67 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--E 67 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C--C
Confidence 999630 0 1 1
Q ss_pred CCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 448 KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 448 ~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
. +.|++.|.|+ +..... ... ....+.+.+..++++++++++++||+|...
T Consensus 68 -~-~~ilv~H~~p-~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 68 -D-TDILVTHGPP-YGHLDL-VSS---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -C-CEEEEECCCC-CcCccc-ccc---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 2 3688889998 764321 110 011224577888899999999999999985
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.6e-09 Score=104.35 Aligned_cols=85 Identities=11% Similarity=0.121 Sum_probs=59.2
Q ss_pred cCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 277 ASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 277 T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
++..+.....++++.++|+|.... .....+.+.++.+ +.+|+|+.+||+++. .....+....+.++++
T Consensus 35 ~~~~~~~~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L 102 (284)
T COG1408 35 TPKLPASLQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKL 102 (284)
T ss_pred cCCCCcccCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhh
Confidence 333333344589999999998642 1122334444444 567999999999964 2234456677788888
Q ss_pred hcCCCEEEccCCCCCCC
Q 010191 357 ASTVPYMIASGNHERDW 373 (515)
Q Consensus 357 ~~~vP~~~v~GNHE~~~ 373 (515)
.+..+++++.||||+..
T Consensus 103 ~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 103 KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred hccCCEEEEeccccccc
Confidence 89999999999999863
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.7e-08 Score=99.75 Aligned_cols=181 Identities=17% Similarity=0.223 Sum_probs=95.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCC-C---chhHHHHHHHHHhhhhcC-CC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-G---YISQWDQFTAQIEPIAST-VP 361 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~-g---~~~~wd~f~~~i~~l~~~-vP 361 (515)
|+++++|+|.+... +...+.+.+.++. ..++|+|+++||+++.- + .....+...+.++.+... +|
T Consensus 2 ~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~ 72 (241)
T PRK05340 2 PTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVP 72 (241)
T ss_pred cEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCe
Confidence 78999999986431 1112223332222 35799999999999631 1 112234455666666554 89
Q ss_pred EEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHH
Q 010191 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (515)
Q Consensus 362 ~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~L 441 (515)
++.+.||||..... .+. .++|+. .+|. ...++.++.++++.-.... ...+..++++++.+
T Consensus 73 v~~v~GNHD~~~~~--~~~------~~~g~~-----~l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~ 132 (241)
T PRK05340 73 CYFMHGNRDFLLGK--RFA------KAAGMT-----LLPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKV 132 (241)
T ss_pred EEEEeCCCchhhhH--HHH------HhCCCE-----EeCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHHH
Confidence 99999999974210 000 011110 0111 1345667766666654322 12335555555555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCC------------CCc-cCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDL------------SYA-VEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~------------~~~-~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
++. |...+.|.++ +.... ... ....+.+. ..+.+..++.+++++++++||+|.-..
T Consensus 133 r~~------~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 133 RNP------WLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred hCH------HHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 431 2233333333 21100 000 00001111 145788899999999999999998653
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-08 Score=96.05 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=35.4
Q ss_pred CCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhh---cCCCEEEccCCCCCC
Q 010191 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~---~~vP~~~v~GNHE~~ 372 (515)
.+||+|+++||+++.+.. ..+|.+.++.+.++. ..+|++.++||||.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 479999999999976543 334555554554443 369999999999986
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=93.17 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
+|++++||+|.... . ... +.++. .+||+|+++||++... .++.+.++.+ ..|++++.
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1233334333 47999999
Q ss_pred CCCCCCC
Q 010191 367 GNHERDW 373 (515)
Q Consensus 367 GNHE~~~ 373 (515)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.2e-08 Score=93.61 Aligned_cols=179 Identities=18% Similarity=0.256 Sum_probs=89.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHH-------------------
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd------------------- 347 (515)
=++++++|.+-. ...++.+..++.+ ..+|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~------------~e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGD------------FELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-------------HHHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchH------------HHHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 378999998532 1123444444554 58999999999997766666776
Q ss_pred -------HHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEE
Q 010191 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (515)
Q Consensus 348 -------~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 420 (515)
.|++.+..+ .+|.+++|||||.... .|+. .++......|.--.-..-+.+--|.+.++.
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~~---~~lr---------~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G 138 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPER---FFLR---------EAYNAEIVTPHIHNVHESFFFWKGEYLVAG 138 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SHH---HHHH---------HHHHCCCC-TTEEE-CTCEEEETTTEEEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchHH---HHHH---------HHhccceeccceeeeeeeecccCCcEEEEe
Confidence 666666644 8999999999996310 0000 011100001110000000223334466776
Q ss_pred EcCCCC---cCC------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC
Q 010191 421 ADTEQD---WRE------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491 (515)
Q Consensus 421 Ldt~~~---~~~------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~ 491 (515)
+-.+-. ... -....+|..+.|..+ ++. -+|++.|.|+-+..+. ...+.+.+..++.+|+
T Consensus 139 ~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el--k~~-r~IlLfhtpPd~~kg~---------~h~GS~~V~dlIk~~~ 206 (255)
T PF14582_consen 139 MGGEITDDQREEEFKLRYPAWEAEYSLKFLREL--KDY-RKILLFHTPPDLHKGL---------IHVGSAAVRDLIKTYN 206 (255)
T ss_dssp E-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC--TSS-EEEEEESS-BTBCTCT---------BTTSBHHHHHHHHHH-
T ss_pred cCccccCCCccccccccchHHHHHHHHHHHHhc--ccc-cEEEEEecCCccCCCc---------ccccHHHHHHHHHhcC
Confidence 654421 000 122445556666665 233 4788899987111110 1224668999999999
Q ss_pred CeEEEeCcccccc
Q 010191 492 VDIAVFGHVHNYE 504 (515)
Q Consensus 492 VdlvlsGH~H~Ye 504 (515)
.++||+||+|--.
T Consensus 207 P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 207 PDIVLCGHIHESH 219 (255)
T ss_dssp -SEEEE-SSS-EE
T ss_pred CcEEEecccccch
Confidence 9999999999754
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.3e-08 Score=88.81 Aligned_cols=184 Identities=16% Similarity=0.212 Sum_probs=94.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
++.+++|+|...... .+...|.++...--++|.++ ...-|.|++.|||+.+..-+.. ..=++.+..+-. --+
T Consensus 2 ~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LPG--~K~ 77 (230)
T COG1768 2 RIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-EEDLRFIGDLPG--TKY 77 (230)
T ss_pred ceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhh-hhhhhhhhcCCC--cEE
Confidence 466777777654321 23333444333222333332 3446899999999988654321 112333433311 247
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEc---CC-CCcCCCHHHH-----
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD---TE-QDWREGTEQY----- 434 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld---t~-~~~~~g~~Q~----- 434 (515)
++.||||+.|+.....-+.. | ...|.+ + -.|.++++.++..- +. .++.+-++|-
T Consensus 78 m~rGNHDYWw~s~skl~n~l--------p-~~l~~~--n------~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~ 140 (230)
T COG1768 78 MIRGNHDYWWSSISKLNNAL--------P-PILFYL--N------NGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFL 140 (230)
T ss_pred EEecCCccccchHHHHHhhc--------C-chHhhh--c------cceeEeeEEEEEeecccCCCCCcCccchhHHHHHH
Confidence 89999999875221000000 0 000111 0 12455554444321 11 2232233332
Q ss_pred ---HHHHH-HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 435 ---RFIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 435 ---~WL~~-~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.-|+. ..+++. +...-.||+.|.|+ ++... . ...+..++++++|+.++.||.|--.|-
T Consensus 141 RE~~RLrlsa~a~l~-k~~~~fivM~HYPP-~s~~~---t---------~~~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 141 REIGRLRLSADAALP-KGVSKFIVMTHYPP-FSDDG---T---------PGPFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHHHHHHHHHhcc-cCcCeEEEEEecCC-CCCCC---C---------CcchHHHHhhcceeeEEeeeccCCCCC
Confidence 22333 222332 33344899999998 66531 1 225667788999999999999988764
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=87.58 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=39.2
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCC--chhHHHHHHHHHhhhhc---CCCEEEccCCCCCC
Q 010191 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 372 (515)
Q Consensus 316 ~~~~l~~~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l~~---~vP~~~v~GNHE~~ 372 (515)
.++++++. .+||+|+++||+++... ...+|..+...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34445544 58999999999996532 23456665555555433 58999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=1e-07 Score=85.02 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=34.6
Q ss_pred EEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccc
Q 010191 452 LIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 452 iIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
.|++.|+|+ +.... ... . ...+.+.+..++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 578888887 54321 111 1 11236788889999999999999999876654
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.5e-08 Score=90.61 Aligned_cols=57 Identities=19% Similarity=0.460 Sum_probs=40.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhc-------CCCEEEccCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS-------TVPYMIASGNHERD 372 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~-------~vP~~~v~GNHE~~ 372 (515)
+++.++++. .+||+|+++||+++.... ..+|.+..+.++.+.. .+|++.++||||..
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999965432 2456666655555432 68999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.8e-07 Score=97.87 Aligned_cols=176 Identities=17% Similarity=0.234 Sum_probs=101.4
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc----h---hHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCC
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGG 387 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~---~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgg 387 (515)
.+++.|.+..+++|+|++.||++-.+.. + .......+.+......+|+++++||||.-..+. |-.+.-+ .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~--F~~~~~~-~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL--FAPGSVP-K 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh--cCCCCCc-c
Confidence 3455555555569999999999954421 1 112234455666677999999999999854321 1000000 0
Q ss_pred ccccc--ccce-----eccCCCC-----CCceEEEEEeCCEEEEEEcCCCCcC----------CCHHHHHHHHHHHhccc
Q 010191 388 ECGVL--VENM-----FYVPTEN-----RAKFWYSTDYGMFRFCIADTEQDWR----------EGTEQYRFIEHCLASVD 445 (515)
Q Consensus 388 e~g~~--~~~~-----f~~P~~~-----~~~~~Ysfd~G~v~fi~Ldt~~~~~----------~g~~Q~~WL~~~La~~~ 445 (515)
..... |... -.+|.+. .+.+|-..-+++.++|+||+..-+. .-.+|++|+..+|.++.
T Consensus 276 ~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae 355 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE 355 (577)
T ss_pred hhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH
Confidence 00000 0000 0123221 2333434456889999999975321 23688999999999876
Q ss_pred CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcC--CeEEEeCcccccc
Q 010191 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYE 504 (515)
Q Consensus 446 r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~--VdlvlsGH~H~Ye 504 (515)
.+... +=+++|.|++- . ...+ +....+-.++.++. +.-.|.||.|.-+
T Consensus 356 ~~Gek-Vhil~HIPpG~-~--------~c~~-~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 356 SAGEK-VHILGHIPPGD-G--------VCLE-GWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred hcCCE-EEEEEeeCCCC-c--------chhh-hhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 44444 77889999821 1 1111 11345555666652 5567999999866
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-07 Score=92.04 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=60.4
Q ss_pred CCCCEEEEcCccccCCCc---------------------hhHH----HHH--HHHHhhhhcCCCEEEccCCCCCCCCCCC
Q 010191 325 KNIDIVFHIGDICYANGY---------------------ISQW----DQF--TAQIEPIASTVPYMIASGNHERDWPGTG 377 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~---------------------~~~w----d~f--~~~i~~l~~~vP~~~v~GNHE~~~~~~g 377 (515)
.++|++||+||.+|++.. ...+ ..+ ...++.+.+++|++.++.+||+..+..+
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999998742 1111 111 1235667789999999999999744322
Q ss_pred CCCCCCCCCCc--cc----ccccceeccCCC-----CCCceEEEEEeCCE-EEEEEcCCCCc
Q 010191 378 SFYGNMDSGGE--CG----VLVENMFYVPTE-----NRAKFWYSTDYGMF-RFCIADTEQDW 427 (515)
Q Consensus 378 ~~y~~~dsgge--~g----~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~ 427 (515)
..-....+... .. ..|......+.. .....|++|.+|.. .|++||++...
T Consensus 108 ~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R 169 (228)
T cd07389 108 DGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR 169 (228)
T ss_pred ccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc
Confidence 10000000000 00 011111111111 23568999999996 99999998754
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.4e-06 Score=83.55 Aligned_cols=177 Identities=19% Similarity=0.300 Sum_probs=99.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhh-cCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIA-STVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~-~~vP~~ 363 (515)
.+|++++.|+|.... +...+..++++ .++|+++.+|||+|.. +...+-.+-. .++.+. ..+|++
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~~~~~~~-~~e~l~~~~~~v~ 68 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKEVAEELN-KLEALKELGIPVL 68 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchHHHHhhh-HHHHHHhcCCeEE
Confidence 379999999986431 22333333333 4899999999999432 1111111110 044444 489999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC------CcCCCH-HHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ------DWREGT-EQYRF 436 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~------~~~~g~-~Q~~W 436 (515)
+++||-|-..-.. ... . .++.. .+ -+.+.|++.|+.+-... .+...+ +-+.-
T Consensus 69 avpGNcD~~~v~~-~l~----~---~~~~v-----------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~ 127 (226)
T COG2129 69 AVPGNCDPPEVID-VLK----N---AGVNV-----------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSK 127 (226)
T ss_pred EEcCCCChHHHHH-HHH----h---ccccc-----------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHH
Confidence 9999987531000 000 0 00000 00 34667777777632111 111222 33344
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
|++-+.+.+ .+-.|++.|.|+ |..... . ... ....|.+.+..++++.++.+.++||.|-+.
T Consensus 128 l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~-~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 128 LKSLVKKAD---NPVNILLTHAPP-YGTLLD-T-PSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHhccc---CcceEEEecCCC-CCcccc-C-CCC-ccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 555555542 121399999999 876432 1 111 134567899999999999999999999754
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.1e-07 Score=82.63 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|+++++|+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 37999999995421 23344455554348999999999981 1233333333 45899999
Q ss_pred CCCCC
Q 010191 367 GNHER 371 (515)
Q Consensus 367 GNHE~ 371 (515)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.2e-07 Score=83.94 Aligned_cols=59 Identities=17% Similarity=0.413 Sum_probs=42.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
|++++||+|.. ...++++++...++|.|+++||+++...... +....|++.+.|
T Consensus 1 ~i~~isD~H~~---------------~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGS---------------LELLEKALELFGDVDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhcCCCEEEECCccccccccch-----------hhcCCcEEEEeC
Confidence 58999999853 2355666666556999999999995433211 344679999999
Q ss_pred CCCCC
Q 010191 368 NHERD 372 (515)
Q Consensus 368 NHE~~ 372 (515)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99974
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.54 E-value=8.1e-07 Score=87.19 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred EEEeecCCCCCCCCCcccccccCcHH-HHHHHHHhcCCCCEEEEcCccccC----CCchhHHHHHHHHHhhhhc-CCCEE
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLN-TTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~-~~~~l~~~~~~pDfVl~~GDi~y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (515)
++++|+|.+... +...+ .++.+.+...+||+|+++||+++. .......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987531 11112 233333322479999999999962 1112223445555666654 58999
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=86.11 Aligned_cols=196 Identities=15% Similarity=0.065 Sum_probs=91.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
++|+.++|+|....+ . -+.+....+..++++. .++| +++..||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 479999999943210 0 0112334445554442 3577 78999999954432 21222222222222222456
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccC----CCCCCceEEEEEeCCEE--EEEEcCCCCcC---C----
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVP----TENRAKFWYSTDYGMFR--FCIADTEQDWR---E---- 429 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P----~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~---~---- 429 (515)
+++||||+++...+ +-.... +.+.++. .....- .......|--++.++++ |+.+.+..... +
T Consensus 74 ~~~GNHe~d~g~~~-l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 74 VTIGNHEFDYGLDA-LAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred EeeccccccccHHH-HHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 77899998742210 000000 0001110 000000 00012234566778754 45554432110 0
Q ss_pred ---CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 430 ---GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 430 ---g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
-....+-+++..+.. +.+...+|++.|.+. .. . + .+...+ .+||++|+||.|.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~-~~--------------~-~-~la~~~--~giDlvlggH~H~~~~~ 209 (252)
T cd00845 150 GLPFEDLAEAVAVAEELL-AEGADVIILLSHLGL-DD--------------D-E-ELAEEV--PGIDVILGGHTHHLLEE 209 (252)
T ss_pred CceecCHHHHHHHHHHHH-hCCCCEEEEEeccCc-cc--------------h-H-HHHhcC--CCccEEEcCCcCcccCC
Confidence 011223343322221 245677999999886 11 0 1 222212 68999999999997764
Q ss_pred ccccCCc
Q 010191 507 CPIYQWH 513 (515)
Q Consensus 507 ~p~~~~~ 513 (515)
-..++++
T Consensus 210 ~~~~~~~ 216 (252)
T cd00845 210 PEVVNGT 216 (252)
T ss_pred CcccCCE
Confidence 3244443
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.7e-07 Score=84.48 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=33.1
Q ss_pred cCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhh--------------------cCCCEEEccCCCCCCC
Q 010191 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (515)
Q Consensus 324 ~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~v~GNHE~~~ 373 (515)
.-+||.|+++||+... +. .++|.+..+....+. ..+|++.++||||...
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 43 345544333332222 1489999999999963
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-06 Score=92.44 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=51.6
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhh-------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 355 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~------- 355 (515)
.+||++++|+|.+.... .. ........+++++++. .+++|+||++||+.+.... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~--~~-~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGEN--DP-VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccC--Cc-hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 48999999999874310 00 0111234455665543 2689999999999965432 1222233344432
Q ss_pred -----h----------------------hcCCCEEEccCCCCCC
Q 010191 356 -----I----------------------ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 -----l----------------------~~~vP~~~v~GNHE~~ 372 (515)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1379999999999974
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.4e-05 Score=75.45 Aligned_cols=65 Identities=17% Similarity=0.334 Sum_probs=42.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccC
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~G 367 (515)
+++++||+|.+... ......+.+++++ .++|.|+|+||+++ .+..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~---------~~~~~~~~~~~~~-~~~d~iih~GDi~~--------~~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRA---------SDLPAKFKKLLVP-GKIQHVLCTGNLCS--------KETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCc---------hhhHHHHHHHhcc-CCCCEEEECCCCCC--------HHHHHHHHhh--CCceEEEEC
Confidence 47899999965431 1122345555554 57999999999984 1222333333 247999999
Q ss_pred CCCCC
Q 010191 368 NHERD 372 (515)
Q Consensus 368 NHE~~ 372 (515)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.4e-06 Score=82.22 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=89.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHH---HHHHHHHhhhhcCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~v 360 (515)
++++.++|+|.-... ... +.+....+..++++. ++++ +++.+||+...... ..+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~--~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGG--PVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCC--CcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhc--CC
Confidence 478999999832211 001 112334455555442 4577 99999999954322 112 1222233322 22
Q ss_pred CEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCC-C---CCceEEEEEeCCEE--EEEEcCCCCc------
Q 010191 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE-N---RAKFWYSTDYGMFR--FCIADTEQDW------ 427 (515)
Q Consensus 361 P~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~~Ysfd~G~v~--fi~Ldt~~~~------ 427 (515)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 366899999864211 00000 000111111 00101111 0 12457778888854 5555544311
Q ss_pred CCC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 428 REG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 428 ~~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
..+ .+-.+.+++.++...+.+..-+|++.|-+. . +. + .+...+ .+||++|.||.|...
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-------------~d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-------------ND--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-------------hh--H-HHHHhC--CCCceEEecccceeE
Confidence 000 122233444333322246777999999875 1 00 1 222222 589999999999876
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.7e-05 Score=79.35 Aligned_cols=167 Identities=19% Similarity=0.256 Sum_probs=88.6
Q ss_pred CCCCEEEEcCccccCCCch-----------hHHHHHHHHHhhhh-cCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccc
Q 010191 325 KNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPIA-STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVL 392 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~~-----------~~wd~f~~~i~~l~-~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~ 392 (515)
.++|+||++||+.-..... ..+..|.+.++... ..+|.+++.||||.. .++.....|++.
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v--- 98 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEAS-----NYLWELPYGGWV--- 98 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCH-----HHHHhhcCCCee---
Confidence 4699999999996332111 12333444443322 467789999999952 111111111211
Q ss_pred ccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC---cC--------CCHHHHHHHH-------HHHhcccCCCCCEEEE
Q 010191 393 VENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD---WR--------EGTEQYRFIE-------HCLASVDRQKQPWLIF 454 (515)
Q Consensus 393 ~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---~~--------~g~~Q~~WL~-------~~La~~~r~~~pwiIv 454 (515)
....+.+-. ...+++++++|..|..... +. ....+...+. +.|... +.+--|+
T Consensus 99 ~~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIl 169 (262)
T cd00844 99 APNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIF 169 (262)
T ss_pred cCcEEEecC------CCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEE
Confidence 011122211 1245678999999886321 11 1122322211 112221 1122599
Q ss_pred EeccCCcCCCCCCCccC-------CCC-----CchhhHHHHHHHHHhcCCeEEEeCcccc-cccccccc
Q 010191 455 LAHRVLGYSSDLSYAVE-------GSF-----AEPMGRESLQKLWQKYKVDIAVFGHVHN-YERICPIY 510 (515)
Q Consensus 455 ~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~Ll~k~~VdlvlsGH~H~-YeRt~p~~ 510 (515)
+.|.|+ +.-... +.. ..+ ....|...+..|+++.+.+..|+||.|. |++..|-.
T Consensus 170 LSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~~ 236 (262)
T cd00844 170 LSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHE 236 (262)
T ss_pred EeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCCc
Confidence 999988 543221 110 000 0123567889999999999999999999 77665543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=80.24 Aligned_cols=199 Identities=16% Similarity=0.119 Sum_probs=92.2
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccCcHHHHHHHHHhc--CCCCEEEE-cCccccCCCchhHHH---------HHHHHH
Q 010191 287 QQVIIFGDMGKDEADG-SNEYNNFQRGSLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g-~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~-~GDi~y~~g~~~~wd---------~f~~~i 353 (515)
++|+.++|+|..-... ...-..-..+....+..++++. .++|.+++ +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999998542110 0000000112334445555432 35777766 999995432 12221 122333
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeC-CEEE--EEEcCCCC-
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYG-MFRF--CIADTEQD- 426 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G-~v~f--i~Ldt~~~- 426 (515)
..+ .. -+.++||||+++... .+... -.+.+.++- ....... ......|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~-d~~~lGNHe~d~g~~--~l~~~--~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GY-DAGTLGNHEFNYGLD--YLDKV--IKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CC-CEEeecccCcccCHH--HHHHH--HHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 332 33 366789999875211 00000 000001110 0000000 0112345667888 7554 44433321
Q ss_pred -c-----------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCe
Q 010191 427 -W-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (515)
Q Consensus 427 -~-----------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vd 493 (515)
+ ....+..++..+.|++ .+...+|+++|-.. ..... .... .+.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~~----~~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESLT----GENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----cccC----CccHHHHHHhcCCCCc
Confidence 0 0112234444445544 35678999999886 21100 0000 02223344444 6899
Q ss_pred EEEeCccccccc
Q 010191 494 IAVFGHVHNYER 505 (515)
Q Consensus 494 lvlsGH~H~YeR 505 (515)
++|.||.|....
T Consensus 221 ~IlgGHsH~~~~ 232 (277)
T cd07410 221 AILTGHQHRRFP 232 (277)
T ss_pred EEEeCCCccccc
Confidence 999999998654
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.5e-06 Score=81.27 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=45.4
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCC-----CchhHHHHH-HHHHhhhhcCCC
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~-----g~~~~wd~f-~~~i~~l~~~vP 361 (515)
++++|+|.+.... ........+.... .++|.++++||+.+.- ......... ...++.....++
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1122333333322 4899999999999631 111112222 334444566899
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.3e-06 Score=80.17 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----------CCCCEEEEcCccccCCCchhHHHHHHHHHhh--hh
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEP--IA 357 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~--l~ 357 (515)
+++||+|. ....++++++.. .+.|.++++||+++.+....+--+++..+.. ..
T Consensus 1 ~vi~DIHG---------------~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~ 65 (208)
T cd07425 1 VAIGDLHG---------------DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAK 65 (208)
T ss_pred CEEeCccC---------------CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHh
Confidence 47899964 345777777653 2579999999999543332221122222211 12
Q ss_pred cCCCEEEccCCCCCC
Q 010191 358 STVPYMIASGNHERD 372 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~ 372 (515)
...+++++.||||..
T Consensus 66 ~~~~v~~l~GNHE~~ 80 (208)
T cd07425 66 AGGKVHFLLGNHELM 80 (208)
T ss_pred cCCeEEEeeCCCcHH
Confidence 357899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.2e-05 Score=75.39 Aligned_cols=190 Identities=12% Similarity=0.080 Sum_probs=89.6
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccCcHHHHHHHHHhc--C-CCCEE-EEcCccccCCCchhHHHHHHHHH
Q 010191 287 QQVIIFGDMGKDEADGS---------NEYNNFQRGSLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~---------~~y~~~~~~~~~~~~~l~~~~--~-~pDfV-l~~GDi~y~~g~~~~wd~f~~~i 353 (515)
++|+.++|+|..-.+.. ..+.. .+-...+..++++. . ++|.+ +.+||+...... ..+.... .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46888888876432110 01111 12344555555542 3 78877 579999954432 2222111 22
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeCC--EEEEEEcCCCCcC
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGM--FRFCIADTEQDWR 428 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~ 428 (515)
-.++..+++.++.||||++....+ +... -.+.+.++- ....... ...-+.|.-++.++ +-+|.+.+.....
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~~--l~~~--~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPER--VREL--FGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHHH--HHHH--HhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 223334666666699998742110 0000 000011110 0000000 00112355578888 4556665542110
Q ss_pred --C--------CHHHHHHHHHHHhccc-CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 010191 429 --E--------GTEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (515)
Q Consensus 429 --~--------g~~Q~~WL~~~La~~~-r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 496 (515)
+ .....+.+++.+++.. ..+...+|++.|-+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0123344544433321 145678999999775 10 0 1 1 2222 6799999
Q ss_pred eCcccccc
Q 010191 497 FGHVHNYE 504 (515)
Q Consensus 497 sGH~H~Ye 504 (515)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999753
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00014 Score=72.45 Aligned_cols=185 Identities=16% Similarity=0.163 Sum_probs=92.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
|++++||.=-.. |. ......+.++.++ .++||++..||.+-.. +.. ....+.+..+ .+- .++.
T Consensus 1 ~ilfigdi~g~~--G~-------~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D-~iTl 64 (255)
T cd07382 1 KILFIGDIVGKP--GR-------KAVKEHLPKLKKE-YKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVD-VITM 64 (255)
T ss_pred CEEEEEeCCCHH--HH-------HHHHHHHHHHHHH-CCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCC-EEEe
Confidence 588999982110 00 0012334444433 4699999999998433 222 1222222222 333 4555
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcC--CCCcCCCHHHHHHHHHHHhcc
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEHCLASV 444 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~g~~Q~~WL~~~La~~ 444 (515)
||||++...--.+++..+ .+.. --++|.......|.-++.+++++-+++- ......-..-++-+++.+++.
T Consensus 65 GNH~fD~gel~~~l~~~~------~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~l 137 (255)
T cd07382 65 GNHTWDKKEILDFIDEEP------RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEEL 137 (255)
T ss_pred cccccCcchHHHHHhcCc------CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHH
Confidence 999998542111111100 0010 0122222224457778888876655543 221111122233456666655
Q ss_pred cCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccccccc-CCc
Q 010191 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIY-QWH 513 (515)
Q Consensus 445 ~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~-~~~ 513 (515)
.. +...+||.+|--. ++ + ..++.. ...-+||+++.||+|..---.-+. +++
T Consensus 138 k~-~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~~il~~gT 189 (255)
T cd07382 138 KE-EADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADERILPGGT 189 (255)
T ss_pred hc-CCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCccEEeeCCe
Confidence 42 5678999999642 11 1 223332 223469999999999975444333 443
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.1e-05 Score=80.40 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=50.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCch-hHHHHHHHHHhhhhc-C-CC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~-~-vP 361 (515)
+||++++|+|.+..-.... .. ......++++++. .+++|+|+++||+.+..... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4899999999875421100 00 0012234444432 25799999999999754322 222334455555543 3 89
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00016 Score=73.33 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=42.4
Q ss_pred eEEEEEeecCCCCCCCCCcc-cccccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEY-NNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y-~~~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
++++.++|+|..-... .+ ..-+.+....+..++++. ..+ .+++..||+.......+.+..-...++ ++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~--~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~-~~n~~g~ 77 (288)
T cd07412 1 VQILAINDFHGRLEPP--GKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIE-ALNAMGV 77 (288)
T ss_pred CeEEEEeccccCccCC--CCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHH-HHHhhCC
Confidence 4789999998432110 00 000112344455555542 234 489999999954333222111011122 2223333
Q ss_pred -EEccCCCCCCC
Q 010191 363 -MIASGNHERDW 373 (515)
Q Consensus 363 -~~v~GNHE~~~ 373 (515)
++++||||+++
T Consensus 78 Da~t~GNHefd~ 89 (288)
T cd07412 78 DASAVGNHEFDE 89 (288)
T ss_pred eeeeeccccccc
Confidence 57789999975
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00013 Score=72.75 Aligned_cols=196 Identities=15% Similarity=0.129 Sum_probs=88.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-CCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (515)
++++.++|+|..-..... +.+....+..++++.. +.++++.+||+..... ...+..-...++.+.. ..-+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 479999999864321000 1122334455554422 5789999999985422 1111111122222222 3344
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCCC--CCceEEEEEeC-C--EEEEEEcCCCC--c-CC----C
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTEN--RAKFWYSTDYG-M--FRFCIADTEQD--W-RE----G 430 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~~--~~~~~Ysfd~G-~--v~fi~Ldt~~~--~-~~----g 430 (515)
.++||||+++.... +-... .+.+.|+- ........+ .-..|.-++.+ + |-|+.+-+... . .+ +
T Consensus 74 ~~~GNHefd~G~~~-l~~~~---~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 74 VTPGNHEFDYGLDR-LKELS---KEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred EccccccccCCHHH-HHHHH---hhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 56899999742110 00000 00001110 000000000 01224455676 5 55666655421 0 00 0
Q ss_pred ---HHHHHHHHHH-HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 431 ---TEQYRFIEHC-LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 431 ---~~Q~~WL~~~-La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.+-.+-+++. .....+.+..-+|++.|.+..+... . .. ...+.. .-.+||++|.||.|.....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~-------~---~~-~~~la~--~~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS-------P---WT-STELAA--NVTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC-------C---cc-HHHHHH--hCCCceEEEeCCCcccccC
Confidence 0112223333 2222224677899999988622110 0 01 112222 2258999999999997654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00023 Score=72.19 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=29.9
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
.+..-+|++.|-.. +... ..... .+. ...+...+...+||++|.||.|....
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 35677999999875 3211 00100 011 22333333346899999999998663
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.3e-05 Score=82.87 Aligned_cols=84 Identities=15% Similarity=0.268 Sum_probs=52.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhhhh-cCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIA-STVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l~-~~vP~ 362 (515)
+||++++|+|.+... .+..... ......+.++++. ..++||||++||+.+.+.. ...-..+.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 489999999998321 1111111 1122344444433 2579999999999965432 222234556666554 48999
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999974
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.6e-05 Score=77.56 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=73.6
Q ss_pred CCceEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHH---hcCCCCEEEEcCccccCCC--chhHHHHHHHHHhhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQ---DLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPI 356 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~---~~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l 356 (515)
+..+|+++++|.|.-...+...+..+-. ++-.-+.+... ..-+||.++++||+.+.+. ..++|.+..+.++.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 4569999999999865321111110000 00001112111 1358999999999996432 256777665556665
Q ss_pred hc---CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC
Q 010191 357 AS---TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD 426 (515)
Q Consensus 357 ~~---~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~ 426 (515)
.. .+|++.++||||.+.... .-.....||.-- -++...+|+.|++.|+++|++.-
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~~---fg~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFESV---FGPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc------------cchhHHHHHHHh---hcchhhhhccCCceeEEeeehhh
Confidence 53 799999999999963210 000111222100 01234579999999999998863
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00032 Score=71.01 Aligned_cols=199 Identities=13% Similarity=0.110 Sum_probs=91.0
Q ss_pred ceEEEEEeecCCCCCCCCCccccc--c-cCcHHHHHHHHHh--cCCCC-EEEEcCccccCCCchhHHH-HHHHHHhhhhc
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNF--Q-RGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 358 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~--~-~~~~~~~~~l~~~--~~~pD-fVl~~GDi~y~~g~~~~wd-~f~~~i~~l~~ 358 (515)
.++|+.++|+|..-.. ....... . .+....++++.+. .++++ +++.+||+...... .... .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~-~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~-~~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGG-HLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL-SDASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcC-cCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec-eeeecCCChHHHHHHH
Confidence 4899999999953211 0000000 0 0111222333221 13455 67889999954322 1111 00122333444
Q ss_pred CCCE-EEccCCCCCCCCCCC-CCCCCCCCCCccccccc-ceeccCCC--C---CCceEEEEEeC-CEE--EEEEcCCCC-
Q 010191 359 TVPY-MIASGNHERDWPGTG-SFYGNMDSGGECGVLVE-NMFYVPTE--N---RAKFWYSTDYG-MFR--FCIADTEQD- 426 (515)
Q Consensus 359 ~vP~-~~v~GNHE~~~~~~g-~~y~~~dsgge~g~~~~-~~f~~P~~--~---~~~~~Ysfd~G-~v~--fi~Ldt~~~- 426 (515)
.++| .+++||||++....+ ..+... ..+...|+- ........ . ....|.-++.+ +++ +|.+-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5665 678999999742211 000000 000001110 00100000 0 11235566765 644 566654421
Q ss_pred ------cCCC--HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 010191 427 ------WREG--TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVD-IAV 496 (515)
Q Consensus 427 ------~~~g--~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~Vd-lvl 496 (515)
+... ..+.+|+.+.|++ .+..-+|++.|... .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35677999999874 21 111 0 11122233343 577 799
Q ss_pred eCcccccc
Q 010191 497 FGHVHNYE 504 (515)
Q Consensus 497 sGH~H~Ye 504 (515)
.||.|...
T Consensus 225 ~GHsH~~~ 232 (282)
T cd07407 225 GGHSHVRD 232 (282)
T ss_pred eCCccccc
Confidence 99999753
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.7e-05 Score=79.94 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=49.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHH--Hhhhh-cCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~--i~~l~-~~v 360 (515)
+||++++|+|.+..... .+ ........++++++. ..++|+|+++||+..... ....-..+... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-PW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-hh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999754211 00 011122344554432 268999999999996542 22111123322 33343 379
Q ss_pred CEEEccCCCCCC
Q 010191 361 PYMIASGNHERD 372 (515)
Q Consensus 361 P~~~v~GNHE~~ 372 (515)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.2e-05 Score=81.30 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=47.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhH-HHHHHHHHhhhhc-CCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~-wd~f~~~i~~l~~-~vP~ 362 (515)
+||++++|+|.+..-. ..... ......++++++. ..+||+|+++||+.+....... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~--~~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFY--SKSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCccc--CcccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 4899999999974310 00000 0011123333332 2689999999999964332211 1223333344432 6899
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00056 Score=69.20 Aligned_cols=79 Identities=15% Similarity=0.053 Sum_probs=45.5
Q ss_pred eEEEEEeCCEE--EEEEcCCCCc---C--CC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCc
Q 010191 407 FWYSTDYGMFR--FCIADTEQDW---R--EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (515)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~~---~--~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~ 476 (515)
.|.-++.++++ ||.+-+.... . .+ .+..+.+++.++++...+..-+|++.|-.. . +
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 35567888854 5555443210 0 11 233455666666554345777899999764 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 477 PMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 477 ~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
. + .+...+ .+||+++.||.|..-
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 689999999999975
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00096 Score=66.77 Aligned_cols=182 Identities=14% Similarity=0.093 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.|++++||.=-.. |. ....+.+.++.++ .++||++..||.+-.+ |... ...+.+.. ..+-++.+
T Consensus 1 m~ilfiGDi~G~~--Gr-------~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~~--~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA--GR-------KIVKNNLPQLKSK-YQADLVIANGENTTHGKGLTL---KIYEFLKQ--SGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH--HH-------HHHHHHHHHHHHh-CCCCEEEEcCcccCCCCCCCH---HHHHHHHh--cCCCEEEc
Confidence 3799999983110 00 0011233444333 4799999999999432 2221 11222221 24555555
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC-CcC-C--CHHHHHHHHHHH
Q 010191 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ-DWR-E--GTEQYRFIEHCL 441 (515)
Q Consensus 366 ~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~-~~~-~--g~~Q~~WL~~~L 441 (515)
|||+++... .+...+.. +. .....++|....+.-|..++.++.++-+++-.. .+. + ...-.+-+++.+
T Consensus 66 -GNH~~Dkge---~~~~i~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKL---ILDVVINQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcH---HHHHHhcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 999998542 11111110 10 011123343333444666788887766665321 111 1 111223355555
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPI 509 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~ 509 (515)
++.. .+++.+||.+|--- .. .+.....+.+-+|++|+.-|+|.-----.+
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCccee
Confidence 5543 24678999999542 01 345577788889999999999986543333
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.6e-05 Score=68.72 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=69.2
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc
Q 010191 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE 394 (515)
Q Consensus 315 ~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~ 394 (515)
..++.+.++...+|++|.+||+.-.+....+|..+..- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~------------------------ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP------------------------ 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC------------------------
Confidence 34444444456799999999999654443333333322 2234789999999986
Q ss_pred ceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccC-CC
Q 010191 395 NMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE-GS 473 (515)
Q Consensus 395 ~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~-~~ 473 (515)
+.-|++.|.|+ +......... ..
T Consensus 69 -------------------------------------------------------~~DILlTh~wP-~gi~~~~~~~~~~ 92 (150)
T cd07380 69 -------------------------------------------------------GVDILLTSEWP-KGISKLSKVPFEE 92 (150)
T ss_pred -------------------------------------------------------CCCEEECCCCc-hhhhhhCCCcccc
Confidence 22478888877 5432110000 00
Q ss_pred CCchhhHHHHHHHHHhcCCeEEEeCccc-ccccc
Q 010191 474 FAEPMGRESLQKLWQKYKVDIAVFGHVH-NYERI 506 (515)
Q Consensus 474 ~~~~~~r~~l~~Ll~k~~VdlvlsGH~H-~YeRt 506 (515)
-....+...+..+.++.+..+.|+||.| .|||-
T Consensus 93 ~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 93 TLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred cccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 0012246688889999999999999999 77764
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00066 Score=81.49 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=90.3
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEE-cCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 283 ~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~-~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
+...++++.++|+|..- . ....+..++++ ..+++.+++ +||++..... ..+..-...++.+ ..
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~-----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~l-n~ 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-D-----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMM-KE 722 (1163)
T ss_pred CceEEEEEEEeecccCC-C-----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHH-hC
Confidence 33459999999999431 1 11223333332 146777655 9999854321 2111111222222 22
Q ss_pred CCE-EEccCCCCCCCCCCC--CCCCCCC--CC--C--ccccccc-ceeccCCCC----CCceEEEEEeCCE--EEEEEcC
Q 010191 360 VPY-MIASGNHERDWPGTG--SFYGNMD--SG--G--ECGVLVE-NMFYVPTEN----RAKFWYSTDYGMF--RFCIADT 423 (515)
Q Consensus 360 vP~-~~v~GNHE~~~~~~g--~~y~~~d--sg--g--e~g~~~~-~~f~~P~~~----~~~~~Ysfd~G~v--~fi~Ldt 423 (515)
+.+ ++++||||+++.... .+..... .. . ....|+- ........+ ....|.-++.+++ -||.+-+
T Consensus 723 lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 723 MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 333 669999999753210 0000000 00 0 0001110 111111111 1134666788884 4566654
Q ss_pred CCC---cCC----C---HHHHHHHHHHHhccc-CCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cC
Q 010191 424 EQD---WRE----G---TEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YK 491 (515)
Q Consensus 424 ~~~---~~~----g---~~Q~~WL~~~La~~~-r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~ 491 (515)
... ..+ + .+..+.+++..++.. ..+...+|++.|... ... . ..+ ......|.++ .+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 001 0 122233444433332 145778999999875 211 0 001 1122334444 47
Q ss_pred CeEEEeCcccccc
Q 010191 492 VDIAVFGHVHNYE 504 (515)
Q Consensus 492 VdlvlsGH~H~Ye 504 (515)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999864
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00089 Score=74.18 Aligned_cols=199 Identities=18% Similarity=0.130 Sum_probs=88.2
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc------CC-CCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~------~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
...++|+.++|+|..-... .+. ..-...+..++++. .+ .-+++.+||+.... ....+..- ..+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 111 11122333333321 13 34888999998432 22211110 111112
Q ss_pred hcCCCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC--CCCCceEEEEEeCCEE--EEEEcCCCC--c-
Q 010191 357 ASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGMFR--FCIADTEQD--W- 427 (515)
Q Consensus 357 ~~~vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 427 (515)
+..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 55679999986321 110000 01111111 0011111 0112346667888855 555544321 1
Q ss_pred CCC-------HHHHHHHHHHHhcccC-CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh---cCCeEEE
Q 010191 428 REG-------TEQYRFIEHCLASVDR-QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK---YKVDIAV 496 (515)
Q Consensus 428 ~~g-------~~Q~~WL~~~La~~~r-~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k---~~Vdlvl 496 (515)
.+. .+..+-+++.+++... .+..-+|++.|..+ ..... ....... . ..|.++ .+||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~~~~~~--d---~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HGSNAPG--D---VEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cCCCCcc--H---HHHHHhCCccCceEEE
Confidence 010 1112223333333321 35777999999876 22110 0000000 1 233444 3799999
Q ss_pred eCccccc
Q 010191 497 FGHVHNY 503 (515)
Q Consensus 497 sGH~H~Y 503 (515)
.||.|.+
T Consensus 251 gGHsH~~ 257 (551)
T PRK09558 251 GGHSQDP 257 (551)
T ss_pred eCCCCcc
Confidence 9999975
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00029 Score=68.45 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=46.9
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCchhHHHHHH----HHHhhhhc-CCCEE
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFT----AQIEPIAS-TVPYM 363 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~----~~i~~l~~-~vP~~ 363 (515)
++++|+|.++.. +.....+.+.++. ..+.|.++++||++..=--...|.+.. ..+..++. .+|++
T Consensus 1 lFISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred CeeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 368999998431 3333455566654 234699999999996411112444443 33444444 59999
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||.-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999963
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00089 Score=73.57 Aligned_cols=205 Identities=14% Similarity=0.131 Sum_probs=96.8
Q ss_pred CCCCCceEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHHh---cCCCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 281 PGQDSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 281 ~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~~---~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
......++|+..+|+|..-.. ..|..... +....+..++++ ..+..++|.+||+......... ..-...+-.
T Consensus 21 ~~~~~~l~ilhtnD~H~~l~~--~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 21 AAETVKLTILHTNDLHGHLEP--YDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred ccCceeEEEEEecccccccee--ccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 334556999999999975431 11111111 122222333322 1235689999999965332211 110111222
Q ss_pred hhcCCCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc--ceeccCCC--CCCceEEEEEeCCE--EEEEEcCCC--C
Q 010191 356 IASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE--NMFYVPTE--NRAKFWYSTDYGMF--RFCIADTEQ--D 426 (515)
Q Consensus 356 l~~~vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~--~~f~~P~~--~~~~~~Ysfd~G~v--~fi~Ldt~~--~ 426 (515)
++..++| ..++||||++.... ++.. .-.+...|+. ..+.-+.. ..-+.|.-++.+++ -+|.+.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~--~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALAR--LLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHH--HHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2334444 78899999985321 0000 0000001110 00111111 11356778888884 456666422 1
Q ss_pred cCC--------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeC
Q 010191 427 WRE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFG 498 (515)
Q Consensus 427 ~~~--------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsG 498 (515)
+.. -....+++++.+.+...+...-+|++.|-+. ...... .... ... ..... .++|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~--~~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEV--PGD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-cccc--ccc--ccccc-----cCcceEecc
Confidence 111 1244566666666654333667999999886 222111 1000 000 11111 449999999
Q ss_pred ccccc
Q 010191 499 HVHNY 503 (515)
Q Consensus 499 H~H~Y 503 (515)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00043 Score=65.22 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=43.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCch-----hHHHHHHHHHhhhhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~-----~~wd~f~~~i~~l~~~vP 361 (515)
.|++++||+|.+. + ..+.+.+.+++ .++|.|+|+||+++..... ...++..+.++.+ ..+
T Consensus 1 mri~viSD~Hg~~-----------~-~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL-----------P-ATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH-----------H-HHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 3799999999431 1 22333333332 6899999999999532210 0122333334332 468
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++++.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00035 Score=65.31 Aligned_cols=55 Identities=22% Similarity=0.279 Sum_probs=34.7
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCch-hHHHHHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 317 TRQLIQDLKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 317 ~~~l~~~~~~pDfVl~~GDi~y~~g~~-~~wd~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
+.+++++ .+||.|+++||+.+..... .+..............+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 3334433 6899999999999654321 11111112233345689999999999975
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00048 Score=68.03 Aligned_cols=76 Identities=13% Similarity=0.306 Sum_probs=47.5
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----CCCCEEEEcCccccCCC----c---------hhHHHHHHHH
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----~~pDfVl~~GDi~y~~g----~---------~~~wd~f~~~ 352 (515)
++++|+|.+... . .....+.+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 011122333333322 25799999999996521 0 1224455666
Q ss_pred HhhhhcCCCEEEccCCCCCC
Q 010191 353 IEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 353 i~~l~~~vP~~~v~GNHE~~ 372 (515)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 77777789999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00049 Score=64.10 Aligned_cols=77 Identities=14% Similarity=0.218 Sum_probs=42.9
Q ss_pred EEEeecCCCCCCCC----CcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 290 IIFGDMGKDEADGS----NEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 290 ~v~gD~g~~~~~g~----~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.+++|+|.+..... ..+...+......++++.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 47889988764210 01111000011233334443567899999999996433 2222 2333332 4689999
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
.||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00079 Score=65.90 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=50.9
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--CcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~--~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
.+.++++|+|.+............+ ...++++++.+. ..++|.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 4588999999874210000000001 112345555442 257999999999997554434555555555544 3599
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999974
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00099 Score=67.15 Aligned_cols=64 Identities=17% Similarity=0.315 Sum_probs=44.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+++++||+|. ....+++++++. ++.|.++++||+++ .|..+ .+..+.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG---------------~~~~l~~ll~~~~~~~~~D~li~lGDlVd-rGp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQG---------------CYDELQRLLEKIDFDPAKDTLWLVGDLVN-RGPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCC---------------CHHHHHHHHHhcCCCCCCCEEEEeCCccC-CCcCH--HHHHHHHHhc--CCCeEE
Confidence 5789999974 345677777764 46899999999995 44322 2333333333 346899
Q ss_pred ccCCCCC
Q 010191 365 ASGNHER 371 (515)
Q Consensus 365 v~GNHE~ 371 (515)
+.||||.
T Consensus 62 VlGNHD~ 68 (275)
T PRK00166 62 VLGNHDL 68 (275)
T ss_pred EecChhH
Confidence 9999997
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0012 Score=64.97 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----C--------CCCEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----~--------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
|++++||+|- ....+++++++. . +.|.++++||+++. |..+ .+-.+.+..
T Consensus 2 ~i~vigDIHG---------------~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHG---------------CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCC---------------CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 6899999974 345677777764 1 36899999999954 4322 233344444
Q ss_pred hhcCCCEEEccCCCCC
Q 010191 356 IASTVPYMIASGNHER 371 (515)
Q Consensus 356 l~~~vP~~~v~GNHE~ 371 (515)
+...-.+.++.||||.
T Consensus 64 l~~~~~~~~v~GNHE~ 79 (234)
T cd07423 64 MVAAGAALCVPGNHDN 79 (234)
T ss_pred HhhCCcEEEEECCcHH
Confidence 3333467899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.011 Score=65.46 Aligned_cols=190 Identities=17% Similarity=0.124 Sum_probs=85.2
Q ss_pred eEEEEEeecCCCCCCC--------CCcccccccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHHHHHhh
Q 010191 287 QQVIIFGDMGKDEADG--------SNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEP 355 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g--------~~~y~~~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~ 355 (515)
++|+.++|+|..-... ...+. ..+....+..++++. +.+ -+++.+||+...... ..+..-...++
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~--~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~-~~~~~g~~~i~- 76 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKA--AIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLY-FTLFGGRADAA- 76 (550)
T ss_pred CEEEEEccccccccCcccccccCCCcccc--ccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccc-hhhcCCHHHHH-
Confidence 4789999998542110 00000 112233444444432 223 488899999853321 11111011122
Q ss_pred hhcCCC-EEEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCCC----CCCceEEEEEeCC--EEEEEEcCCCC-
Q 010191 356 IASTVP-YMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE----NRAKFWYSTDYGM--FRFCIADTEQD- 426 (515)
Q Consensus 356 l~~~vP-~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~~----~~~~~~Ysfd~G~--v~fi~Ldt~~~- 426 (515)
++..+. =+.++||||+++.... +... -.+...|+- ........ ..-..|.-++.++ |-||.+.+...
T Consensus 77 ~~N~~g~Da~~lGNHEFd~G~~~--l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~ 152 (550)
T TIGR01530 77 LMNAAGFDFFTLGNHEFDAGNEG--LKEF--LEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKT 152 (550)
T ss_pred HHhccCCCEEEeccccccCCHHH--HHHH--HHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCccc
Confidence 222333 3678999999853210 0000 000001110 00000000 0123456678887 56777765221
Q ss_pred c---CCC-----HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEe
Q 010191 427 W---REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVF 497 (515)
Q Consensus 427 ~---~~g-----~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvls 497 (515)
. .++ ....+=+++..+.....+..-+|++.|... . +. . .|.++ .+||++|.
T Consensus 153 ~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~------------~d--~----~la~~~~~iD~Iig 212 (550)
T TIGR01530 153 VESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--E------------KN--C----EIAQKINDIDVIVS 212 (550)
T ss_pred ccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--H------------HH--H----HHHhcCCCCCEEEe
Confidence 1 111 011111222222222145677999999653 1 00 1 12233 47999999
Q ss_pred Ccccccc
Q 010191 498 GHVHNYE 504 (515)
Q Consensus 498 GH~H~Ye 504 (515)
||.|.+-
T Consensus 213 GHsH~~~ 219 (550)
T TIGR01530 213 GDSHYLL 219 (550)
T ss_pred CCCCccc
Confidence 9999964
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0017 Score=71.09 Aligned_cols=82 Identities=15% Similarity=0.297 Sum_probs=51.4
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHH-HHHHHh-------cCCCCEEEEcCccccCCCc-------------
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT-RQLIQD-------LKNIDIVFHIGDICYANGY------------- 342 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~-~~l~~~-------~~~pDfVl~~GDi~y~~g~------------- 342 (515)
+...++++++|+|.+... + .....+.+ +.+... ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 0 01111222 222211 2468999999999964221
Q ss_pred hhHHHHHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 343 ~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
..+++.+.+.++.+.+.+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112344556667777789999999999974
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0094 Score=54.14 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=45.1
Q ss_pred EEEEEeecCCCCCCCC--CcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 288 QVIIFGDMGKDEADGS--NEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~--~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.+.++||+|.+...-- ..+++...-....+....+....-|.+.|+||++...... ......++.+-.++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 4678899988764211 1122211111123333333345568999999999644332 23344555554444 899
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999975
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0014 Score=64.48 Aligned_cols=66 Identities=14% Similarity=0.267 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---C-CCCEEEEcCccccCCCchhHHHHHHHHHhh-hhcCCCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---K-NIDIVFHIGDICYANGYISQWDQFTAQIEP-IASTVPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~-~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~-l~~~vP~ 362 (515)
|++++||+|.. ...++++++.. . ..|.++++||+++ +|..+ .+..+.+.. +....++
T Consensus 2 ~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s--~~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYVD-RGKRS--KDVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCCh--HHHHHHHHHHhhcCCCe
Confidence 68999999842 23345555443 1 3599999999995 44332 122222222 2234678
Q ss_pred EEccCCCCC
Q 010191 363 MIASGNHER 371 (515)
Q Consensus 363 ~~v~GNHE~ 371 (515)
++++||||.
T Consensus 64 ~~l~GNHE~ 72 (235)
T PHA02239 64 VTLLGNHDD 72 (235)
T ss_pred EEEECCcHH
Confidence 999999996
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0089 Score=56.00 Aligned_cols=90 Identities=13% Similarity=0.217 Sum_probs=55.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.++++++|+|...+ ......++.. .+++|+|+|+||.+..... . .++.. -..++++|.
T Consensus 2 m~ilviSDtH~~~~------------~~~~~~~~~~-~~~~d~vih~GD~~~~~~~-~-------~l~~~-~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEKALKIFN-LEKVDAVIHAGDSTSPFTL-D-------ALEGG-LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChh------------hhhHHHHHhh-hcCCCEEEECCCcCCccch-H-------Hhhcc-cccceEEEE
Confidence 58999999997542 1122222222 3789999999999954321 1 11110 157889999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~ 425 (515)
||.|..... -..|. --.+..++++|+++..-.
T Consensus 60 GN~D~~~~~---------------------~~~p~------~~~~~~~g~ki~l~HGh~ 91 (172)
T COG0622 60 GNCDGEVDQ---------------------EELPE------ELVLEVGGVKIFLTHGHL 91 (172)
T ss_pred ccCCCcccc---------------------ccCCh------hHeEEECCEEEEEECCCc
Confidence 999985100 00111 135889999999988744
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=62.50 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=42.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
|++++||+|.. ...++++++.. .++|.++++||+++.+... .+ .++.+.. .++++
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~---~~~~l~~-~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LA---CLELLLE-PWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HH---HHHHHhc-CCEEE
Confidence 68999999732 34566666653 3589999999999644332 12 2232222 46899
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0088 Score=61.51 Aligned_cols=39 Identities=26% Similarity=0.180 Sum_probs=25.4
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCcccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 504 (515)
++..-+|++.|-.- +. + . ..|.++ .+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~---d---~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------I---E---QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------h---H---HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999631 11 0 1 123344 479999999999874
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.002 Score=63.92 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=43.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC-----------CCCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~-----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
|+.++||+|- ....+.+++++.. +-|-++++||+++ +|..+ .+-++.+..+
T Consensus 2 ~~~vIGDIHG---------------~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHG---------------CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECcc---------------CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 6899999973 3466777776531 3478999999995 44322 1223333333
Q ss_pred hcCCCEEEccCCCCC
Q 010191 357 ASTVPYMIASGNHER 371 (515)
Q Consensus 357 ~~~vP~~~v~GNHE~ 371 (515)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0027 Score=61.96 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=42.9
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC----------CCCEEEEcCccccCCCchhHHHHHHHHHhhhhc
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 358 (515)
+.++||+|- ....++++++++. ..|.++++||+++. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG---------------~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHG---------------HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccC---------------CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 368999964 3567777777641 35799999999954 4322 223333333333
Q ss_pred CCCEEEccCCCCCC
Q 010191 359 TVPYMIASGNHERD 372 (515)
Q Consensus 359 ~vP~~~v~GNHE~~ 372 (515)
.-.+.++.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 33688999999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.013 Score=67.17 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=47.7
Q ss_pred EcCCCCCCCCceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHH-
Q 010191 276 KASPYPGQDSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQF- 349 (515)
Q Consensus 276 ~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f- 349 (515)
.+.|..+..-.++|+..+|+|..-.+ ...|.. -..+-+..+..++++. +.+ -++|..||++...-. ..+...
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~-~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl-~~~~a~~ 182 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVN-YDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPL-GTYKAIV 182 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCccc-ccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-cchhhhc
Confidence 34455555556999999999975321 101110 0111223333444432 223 478899999954321 111000
Q ss_pred -------HHHHhhhhcCCCE-EEccCCCCCCC
Q 010191 350 -------TAQIEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 350 -------~~~i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
...+-.++..+.| ..++||||+++
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhccc
Confidence 0112222333443 67899999985
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.04 Score=54.93 Aligned_cols=138 Identities=11% Similarity=0.115 Sum_probs=76.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHH-h---------cCCCCEEEEcCccccCCCc----------------
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~-~---------~~~pDfVl~~GDi~y~~g~---------------- 342 (515)
+++++|++.+... . ....++.+.+.+. + ..++.-++++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987531 1 1112223222222 1 1234579999999974321
Q ss_pred ---hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccc---ceeccCCCCCCceEEEEEeCCE
Q 010191 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE---NMFYVPTENRAKFWYSTDYGMF 416 (515)
Q Consensus 343 ---~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G~v 416 (515)
..+.+++...+..+.+.+|+.+.|||||-.... . ....-.+|-.+-. ..+..- .|. |.|+.+++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~----l-PQqplh~~lfp~s~~~~~~~~v----tNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS----L-PQQPLHRCLFPKSSNYSTLNLV----TNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc----C-CCCCCCHHHhhcccccCCcEEe----CCC-eEEEECCE
Confidence 223445556677788899999999999964210 0 0000011100000 011111 122 56999999
Q ss_pred EEEEEcCCC-----CcCCCHHHHHHHHHHHhc
Q 010191 417 RFCIADTEQ-----DWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 417 ~fi~Ldt~~-----~~~~g~~Q~~WL~~~La~ 443 (515)
+|++.+... .+.+.+.-.+.|++.|+-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 999988764 123344556778888765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0032 Score=61.21 Aligned_cols=64 Identities=14% Similarity=0.228 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
-|++++||+|- ....+++++++.. +.|-++++||+++.+.... +.++-+.. ..+.
T Consensus 17 ~ri~vigDIHG---------------~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~------~vl~~l~~-~~~~ 74 (218)
T PRK11439 17 RHIWLVGDIHG---------------CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL------RCLQLLEE-HWVR 74 (218)
T ss_pred CeEEEEEcccC---------------CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH------HHHHHHHc-CCce
Confidence 38999999974 3456777777642 5789999999995433221 12222222 3467
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 75 ~v~GNHE~~ 83 (218)
T PRK11439 75 AVRGNHEQM 83 (218)
T ss_pred EeeCchHHH
Confidence 899999953
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0047 Score=60.12 Aligned_cols=63 Identities=16% Similarity=0.303 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
-|++++||+|.. ...+++++++. ++.|.++++||+++.+.... +.++.+. .-.+.
T Consensus 15 ~ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~------~~l~~l~-~~~~~ 72 (218)
T PRK09968 15 RHIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL------NVLRLLN-QPWFI 72 (218)
T ss_pred CeEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH------HHHHHHh-hCCcE
Confidence 389999999743 45667776654 36899999999995433322 2222222 22468
Q ss_pred EccCCCCC
Q 010191 364 IASGNHER 371 (515)
Q Consensus 364 ~v~GNHE~ 371 (515)
.+.||||.
T Consensus 73 ~v~GNHE~ 80 (218)
T PRK09968 73 SVKGNHEA 80 (218)
T ss_pred EEECchHH
Confidence 99999996
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0062 Score=60.79 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=42.1
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.++||+|- ....++++++++ ++.|.++++||+++ .|..+ .+.++.+..+. -.+.++.
T Consensus 2 yvIGDIHG---------------~~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQG---------------CYDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCC---------------CHHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 68999974 345677777664 35799999999995 44332 22333333332 3678999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999964
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0088 Score=60.48 Aligned_cols=66 Identities=20% Similarity=0.288 Sum_probs=39.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--------CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--------~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 358 (515)
+++++||+|-. ...++++++.+ ...+.++++||+++.+.... +..+.+..+..
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~---eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETR---KVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHH---HHHHHHHHhhhc
Confidence 58999999743 34555554432 13568999999995443322 22233322222
Q ss_pred --CCCEEEccCCCCC
Q 010191 359 --TVPYMIASGNHER 371 (515)
Q Consensus 359 --~vP~~~v~GNHE~ 371 (515)
...++++.||||.
T Consensus 65 ~~~~~vv~LrGNHE~ 79 (304)
T cd07421 65 HPKQRHVFLCGNHDF 79 (304)
T ss_pred ccccceEEEecCChH
Confidence 2247899999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0058 Score=60.50 Aligned_cols=169 Identities=22% Similarity=0.296 Sum_probs=95.7
Q ss_pred CEEEEcCccccCCCc-------hhHHHHHHHH----HhhhhcCCCEEEccCCCCCCCCCC---CCCCCCCCCCCcccccc
Q 010191 328 DIVFHIGDICYANGY-------ISQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNMDSGGECGVLV 393 (515)
Q Consensus 328 DfVl~~GDi~y~~g~-------~~~wd~f~~~----i~~l~~~vP~~~v~GNHE~~~~~~---g~~y~~~dsgge~g~~~ 393 (515)
=-++..||++.+.|- ..++.+|... ..++.-.+|+|+-.||||.+-... -..|. ..+..|
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR------rElrdy 201 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR------RELRDY 201 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH------HHHHHH
Confidence 346777899976542 1122222111 223334799999999999873221 01110 000011
Q ss_pred c------ceecc---CCC--CCCceEEEEEeCCEEEEEEcCCCC-cCCC-HHHHHHHHHHHhcccCCCCCEEEEEeccCC
Q 010191 394 E------NMFYV---PTE--NRAKFWYSTDYGMFRFCIADTEQD-WREG-TEQYRFIEHCLASVDRQKQPWLIFLAHRVL 460 (515)
Q Consensus 394 ~------~~f~~---P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~-~~~g-~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~ 460 (515)
. ..|.- |.. +..+--||+++|++|.+-+-+... -.++ ..-+-||+.+|.......+| ++++.|.-.
T Consensus 202 ve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGw 280 (392)
T COG5555 202 VENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGW 280 (392)
T ss_pred HHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCc
Confidence 0 01111 111 223445899999998887754321 1111 23467999999876545667 888888743
Q ss_pred -cCCCCCCCcc------CCC-----CCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 461 -GYSSDLSYAV------EGS-----FAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 461 -~yss~~~~~~------~~~-----~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
.+++..|... .++ ..++. |..|...++-|+|.-.+.||.|.+.
T Consensus 281 dtfsteawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 281 DTFSTEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred cceeccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccc
Confidence 2444444221 111 11223 7788889999999999999999864
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.034 Score=67.04 Aligned_cols=49 Identities=29% Similarity=0.327 Sum_probs=30.6
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCccccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYER 505 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~YeR 505 (515)
.+..-+|++.|..+ - ... ...+ . .+....|.++ .+||+++.||.|..-.
T Consensus 233 ~gaDvII~l~H~G~-~-~~~--~~~~--~----en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGI-E-SEY--QSSG--A----EDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCc-C-CCC--CCCC--c----chHHHHHHHhCCCCcEEEeCCCccccc
Confidence 45778999999875 2 111 0011 1 2233445544 5899999999999753
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.011 Score=57.22 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=41.3
Q ss_pred EEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-CCCEEEcc
Q 010191 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (515)
Q Consensus 290 ~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~-~vP~~~v~ 366 (515)
+++||+|.. ...+.++++.. ...|.++++||+++. |... .+....+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999732 34566666653 368999999999954 3322 122233322211 45789999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.13 Score=59.07 Aligned_cols=86 Identities=17% Similarity=0.275 Sum_probs=43.5
Q ss_pred ceEEEEEeecCCCCCCCCCccccc--ccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHH-----------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQF----------- 349 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~--~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f----------- 349 (515)
.++|+..+|+|..-.+ ...|..- ...-+..+..++++. +++ -++|..||++...-. ..+-..
T Consensus 39 ~L~IL~TnDiHg~l~~-~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl-~~~~~~~~~~~~~~~~~ 116 (780)
T PRK09418 39 NLRILETSDIHVNLMN-YDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPL-GDYVANKINDPKKPVDP 116 (780)
T ss_pred EEEEEEEeecCCCCcC-cCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchH-HHHHhhccccccccccc
Confidence 4899999999976421 1111110 111233344444432 223 488899999954322 111000
Q ss_pred --HHHHhhhhcCCCE-EEccCCCCCCC
Q 010191 350 --TAQIEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 350 --~~~i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
...+-.++..+-| ..++||||+++
T Consensus 117 ~~~~p~i~~mN~lgyDa~tlGNHEFdy 143 (780)
T PRK09418 117 SYTHPLYRLMNLMKYDVISLGNHEFNY 143 (780)
T ss_pred ccchHHHHHHhccCCCEEecccccccc
Confidence 0112223333444 57899999975
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.13 Score=50.52 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=49.7
Q ss_pred EEEEEeCC--EEEEEEcCCCCcC---C-------CHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCC
Q 010191 408 WYSTDYGM--FRFCIADTEQDWR---E-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (515)
Q Consensus 408 ~Ysfd~G~--v~fi~Ldt~~~~~---~-------g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~ 475 (515)
+..++.++ |-|+.+.+..... . .....+-+++.++++. ++...+|+..|-..-|.. ..
T Consensus 123 ~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p 192 (239)
T cd07381 123 PAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YP 192 (239)
T ss_pred cEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CC
Confidence 45567777 4555555443110 0 0111234555665553 237889999996541211 11
Q ss_pred chhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 476 ~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
... ...+...+.+.++|+++.||.|..+-
T Consensus 193 ~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 193 TPE-QRELARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred CHH-HHHHHHHHHHCCCCEEEcCCCCcCCC
Confidence 122 34566666678999999999998763
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.015 Score=46.52 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=43.4
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCC--CCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGI--NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+|..+++... ..+++.|+|...... .-..-.|+|....+... ..... .++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-----~~~~~---------------~~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD-----WQEVT---------------VPGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE-----EEEEE---------------EETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee-----eeeee---------------eeeeeeeeee
Confidence 3555555332 679999999987411 11233666655433320 01110 0112336789
Q ss_pred cCCCCCCEEEEEeceec
Q 010191 246 RELWPNAMYTYKLGHRL 262 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (515)
+||+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999999763
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.086 Score=59.37 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccCcHHHHHHHHHhc--C-CCCEEEEcCccccCCCchhHHHHHH-------HHHh
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQDL--K-NIDIVFHIGDICYANGYISQWDQFT-------AQIE 354 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~--~~~~~~~~~~l~~~~--~-~pDfVl~~GDi~y~~g~~~~wd~f~-------~~i~ 354 (515)
++++..+|+|..-.+ ...|..- ...-+..+..++++. + .--+++..||+...... ..|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~-~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMD-YDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccC-CcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 799999999975321 1001100 111223344444432 1 23488899999954322 2121110 1111
Q ss_pred hhhcCCCE-EEccCCCCCCC
Q 010191 355 PIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 355 ~l~~~vP~-~~v~GNHE~~~ 373 (515)
.++..+.| ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 22333443 57899999975
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.19 Score=49.47 Aligned_cols=64 Identities=20% Similarity=0.177 Sum_probs=38.9
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccccCC
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQW 512 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~ 512 (515)
+++.++++. .+...+|++.|--.-|.. ...+. ...+..-+.+.+||+++.||.|..+.. .+|++
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~-e~~~~ 225 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY---------EPTDE-QRELAHALIDAGADVVIGHHPHVLQPI-EIYKG 225 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC---------CCCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce-EEECC
Confidence 445555543 357889999997642211 01122 335555555678999999999998733 34443
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.22 Score=56.37 Aligned_cols=87 Identities=17% Similarity=0.239 Sum_probs=43.0
Q ss_pred CceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHH-------HH
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFT-------AQ 352 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~-------~~ 352 (515)
..++|+..+|+|..-.+ ...|.. -...-+..+..++++. +.+ -+++..||++..... ..|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~-~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMD-FDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccC-CccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcch
Confidence 35999999999975321 101110 0111223334444432 223 478899999954322 2221110 01
Q ss_pred HhhhhcCCCE-EEccCCCCCCC
Q 010191 353 IEPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 353 i~~l~~~vP~-~~v~GNHE~~~ 373 (515)
+-.+...+-| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 67899999975
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.024 Score=57.09 Aligned_cols=64 Identities=14% Similarity=0.283 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+..++||+|- ....++++++++. ..|-++++||+++.+.... +-++.+..+. -.+..
T Consensus 2 ~~YvIGDIHG---------------c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHG---------------CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccC---------------CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 4679999964 3456777777643 5789999999995443321 2223333321 13568
Q ss_pred ccCCCCC
Q 010191 365 ASGNHER 371 (515)
Q Consensus 365 v~GNHE~ 371 (515)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.045 Score=56.39 Aligned_cols=67 Identities=21% Similarity=0.167 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC---CCEEEEcCccccCCCchhHHHHHHHHHhhhhc--CCCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~vP~ 362 (515)
+++++||+|- ....+.++++...- -+-.+++||+++ +|..+ - +-+..+-.+.- .--+
T Consensus 52 ~~~vvGDiHG---------------~~~dL~~il~~~g~~~~~~~~lFLGDyVD-RG~~s-~-Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHG---------------KLDDLFLIFYKNGLPSPENPYVFNGDFVD-RGKRS-I-EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCC---------------CHHHHHHHHHHcCCCCccceEEEeccccC-CCCCc-H-HHHHHHHHHhhcCCCcE
Confidence 5899999963 34567777765422 267999999995 44322 1 11222221111 2237
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.54 Score=55.17 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=73.6
Q ss_pred cceEEEEEEeeccc--ceEEEEEecCCCCceEEEecCcccc----CCCCCCCc-ceeeecCCCCeEEEEEEeCCCCCCCc
Q 010191 125 GKGSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTF----TNPNAPVY-PRLAQGKVWNEMTVTWTSGYGINEAE 197 (515)
Q Consensus 125 g~~s~~~~l~n~r~--~~~f~~~~~~~~~~~~~a~s~~i~~----~~~~~P~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 197 (515)
-......+|-+++. +|.|.+-..+..-+ --.|..|++ .-|.+|-+ +.| .-.++++++|.|..........
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~--g~sS~~i~V~Tlsd~PsaPP~Nl~l-ev~sStsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGS--GVSSADITVRTLSDVPSAPPQNLSL-EVVSSTSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCC--CCCCCceEEEeccCCCCCCCcceEE-EecCCCeEEEEccCCCcccccc
Confidence 34455566666664 78887765422110 001222322 24555655 666 4456899999999875433222
Q ss_pred c----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceE
Q 010191 198 P----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (515)
Q Consensus 198 ~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~ 273 (515)
. .++|+..+... ....++. +|.-..-.+.+|+|+|.|.+||.....+|+.-.|++.
T Consensus 647 ~itgYkIRy~~~~~~~----~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~ 706 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSRED----EVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWV 706 (1381)
T ss_pred eEEEEEEEecccCccc----ccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccce
Confidence 2 34444332211 1111111 1111222468899999999999877667776678888
Q ss_pred EEEcC
Q 010191 274 QFKAS 278 (515)
Q Consensus 274 ~F~T~ 278 (515)
.+.|+
T Consensus 707 ~aeT~ 711 (1381)
T KOG4221|consen 707 SAETP 711 (1381)
T ss_pred eccCc
Confidence 88886
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.17 Score=51.99 Aligned_cols=181 Identities=19% Similarity=0.281 Sum_probs=93.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCc--------hhHHH---HHHHHH-
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQWD---QFTAQI- 353 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~--------~~~wd---~f~~~i- 353 (515)
.|+++-|.+|..- ....+++..+-+. ..++|++++.||+---+.. ...+. .|++..
T Consensus 1 MrIaVqGCcHG~L-----------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-----------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhH-----------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 3678888886421 0112333333221 2479999999998743321 12222 233322
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEE-----EEEeCCEEEEEEcCC---C
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWY-----STDYGMFRFCIADTE---Q 425 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y-----sfd~G~v~fi~Ldt~---~ 425 (515)
..+.+.+|.+++=||||... +......||= . ..|.|| ...+|+||+-.|+.- +
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGw---V-----------ApNIyYlG~agVv~~~gvRIggiSGI~k~~ 130 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGW---V-----------APNIYYLGYAGVVNFGGVRIGGISGIYKEH 130 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCce---e-----------ccceEEeeecceEEECCEEEeeccchhhhh
Confidence 23456789999999999741 1110011110 0 123333 467899999888753 3
Q ss_pred CcCCC--------HH-------HHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCC------CC------Cchh
Q 010191 426 DWREG--------TE-------QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG------SF------AEPM 478 (515)
Q Consensus 426 ~~~~g--------~~-------Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~------~~------~~~~ 478 (515)
++..| .. -.+.=...|.+. +.|--|+++|-=+ -.- -.|++.. .| ...+
T Consensus 131 dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP-~GI-~~yGd~~~LLr~KPFFrqeie~~~L 205 (456)
T KOG2863|consen 131 DYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQL---KHPIDIFLSHDWP-RGI-YYYGDKKQLLRLKPFFRQEIEEGKL 205 (456)
T ss_pred hcccCCCCCCCccchhhhhhhhhhhhhhHHHHhh---cCcceEEeecCCC-cch-hhcCCHHHHHhcCcHHHHHHhcCCc
Confidence 33321 00 001111233442 3455688888632 111 0112110 00 0123
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
|...++.||++-+....|+.|.|.
T Consensus 206 GSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 206 GSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred CChHHHHHHHHhCcchhhhhhHhh
Confidence 456888999999999999999996
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.08 Score=51.80 Aligned_cols=84 Identities=17% Similarity=0.285 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCC-----CCCcccccccC-cHHHHHHHHHhcCCCCEEEEcCccccCCCc--hhHHHHHHHHHhhhhc
Q 010191 287 QQVIIFGDMGKDEAD-----GSNEYNNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS 358 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~-----g~~~y~~~~~~-~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~--~~~wd~f~~~i~~l~~ 358 (515)
-+.++++|+|.+-.. |.+ .-.+|.. ....+.++++. .+|+-++..||+-.+-+. ..+|+.....++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~-lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGIN-LPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcc-cCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 468999999986421 110 0011111 12344445554 689999999999976543 3445443333343333
Q ss_pred CCCEEEccCCCCCCC
Q 010191 359 TVPYMIASGNHERDW 373 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~ 373 (515)
+ -+..+.||||-+-
T Consensus 98 ~-evi~i~GNHD~~i 111 (235)
T COG1407 98 R-EVIIIRGNHDNGI 111 (235)
T ss_pred C-cEEEEeccCCCcc
Confidence 3 5999999999763
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.1 Score=53.42 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCC--CEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~ 363 (515)
+++++||+|- ....+.++++... ..+-++++||+++ +|... -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG---------------~~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHG---------------QFYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCC---------------CHHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 4899999974 2345666666533 3488999999995 45322 12222222222223 478
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.++||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 999999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.59 Score=46.24 Aligned_cols=147 Identities=15% Similarity=0.109 Sum_probs=75.2
Q ss_pred CCCCEEEEcCccccCCCc---hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCC
Q 010191 325 KNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT 401 (515)
Q Consensus 325 ~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~ 401 (515)
.++|||+..|..+ +.|. ....+++++. .+- .++.|||=++..+--.+.+.. . ....-.++|.
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~~------GvD-viT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~ 90 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFKA------GVD-VITMGNHIWDKKEIFDFIDKE---P----RILRPANYPP 90 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHHH------T-S-EEE--TTTTSSTTHHHHHHH----S----SEE--TTS-T
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHhc------CCC-EEecCcccccCcHHHHHHhcC---C----CcEECCCCCC
Confidence 4799999999999 5554 2233333322 232 478899987643211111000 0 0001123455
Q ss_pred CCCCceEEEEEeCCEEEEEEcCC--CCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhh
Q 010191 402 ENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (515)
Q Consensus 402 ~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (515)
...+.-|..++.++.++.++|-. ....+...=..-+++.|++. +.+++.+||=+|.=. -.
T Consensus 91 ~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa-----------------TS 152 (253)
T PF13277_consen 91 GTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA-----------------TS 152 (253)
T ss_dssp T-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S------------------HH
T ss_pred CCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc-----------------HH
Confidence 55677799999999888777743 22222223344455555554 256788888888532 00
Q ss_pred HHHHHHHHHhcCCeEEEeCcccccc
Q 010191 480 RESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 480 r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
-+.-+-.+.+-+|.+|+-=|+|.--
T Consensus 153 EK~A~g~~lDGrvsaV~GTHTHVqT 177 (253)
T PF13277_consen 153 EKQAMGWYLDGRVSAVVGTHTHVQT 177 (253)
T ss_dssp HHHHHHHHHBTTBSEEEEESSSS-B
T ss_pred HHHHHHHHhCCcEEEEEeCCCCccC
Confidence 2244556677899999999999854
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.26 Score=48.90 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
+.+.++++++++. ++..++||+.|--.-|.. ...+. ...+...+.+.++|+|+.+|.|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccce
Confidence 4477888888875 568899999996431211 11223 446666666689999999999998743
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.22 Score=50.17 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=41.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
+++++||+|. ....+.++++.. ...+-++++||+++ +|... .+-+..+..+. ..--++
T Consensus 29 ~i~vvGDiHG---------------~~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s--~e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHG---------------QFDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFS--IEVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcC---------------CHHHHHHHHHHcCCCCCceEEEeCCccC-CCCCh--HHHHHHHHHHHhcCCCCEE
Confidence 5899999963 345566666543 34678999999995 44322 11222222221 123478
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999975
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.16 Score=53.34 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CC-CEEEEcCccccCCCchhHHHHHHHHHhhhhcC--CCE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~--vP~ 362 (515)
++.++||+|. ....+.++++... .. +.++++||+++ +|... -+.+..+..+.-. --+
T Consensus 67 ~i~VvGDIHG---------------~~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~S--lEvl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHG---------------QLHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWG--LETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCC---------------CHHHHHHHHHHhCCCCCCceEEEeccccC-CCCCh--HHHHHHHHHHhhccCCeE
Confidence 5899999974 3456677776532 22 35899999994 45322 1222222222212 237
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8999999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.18 Score=51.13 Aligned_cols=67 Identities=19% Similarity=0.219 Sum_probs=40.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
.+.++||+|. ....+.++++.. +..+-++++||+++ +|.... +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG---------------~~~dL~~ll~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHG---------------QFYDLLELFRVGGDPPDTNYLFLGDYVD-RGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCC---------------CHHHHHHHHHHcCCCCCCeEEEEeEECC-CCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 3889999963 234566666542 34567889999995 454321 2222222222 133589
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.64 Score=52.57 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=58.5
Q ss_pred CCCCCCc-ceeeec-CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVY-PRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~-~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
|..+|.. .+|-+. ...+++++.|.-.+..+. ..-.|+|-+++.... +|.. . ..-.
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~-------~~~~----------~----~t~~ 497 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDER-------SYST----------L----KTKT 497 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccccc-------ceeE----------E----eccc
Confidence 3344444 333333 358999999987653111 123455655543211 1110 0 0123
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.+++++||+|||.|.+||......|-..+|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5678999999999999999876556667899999999885
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.23 Score=50.61 Aligned_cols=25 Identities=20% Similarity=0.361 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.++..+++++.++++=||.-.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccc
Confidence 3578999999999999999999855
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.27 Score=52.58 Aligned_cols=83 Identities=17% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh---cCCCCEEEEcCccccCCC-c------------hhHHH
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANG-Y------------ISQWD 347 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~---~~~pDfVl~~GDi~y~~g-~------------~~~wd 347 (515)
...++++.++|.|.+. .++.. ......++++.-. ..+...++.+||+++.-| + ..|++
T Consensus 223 ~e~v~v~~isDih~GS----k~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~ 296 (481)
T COG1311 223 DERVYVALISDIHRGS----KEFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYE 296 (481)
T ss_pred CcceEEEEEeeeeccc----HHHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHH
Confidence 3458899999999864 23210 1112223333211 123578999999997432 1 24566
Q ss_pred HHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 348 QFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 348 ~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
++.+.+..+-..+-+++.|||||.-
T Consensus 297 ~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 297 ELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHhhCCCCceEEEecCCCCcc
Confidence 6666777777788899999999975
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.26 Score=50.61 Aligned_cols=23 Identities=9% Similarity=0.403 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHV 500 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~ 500 (515)
.+.+++...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.14 Score=55.09 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=36.6
Q ss_pred CceEEEEEeecCCCCCCCCCcccc-cccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN-FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~-~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g 341 (515)
..+||++..|.|.+.. +-+. ....+..++.+|+.- .++.|+|+.+|||...+.
T Consensus 12 ntirILVaTD~HlGY~----EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYG----EKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccc----cCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 4599999999998642 2111 123456677776542 368999999999997653
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.74 Score=35.89 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=24.3
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEE
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F 275 (515)
.....+.+|.|+++|.++|.....++...|+....|
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 456778999999999999987532333344443444
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=92.73 E-value=6.5 Score=46.29 Aligned_cols=194 Identities=16% Similarity=0.103 Sum_probs=107.3
Q ss_pred EcccccccCCCcccEEEEEEecC-----CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCcCCCceeEEcccCCCcccc
Q 010191 49 ASPSILGMKGQNSDWLTVEYNSP-----NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKS 123 (515)
Q Consensus 49 ~~p~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 123 (515)
.+|+=|.-.|.....++|+|... +-..-.++=.|.|..... .+...-+....==+|.|.+.+-.+|
T Consensus 718 ~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 718 VNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred cCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc--
Confidence 34555555566668899999984 334556677788875541 1110001011113567777553334
Q ss_pred ccceEEEEEEeecccceEEEEEecCCCCceEEEecCccccCCCCCCCcceeeecCCCCeEEEEEEeCCC--CCCCccEEE
Q 010191 124 TGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVE 201 (515)
Q Consensus 124 ~g~~s~~~~l~n~r~~~~f~~~~~~~~~~~~~a~s~~i~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~ 201 (515)
=.-.++++.+|.+-+=. ..++.+..|..= .-+.+|....+ ...+.++|.|.|....- .....-.|+
T Consensus 789 -tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEE
Confidence 24568888888775422 223344444221 12455666665 66678999999944321 123345788
Q ss_pred EccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 202 WGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 202 yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|....+.. ..+... +-.+..-.+.|+||+|+|.|++.|..-..-|...-|...+-.|.+.+
T Consensus 857 Y~~~~~~~--~~~~~~-----------------~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKE--GSLSRV-----------------QIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCc--ccccce-----------------eecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 87654432 001111 01234566789999999999999987643343333444444555544
Q ss_pred C
Q 010191 282 G 282 (515)
Q Consensus 282 ~ 282 (515)
.
T Consensus 918 P 918 (1051)
T KOG3513|consen 918 P 918 (1051)
T ss_pred C
Confidence 3
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.33 Score=50.03 Aligned_cols=25 Identities=8% Similarity=0.291 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.+...+++++.++++=||.=.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.35 Score=49.53 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=40.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCC--CEEE
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYMI 364 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~v--P~~~ 364 (515)
+.++||+|. ....+.++++... ..+-++++||+++ +|.... +.+..+..+.-.. -++.
T Consensus 45 i~vvGDIHG---------------~~~~L~~l~~~~~~~~~~~~lfLGDyVD-RG~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHG---------------QFYDLQALFKEGGDIPNANYIFIGDFVD-RGYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCC---------------CHHHHHHHHHhcCCCCCceEEEeeeEcC-CCCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 889999963 3455666666432 3467899999995 453221 1122222222222 3789
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.61 E-value=2.7 Score=41.33 Aligned_cols=181 Identities=17% Similarity=0.142 Sum_probs=97.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+=-.. |. ....+.+..+.++ -++|||+..|-.+ ++|.---|+.+...++. .+- +++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEec
Confidence 4899999982211 10 0112233344333 4799999999999 66665555665555543 222 5789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC--CcCC-CHHHHHHHHHHHhc
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ--DWRE-GTEQYRFIEHCLAS 443 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~--~~~~-g~~Q~~WL~~~La~ 443 (515)
|||=.+.++--.|-+..+ . ...-.++|....+.-|.-|...+..+.+.+-.- .... -..-.+=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999876432211110000 0 001123444444566777888777666665332 1111 11223335566666
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~ 507 (515)
.+ .+++.+||-+|.-- +| |. .-.-++-+-+|.+|+-=|+|.-.--+
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------EK----~a~g~yldGrvsavvGTHTHV~TaD~ 184 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------EK----NAFGWYLDGRVSAVVGTHTHVPTADE 184 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------hh----hhhheEEcCeEEEEEeccCccccccc
Confidence 44 45677888888642 11 11 11223345568999999999865433
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.37 Score=49.61 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHhcCCeEEEeCcccc
Q 010191 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 478 ~~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
.+.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999855
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=92.02 E-value=0.36 Score=49.16 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=21.5
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
+.++++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 478999999999999999999854
|
|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=89.23 E-value=3.2 Score=45.51 Aligned_cols=99 Identities=22% Similarity=0.371 Sum_probs=63.2
Q ss_pred EEEEEec---CCCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCcCCCceeEEcccCCCccccccc---eEEEEE---Ee
Q 010191 64 LTVEYNS---PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGK---GSLKLQ---LI 134 (515)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~s~~~~---l~ 134 (515)
|+..|+- ..|+..||||||=-.-+.. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 334778888643 345 3443 467785 55
Q ss_pred ec-ccceEEEEEecCCCCceEEEecCccccCCCCCCCcceeeecCC--CCeEE
Q 010191 135 NQ-RSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKV--WNEMT 184 (515)
Q Consensus 135 n~-r~~~~f~~~~~~~~~~~~~a~s~~i~~~~~~~P~~~~La~~~~--~~~m~ 184 (515)
+. =..|.|.+.... -.+.+.|.++.|..|+ |+..-+++..+ ...|-
T Consensus 84 k~~~e~YqfcYv~~~---g~V~G~S~pFqf~~~~-p~eeLvtle~e~~~~DmL 132 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQK---GEVRGASTPFQFRAPK-PLEELVTLEDEDGNSDML 132 (546)
T ss_pred CCCCCeEEEEEECCC---ccEEEecCCcccCCCC-ccccceeecccCCCcceE
Confidence 43 235788776542 2488999999998764 66655666542 34553
|
This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region []. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.13 E-value=2.8 Score=46.09 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHH-HHHHHhc-CCeE-EEeCccccc
Q 010191 431 TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL-QKLWQKY-KVDI-AVFGHVHNY 503 (515)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l-~~Ll~k~-~Vdl-vlsGH~H~Y 503 (515)
-.|.+|-.+.++. .+..-+|+++|.|. .. +. . ++.+ ..+...+ ++++ +|-||.|..
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~------~~-----e-~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RD------DD-----E-WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--cc------ch-----h-hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 3566787777766 45666899999996 21 10 1 2223 3333333 6778 999999984
|
|
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=86.17 E-value=4.9 Score=30.00 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEecee
Q 010191 240 IHTGFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
-+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4677899999999999999764
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=85.72 E-value=1.3 Score=42.36 Aligned_cols=74 Identities=15% Similarity=0.267 Sum_probs=42.7
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCch---------hHH-HHH----HH
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYI---------SQW-DQF----TA 351 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~---------~~w-d~f----~~ 351 (515)
|++++|.+.+.. ....+.+.++++.. .+|+.+|++|+++...... ... ..+ .+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888877632 11345666666532 4699999999999753221 111 112 23
Q ss_pred HHhhhhcCCCEEEccCCCCCC
Q 010191 352 QIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 352 ~i~~l~~~vP~~~v~GNHE~~ 372 (515)
.++.+...+++..++|+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 334555688999999999975
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.16 E-value=2.6 Score=42.11 Aligned_cols=64 Identities=22% Similarity=0.420 Sum_probs=42.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE---
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY--- 362 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~--- 362 (515)
-.||+.++|.|.-..+ + ++.++-|+++|+||.. +.|...+-..|-+. ..+.|+
T Consensus 61 ~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT-~~g~~~ev~~fn~~----~gslph~yK 116 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFT-NLGLPEEVIKFNEW----LGSLPHEYK 116 (305)
T ss_pred ceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCc-cccCHHHHHhhhHH----hccCcceee
Confidence 4799999999854321 1 1357889999999999 44444333344333 334554
Q ss_pred EEccCCCCCCC
Q 010191 363 MIASGNHERDW 373 (515)
Q Consensus 363 ~~v~GNHE~~~ 373 (515)
+++.||||...
T Consensus 117 IVIaGNHELtF 127 (305)
T KOG3947|consen 117 IVIAGNHELTF 127 (305)
T ss_pred EEEeeccceee
Confidence 78899999853
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 515 | ||||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-15 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 2e-15 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 2e-15 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 7e-14 |
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 515 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 2e-80 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 3e-78 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 6e-27 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-14 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-06 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 7e-05 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 256 bits (654), Expect = 2e-80
Identities = 79/355 (22%), Positives = 129/355 (36%), Gaps = 49/355 (13%)
Query: 165 NPNAPVYPRLAQGKVW-NEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGS 223
NAP + QG + ++WT+ Y A W + + +T+ +
Sbjct: 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYN 80
Query: 224 MCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283
+IH +++L + Y Y+LG ++ F P PG
Sbjct: 81 YTS-----------AFIHHCTIKDLEYDTKYYYRLGFGD------AKRQFWFVTPPKPGP 123
Query: 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
D + GD+G+ S T Q+ V +GD+ Y+N +
Sbjct: 124 DVPYVFGLIGDIGQTHD------------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWP 171
Query: 344 ----SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
++WD + E + P++ +GNHE D Y + V N +
Sbjct: 172 NHDNNRWDTWGRFSERSVAYQPWIWTAGNHEID-------YAPDIGEYQPFVPFTNRYPT 224
Query: 400 PTENRA---KFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
P E WY+ + + + + + QY++ L V+R + PWLI L
Sbjct: 225 PHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLV 284
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
H L S + Y E M R + + YKVDI GHVH+YER +
Sbjct: 285 HAPLYNSYEAHYME----GEAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSN 334
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 3e-78
Identities = 83/355 (23%), Positives = 131/355 (36%), Gaps = 50/355 (14%)
Query: 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGS 223
NAP + QG V M ++W + V + + R G ++
Sbjct: 15 GYNAPQQVHITQGDLVGRAMIISWVTMD--EPGSSAVRYWSEKNGRKRIAKGKMS----- 67
Query: 224 MCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283
G+IH +R+L N Y Y++G R + + F P G
Sbjct: 68 -----TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN------TTRRFSFITPPQTGL 116
Query: 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI 343
D + GD+G+ S T K V +GD+ YA+ Y
Sbjct: 117 DVPYTFGLIGDLGQSFD------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYP 164
Query: 344 S----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYV 399
+ +WD + E + P++ +GNHE + + + E ++V
Sbjct: 165 NHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIE-------FAPEINETEPFKPFSYRYHV 217
Query: 400 PTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
P E + + FWYS + + + GT QY +++ L V R + PWLI L
Sbjct: 218 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
H L S + + E M R + + KYKVD+ GHVH YER +
Sbjct: 278 HSPLYNSYNHHFME----GEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSN 327
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 6e-27
Identities = 42/241 (17%), Positives = 74/241 (30%), Gaps = 28/241 (11%)
Query: 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-Q 348
+ GD G + + + ++ L D + +GD Y G D +
Sbjct: 10 VAVGDWGGVPNAPFHTAR--EMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKR 66
Query: 349 FTAQIE-----PIASTVPYMIASGNHE-RDWPGTGSFYGNMDSGGECGVLV-ENMFYVPT 401
F E P VP+ + +GNH+ Y + F +P
Sbjct: 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPR 126
Query: 402 ENRAKFWYSTDYGMFRFCIAD-------TEQDWREGTEQYRFIEHCLASVDRQKQPWLIF 454
N + + D D ++ Q +I+ LA+ K+ +++
Sbjct: 127 SNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLV 183
Query: 455 LAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514
H + S A G + L L +KV + GH HN + +
Sbjct: 184 AGHYPV-----WSIAEHGP--THCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGF 236
Query: 515 V 515
V
Sbjct: 237 V 237
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 73.8 bits (180), Expect = 2e-14
Identities = 32/260 (12%), Positives = 68/260 (26%), Gaps = 51/260 (19%)
Query: 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICY---ANGYISQW 346
GD GKD Q + +Q I++ + + + G W
Sbjct: 7 ASLGDWGKD--------TKGQILNAKYFKQFIKNER-VTFIVSPGSNFIDGVKGLNDPAW 57
Query: 347 DQFTAQI---EPIASTVPYMIASGNHE--RDWPGTGSFYGNMDSGGECGVLVENMFYVPT 401
+ E +P+ G + ++ + +E
Sbjct: 58 KNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATN 117
Query: 402 ENR--------------------AKFWYSTDYGMFRFCIADT-----EQDWREGTE-QYR 435
+ + F DT +++ E +
Sbjct: 118 YPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWN 177
Query: 436 FIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495
++ L+ + ++I + + + Y+ S L L + +VD+
Sbjct: 178 DLKSQLSVAKKIA-DFIIVVGDQPI-------YSSGYSRGSSYLAYYLLPLLKDAEVDLY 229
Query: 496 VFGHVHNYERICPIYQWHHV 515
+ GH +N E I H
Sbjct: 230 ISGHDNNMEVIEDNDMAHIT 249
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 2e-08
Identities = 26/213 (12%), Positives = 63/213 (29%), Gaps = 30/213 (14%)
Query: 313 SLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPI-ASTVPYMIASGNH 369
S T + D++ D++ GD+ NG + ++ ++ + + + GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 370 ERDWPGTGSFYGNMDSGGECGVLVENMFY--------VPTENRAKFWYSTD-YGMFRFCI 420
+ + P F + + + + + Y +
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 421 ADTEQ---------DWREGT---EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY 468
DT EG +I+ A + + L H + ++ +
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVI-- 253
Query: 469 AVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501
+ + + +D ++ GH+H
Sbjct: 254 ---QKGYTINYNQQVIDALTEGAMDFSLSGHIH 283
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 48.4 bits (114), Expect = 2e-06
Identities = 38/272 (13%), Positives = 73/272 (26%), Gaps = 65/272 (23%)
Query: 298 DEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEP 355
D + + RGS + R + + + V +GDI +G+ + D ++
Sbjct: 21 DGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDGHNRRRDASDRALDT 78
Query: 356 IAST-----VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYS 410
+ + V GNHE S + + + + Y
Sbjct: 79 VMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ---RTGTDTGSDLIGDDIYAYE 135
Query: 411 -TDYGMFRFCIADT---------------------------------------------- 423
+ FRF + D
Sbjct: 136 FSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFV 195
Query: 424 EQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483
+ + +Q ++++ L D +++ LIF V ++D L
Sbjct: 196 KFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD------PICLAWNHEAVL 249
Query: 484 QKLWQKYKVDIAVFGHVHNYERICPIYQWHHV 515
L V + GH H+ R H+
Sbjct: 250 SVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHI 281
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 4e-06
Identities = 29/207 (14%), Positives = 60/207 (28%), Gaps = 47/207 (22%)
Query: 312 GSLNTTRQL---IQDLK----NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362
G+++ +L ++ L D + GD+ G + + + +EP A+
Sbjct: 45 GAVDADDRLGELLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAEL 103
Query: 363 MIASGNH-ERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIA 421
+ GNH +R + + A R +
Sbjct: 104 VWVMGNHDDRA---------ELRKF----------LLDEAPSMAPLDRVCMIDGLRIIVL 144
Query: 422 DTEQDWRE----GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEP 477
DT Q ++ LA ++ L H + A
Sbjct: 145 DTSVPGHHHGEIRASQLGWLAEELA--TPAPDGTILALHHPPI--------PSVLDMAVT 194
Query: 478 MG---RESLQKLWQKYKVDIAVFGHVH 501
+ + +L ++ + V + GH+H
Sbjct: 195 VELRDQAALGRVLRGTDVRAILAGHLH 221
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 78/534 (14%), Positives = 145/534 (27%), Gaps = 167/534 (31%)
Query: 27 QPLSK---------IAIHKAVFALDDNAYIKASPSILGMKGQNSDWLT--------VEYN 69
Q +K + + +A+ L + I G+ G W+ V+
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNV----LIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 70 SPNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPL--LCS--APIKFQYANYSS--PQYKS 123
W+ N + P V L L P +++SS
Sbjct: 180 MDFKIF--WL------NLKNCNSPET---VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 124 TGKGSLKLQLINQRSDFSFVLFTNGLL------NPKVVAVSN---KVTFTNPNAPVYPRL 174
+ + L+ L ++ + N LL N K N K+ T V L
Sbjct: 229 SIQAELRRLLKSKP-------YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281
Query: 175 AQGKVWNEMTVTWTSGYGINEAEP-FVEW-GPKGGD-----RTYSPAGTLTFGRGSMCGA 227
+ + + +E + +++ + D T +P S+
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP---RRL---SIIAE 335
Query: 228 -----PARTVGWRDPGY-----IHTGFLRELWPNAMYTY--KLGHRLFNGTYIWSSEYQF 275
A W+ I L L P +L +F
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFP----------- 382
Query: 276 KASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGD 335
++ P L +I+ D+ K + N + SL + + K I
Sbjct: 383 PSAHIPTI-LLS--LIWFDVIKSDVM--VVVNKLHKYSL-----VEKQPKESTISIP--S 430
Query: 336 ICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN 395
I Y+ ++E + ++ N + + +D
Sbjct: 431 I-----YLE----LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ---------- 471
Query: 396 MFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQY---RFIEHCLASVDRQKQPWL 452
Y +YS + + + + RF+E QK
Sbjct: 472 --Y---------FYS--HIGHHLKNIEHPERMTLFRMVFLDFRFLE--------QK---- 506
Query: 453 IFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506
+ H ++ GS +LQ+L + YK I + YER+
Sbjct: 507 --IRH------DSTAWNASGSIL-----NTLQQL-KFYKPYICD--NDPKYERL 544
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 7e-05
Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 39/218 (17%)
Query: 292 FGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTA 351
F G+ + QL + D V GDI G ++
Sbjct: 11 FRSRGEKLYGFIDVNAANAD----VVSQLNALRERPDAVVVSGDIV-NCGRPEEYQVARQ 65
Query: 352 QIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYST 411
+ + P + GNH D Y ++ + + +
Sbjct: 66 ILGSL--NYPLYLIPGNH--DDKALFLEY------------LQPLCPQLGSDANNMRCAV 109
Query: 412 DYGMFRFCIADTEQDWRE----GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS 467
D R D+ + E ++E L + +P IF+ H L
Sbjct: 110 DDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLF--EGGDKPATIFMHHPPL------- 160
Query: 468 YAVEGSFAEPMG---RESLQKLWQKYK-VDIAVFGHVH 501
+ + +P+ L L +++ + GH H
Sbjct: 161 -PLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH 197
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.92 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.89 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.84 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.83 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.82 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.73 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.41 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.35 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.18 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.09 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 98.97 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 98.94 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 98.92 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.79 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.78 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.78 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.77 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.76 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.73 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.66 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.55 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.24 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.23 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.22 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.11 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 97.98 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.97 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.93 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.91 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.87 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 97.86 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 97.84 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.69 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.66 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.6 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.57 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.37 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.32 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.26 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.25 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.24 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 97.22 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.2 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.2 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.17 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.15 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 97.1 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.09 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.08 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 97.06 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.04 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.04 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.03 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.01 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 96.99 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.98 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.98 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.97 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.95 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.95 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.94 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.92 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.85 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.82 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.81 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.78 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.76 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.75 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.75 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.74 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.73 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.71 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.68 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.68 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.65 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.62 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.61 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.57 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.53 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.51 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.47 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.43 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.37 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.34 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.33 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.32 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 96.32 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.31 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.29 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.29 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 96.28 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.28 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.28 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 96.25 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.19 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 96.18 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.18 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.16 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.11 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.1 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.1 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.04 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.99 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.96 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.88 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.88 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.88 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.81 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 95.81 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.79 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.71 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 95.68 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.65 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.62 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 95.62 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.61 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 95.59 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.59 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 95.57 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.55 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.53 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.52 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.51 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.49 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.48 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.45 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.39 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.37 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.36 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 95.36 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.33 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.33 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.32 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 95.3 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 95.29 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.27 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 95.23 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.22 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 95.22 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.1 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.09 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.04 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.0 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.96 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.89 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 94.86 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.82 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.77 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.7 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 94.56 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.49 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 94.48 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 94.34 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.29 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 94.14 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.11 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.11 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 94.06 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 93.99 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 93.69 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 93.67 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.3 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 93.22 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.2 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 93.18 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 93.17 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 93.14 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 93.12 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 93.08 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 92.98 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 92.75 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 92.63 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 92.62 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.42 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 91.93 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 91.84 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.78 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 90.85 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 90.44 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 90.07 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.97 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 89.71 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 89.34 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 89.0 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 88.68 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 88.67 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 88.67 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 88.38 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 88.35 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 88.05 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 87.12 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 86.34 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 85.44 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 85.39 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 85.2 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 84.46 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 83.73 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 83.25 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 83.2 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 82.52 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 80.04 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-51 Score=432.01 Aligned_cols=306 Identities=25% Similarity=0.417 Sum_probs=244.9
Q ss_pred CCCCCCcceeeecCC-CCeEEEEEEeC-CCCCCCccEEEEccCCCCcceecC-cceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKV-WNEMTVTWTSG-YGINEAEPFVEWGPKGGDRTYSPA-GTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~t~-~~~~~~~~~V~yg~~~~~~~~~~~-~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
++++|.|+||+++++ .++|+|+|+|. .. ++.++|+|++.++.....+. .+.+|...+ ..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEecC-----------CcCCEEE
Confidence 567899999999988 49999999998 42 46789999987665443332 223343210 2478999
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHH
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI 321 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~ 321 (515)
+|+|+||+|||+|+|||+.+ .||+.++|+|+|.+++...+||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 48999999999988777889999999998642 1245677776
Q ss_pred HhcCCCCEEEEcCccccCCCc----hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCccccccccee
Q 010191 322 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF 397 (515)
Q Consensus 322 ~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f 397 (515)
+...++|||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...++...+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 533489999999999998765 5689999999999989999999999999864210 0 0012234567778
Q ss_pred ccCCC---CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCC
Q 010191 398 YVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (515)
Q Consensus 398 ~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~ 474 (515)
.||.+ ...+.||+|++|+++||+||++.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 88863 2357899999999999999999877778999999999999988778999999999999 87654332222
Q ss_pred CchhhHHHHHHHHHhcCCeEEEeCccccccccccccCCc
Q 010191 475 AEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWH 513 (515)
Q Consensus 475 ~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~ 513 (515)
+.+ |+.|+++|.+++||++|+||+|.|+|++|+++++
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~ 336 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVA 336 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCcc
Confidence 344 9999999999999999999999999999999876
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=424.81 Aligned_cols=305 Identities=28% Similarity=0.451 Sum_probs=239.6
Q ss_pred CCCCCCcceeeecCC-CCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcc-eEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
++++|.|+||+++++ .++|+|+|+|... ++.+.|+||+.++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4678999998876554443333 3344211 24789999
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHH
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~ 322 (515)
|+|+||+|||+|+|||+.+ .||+.++|+|+|.+++...+||+++||+|... +..++++.+.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999963 37899999999988777789999999998642 12345666655
Q ss_pred hcCCCCEEEEcCccccCCCc----hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceec
Q 010191 323 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY 398 (515)
Q Consensus 323 ~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~ 398 (515)
...++||||++||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ........+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---I----NETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---G----TBCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---c----cccccchhhhhhcc
Confidence 33489999999999998653 4589999999999988999999999999864210 0 00011234566788
Q ss_pred cCCC---CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCC
Q 010191 399 VPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (515)
Q Consensus 399 ~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~ 475 (515)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+|+++|+|+ |++...+..+ .
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~---~ 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFME---G 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTT---T
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCcccccc---c
Confidence 8853 2457899999999999999999877667899999999999987777899999999999 8764322111 1
Q ss_pred chhhHHHHHHHHHhcCCeEEEeCccccccccccccCC
Q 010191 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQW 512 (515)
Q Consensus 476 ~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~ 512 (515)
+.+ |+.|+++|.+++||++|+||+|.|+|++|+++.
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~ 328 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNI 328 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECC
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCc
Confidence 334 889999999999999999999999999999763
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=303.34 Aligned_cols=246 Identities=18% Similarity=0.276 Sum_probs=175.0
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCC-CceEEEEEeecCCCCCCCCCcccccccCcHH
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQD-SLQQVIIFGDMGKDEADGSNEYNNFQRGSLN 315 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~-~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~ 315 (515)
.+++|+|.|+||+|||+|+|||+.+ ..+|++++|+|+|.+++. ..+||+++||.+... +..+
T Consensus 71 ~~~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~ 133 (527)
T 2yeq_A 71 LAHSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYT 133 (527)
T ss_dssp GTTEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCH
T ss_pred CceEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccH
Confidence 4689999999999999999999874 247899999999987653 579999999997531 1234
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCCch--------------------h----HHHHHH--HHHhhhhcCCCEEEccCCC
Q 010191 316 TTRQLIQDLKNIDIVFHIGDICYANGYI--------------------S----QWDQFT--AQIEPIASTVPYMIASGNH 369 (515)
Q Consensus 316 ~~~~l~~~~~~pDfVl~~GDi~y~~g~~--------------------~----~wd~f~--~~i~~l~~~vP~~~v~GNH 369 (515)
.+..|.+ .++|||||+||++|+++.. . .|.++. ..++.+.+.+|+|+++|||
T Consensus 134 ~~~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDH 211 (527)
T 2yeq_A 134 AYKHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDH 211 (527)
T ss_dssp HHHHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCST
T ss_pred HHHHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccc
Confidence 6666765 5899999999999987532 1 122222 2367778899999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccc-----cccccee-ccCCC-------CCCceEEEEEeCC-EEEEEEcCCCCcC-------
Q 010191 370 ERDWPGTGSFYGNMDSGGECG-----VLVENMF-YVPTE-------NRAKFWYSTDYGM-FRFCIADTEQDWR------- 428 (515)
Q Consensus 370 E~~~~~~g~~y~~~dsgge~g-----~~~~~~f-~~P~~-------~~~~~~Ysfd~G~-v~fi~Ldt~~~~~------- 428 (515)
|+..+..+........ .... ..+..+| .||.. ...+.||+|++|+ ++||+|||+....
T Consensus 212 E~~nn~~~~~~~~~~~-~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~ 290 (527)
T 2yeq_A 212 EVENNYANKIPEKGQS-VEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDG 290 (527)
T ss_dssp TTSTTCBTTBCSTTCC-HHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSS
T ss_pred cccCCCCCCcccccCC-cccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccc
Confidence 9974321110000000 0000 0122222 34432 2357899999999 9999999976321
Q ss_pred ---------------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCcc------C--CCCCchhhHHHHHH
Q 010191 429 ---------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV------E--GSFAEPMGRESLQK 485 (515)
Q Consensus 429 ---------------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~------~--~~~~~~~~r~~l~~ 485 (515)
.+.+|++||+++|++ ++++|+||++|+|+ +......+. + +.+ ...|+.|++
T Consensus 291 ~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~--~~~R~~Ll~ 364 (527)
T 2yeq_A 291 NKPPSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGY--PAQRERVIN 364 (527)
T ss_dssp EECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGS--HHHHHHHHH
T ss_pred cccccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhcc--HHHHHHHHH
Confidence 368999999999998 67899999999999 765321110 1 111 123899999
Q ss_pred HHHhcCCe--EEEeCcccccccccc
Q 010191 486 LWQKYKVD--IAVFGHVHNYERICP 508 (515)
Q Consensus 486 Ll~k~~Vd--lvlsGH~H~YeRt~p 508 (515)
+|.+++|+ ++|+||+|.|+++..
T Consensus 365 ~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 365 FIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp HHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred HHHHhCCCCEEEEEcchHHHhHhhc
Confidence 99999995 999999999998753
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-26 Score=231.92 Aligned_cols=196 Identities=18% Similarity=0.246 Sum_probs=129.1
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc----hhHHHHHHHHH-hhh--hc
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQI-EPI--AS 358 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i-~~l--~~ 358 (515)
.+||+++||+|.+.. .|....+.+.+++++ .+|||||++||++|. |. ..+|.+.++.+ +.+ ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997531 122233444455543 789999999999998 53 45565444333 222 34
Q ss_pred CCCEEEccCCCCCCCCCCC------CCCCCCCC----CCcccccccceeccCCCCCCceEEEE----Ee---------C-
Q 010191 359 TVPYMIASGNHERDWPGTG------SFYGNMDS----GGECGVLVENMFYVPTENRAKFWYST----DY---------G- 414 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~~~~g------~~y~~~ds----gge~g~~~~~~f~~P~~~~~~~~Ysf----d~---------G- 414 (515)
.+|+++++||||+..+... ..|...+. ..........||.||. .||+| .. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998632100 00100000 0000112345788874 46764 32 3
Q ss_pred ---CEEEEEEcCCCCcC----------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHH
Q 010191 415 ---MFRFCIADTEQDWR----------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRE 481 (515)
Q Consensus 415 ---~v~fi~Ldt~~~~~----------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~ 481 (515)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+ |++... +. ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~~----~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-RG----SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-CC----CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-CC----cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 887532 21 1233 88
Q ss_pred HHHHHHHhcCCeEEEeCcccccccccc
Q 010191 482 SLQKLWQKYKVDIAVFGHVHNYERICP 508 (515)
Q Consensus 482 ~l~~Ll~k~~VdlvlsGH~H~YeRt~p 508 (515)
.|++||.+|+|+++|+||+|.|+|+++
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~ 242 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED 242 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee
Confidence 999999999999999999999999876
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=210.78 Aligned_cols=196 Identities=18% Similarity=0.281 Sum_probs=128.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHH-HHHHHHhhhh-----c
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA-----S 358 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd-~f~~~i~~l~-----~ 358 (515)
..+||+++||+|......... ..+....+.+.+++++ .++||||++||++|..|....++ +|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred CceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 359999999999865321000 0011122334443433 58999999999998765322111 3344444332 2
Q ss_pred CCCEEEccCCCCCCCCCCCC-CCCCCCCCCcccccccceeccCCCCCCceEEEEEe------CCEEEEEEcCCCCc----
Q 010191 359 TVPYMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY------GMFRFCIADTEQDW---- 427 (515)
Q Consensus 359 ~vP~~~v~GNHE~~~~~~g~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~~---- 427 (515)
.+|+++++||||........ -|. ....++.+| ..||++++ ++++||+||+....
T Consensus 82 ~~p~~~v~GNHD~~~~~~~~~~~~----------~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~ 146 (313)
T 1ute_A 82 NVPWHVLAGNHDHLGNVSAQIAYS----------KISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSD 146 (313)
T ss_dssp TCCEEECCCHHHHHSCHHHHHHGG----------GTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGG
T ss_pred CCCEEEECCCCccCCCcccccccc----------ccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCc
Confidence 79999999999985211000 000 011234444 35788888 58999999986511
Q ss_pred -------------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeE
Q 010191 428 -------------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (515)
Q Consensus 428 -------------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdl 494 (515)
..+.+|++||++.|++. ..+|+|+++|+|+ ++.... +. ...+ ++.|.++|.+++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~-~~----~~~~-~~~l~~~l~~~~v~~ 216 (313)
T 1ute_A 147 DFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH-GP----THCL-VKQLLPLLTTHKVTA 216 (313)
T ss_dssp GSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS-CC----CHHH-HHHTHHHHHHTTCSE
T ss_pred cccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC-CC----cHHH-HHHHHHHHHHcCCcE
Confidence 12479999999999985 3589999999999 765431 11 1223 789999999999999
Q ss_pred EEeCcccccccccc
Q 010191 495 AVFGHVHNYERICP 508 (515)
Q Consensus 495 vlsGH~H~YeRt~p 508 (515)
+|+||+|.+++..+
T Consensus 217 ~l~GH~H~~~~~~~ 230 (313)
T 1ute_A 217 YLCGHDHNLQYLQD 230 (313)
T ss_dssp EEECSSSSEEEEEC
T ss_pred EEECChhhhhhccC
Confidence 99999999998764
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-20 Score=186.88 Aligned_cols=193 Identities=17% Similarity=0.172 Sum_probs=129.7
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc-
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~- 358 (515)
...+||++++|+|...... ..+.. ......++++++. ..++|+|+++||+++ .+....|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~--~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGA--VDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTT--BCHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3459999999999865421 11111 1123444444443 258999999999995 4455677777777777643
Q ss_pred -CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc----CCCHHH
Q 010191 359 -TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQ 433 (515)
Q Consensus 359 -~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q 433 (515)
.+|+++++||||... .+...+.-........+|+++.++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHH------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHH------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 799999999999731 001111111111245679999999999999998632 246899
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 434 YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 434 ~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
++||++.|+... ..+ +|+++|+|+ +......... ... ..++.+.+++.+++|+++|+||+|....
T Consensus 161 ~~wl~~~l~~~~--~~~-~iv~~Hh~p-~~~~~~~~~~--~~~-~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 161 LGWLAEELATPA--PDG-TILALHHPP-IPSVLDMAVT--VEL-RDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp HHHHHHHTTSCC--TTC-EEEECSSCS-SCCSSGGGGG--GSB-SCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred HHHHHHHHHhcc--cCC-eEEEEECCC-CCCCcccccc--ccc-cCHHHHHHHHhccCceEEEECCCCCccc
Confidence 999999999863 233 788888887 5442211111 111 1277899999999999999999999873
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=187.73 Aligned_cols=211 Identities=16% Similarity=0.180 Sum_probs=126.4
Q ss_pred CceEEEEEeecCCCCCCCCCccc----ccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCc-----hhHHHHHHHHH
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYN----NFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 353 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~----~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~-----~~~wd~f~~~i 353 (515)
..+||++++|+|.+...+...+. .+.......++++++.. .++|+|+++||+++.... ...++.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 35999999999997643211110 01111234455544432 689999999999965321 22333344444
Q ss_pred hhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEe-CCEEEEEEcCCCC------
Q 010191 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQD------ 426 (515)
Q Consensus 354 ~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~------ 426 (515)
+.+ .+|+++++||||........+.......... ........+|. ....||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000011232 2456899998 9999999998652
Q ss_pred ----------------------------------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCC
Q 010191 427 ----------------------------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL 466 (515)
Q Consensus 427 ----------------------------------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~ 466 (515)
.....+|++||++.|+++.++ ..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC-CCCCC
Confidence 012379999999999986422 345899999998 65432
Q ss_pred CCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCccccccccc
Q 010191 467 SYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERIC 507 (515)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt~ 507 (515)
. . ... .. .++.+.+++.++ +|+++|+||+|.+++..
T Consensus 237 ~-~--~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~ 273 (322)
T 2nxf_A 237 D-P--ICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCT 273 (322)
T ss_dssp C-G--GGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEE
T ss_pred C-c--ccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCcee
Confidence 1 0 011 11 267899999999 79999999999998764
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=178.97 Aligned_cols=192 Identities=13% Similarity=0.100 Sum_probs=125.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc----CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~----~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
+||++++|+|..... ...+.. ......++++++.+ +++|+|+++||+++. +...+|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~-~~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRG-EKLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVNC-GRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTT-CCBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS-CCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCC-cccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhc--CCCE
Confidence 489999999987532 111110 11233445544432 368999999999964 4455677777776665 6899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCC-CceEEEEEeCCEEEEEEcCCCCc----CCCHHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFI 437 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q~~WL 437 (515)
++++||||...... ..+...+ ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~~~--------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKALFL--------------EYLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHHHH--------------HHHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHHHH--------------HHhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 99999999741100 0001101 111111 23578999999999999997532 3458999999
Q ss_pred HHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 438 ~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
++.|++. +..++|+++|+|+ +........... . ..++.+.+++.++ +|+++|+||+|.++..
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~~~~~--~-~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQMDPIA--C-ENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTTGGGS--B-TTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCcccCccc--C-cCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 9999985 2356999999998 654321111101 1 1256889999998 8999999999998753
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-17 Score=171.70 Aligned_cols=216 Identities=12% Similarity=0.137 Sum_probs=127.5
Q ss_pred CCceEEEEEeecCCCCCCC---CCcccc---ccc-----CcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHH
Q 010191 284 DSLQQVIIFGDMGKDEADG---SNEYNN---FQR-----GSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 350 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g---~~~y~~---~~~-----~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~ 350 (515)
+..+||++++|+|.+.... ...+.. +.. .....++++++. ..+||+|+++||+++. +....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3459999999999864210 000000 000 023344555443 2579999999999954 4445566666
Q ss_pred HHHhhhhc-CCCEEEccCCCCCCCCCCCCCCCCCC---CCCcccccccceeccCC-------CCCCceEEEEEeCCEEEE
Q 010191 351 AQIEPIAS-TVPYMIASGNHERDWPGTGSFYGNMD---SGGECGVLVENMFYVPT-------ENRAKFWYSTDYGMFRFC 419 (515)
Q Consensus 351 ~~i~~l~~-~vP~~~v~GNHE~~~~~~g~~y~~~d---sgge~g~~~~~~f~~P~-------~~~~~~~Ysfd~G~v~fi 419 (515)
+.++.+.. .+|+++++||||........ +.... ........+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 66666643 78999999999986322110 00000 00000000111111000 001234455568899999
Q ss_pred EEcCCCC------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHH
Q 010191 420 IADTEQD------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW 487 (515)
Q Consensus 420 ~Ldt~~~------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll 487 (515)
+||+... .....+|++||++.|+.+... ...+|+++|+|+ +....... ...... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~-~~~~~~~~--~~~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNL-TDHNDVIQ--KGYTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBS-SCSSCC----CCSBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCC-cccccccc--cccccc-cHHHHHHHH
Confidence 9999742 124579999999999886432 345899999998 65422111 111111 277899999
Q ss_pred HhcCCeEEEeCcccccccc
Q 010191 488 QKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 488 ~k~~VdlvlsGH~H~YeRt 506 (515)
.+++|+++|+||+|.....
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999998753
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.7e-12 Score=122.27 Aligned_cols=172 Identities=12% Similarity=0.101 Sum_probs=98.0
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.+||+++||+|.+. ..++++++.. .++|+|+++||+++......++.++++.++.+ .+|++
T Consensus 5 ~mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEE
T ss_pred eEEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEE
Confidence 37999999999642 2233443332 38999999999996542444455555555543 68999
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC-CCCceEEEEEeC-CEEEEEEcCCC--CcCCC--------H
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE-NRAKFWYSTDYG-MFRFCIADTEQ--DWREG--------T 431 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~~Ysfd~G-~v~fi~Ldt~~--~~~~g--------~ 431 (515)
+++||||.... .+.. ..+......|.. ...+ ..+.++ +++|+.++... .+... .
T Consensus 68 ~v~GNHD~~~~---~~~~---------~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T 1uf3_A 68 YVPGPQDAPIW---EYLR---------EAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 133 (228)
T ss_dssp EECCTTSCSHH---HHHH---------HHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEH
T ss_pred EECCCCCchhH---HHHH---------hhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchh
Confidence 99999997410 0000 000000000100 0001 124455 78888887432 11111 2
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccc
Q 010191 432 EQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (515)
Q Consensus 432 ~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H 501 (515)
.+.+|+++.|++.. ..+.|++.|+|+ +..... ..+.+.+..++.+++++++++||+|
T Consensus 134 ~~~~~~~~~l~~~~---~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 134 WVAEYRLKALWELK---DYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHHGGGGGSC---SCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hhHHHHHHHHHhCC---CCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 23344455565542 225899999998 543110 0113467778888999999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.35 E-value=5.1e-12 Score=123.34 Aligned_cols=183 Identities=12% Similarity=0.127 Sum_probs=95.7
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhH--------------------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ-------------------- 345 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~-------------------- 345 (515)
.+||+++||+|.+.. ....+-+.++. .++|+|+++||+++.......
T Consensus 5 ~mri~~iSDlH~~~~------------~~~~~l~~~~~-~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD------------LLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CCEEEEEECCTTCGG------------GHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred eEEEEEEeecCCChH------------HHHHHHHHHHh-cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHH
Confidence 379999999997531 22222222222 589999999999954321100
Q ss_pred ---HHHHHHHHhhhhc-CCCEEEccCCCCCCCCCC-CCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEE
Q 010191 346 ---WDQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (515)
Q Consensus 346 ---wd~f~~~i~~l~~-~vP~~~v~GNHE~~~~~~-g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 420 (515)
.+.+.+.++.+.. .+|+++++||||...... ...+. +.+. +.....+ .+ -..+++++++|+.
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~------~~~~-~~~~~~l-----~~-~~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE------AETA-YPNIRVL-----HE-GFAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH------TTTT-CTTEEEC-----SS-EEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh------hccC-CcceEEe-----cC-cceEEECCEEEEe
Confidence 0223333444433 689999999999741000 00000 0000 0000000 01 1237788999999
Q ss_pred EcCCCCc-CCCHHHH----HHHH----HHHhcccCCCCCEEEEEeccCCcCCCC-CCCccCCCCCchhhHHHHHHHHHhc
Q 010191 421 ADTEQDW-REGTEQY----RFIE----HCLASVDRQKQPWLIFLAHRVLGYSSD-LSYAVEGSFAEPMGRESLQKLWQKY 490 (515)
Q Consensus 421 Ldt~~~~-~~g~~Q~----~WL~----~~La~~~r~~~pwiIv~~H~P~~yss~-~~~~~~~~~~~~~~r~~l~~Ll~k~ 490 (515)
++..... ....+|. .|+. +.|++. .+. ..|++.|+|+ +... ....... ...+.+.+..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~-~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL--KPR-RLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS--CCC-EEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc--CCC-CEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9753210 0011222 1433 333432 123 3688999998 5431 1100000 011245778888899
Q ss_pred CCeEEEeCccc
Q 010191 491 KVDIAVFGHVH 501 (515)
Q Consensus 491 ~VdlvlsGH~H 501 (515)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.18 E-value=3.2e-11 Score=123.07 Aligned_cols=205 Identities=13% Similarity=0.109 Sum_probs=98.8
Q ss_pred CceEEEEEeecCCCCCC--CCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCc-cccCCCch--hHHHHHHHHHhhhh
Q 010191 285 SLQQVIIFGDMGKDEAD--GSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGD-ICYANGYI--SQWDQFTAQIEPIA 357 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~--g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GD-i~y~~g~~--~~wd~f~~~i~~l~ 357 (515)
..+||++++|+|.+... ........ ......++++++. ..++|+|+++|| ++ +.+.. .....+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~-~~~~~~l~~lv~~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRR-EELKKALDKVVEEAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECH-HHHHHHHHHHHHHHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChh-HHHHHHHHHHHHHHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH
Confidence 35999999999986210 00000000 0112345555443 258999999999 66 44432 22344555666554
Q ss_pred cCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc-------CCC
Q 010191 358 STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW-------REG 430 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-------~~g 430 (515)
..+|+++++||||... . ..+. +........+.+..+......+.++.+++.|+.++..... ...
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~~~------~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~ 165 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KLFG------NFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDF 165 (336)
T ss_dssp HHSCEEECCC-------C--HHHH------HHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHH
T ss_pred hcCCEEEECCCCCccc-c--ccHH------HHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHH
Confidence 3389999999999852 1 0000 0000000001111111000011223456888888643221 112
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 431 TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.+|.+|+.+.|...-+....+.|+++|.|+ +..... ..+..... ..+...+.+.++|++++||+|..+..
T Consensus 166 ~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 166 RFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEe
Confidence 467889888886521013457999999997 532110 00000000 00111234568999999999998753
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.2e-10 Score=112.04 Aligned_cols=186 Identities=16% Similarity=0.150 Sum_probs=98.6
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
....||++++|+|.... . + +..++|+||++||+++ .|...+.+.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~-----------~----l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTD-----------G----I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCT-----------T----C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcc-----------h----h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 34589999999997531 0 1 2368999999999995 444555566666666542 34689
Q ss_pred EccCCCCCCCCCCCCCCCCC---CC-------CCcccccccceeccCCCC--CCceEEEEEeCCEEEEEEcCCCCcCCC-
Q 010191 364 IASGNHERDWPGTGSFYGNM---DS-------GGECGVLVENMFYVPTEN--RAKFWYSTDYGMFRFCIADTEQDWREG- 430 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~---ds-------gge~g~~~~~~f~~P~~~--~~~~~Ysfd~G~v~fi~Ldt~~~~~~g- 430 (515)
+++||||..... .++... +. ..... .+...-.++.+. -.+ -+..+++++|+...-...+...
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~ 189 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPE-DFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWG 189 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHH-HHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccc-hhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcC
Confidence 999999984211 111000 00 00000 000000001100 001 1456778998884422211111
Q ss_pred --HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHH-HhcCCeEEEeCccccc
Q 010191 431 --TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW-QKYKVDIAVFGHVHNY 503 (515)
Q Consensus 431 --~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll-~k~~VdlvlsGH~H~Y 503 (515)
.++.+++.+.+.... ....|++.|.|+ |......... ....+.+.|..++ ++++.+++++||+|..
T Consensus 190 f~~~~~~~~~~~~~~ip---~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~ 258 (296)
T 3rl5_A 190 FNLPRGQSLLDKWNLIP---EGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEG 258 (296)
T ss_dssp TBCCTTHHHHHHHTTSC---TTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGG
T ss_pred CCcchHHHHHHHHhhCC---CCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCC
Confidence 122224444444432 223689999998 7643211000 0122345666666 6899999999999975
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=98.97 E-value=6.6e-10 Score=108.17 Aligned_cols=169 Identities=7% Similarity=-0.010 Sum_probs=87.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc-----C--CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-----K--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~-----~--~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
.|++++||+|... ..++++++.. . ++|+|+++||++..+.... +..+.++.+...
T Consensus 2 m~i~~isD~H~~~---------------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~ 63 (252)
T 1nnw_A 2 VYVAVLANIAGNL---------------PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKK 63 (252)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHH
T ss_pred cEEEEEeecCCCH---------------HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhh
Confidence 4899999998531 2233333322 2 7999999999995432222 233444444333
Q ss_pred CCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCC--CCcCCCHHHHHHH
Q 010191 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFI 437 (515)
Q Consensus 360 vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~g~~Q~~WL 437 (515)
.|+++++||||........ .++ .+..... ++..... .... .......+|++||
T Consensus 64 ~~~~~v~GNhD~~~~~~~~---------~~~-~~~~~~~------------~~~~~~~---~~~~~~~~~~l~~~~~~~L 118 (252)
T 1nnw_A 64 ENVKIIRGKYDQIIAMSDP---------HAT-DPGYIDK------------LELPGHV---KKALKFTWEKLGHEGREYL 118 (252)
T ss_dssp SCEEEECCHHHHHHHHSCT---------TCS-SSGGGGG------------SSCCHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred cCeeEEecchHHHhhcccc---------ccC-Ccccccc------------hhhhHHH---HHHHHHHHHHCCHHHHHHH
Confidence 6899999999974210000 000 0000000 0000000 0000 0001235788998
Q ss_pred HHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccc
Q 010191 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYE 504 (515)
Q Consensus 438 ~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~Ye 504 (515)
++.............|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|...
T Consensus 119 ~~lp~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~ 180 (252)
T 1nnw_A 119 RDLPIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPV 180 (252)
T ss_dssp HTSCSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEE
T ss_pred HhCCceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccc
Confidence 76433221111224677888876 33211000 0 111146788888888 99999999999864
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1e-08 Score=106.65 Aligned_cols=185 Identities=14% Similarity=0.083 Sum_probs=96.5
Q ss_pred CCceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhhhhc
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS 358 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l~~ 358 (515)
...+||++++|+|.+... +.. -.......++++++. ..++|+|+++||+++.... ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 345899999999987421 100 000112345555543 2689999999999854422 2344556677777654
Q ss_pred -CCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHH
Q 010191 359 -TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFI 437 (515)
Q Consensus 359 -~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL 437 (515)
.+|+++++||||.......... .+ .+......-.+ ..++..+-+++.++.++...... ..+..+||
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~~------~~---~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l 160 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEESP------LA---LLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKL 160 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCCG------GG---GGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccccCH------HH---HHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHH
Confidence 5899999999998532110000 00 00000110010 11221222458888888654321 12223333
Q ss_pred ---HHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 438 ---EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 438 ---~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
...+. ...+.|+++|.|+ ..... +...... .. + .++|++++||+|...
T Consensus 161 ~~l~~~~~-----~~~~~Ill~H~~~-~~~~~-----~~~~~~~--~~----l--~~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 161 KNFESEAK-----NYKKKILMLHQGI-NPYIP-----LDYELEH--FD----L--PKFSYYALGHIHKRI 211 (386)
T ss_dssp HHHHHHHH-----TCSSEEEEECCCC-TTTSS-----SSCSSCG--GG----S--CCCSEEEECSCCSCE
T ss_pred HHhhhhcc-----cCCCEEEEECcCc-cccCC-----CCcccCH--HH----h--hhCCeEEccCCCCCc
Confidence 33322 1234899999987 32111 1110111 11 1 139999999999874
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=113.59 Aligned_cols=198 Identities=13% Similarity=0.212 Sum_probs=101.1
Q ss_pred eEEEEEeecCCCCCCCCCcccc-cccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC--chhHHHHHHHHHhhhhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNN-FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~-~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g--~~~~wd~f~~~i~~l~~~vP 361 (515)
+||++++|+|.+.......+.. ........++++++. ..++|+|+++||+.++.+ ....++.+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 4899999999875310000000 001112344554432 258999999999994332 23345555666666654499
Q ss_pred EEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC----CCCceEEEEE--eC-CEEEEEEcCCCCcC----CC
Q 010191 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE----NRAKFWYSTD--YG-MFRFCIADTEQDWR----EG 430 (515)
Q Consensus 362 ~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~----~~~~~~Ysfd--~G-~v~fi~Ldt~~~~~----~g 430 (515)
+++++||||.... ..+. .. . ..++.+ ..... +.+. .| .+.++.+.-..... .+
T Consensus 81 v~~i~GNHD~~~~---~~~~---------~~-~--~~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~~ 144 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFG---------NF-V--TSISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALRKNE 144 (379)
T ss_dssp EEECCCTTSCTTH---HHHH---------HH-H--HTTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----CHH
T ss_pred EEEEcCCCccccC---cccc---------cc-c--cccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhhhhc
Confidence 9999999995310 0000 00 0 000000 00001 1222 23 36677665432111 13
Q ss_pred HHHHHHHHHHHhcc---cCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 431 TEQYRFIEHCLASV---DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 431 ~~Q~~WL~~~La~~---~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
.++.+|+.+.|+.. ......+.|+++|.++ .......+.+.... ..+...+...++|+++.||.|..+..
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 57789999988721 1123456899999987 32211001111000 01111222468999999999998643
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=5.6e-09 Score=101.66 Aligned_cols=151 Identities=16% Similarity=0.239 Sum_probs=86.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+|.. ...+.+++++..++|.++++||++....... +..+.+..+. +++++.
T Consensus 4 mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~~---~~~~~l~~~~---~~~~v~ 62 (246)
T 3rqz_A 4 MRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGYGPRPR---ECVELVRVLA---PNISVI 62 (246)
T ss_dssp CCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSSSSCHH---HHHHHHHHHC---SSEECC
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCCCCCHH---HHHHHHHhcC---CCEEEe
Confidence 789999999832 2456666666568999999999995433222 3333444332 268999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhcccC
Q 010191 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (515)
Q Consensus 367 GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~~~r 446 (515)
||||...... +... .+. ........|. ......++.+||++.......
T Consensus 63 GNhD~~~~~~---~~~~------------~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~~ 110 (246)
T 3rqz_A 63 GNHDWACIGR---LSLD------------EFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMID 110 (246)
T ss_dssp CHHHHHHTCC---CCCC--------------C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEEE
T ss_pred CchHHHHhcc---CCcc------------ccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEEE
Confidence 9999742110 0000 000 0000000000 012346889999865443321
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
. .|++.|.++ .+... ..... ...+..+|.+++++++|+||+|.-
T Consensus 111 --~--~i~~~Hg~p-~~~~~-----~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 111 --G--DWTVVHGSP-RHPIW-----EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp --T--TEEEESSCS-SSTTT-----CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred --C--CEEEEECCc-CCccc-----cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 1 467778776 43210 11111 457788899999999999999964
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.78 E-value=3.9e-08 Score=92.05 Aligned_cols=66 Identities=14% Similarity=0.300 Sum_probs=43.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+|..... ....+.+.+++++ .++|+|+++||++. ...++.++.+ ..|+++++
T Consensus 11 m~i~~iSD~H~~~~~---------~~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v~ 70 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRC---------NSLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 70 (192)
T ss_dssp CEEEEECCCCBTTTC---------SSCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred eEEEEEecCCCCccc---------hhHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEEc
Confidence 799999999975321 0112334444332 56999999999983 2233444443 35899999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 71 GNhD~~ 76 (192)
T 1z2w_A 71 GDFDEN 76 (192)
T ss_dssp CTTCCC
T ss_pred CCcCcc
Confidence 999974
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=96.78 Aligned_cols=67 Identities=21% Similarity=0.383 Sum_probs=45.2
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
..|+++++|+|.+.... ...+.+.++++ ..++|+|+++||++. .+.++.++.+ ..|++++
T Consensus 25 ~m~i~~iSD~H~~~~~~---------~l~~~l~~~~~-~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK---------ELPSNFRELLA-TDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS---------SCCGGGHHHHH-CTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH---------HHHHHHHHHHh-cCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 47999999999754210 01123444544 267999999999984 2334444444 4689999
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
+||||..
T Consensus 85 ~GNHD~~ 91 (215)
T 2a22_A 85 SGDLDSA 91 (215)
T ss_dssp CCTTCCS
T ss_pred cCCCcCc
Confidence 9999975
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.3e-08 Score=95.52 Aligned_cols=149 Identities=17% Similarity=0.251 Sum_probs=83.3
Q ss_pred eEEEEEeecCCCCCCCC--CcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGS--NEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~--~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
+|+++++|+|.+..... ..+..+ ....+.+.+.+++ ..++|+|+++||+++.. ..+....+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRF-KGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCC-TTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCH-HHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCEE
Confidence 57999999997642100 001000 1112222233332 25799999999999653 1223344444444 35899
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
+++||||.... .+. ..|-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~---------------------~~~-------~~~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE---------------------SLK-------EYFDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH---------------------HHT-------TTCSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh---------------------hhh-------hhhhc----------hh----------HHHHHH----h
Confidence 99999997410 000 00100 00 111221 1
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
. ..+.|++.|.|+ +..... .+ ....+.+..++.+++++++++||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 234799999987 543211 11 12367888999999999999999998754
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.76 E-value=6.3e-08 Score=89.28 Aligned_cols=57 Identities=23% Similarity=0.298 Sum_probs=40.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC-CCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~-~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++++
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999832 234555655543 79999999998421 2233332 89999
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
.||||..
T Consensus 58 ~GNhD~~ 64 (176)
T 3ck2_A 58 KGNMDFY 64 (176)
T ss_dssp CCTTCCS
T ss_pred cCcccch
Confidence 9999974
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-07 Score=96.59 Aligned_cols=82 Identities=13% Similarity=0.248 Sum_probs=52.8
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHHHhhhhc-CC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 360 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~--~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~~-~v 360 (515)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 489999999987421 1000 00011334444432 268999999999996432 22345566667777654 69
Q ss_pred CEEEccCCCCCC
Q 010191 361 PYMIASGNHERD 372 (515)
Q Consensus 361 P~~~v~GNHE~~ 372 (515)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.66 E-value=8.4e-08 Score=89.93 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=42.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+|++++||+|.. ...++++++.. .++|+|+++||++.. +.++.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999832 12334444332 689999999999841 233444433 579999
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=4.8e-08 Score=96.72 Aligned_cols=164 Identities=15% Similarity=0.155 Sum_probs=86.4
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
..|++++||+|.+ ...+++++++. .++|.|+++||++..+... .+..+.++.+ -|++
T Consensus 11 ~~~i~~iSDiHg~---------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGN---------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCC---------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEE
Confidence 3899999999843 23344444432 4799999999999543322 2334444433 4789
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCcCCCHHHHHHHHHHHhc
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~~WL~~~La~ 443 (515)
++.||||...... . . +.++ +..|. ..+.+ . ...........++++||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~---~--~~~~------~~~~~----~~~~~-~--------~~~~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---V---R--KELD------STRPS----QRYLL-R--------QCQYVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---H---T--TCSC------TTSHH----HHHHH-H--------HHHHHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---h---c--cccC------CCcHH----HHHHH-H--------HHHHHHHHcCHHHHHHHHhCCCc
Confidence 9999999741100 0 0 0000 00000 00000 0 00000012357889998864433
Q ss_pred ccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 444 ~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
....-....|++.|..+ .+. + +. .-..... .+.+..++.+.++|++|+||+|.-
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~--~-~~-~~~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~ 176 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKN--W-GR-ELIHTGK-QEEFDRLVTHPPCDIAVYGHIHQQ 176 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBS--S-SS-TTSTTCC-HHHHHHTTTTTTCSEEECCSSCSE
T ss_pred eEEEECCcEEEEEECCC-CCC--C-Cc-eecCCCc-HHHHHHHhcccCCCEEEECCcCch
Confidence 21111234677788654 221 1 00 0000111 557788888889999999999953
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.24 E-value=8.1e-06 Score=75.51 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+|.... . ....+.++++. .++|+|+++||+++. +..+.++.+ ..|++++.
T Consensus 23 mri~~iSD~Hg~~~-----~----~~l~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----M----ASLPDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----T----CCCCHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----H----HHHHHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0 11112333332 579999999999841 233444443 36999999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999973
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.23 E-value=5.6e-06 Score=89.98 Aligned_cols=189 Identities=15% Similarity=0.071 Sum_probs=90.6
Q ss_pred CceEEEEEeecCCCCCCCCCcccc-cc---cCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchh--HHHHHHHHHhh
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN-FQ---RGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 355 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~-~~---~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~--~wd~f~~~i~~ 355 (515)
..++|++++|+|..... . .|.. .. .+....+..++++. .++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~-~-~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEP-V-ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSC-E-EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCccc-c-cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 35999999999964211 0 1100 00 01223333333321 3577 8999999995332111 11222233332
Q ss_pred hhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccc-eeccCCC----CCCceEEEEEeCC--EEEEEEcCCCC--
Q 010191 356 IASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPTE----NRAKFWYSTDYGM--FRFCIADTEQD-- 426 (515)
Q Consensus 356 l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~-~f~~P~~----~~~~~~Ysfd~G~--v~fi~Ldt~~~-- 426 (515)
+ . +-++++||||+++... .+.... .+.+.++.. ....... ...+.|.-++.++ +-|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~-~l~~~l---~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~ 178 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPG-PLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 178 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHH-HHHHHH---TTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred c--C-CCccccccccccCCHH-HHHHHH---hhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhh
Confidence 2 2 3367899999974210 000000 011111111 0000000 0123466678887 55666665421
Q ss_pred ---------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 010191 427 ---------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (515)
Q Consensus 427 ---------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 496 (515)
+....++.+...+.|++ .+...+|++.|.|. . .+ ..+..+ .+||++|
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~-----------------~d--~~la~~~~gvDlIl 235 (552)
T 2z1a_A 179 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-G-----------------ED--LKLARRLVGVQVIV 235 (552)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-H-----------------HH--HHHHTTCSSCCEEE
T ss_pred ccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-c-----------------hH--HHHHHhCCCccEEE
Confidence 00112333333344543 24556999999885 1 00 112233 5899999
Q ss_pred eCccccccc
Q 010191 497 FGHVHNYER 505 (515)
Q Consensus 497 sGH~H~YeR 505 (515)
+||.|...-
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998654
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.22 E-value=3.7e-06 Score=90.63 Aligned_cols=200 Identities=14% Similarity=0.067 Sum_probs=90.8
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcH-HHHHHHHHhc--CCC-CEEEEcCccccCCCch--hHHHHHHHHHhhhhcC
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 359 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~-~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~--~~wd~f~~~i~~l~~~ 359 (515)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||+....... ...+...+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 000000011 1233332221 145 7999999998432111 1112333344443 2
Q ss_pred CCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccc-eeccCCCC--CCceEEEEEeCC--EEEEEEcCCCC--cC-C--
Q 010191 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPTEN--RAKFWYSTDYGM--FRFCIADTEQD--WR-E-- 429 (515)
Q Consensus 360 vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~-~f~~P~~~--~~~~~Ysfd~G~--v~fi~Ldt~~~--~~-~-- 429 (515)
. -++++||||+++... .+... ..+.+.++.. .......+ ..+.|.-++.++ +-|+.+.+... +. +
T Consensus 84 ~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 Y-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp C-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred C-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 3 367899999964210 00000 0000011100 00000000 013355677887 55666665431 11 1
Q ss_pred --------CHHH-HHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcc
Q 010191 430 --------GTEQ-YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHV 500 (515)
Q Consensus 430 --------g~~Q-~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~ 500 (515)
..++ .+|+++ |++. .+...+|++.|.|. +.... .+.. ... ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~-~~~~--~~~---~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE-HGSN--APG---DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC-CTTS--CCC---HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc-cccc--Cch---HHHHHHhCCCCceeEEECCCC
Confidence 0122 233333 4321 24567999999997 32211 1100 001 223444444456999999999
Q ss_pred cccc
Q 010191 501 HNYE 504 (515)
Q Consensus 501 H~Ye 504 (515)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.11 E-value=6.5e-05 Score=81.12 Aligned_cols=205 Identities=12% Similarity=0.110 Sum_probs=91.3
Q ss_pred CceEEEEEeecCCCCCCCCCcccc---cccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHH--------HHHH
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW--------DQFT 350 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~---~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~w--------d~f~ 350 (515)
..++|+.++|+|..-.. ..|.. -..+-...+..++++. ++++ +++.+||++.... ...+ ....
T Consensus 18 ~~l~Il~tnD~Hg~~~~--~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFP--TDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSS--CCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccC--cccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 35999999999954321 01100 0112233444444432 3455 7788999995321 1111 2222
Q ss_pred HHHhhhhcCCCEEEccCCCCCCCCCCC--CCCCCCCCCCccccccc-ceeccCCC-CCCceEEEEEeCC--EEEEEEcCC
Q 010191 351 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNMDSGGECGVLVE-NMFYVPTE-NRAKFWYSTDYGM--FRFCIADTE 424 (515)
Q Consensus 351 ~~i~~l~~~vP~~~v~GNHE~~~~~~g--~~y~~~dsgge~g~~~~-~~f~~P~~-~~~~~~Ysfd~G~--v~fi~Ldt~ 424 (515)
+.+..+ ... ++++||||+++...+ .++. ++..++. ......+. ...+.|.-++.++ +-||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 233322 333 567999998742100 0000 0000110 00000000 0012356678887 556666654
Q ss_pred CC--cCC-----C---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeE
Q 010191 425 QD--WRE-----G---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (515)
Q Consensus 425 ~~--~~~-----g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdl 494 (515)
.. +.. + ....+.+++.+++.. .+...+|++.|.+...........+....+.. ...+..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 31 110 0 122344444444432 34567999999875221100000000001111 11232222 258999
Q ss_pred EEeCcccccc
Q 010191 495 AVFGHVHNYE 504 (515)
Q Consensus 495 vlsGH~H~Ye 504 (515)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999865
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=83.62 Aligned_cols=87 Identities=11% Similarity=0.188 Sum_probs=55.5
Q ss_pred CCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhhh---
Q 010191 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 356 (515)
Q Consensus 283 ~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~l--- 356 (515)
....+||++++|+|.+....... ........++++++. ..++|+|+++||+++.... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999976421110 011122344554432 2689999999999965432 23444555555543
Q ss_pred -------------------------------hcCCCEEEccCCCCCC
Q 010191 357 -------------------------------ASTVPYMIASGNHERD 372 (515)
Q Consensus 357 -------------------------------~~~vP~~~v~GNHE~~ 372 (515)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 1379999999999974
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=6.5e-05 Score=80.77 Aligned_cols=207 Identities=14% Similarity=0.102 Sum_probs=90.5
Q ss_pred ceEEEEEeecCCCCCCCCCcccc---cccCcHHHHHHHHHh--cCCCCEEEE-cCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~---~~~~~~~~~~~l~~~--~~~pDfVl~-~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
.++|+.++|+|..-......|.. -..+....+..++++ .++++.+++ +||++.. ............++.+..-
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g-~~~~~~~~g~~~~~~ln~l 84 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTG-PYISSLTKGKAIIDIMNTM 84 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSS-SHHHHTTTTHHHHHHHTTS
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCC-chhhhhcCChHHHHHHHhc
Confidence 48999999999543210000100 011223344444433 146776665 9999953 2111111111122222222
Q ss_pred CCEEEccCCCCCCCCCCC--CCCCCCCCCCccccccc-ceeccCCCC-C--CceEEEEEeCC--EEEEEEcCCC-----C
Q 010191 360 VPYMIASGNHERDWPGTG--SFYGNMDSGGECGVLVE-NMFYVPTEN-R--AKFWYSTDYGM--FRFCIADTEQ-----D 426 (515)
Q Consensus 360 vP~~~v~GNHE~~~~~~g--~~y~~~dsgge~g~~~~-~~f~~P~~~-~--~~~~Ysfd~G~--v~fi~Ldt~~-----~ 426 (515)
-+-++++||||+++.... .++. +++.|+. ........+ . .+.|.-++.++ +-|+.+.+.. .
T Consensus 85 g~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~ 158 (509)
T 3ive_A 85 PFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTV 158 (509)
T ss_dssp CCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHS
T ss_pred CCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccccc
Confidence 234677899998742100 0000 0111110 000000000 0 23355678888 4556664321 0
Q ss_pred c---CCC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCc
Q 010191 427 W---REG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGH 499 (515)
Q Consensus 427 ~---~~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH 499 (515)
+ ..+ ....+.+++.+++.... ...+|++.|.+..+..... ......... . .-..+.++ .+||++|+||
T Consensus 159 ~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~--~~~~~~~~~-~-~d~~la~~~~giDlIlgGH 233 (509)
T 3ive_A 159 SAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSM--GGTDVRRAL-D-KDIQTASQVKGLDILITGH 233 (509)
T ss_dssp CGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC-----CCCCCC-H-HHHHHHHHCSSCCEEEEES
T ss_pred ccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccc--ccccccccc-c-hHHHHHhcCCCCcEEEeCC
Confidence 0 011 22334455555544323 6779999998752222111 000000000 0 11223333 4799999999
Q ss_pred ccccc
Q 010191 500 VHNYE 504 (515)
Q Consensus 500 ~H~Ye 504 (515)
.|...
T Consensus 234 tH~~~ 238 (509)
T 3ive_A 234 AHVGT 238 (509)
T ss_dssp SCCCC
T ss_pred cCccC
Confidence 99743
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2e-05 Score=86.13 Aligned_cols=193 Identities=16% Similarity=0.118 Sum_probs=89.3
Q ss_pred CCceEEEEEeecCCCCCCCCCccc------ccccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCch--hHHHHHHHH
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYN------NFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 352 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~------~~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~--~~wd~f~~~ 352 (515)
.-.++|+.++|+|..-......|. ....+-...+..++++. ++++ +++.+||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 00011233334333321 2455 899999999543211 111222333
Q ss_pred HhhhhcCCCEEEccCCCCCCCCCCC--CCCCCCCCCCccccccc-ceeccCCC----CCCceEEEEEeCC--EEEEEEcC
Q 010191 353 IEPIASTVPYMIASGNHERDWPGTG--SFYGNMDSGGECGVLVE-NMFYVPTE----NRAKFWYSTDYGM--FRFCIADT 423 (515)
Q Consensus 353 i~~l~~~vP~~~v~GNHE~~~~~~g--~~y~~~dsgge~g~~~~-~~f~~P~~----~~~~~~Ysfd~G~--v~fi~Ldt 423 (515)
+..+ ..- ++++||||+++.... .++. +++.|+. ........ ..-+.|--++.++ |-||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3332 233 567999998742100 0000 0111111 00000000 0112455678887 55666644
Q ss_pred -CC-----CcCCC---HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeE
Q 010191 424 -EQ-----DWREG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (515)
Q Consensus 424 -~~-----~~~~g---~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdl 494 (515)
.. ....+ ....+-+++.+++........+|++.|.+. . . ...+...+ .+||+
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~--~-------------~--d~~la~~~--~giDl 221 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS--E-------------K--NIEIAQKV--NDIDV 221 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH--H-------------H--HHHHHHHC--SSCCE
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc--h-------------h--hHHHHHhC--CCCCE
Confidence 11 00011 122334455544443234567999999774 0 0 11222111 47999
Q ss_pred EEeCcccccc
Q 010191 495 AVFGHVHNYE 504 (515)
Q Consensus 495 vlsGH~H~Ye 504 (515)
+|+||.|...
T Consensus 222 IlgGHtH~~~ 231 (579)
T 3ztv_A 222 IVTGDSHYLY 231 (579)
T ss_dssp EEECSSCCEE
T ss_pred EEeCCCCccc
Confidence 9999999876
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=4.9e-05 Score=82.45 Aligned_cols=190 Identities=12% Similarity=0.087 Sum_probs=90.9
Q ss_pred CceEEEEEeecCCCCCCCCCccccc-------ccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchh--HHHHHHHH
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNF-------QRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQ 352 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~-------~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~--~wd~f~~~ 352 (515)
..++|+.++|+|..-.. . .|... ..+-...+..++++. +++ ++++.+||++....... ......+.
T Consensus 24 ~~l~Il~~nD~Hg~~~~-~-~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQ-T-SEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp EEEEEEEECCCTTCCSC-B-CTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred eEEEEEEecccccCCcc-c-ccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHH
Confidence 35999999999954221 0 11000 012233344443331 244 69999999995432211 11223333
Q ss_pred HhhhhcCCCEEEccCCCCCCCCCC--C-CCCCCCCCCCcccccccc-eecc-----CC-CCCCceEEEEEeCCEE--EEE
Q 010191 353 IEPIASTVPYMIASGNHERDWPGT--G-SFYGNMDSGGECGVLVEN-MFYV-----PT-ENRAKFWYSTDYGMFR--FCI 420 (515)
Q Consensus 353 i~~l~~~vP~~~v~GNHE~~~~~~--g-~~y~~~dsgge~g~~~~~-~f~~-----P~-~~~~~~~Ysfd~G~v~--fi~ 420 (515)
+..+ ... ++++||||+++... . .++. +++.++.. .... |. ....+.|.-++.++++ ||.
T Consensus 102 ln~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG 172 (546)
T 4h2g_A 102 MNAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 172 (546)
T ss_dssp HHHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEE
T ss_pred HHhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEE
Confidence 3333 333 57799999864210 0 1111 11112110 0000 00 0012345667888854 556
Q ss_pred EcCCCC--c-CCC-----HHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCC
Q 010191 421 ADTEQD--W-REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKV 492 (515)
Q Consensus 421 Ldt~~~--~-~~g-----~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~V 492 (515)
+.+... + .++ ....+.+++.+++........+|++.|.+. . . ...+...+ .+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~-~-------~---------d~~la~~~--~gi 233 (546)
T 4h2g_A 173 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGF-E-------M---------DKLIAQKV--RGV 233 (546)
T ss_dssp EECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCH-H-------H---------HHHHHHHS--TTC
T ss_pred ecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCc-c-------c---------hHHHHHhC--CCC
Confidence 655321 0 111 122344444444432234567999999875 0 0 11222211 579
Q ss_pred eEEEeCcccccc
Q 010191 493 DIAVFGHVHNYE 504 (515)
Q Consensus 493 dlvlsGH~H~Ye 504 (515)
|++|+||.|...
T Consensus 234 DlIlgGHtH~~~ 245 (546)
T 4h2g_A 234 DVVVGGHSNTFL 245 (546)
T ss_dssp CEEECCSSCCCC
T ss_pred cEEEeCCcCccc
Confidence 999999999864
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0002 Score=77.84 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=70.9
Q ss_pred CC-EEEEcCccccCCCchhHH---HHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccc-eeccCC
Q 010191 327 ID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPT 401 (515)
Q Consensus 327 pD-fVl~~GDi~y~~g~~~~w---d~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~-~f~~P~ 401 (515)
+| +++.+||++.... ...+ ....+.+..+ ..+++ + ||||+++... .+.. .-.+++.++.. ......
T Consensus 123 pd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~--~l~~--~l~~~~~p~L~aNv~~~~ 193 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRE--RVEE--LLGLFRGEFLSYNIVDDL 193 (562)
T ss_dssp CCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHH--HHHH--HHHHCCSEECCSSCEETT
T ss_pred CCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCHH--HHHH--HHHhCCCCEEEEEEEecC
Confidence 88 8999999995432 2222 2233344443 46665 6 9999863210 0000 00000111110 000000
Q ss_pred CC--CCceEEEEEeCC--EEEEEEcCCCC-------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCC
Q 010191 402 EN--RAKFWYSTDYGM--FRFCIADTEQD-------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSS 464 (515)
Q Consensus 402 ~~--~~~~~Ysfd~G~--v~fi~Ldt~~~-------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss 464 (515)
.+ ..+.|.-++.++ +-++.+.+... +....+..+-+.+.|++ .+...+|++.|.|. .
T Consensus 194 ~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~-~-- 267 (562)
T 2wdc_A 194 FGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGM-Q-- 267 (562)
T ss_dssp TCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCH-H--
T ss_pred CCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCC-c--
Confidence 00 012355667787 55666654321 11122333222233443 34567999999885 1
Q ss_pred CCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCcccccc
Q 010191 465 DLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (515)
Q Consensus 465 ~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH~H~Ye 504 (515)
. . ..+.++ .+||++|+||.|...
T Consensus 268 ------------~--d---~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 268 ------------L--D---AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp ------------H--H---HHHHTTSSSCCEEEECSSCCCC
T ss_pred ------------c--h---HHHHhcCCCCcEEEeCCCCCCC
Confidence 0 1 123333 589999999999865
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=3.4e-05 Score=81.50 Aligned_cols=86 Identities=15% Similarity=0.210 Sum_probs=53.6
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhh-----
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~----- 355 (515)
...+||++++|+|.+....... ........++++++. ..++|+||++||+++.... ......+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421100 011123344555443 2689999999999965432 2223344444443
Q ss_pred -------h----------------------hcCCCEEEccCCCCCC
Q 010191 356 -------I----------------------ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 -------l----------------------~~~vP~~~v~GNHE~~ 372 (515)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1379999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=97.84 E-value=3.4e-05 Score=80.66 Aligned_cols=86 Identities=15% Similarity=0.210 Sum_probs=53.0
Q ss_pred CCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-hhHHHHHHHHHhh-----
Q 010191 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (515)
Q Consensus 284 ~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-~~~wd~f~~~i~~----- 355 (515)
...+||++++|+|.+....... ........++++++. ..++|+|+++||+++.... ......+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421110 111123345555443 2689999999999965432 2223344444433
Q ss_pred -------h----------------------hcCCCEEEccCCCCCC
Q 010191 356 -------I----------------------ASTVPYMIASGNHERD 372 (515)
Q Consensus 356 -------l----------------------~~~vP~~~v~GNHE~~ 372 (515)
+ ...+|++++.||||..
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~ 133 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 133 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCc
Confidence 2 1379999999999974
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.69 E-value=6.3e-05 Score=71.12 Aligned_cols=83 Identities=10% Similarity=0.221 Sum_probs=45.3
Q ss_pred ccccceEEEEcCCCCCCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCc--
Q 010191 267 YIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-- 342 (515)
Q Consensus 267 ~~wS~~~~F~T~p~~~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~-- 342 (515)
..|+....|.+.. -.|++++||+|.. ...++++++.. .++|+|+++||+++....
T Consensus 12 ~~~~~~~~~~~~~------mmki~~iSD~H~~---------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~ 70 (208)
T 1su1_A 12 DLGTENLYFQSNA------MMKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNA 70 (208)
T ss_dssp -------------------CCEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSC
T ss_pred ccCcccceecccc------cEEEEEEEcCCCC---------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccc
Confidence 3455555564322 2799999999853 12334444332 579999999999964321
Q ss_pred -hhH--HHHHHHHHhhhhcCCCEEEccCCCCCC
Q 010191 343 -ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 372 (515)
Q Consensus 343 -~~~--wd~f~~~i~~l~~~vP~~~v~GNHE~~ 372 (515)
..+ -.+..+.++.+ ..|+++++||||..
T Consensus 71 ~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 71 LPEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CCTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred cccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 111 13444555443 25899999999974
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00069 Score=65.93 Aligned_cols=171 Identities=16% Similarity=0.213 Sum_probs=85.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccC-CCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~-~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.|++++||.=-. ++ ...+..++++. +. |+++..|..+.. .+.. ....+.+..+ .+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE
Confidence 479999998211 11 22333333321 34 888877666533 2332 2223333322 44444
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEc--CCCCcCCCHHHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD--TEQDWREGTEQYRFIEHCL 441 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld--t~~~~~~g~~Q~~WL~~~L 441 (515)
+.||||++...--.|.+..+ +. .--++|.....+.|.-++.++.++-+++ +......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~-------~v-rpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP-------VV-RPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS-------EE-CCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC-------ce-EeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 77999998531100110000 00 0012232222456777888886665554 3322111222233455666
Q ss_pred hcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 442 a~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
++. + .+.+|+.+|.-. ++ + .+.+. .+..-+||+++.||+|...-
T Consensus 133 ~~l--k-~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 133 EEE--K-ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp HHC--C-CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred HHh--C-CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 654 2 678999999532 11 1 11222 23345799999999999654
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00078 Score=65.71 Aligned_cols=173 Identities=12% Similarity=0.049 Sum_probs=85.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.|++++||.= +. + -...++.++++. +. |+++..|+.+..+ +... ...+.+..+ .+- .
T Consensus 1 m~ilf~GDv~-g~-----------~-G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~D-a 60 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------P-GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAG-C 60 (255)
T ss_dssp CEEEEECCBB-HH-----------H-HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCS-E
T ss_pred CEEEEEeccC-Ch-----------H-HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCC-E
Confidence 3799999982 11 1 123334444332 23 9999888877443 3321 222233222 333 3
Q ss_pred EccCCCCCCCCCCCCCCCCCCCCCcccccccceeccC-CCCCCceEEEEEeCCEE--EEEEcCCCCcCCCHHHHHHHHHH
Q 010191 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP-TENRAKFWYSTDYGMFR--FCIADTEQDWREGTEQYRFIEHC 440 (515)
Q Consensus 364 ~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~~~~g~~Q~~WL~~~ 440 (515)
++.||||++...--.+.+.. . ..+.. --++| .....+-|.-++.++++ ++.+-+......-..-.+-+++.
T Consensus 61 ~TlGNHefD~~~l~~~l~~~---~--~~~~~-~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 61 LTLGNHAWHHKDIYPMLSED---T--YPIVR-PLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp EECCTTTTSSTTHHHHHHTT---C--SCEEC-CSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred EEeccccccCchHHHHHhhC---C--CcEEE-EeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 56699999853110011000 0 00000 01122 22224556678888754 45554443221222233446666
Q ss_pred HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 441 La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
+++. +...+|+.+|.-. ++ | .+.+.. ...-+||+++.||+|...-
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 6665 4677999999421 10 1 112222 2345699999999998664
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0012 Score=65.41 Aligned_cols=177 Identities=15% Similarity=0.053 Sum_probs=88.7
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCC-CchhHHHHHHHHHhhhhcCCCEEE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~-g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
.+|++++||.+-.. |. ......++++.++ .++|+++..||.+..+ +.. ....+.+..+ .+- .+
T Consensus 4 ~m~ilf~GDv~G~~--G~-------~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D-a~ 67 (281)
T 1t71_A 4 SIKFIFLGDVYGKA--GR-------NIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN-YI 67 (281)
T ss_dssp CCEEEEECEEBHHH--HH-------HHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC-EE
T ss_pred eEEEEEECCcCChH--HH-------HHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC-EE
Confidence 37999999996221 00 0011233444433 2589999999998543 322 2222333322 233 45
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCC----CCceEEEEEeCCEE--EEEEcCCCCcCC--CHHHHHH
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN----RAKFWYSTDYGMFR--FCIADTEQDWRE--GTEQYRF 436 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~~Ysfd~G~v~--fi~Ldt~~~~~~--g~~Q~~W 436 (515)
+.||||+++.. ..+...+.. . +.. --++|... ..+-|.-++.++++ +|.+-+...+.+ -..-.+-
T Consensus 68 TlGNHefD~g~--~~~~~l~~~-~---~v~-~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~ 140 (281)
T 1t71_A 68 TMGNHTWFQKL--DLAVVINKK-D---LVR-PLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKV 140 (281)
T ss_dssp ECCTTTTCCGG--GHHHHTTCT-T---EEC-BSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHH
T ss_pred EEccCcccCCc--cHHHHhhhc-C---EEe-eccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHH
Confidence 67999998530 111000100 0 000 00112111 23456678888754 455544431221 1223444
Q ss_pred HHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 437 L~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
+++.++ +.+...+|+.+|.-. ++ + .+.+.. .-.-+||+++.||+|...-
T Consensus 141 a~~~v~---~~~~diIIv~~H~g~--t~-----------E---k~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 141 LKELIL---KRDCDLHIVDFHAET--TS-----------E---KNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp HHHHHT---TCCCSEEEEEEECSC--HH-----------H---HHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred HHHHHh---hcCCCEEEEEeCCCc--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 555555 356788999999421 10 1 112222 2334699999999999764
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=54.51 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=60.3
Q ss_pred CCCCcceeeecC-CCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 167 NAPVYPRLAQGK-VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 167 ~~P~~~~La~~~-~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
.+|..+.+.... +.++++|.|........ ..-.|+|...+..... .-..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID-DWIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT-TSEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc-ceEEEEE-----------------CCCceEE
Confidence 456666664433 57899999987642111 1235666553321100 0000111 1123457
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~ 283 (515)
+|++|+|++.|.+||......|...||+...|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998875556667899999999876544
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0011 Score=54.33 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=56.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
|.+|..+.+. ....++++|.|....+..-..-.|+|...+.. .+.... ........
T Consensus 8 P~~P~~~~~~-~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVT-ETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEE-EEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEE-eccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 4456555552 22568999999876321112346677654332 111100 00112357
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|+||+|++.|.|||......|...||+...++|.+..
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 8999999999999987755565668888889987643
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0026 Score=53.24 Aligned_cols=43 Identities=16% Similarity=0.112 Sum_probs=35.0
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~ 283 (515)
...+|++|+|+|.|.+||..-...|...+|+...++|.+.+..
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 3578999999999999998775556667899999999875543
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00075 Score=55.92 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++ ...+.+++.|.|........ ..-.|+|...+.... ...... +-....
T Consensus 11 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~-----------------~~~~~~ 68 (111)
T 1x5l_A 11 PSQVVVIRQ-ERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ----SYSTLK-----------------AVTTRA 68 (111)
T ss_dssp CCCCCCEEC-SCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS----SCEEEE-----------------ESSSEE
T ss_pred CCCCceEEE-EEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCce----eEEEec-----------------CCCCEE
Confidence 445554444 22357899999976532111 123566665432110 001111 112356
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~ 283 (515)
.|++|+|++.|.+||......|...||+...|+|++.++.
T Consensus 69 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 69 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 7899999999999998775556567899999999886543
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0052 Score=66.64 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=42.5
Q ss_pred CceEEEEEeecCCCCCCCCC--cccccccCcHHHHHHHHHh---cCCCC-EEEEcCccccCCCchh----HHHHHHHHHh
Q 010191 285 SLQQVIIFGDMGKDEADGSN--EYNNFQRGSLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQIE 354 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~--~y~~~~~~~~~~~~~l~~~---~~~pD-fVl~~GDi~y~~g~~~----~wd~f~~~i~ 354 (515)
..++|+.++|+|..-..... .|.. ..+....+...+++ ..+++ +++.+||++....... ......+.+.
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred eEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 45999999999975321110 1100 01112233333332 25677 5799999994322110 1111122222
Q ss_pred hhhcCCCEEEccCCCCCCC
Q 010191 355 PIASTVPYMIASGNHERDW 373 (515)
Q Consensus 355 ~l~~~vP~~~v~GNHE~~~ 373 (515)
.+ ..- ++++||||+++
T Consensus 93 ~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 93 KQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TS--CCS-EECCCGGGSSS
T ss_pred hc--CCC-EEeecchhccc
Confidence 22 233 56889999974
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.001 Score=55.09 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=58.5
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|.+|..+.+ ...+.++++|.|........ ..-.|+|...+.. .+.. .+. +..
T Consensus 7 ~P~~P~~p~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~-----------------~~~ 63 (109)
T 1x5x_A 7 GPSMPASPVL-TKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKP-----KYD-----------------GED 63 (109)
T ss_dssp CCCCCCCCEE-EEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEE-----EEE-----------------ESC
T ss_pred CCcCCCCCEE-EEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEE-----eEe-----------------CCc
Confidence 3556777775 34467899999987643111 1235667654332 1110 111 011
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...+++||+|++.|.|||......|...+|+...++|.+.
T Consensus 64 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 64 LAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp SEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 2457899999999999999875556566788888998764
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0012 Score=54.90 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=58.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+......++++|.|........ ..-.|+|...+...+... +. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-----YQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE-----EE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE-----Ee-----------------CCcE
Confidence 3556777766333457899999965421011 123566665433222111 11 1123
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
..++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999998755566678888999987654
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0012 Score=54.89 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+++ ...+.+++.|.|.......-..-.|+|...+..... .... +-....+|
T Consensus 18 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~----~~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEE------------------CSSSEEEE
T ss_pred CCCCccCEe-eeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCce----EEec------------------CCCcEEEE
Confidence 344554544 334578999999876431011234555443322110 0000 01135678
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999987755566678899999998654
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0016 Score=55.90 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=57.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC------CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
|.+|..+++ ...+.+++.|+|........ ..-.|+|...+..... ..... ..
T Consensus 19 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~----~~~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQA-VALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK----YKSED-----------------TT 76 (123)
T ss_dssp SCCCEEEEE-EEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC----CCCEE-----------------ES
T ss_pred CCCCcceEE-EEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc----EEEEe-----------------CC
Confidence 445665555 33357999999986532110 0235778765321100 00000 01
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 23568999999999999998764456677999999999875
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0094 Score=64.11 Aligned_cols=190 Identities=15% Similarity=0.102 Sum_probs=86.7
Q ss_pred eEEEEEeecCCCCCCCCCcc---ccc--ccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHHHHHHHHHhhhhc
Q 010191 287 QQVIIFGDMGKDEADGSNEY---NNF--QRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y---~~~--~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 358 (515)
++|+.++|+|..-..-.... ... ..+-...+..++++. ++++ +++.+||++..... ..+.+- +.+-.++.
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-~~~~~g-~~~i~~mN 81 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-FTVYKG-AEVAHFMN 81 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH-HHHHTT-HHHHHHHH
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH-HHHhCC-hHHHHHHh
Confidence 78999999985321100000 000 011233333333331 3444 77889999954321 111110 11222223
Q ss_pred CCCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc-ceeccCC------CCCCceEEEEEeCCE--EEEEEcCCCC--
Q 010191 359 TVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT------ENRAKFWYSTDYGMF--RFCIADTEQD-- 426 (515)
Q Consensus 359 ~vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~-~~f~~P~------~~~~~~~Ysfd~G~v--~fi~Ldt~~~-- 426 (515)
.+.| .+++||||+++... .+.+.. ..++..|+- ....... ...-..|.-++.+++ -||.+-+...
T Consensus 82 ~lgyDa~~lGNHEFd~G~~-~l~~~~--~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~~~ 158 (530)
T 4h1s_A 82 ALRYDAMALGNHEFDNGVE-GLIEPL--LKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPF 158 (530)
T ss_dssp HTTCCEEECCGGGGTTTTH-HHHTTT--TTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred ccCCCEEEEchhhhccCHH-HHHHHH--HhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccceee
Confidence 3333 67899999975321 000000 011111211 0000000 011234667788885 4566655431
Q ss_pred ---------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 010191 427 ---------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (515)
Q Consensus 427 ---------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~Vdlvl 496 (515)
+...-+..+...+.|++ .+..-+|++.|..+ . . . ..+.++ .+||+++
T Consensus 159 ~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~-------------~--d---~~la~~v~giD~Il 215 (530)
T 4h1s_A 159 LSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E-------------M--D---KLIAQKVRGVDVVV 215 (530)
T ss_dssp HSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H-------------H--H---HHHHHHSTTCCEEE
T ss_pred eccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h-------------H--H---HHHHhcCCCCCeec
Confidence 11112233333344544 34566999999653 0 0 1 112333 4899999
Q ss_pred eCcccccc
Q 010191 497 FGHVHNYE 504 (515)
Q Consensus 497 sGH~H~Ye 504 (515)
.||.|.+-
T Consensus 216 gGHsH~~~ 223 (530)
T 4h1s_A 216 GGHSNTFL 223 (530)
T ss_dssp CCSSCCCB
T ss_pred cCCcccee
Confidence 99999753
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.023 Score=52.23 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=71.7
Q ss_pred cceEEEEEEeeccc--ceEEEEEec---CCCCceEEEecCcccc------CCCCCCCcceeeecCCCCeEEEEEEeCCCC
Q 010191 125 GKGSLKLQLINQRS--DFSFVLFTN---GLLNPKVVAVSNKVTF------TNPNAPVYPRLAQGKVWNEMTVTWTSGYGI 193 (515)
Q Consensus 125 g~~s~~~~l~n~r~--~~~f~~~~~---~~~~~~~~a~s~~i~~------~~~~~P~~~~La~~~~~~~m~V~W~t~~~~ 193 (515)
+.....+.+-+.+. .|.|++... |...+ -..+..+.. ..+.+|..+.+ ...+.++++|.|......
T Consensus 66 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~--s~~s~~~~~~~~~~~~~~~~P~~~~~-~~~~~~sv~l~W~~p~~~ 142 (214)
T 2ibg_A 66 LGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE--SNTSAKFYLQPGAALDPMPVPELLEI-EEYSETAVVLHWSLASDA 142 (214)
T ss_dssp SEEEEEEEECSCCTTCEEEEEEEEEETTSCEEE--CCCCCCEECCCSTTSCCCCCCEECCC-BCCSSSCEEEEEECCTTC
T ss_pred cCcceeEEecCCcCCCEEEEEEEEEecCCCCCC--CCCcccEEeccCcCCCCCCCCcccEE-EEccCCeEEEEEeCCCcc
Confidence 34566667767664 577776654 22210 000111111 12223444333 233578999999876310
Q ss_pred --C-CCccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccc
Q 010191 194 --N-EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIW 269 (515)
Q Consensus 194 --~-~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~w 269 (515)
. -..-.|+|...+. ..+.. .+.. .......+|+||+|++.|.|||......|...+
T Consensus 143 ~~~~i~~Y~v~~~~~~~~~~~~~----~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ 202 (214)
T 2ibg_A 143 DEHLITGYYAYYRPSSSAGEYFK----ATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASEF 202 (214)
T ss_dssp CGGGCCEEEEEEEETTCCSCCEE----EEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCC
T ss_pred CCCCcceEEEEEEECCCCcceEE----eecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCC
Confidence 0 1123566765443 11110 1111 111124578999999999999998755666678
Q ss_pred cceEEEEcCC
Q 010191 270 SSEYQFKASP 279 (515)
Q Consensus 270 S~~~~F~T~p 279 (515)
|+...++|..
T Consensus 203 S~~~~~~T~~ 212 (214)
T 2ibg_A 203 SALKQGRTQR 212 (214)
T ss_dssp CCCEEEECCC
T ss_pred cceEeeEecC
Confidence 8899999864
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0024 Score=53.15 Aligned_cols=41 Identities=24% Similarity=0.376 Sum_probs=34.8
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~ 283 (515)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999875556667899999999886554
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0015 Score=53.99 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=57.4
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCC--ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++ ...+.+++.|.|......+.. .-.|+|...+..... .... .+-...+
T Consensus 8 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~ 65 (108)
T 2djs_A 8 PSTVPIMHQ-VSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN----SSMA-----------------RSQTNTA 65 (108)
T ss_dssp CCCCSCCEE-EEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTT----CEEE-----------------EESSSEE
T ss_pred CCCCcceEE-EecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcc----eeEE-----------------ecCccEE
Confidence 455665555 233578999999876421100 124555544322110 0010 0112456
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+|+||+|++.|.+||......|...||+...|+|.+..
T Consensus 66 ~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 66 RIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 78999999999999988755566678999999998753
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.019 Score=51.69 Aligned_cols=90 Identities=19% Similarity=0.070 Sum_probs=50.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|..+.+ ...+.++++|.|.-..+ .-..-.|+|...++.... ..... +......
T Consensus 94 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~ 150 (186)
T 1qr4_A 94 VVGSPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVPITGGTPN----VVTVD-----------------GSKTRTK 150 (186)
T ss_dssp CCCCCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEETTCCCCE----EEEEE-----------------TTCCEEE
T ss_pred CCCCCCccEE-EEeCCCEEEEEEECCCC-cccEEEEEEEeCCCCCce----EEEcC-----------------CCcCEEE
Confidence 4667776655 33467999999986532 112346677654332110 11111 1224567
Q ss_pred ecCCCCCCEEEEEeceecCCCccccc--ceEEEEcCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWS--SEYQFKASPY 280 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS--~~~~F~T~p~ 280 (515)
|+||+||+.|.++|...... +.| ....|+|.|.
T Consensus 151 i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 151 LVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp ECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred EcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 89999999999999875322 223 3456777763
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0024 Score=52.78 Aligned_cols=92 Identities=17% Similarity=0.241 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCC-C-CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++. ..+.+++.|.|....... . ..-.|+|...+... ...+. +.....
T Consensus 8 P~~P~~~~~~-~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~------~~~~~-----------------~~~~~~ 63 (106)
T 1x4x_A 8 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM------QICYC-----------------GPGLSY 63 (106)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC------CEEEE-----------------ESCSEE
T ss_pred cCCCCCCEEE-EcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce------EEEEe-----------------CCcceE
Confidence 4556666552 235789999998764310 0 11355665443211 01111 011245
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
.|+||+|++.|.|||......|...||+...++|.+.+
T Consensus 64 ~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 78999999999999998755566678999999998653
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0012 Score=55.86 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=57.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC------CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
|.+|..+++ ...+.+++.|+|.-...... ..-.|+|....... ....+. .+.
T Consensus 9 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEE-EEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEE-EEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 345666665 33357999999986532110 02356676531110 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 24578999999999999998875556667999999999865
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0008 Score=54.86 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=30.7
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..|+||+|++.|.+||......|...||+...|+|.|
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 66 FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 4789999999999999877555666788888888876
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0027 Score=52.63 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++ ...+.+++.|.|.-....+. ..-.|+|...+..... ....... .. ..+
T Consensus 8 P~~p~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRV-TRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPS---SVRFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEE-EEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTT---TSEEEEE---------------SS--SEE
T ss_pred CCCCCccEE-EecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCc---eeEEEcc---------------CC--CEE
Confidence 445655555 23357899999977632110 1235666654311100 0001110 11 256
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 89999999999999998755566678999999998754
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.012 Score=54.27 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=58.1
Q ss_pred CCCCCCcceeeecC---CCCeEEEEEEeCCCCCC------CccEEEEccCCCCcceecCcceEEeccccCCCCCcccccc
Q 010191 165 NPNAPVYPRLAQGK---VWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWR 235 (515)
Q Consensus 165 ~~~~P~~~~La~~~---~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~ 235 (515)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 46677766665432 36899999987643210 12356666544322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEeceecCCCc-ccccceEEEEcCC
Q 010191 236 DPGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKASP 279 (515)
Q Consensus 236 ~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~~F~T~p 279 (515)
+......|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987644454 5688899999964
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00068 Score=64.25 Aligned_cols=64 Identities=19% Similarity=0.327 Sum_probs=43.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.|++++||+|.. ...+.++++.. .++|.++++||+++. |... .+.++.+. ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~-g~~~-----~~~~~~l~-~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVDR-GAEN-----VECLELIT-FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSSS-SSCH-----HHHHGGGG-STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccCC-CCCh-----HHHHHHHh-cCCEE
Confidence 679999999832 23455666553 368999999999954 3322 12233332 35899
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
++.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999964
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.015 Score=59.01 Aligned_cols=49 Identities=24% Similarity=0.173 Sum_probs=28.0
Q ss_pred CCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 447 ~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
.+...+|+++|..+ ..+.. ....+.. ...|..-+ .+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~----~~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ----SSGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC----CTTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 45777999999875 21111 0011111 11232222 589999999999863
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0038 Score=52.34 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=57.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCC-CCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGY-GINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~-~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+++. ..+.++++|.|.... .... ..-.|+|...+...+.. ... ..+-...
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~~~ 76 (120)
T 1x5f_A 18 PSAPRDVVAS-LVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERV------ENT--------------SHPGEMQ 76 (120)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEE------EEC--------------SSTTCSE
T ss_pred CCCCCCcEEE-ecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceE------EEe--------------ccCCccE
Confidence 4455555442 235789999998764 2111 12367776553322110 000 0112345
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+.|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 77 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 77 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 68899999999999998775455567888999999754
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0049 Score=50.82 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=56.8
Q ss_pred CCCCCcceeeec-CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+... .+.++++|+|.-...... ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 455666655433 367899999987642110 013455655433222110 00 0 125
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.+|++|+|++.|.+||......|...||+...++|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999877555666789999999954
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0012 Score=54.47 Aligned_cols=39 Identities=23% Similarity=0.208 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..++|+||+|+|.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356799999999999999877555666788999999987
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0012 Score=55.66 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=57.1
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|.+|..+.+......++++|.|........ ..-.|+|...+. ..+... +. +..
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~~-----------------~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----YS-----------------GAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----EC-----------------SSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----Ee-----------------ccc
Confidence 3456666666423457899999986542100 123566654432 122110 00 112
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
...++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 24578999999999999998754555667887788886543
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0011 Score=55.40 Aligned_cols=94 Identities=17% Similarity=0.145 Sum_probs=57.3
Q ss_pred CCCCcceeeec---CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 167 NAPVYPRLAQG---KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 167 ~~P~~~~La~~---~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
..|..|.+... .+.++++|.|........ ..-.|+|.......+.. .+. +...
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 65 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFRE-----VYV-----------------GKET 65 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEE-----EEE-----------------ESCS
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEE-----EEe-----------------CCcC
Confidence 34555544332 257999999987653110 12356776543222211 011 0112
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~ 282 (515)
..+|+||+|++.|.|||......|...||+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 34689999999999999887555666788999999987653
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0043 Score=51.80 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=58.1
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++.. .+.+++.|.|........ ..-.|+|...+...... ... .......
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~------~~~--------------~~~~~~~ 75 (119)
T 2ed7_A 17 LPSAPRDVVPVL-VSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERA------LNT--------------TQPGSLQ 75 (119)
T ss_dssp SCCCCSCCEEEE-ECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEE------EEC--------------CCTTCCE
T ss_pred CCcCCcceEEEe-cCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCccee------eEe--------------ecCCceE
Confidence 456677766532 357899999987542110 01245555443322110 000 0112345
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..|++|+|++.|.+||......|...||+...++|.+.
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 76 LTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 68899999999999998775556667888899998753
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0072 Score=50.57 Aligned_cols=96 Identities=18% Similarity=0.042 Sum_probs=58.0
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCC--CC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|..+++ ...+.++++|.|..... .. -..-.|+|...+....... ... .....+-....
T Consensus 18 ~P~~~~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV---------------EMKATGDSEVY 80 (122)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC---------------BCCCCSSEEEE
T ss_pred CCcceEE-EeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EEE---------------EEecCCceeEE
Confidence 3444554 33467899999988642 01 1123566665443211000 000 00113446778
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765455566888888988754
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0086 Score=49.02 Aligned_cols=91 Identities=9% Similarity=-0.066 Sum_probs=56.1
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++ ...+.++++|+|....... -..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 455665554 3335789999998763211 11235666554332211 0000 0 1345
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.|++|+|++.|.+||......|...+|+...++|...
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998775555566888899998653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0098 Score=54.79 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCCcceeeecC-CCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 168 APVYPRLAQGK-VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 168 ~P~~~~La~~~-~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
+|..+.+.... +.++++|+|........ ..-.|+|...+...... -..... ++-.....
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 56556654443 37899999987542110 12256666543321100 000011 11234567
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
|+||+|++.|.++|......|...+|+...|+|..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999877555666788888888764
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0052 Score=51.60 Aligned_cols=95 Identities=15% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+++ ...+.++++|+|.......-..-.|+|...+..... ...... .+....++|+|
T Consensus 21 ~P~~l~~-~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGV-KVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA--ANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEE-EEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG--CEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEE-EEccCCEEEEEecCCCCCccceEEEEEEECCCcccC--cEEEEc-----------------CCCEeEEEECC
Confidence 3444554 223578999999876420011235666544322100 000111 11224568999
Q ss_pred CCCCCEEEEEeceecCCCcccccceEEEEcCCCCC
Q 010191 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~ 282 (515)
|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999887555666788889999976543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0041 Score=51.79 Aligned_cols=91 Identities=15% Similarity=0.128 Sum_probs=56.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++. ..+.++++|.|....... -..-.|+|...+...+. ... ......
T Consensus 18 P~~P~~l~~~-~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~-----------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAY-AASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ------DVD-----------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEE-EEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC------CEE-----------------ECSSEE
T ss_pred CcCCCccEEE-ecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE------EEe-----------------cCCceE
Confidence 4556666652 235789999998753211 11235666654332210 000 012356
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998775556567888889999754
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0056 Score=52.13 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=58.0
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++. ..+.++++|+|........ ..-.|+|...+..... ...... .+....
T Consensus 27 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~ 86 (130)
T 1wfo_A 27 VPGPPMGILFP-EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEVL-----------------APSARQ 86 (130)
T ss_dssp CCCCCCCCEEE-EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEEE-----------------CTTCCE
T ss_pred CCCCCCceEEE-ecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEEe-----------------CCCceE
Confidence 34556666553 2357899999987532111 1235666554322100 000010 123456
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.+|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 87 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 87 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 78899999999999998875556667888889998754
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0029 Score=53.84 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=48.9
Q ss_pred CCCCeEEEEEEeCCCCC-C-CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 010191 178 KVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (515)
Q Consensus 178 ~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (515)
.+.++++|+|..+.+.. + ..-.|+|..++...+... ... ++....++|.||+||+.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 46899999998654211 1 113778877643322110 000 1112246799999999999
Q ss_pred EEeceecCCCcccccceEEEEcCCCC
Q 010191 256 YKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 256 Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+||......|...-| ...|+|.+.+
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~~ 103 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPKP 103 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCCC
Confidence 999876333433322 4678886643
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.016 Score=58.90 Aligned_cols=86 Identities=17% Similarity=0.261 Sum_probs=41.9
Q ss_pred ceEEEEEeecCCCCCCCCCcccc--cccCcHHHHHHHHHhc--CCCC-EEEEcCccccCCCchhHHHHHH-------HHH
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFT-------AQI 353 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~--~~~~~~~~~~~l~~~~--~~pD-fVl~~GDi~y~~g~~~~wd~f~-------~~i 353 (515)
.++|+.++|+|..-.. ...+.. ...+.+..+..++++. +.++ ++|..||++.... ...|-.+. +.+
T Consensus 8 ~l~Il~tnD~Hg~~~~-~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~-~~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMD-FDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSP-LGDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEECCCTTCCSS-EETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSH-HHHHHHHHCCCTTCCCHH
T ss_pred eEEEEEEeeCCCCccc-ccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCch-hHHhhhhcccccccchHH
Confidence 4899999999964321 000000 0112233344443331 3444 7789999994322 11121110 012
Q ss_pred hhhhcCCCE-EEccCCCCCCC
Q 010191 354 EPIASTVPY-MIASGNHERDW 373 (515)
Q Consensus 354 ~~l~~~vP~-~~v~GNHE~~~ 373 (515)
-.++..+.+ ++++||||+++
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTT
T ss_pred HHHHHhcCCCEEecchhhhhc
Confidence 222333333 56789999974
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0055 Score=51.67 Aligned_cols=96 Identities=16% Similarity=0.082 Sum_probs=54.5
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCC-CCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
.-|.+|..+.+. ....++++|.|.-..+... ..-.|+|...+ ...+..... .. ++..
T Consensus 16 ~~P~~P~~~~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEE-EccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 456677777663 3457899999985432110 12357776554 222221100 00 1123
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceE-EEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~-~F~T~p 279 (515)
...+|++|+|+++|.|||......|...+|..- .++|.+
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~ 115 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCC
Confidence 456789999999999999976444444455443 355544
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.012 Score=49.08 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCC--ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
.|.+|...++ .....+++.++|......... .-.|+|..+.. ..... .-...
T Consensus 7 ~Ps~v~~l~v-~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~-----------------~~~t~ 60 (104)
T 2dle_A 7 GAIQVFDVTA-VNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--------SSNLN-----------------VSEPR 60 (104)
T ss_dssp SCCBEEEEEE-EEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--------EEEEE-----------------ESSSE
T ss_pred CCCCCceEEE-EEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--------eEEEc-----------------CCCCE
Confidence 3444444444 344678999999866431111 24566654321 00100 01235
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~ 282 (515)
+.|+||+|||.|.++|.... ++...-+....++|.|.+.
T Consensus 61 ~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 61 AVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp EECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred EEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 78999999999999999863 2222223456778877553
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0018 Score=64.14 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=43.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
+++++||+|.. ...+.++++.. +++|.++++||+++ .|..+ .+.++.+..+ ..+++.
T Consensus 2 ~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~vd-rG~~s--~~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 2 ATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLVA-RGPGS--LDVLRYVKSL--GDSVRL 61 (280)
T ss_dssp CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCSS-SSSCH--HHHHHHHHHT--GGGEEE
T ss_pred eEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcCC-CCCcc--HHHHHHHHhC--CCceEE
Confidence 68999999742 34566777654 35799999999995 44322 1223333333 127999
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999963
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0031 Score=54.22 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=56.5
Q ss_pred CCCCCC-cceeeecCCCCeEEEEEEeCCCCCCCcc-EEEEccCCCCc----ceecCcc-eEEeccccCCCCCccccccCC
Q 010191 165 NPNAPV-YPRLAQGKVWNEMTVTWTSGYGINEAEP-FVEWGPKGGDR----TYSPAGT-LTFGRGSMCGAPARTVGWRDP 237 (515)
Q Consensus 165 ~~~~P~-~~~La~~~~~~~m~V~W~t~~~~~~~~~-~V~yg~~~~~~----~~~~~~~-~t~~~~~mc~~pa~t~g~~~~ 237 (515)
-|.+|. .+++ ...+.++++|.|...... .... .|+|....+.. ....... ..... ..
T Consensus 15 ~P~~P~~~~~~-~~~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--------------~~ 78 (127)
T 2dmk_A 15 APNPPSIREEL-CTASHDTITVHWISDDEF-SISSYELQYTIFTGQANFISLYNSVDSWMIVPN--------------IK 78 (127)
T ss_dssp SCCCCEEEEEE-EEEETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--------------EC
T ss_pred CCcCCCCCCEE-EeeeCCEEEEEECCCCCC-CccceEEEEEEecccccccccccCCCCcEEeec--------------cc
Confidence 466676 5555 233578999999987531 1123 67776411100 0000000 00000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+ ...+++||+|+++|.|||......|. .+|+...++|++.+
T Consensus 79 ~--~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~~ 119 (127)
T 2dmk_A 79 Q--NHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQP 119 (127)
T ss_dssp S--SEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSSC
T ss_pred C--CeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCCc
Confidence 1 23478999999999999998755555 56788889998653
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0072 Score=50.89 Aligned_cols=93 Identities=13% Similarity=-0.013 Sum_probs=54.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCC-CC-C-CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGY-GI-N-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~-~~-~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..|.+. ..+.++++|.|.... +. . -..-.|+|...+...+...... ....-
T Consensus 10 ~p~~P~~P~v~-~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~ 68 (112)
T 1bpv_A 10 PIDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILEN 68 (112)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSS
T ss_pred CCCCCCCCEEE-EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccC
Confidence 35667777763 335789999998432 10 1 1234788876554433221100 00112
Q ss_pred EEEecCCCCCCEEEEEeceecCCCc-ccccceEEEEcC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~~F~T~ 278 (515)
..+++||+||+.|.|||......|. ..+|+.-...|.
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 3568999999999999998754453 445655555543
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0071 Score=50.56 Aligned_cols=92 Identities=23% Similarity=0.372 Sum_probs=56.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
-|.+|..+.+. ..+.++++|.|....+ ...+ .|+|..... ..+.. .+. + ..
T Consensus 17 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~-----~~~------------~---~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIA-NRTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFCQ-----CYM------------G---SQ- 72 (118)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCEE-----EEE------------E---SC-
T ss_pred CCcCCCCcEEe-ccCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeEE-----eec------------c---CC-
Confidence 35566666652 3357899999987642 2223 445544322 11110 011 0 11
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
...++++|+|++.|.|||......|...||+...|+|.+.+
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 34578999999999999997755566678888889887643
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0021 Score=62.85 Aligned_cols=64 Identities=20% Similarity=0.285 Sum_probs=41.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CC-CCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~-pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (515)
.|++++||+|.. ...+.++++.. .. .|.++++||+++.+.... +.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~---~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF---GVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH---HHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH---HHHHHHHH----CCCE
Confidence 389999999832 24456666543 23 499999999995432221 22333322 4799
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
++.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.053 Score=57.17 Aligned_cols=143 Identities=10% Similarity=0.141 Sum_probs=79.6
Q ss_pred CceEEEEEeecCCCCCCCCCcccccccCcHHHH-HHHHH---------hcCCCCEEEEcCccccCCCc------------
Q 010191 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT-RQLIQ---------DLKNIDIVFHIGDICYANGY------------ 342 (515)
Q Consensus 285 ~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~-~~l~~---------~~~~pDfVl~~GDi~y~~g~------------ 342 (515)
...++++++|+|.+.... .+ ...++.+ +.|.. ...++.-+|++||++...+.
T Consensus 199 ~~~~ialVSGL~igs~~~--~~----~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG--ES----LLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCH--HH----HHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCcc--cc----hHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 346899999999986310 00 0112222 22221 12468899999999965321
Q ss_pred -------hhHHHHHHHHHhhhhcCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccc---eeccCCCCCCceEEEEE
Q 010191 343 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN---MFYVPTENRAKFWYSTD 412 (515)
Q Consensus 343 -------~~~wd~f~~~i~~l~~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~~Ysfd 412 (515)
..+.+.+-+.+..+.+.+|+.+.|||||-... .. ....-.+|-.+-.. .+..- .|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~----~l-PQqplh~~lfp~s~~~~~~~~v----tNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY----TL-PQQPLHPCMFPLATAYSTLQLV----TNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS----SS-SCCCCCTTSCHHHHTSTTEEEC----CSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccc----cC-CCCCcCHHHhhhhhhcCccEEe----CCC-eEEE
Confidence 12334455566677889999999999996411 00 11111122111111 12221 122 5699
Q ss_pred eCCEEEEEEcCCC-----CcCCCHHHHHHHHHHHhc
Q 010191 413 YGMFRFCIADTEQ-----DWREGTEQYRFIEHCLAS 443 (515)
Q Consensus 413 ~G~v~fi~Ldt~~-----~~~~g~~Q~~WL~~~La~ 443 (515)
+++++|++..... .+.+.+.-++.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999999876543 122334566788988876
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0078 Score=51.14 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=55.2
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccC---CCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPK---GGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
-|.+|..+.+ .....++++|.|.-..+... ..-.|+|... +...+.... ... ..+.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~---~~~---------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH---QLS---------------NEPD 77 (124)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE---EEE---------------SCTT
T ss_pred CCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee---eEc---------------cCCC
Confidence 3455655554 33467899999966542111 1236677652 222221100 000 0112
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccce-EEEEcCCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPYP 281 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~-~~F~T~p~~ 281 (515)
....+++||+|++.|.|||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 235688999999999999988744454555653 467777643
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0028 Score=54.40 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=33.6
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
.++++||+|+|+|.+||......|...||+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998865666678888999998653
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0074 Score=50.78 Aligned_cols=89 Identities=15% Similarity=0.062 Sum_probs=55.1
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCC--C--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGI--N--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|..+++ ...+.++++|+|...... . -..-.|+|...+...+.. .. ++.....
T Consensus 31 ~P~~l~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~-----~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSL-EVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEME-----TL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCE-EEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEE-----EE-----------------CSSCSEE
T ss_pred CCeeeEE-EEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceE-----Ee-----------------cCCcCEE
Confidence 3545554 223578999999876421 1 012356666543322110 00 1123456
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.|+||+|++.|.+||......|...||+...|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 799999999999999877555666789999999864
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.004 Score=63.33 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=43.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC----------CCCEEEEcCccccCCCchhHHHHHHHHHhhh
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~----------~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l 356 (515)
.+++++||+|.. ...+.++++... ++|.++++||+++.+.... +.+..+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHH
Confidence 589999999732 345666666432 4799999999995433322 222222222
Q ss_pred -----hcCCCEEEccCCCCCC
Q 010191 357 -----ASTVPYMIASGNHERD 372 (515)
Q Consensus 357 -----~~~vP~~~v~GNHE~~ 372 (515)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2345699999999963
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0088 Score=49.91 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=52.5
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCC---ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+++ ...+.++++|.|..... .+ .-.|+|...+...+. .... ..+...
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~--~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVF-SALGPTSLRVSWQEPRC--ERPLQGYSVEYQLLNGGELH------RLNI--------------PNPAQT 73 (118)
T ss_dssp CCCCCCCCEE-CCCBTTEEEEECCCCCC--SSCEEEEEEEEEBSSSCCEE------EEEE--------------SCTTCC
T ss_pred CCCCCCceEE-EeCCCCEEEEEeCCCCC--CCCccEEEEEEEECCCCceE------EEEc--------------CCCCcC
Confidence 4456666654 33457899999987643 11 124555543322111 0000 011224
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccc-eEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~-~~~F~T~p 279 (515)
..+|+||+|++.|.+||......|...||+ ...++|.+
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 567899999999999998875455555666 44555543
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.02 Score=52.68 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=54.3
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCC------CCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYG------INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
+|..+.+ ...+.++++|+|..... .....-.|+|...+..... .... .+...
T Consensus 7 ~P~~l~~-~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~ 64 (211)
T 3p4l_A 7 PPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNA-----------------NATTL 64 (211)
T ss_dssp CCEEEEE-EECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEE-----------------EESSS
T ss_pred CCCCEEE-EecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEe-----------------CCCce
Confidence 4555554 33457899999986421 0111246677654332110 0010 01124
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...|++|+|++.|.++|......|...||....++|.+.
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 65 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 567899999999999998765455556788889998653
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.016 Score=47.68 Aligned_cols=92 Identities=13% Similarity=0.043 Sum_probs=51.2
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+.+|...++. ..+.++++|.|.-... ...-.|+|...+...+. ...... .++. .+.|
T Consensus 9 ~~~P~~l~~~-~~~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~---~~~~~~---------------~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLA-AVTPRTVHLTWQPSAG--ATHYLVRCSPASPKGEE---EEREVQ---------------VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSS--CSEEEEEEEESSSCCSS---CCEEEE---------------ESSS--EEEE
T ss_pred CCCCceeEEE-ecCCCEEEEEEeCCCC--CCeEEEEEEECCCCCCc---ceEEEe---------------cCCC--EEEE
Confidence 4567777663 3356899999976542 22346667654321110 000000 0122 7789
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+||+|+|+|.++|......+... .....++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCCC
Confidence 99999999999998763222211 123456666543
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.021 Score=61.62 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=70.5
Q ss_pred EEEEEEeecc--cceEEEEEec---CCCCceEEEecCcccc-CCCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccE
Q 010191 128 SLKLQLINQR--SDFSFVLFTN---GLLNPKVVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPF 199 (515)
Q Consensus 128 s~~~~l~n~r--~~~~f~~~~~---~~~~~~~~a~s~~i~~-~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~ 199 (515)
..++.|-+.+ ..|.|.+... |...| -..|..+.+ +.+.+|..+.+ ...+.++++|+|........ ..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 3345555555 4677777553 21111 001122222 24556777766 45568999999987532111 1236
Q ss_pred EEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 200 VEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 200 V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
|+|...+... ...+.. +....++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 7776553320 001111 112356799999999999999987555666789999999987
Q ss_pred CC
Q 010191 280 YP 281 (515)
Q Consensus 280 ~~ 281 (515)
..
T Consensus 534 ~~ 535 (536)
T 3fl7_A 534 PE 535 (536)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.016 Score=45.92 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=23.8
Q ss_pred EEecCCCCCCEEEEEeceecCCCc-ccccceEEEEc
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKA 277 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~~F~T 277 (515)
..+++|+||++|+|+|......|. ...|....++|
T Consensus 53 ~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 53 ATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 468999999999999987643333 22345555543
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.014 Score=49.51 Aligned_cols=41 Identities=15% Similarity=-0.167 Sum_probs=32.7
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
....+|+||+|+|.|.+||......|...||....++|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35568999999999999998765455566888888998754
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.013 Score=48.93 Aligned_cols=40 Identities=20% Similarity=0.085 Sum_probs=32.7
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+.|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998775556667888899999754
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.08 Score=52.96 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=48.7
Q ss_pred CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 010191 178 KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (515)
Q Consensus 178 ~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (515)
.+.++++|+|.-..+... ..-.|+|...+...+.. .... ++......|++|+|++.|.
T Consensus 304 ~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~---~~~~-----------------~~~~~~~~i~~L~~~t~Y~ 363 (389)
T 2jll_A 304 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWL---EKKV-----------------QGNKDHIILEHLQWTMGYE 363 (389)
T ss_dssp ETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCB---CCEE-----------------CTTCCEEEECSCCTTCEEE
T ss_pred CcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCccee---Eeec-----------------cCCcceEEeCCcCCCCEEE
Confidence 367899999986432110 12356666533222110 0011 1223456789999999999
Q ss_pred EEeceecCCCcccccceEEEEcCCCC
Q 010191 256 YKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 256 Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+||......|...+|.. .|+|++.|
T Consensus 364 ~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 364 VQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp EEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred EEEEEEcCCcCCCceee-EecCCCCC
Confidence 99998754555566654 89998865
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.011 Score=50.18 Aligned_cols=42 Identities=12% Similarity=0.051 Sum_probs=33.9
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.....+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 345678899999999999999875555567899899999763
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.017 Score=47.63 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=51.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
|.+|...++ ...+.+++.|.|.-..+ .-..-.|+|...... ... .... ++-...++
T Consensus 3 p~~P~~l~v-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~~~----~~~v-----------------~~~~~~~~ 59 (104)
T 2rb8_A 3 LDAPSQIEV-KDVTDTTALITWMPPSQ-PVDGFELTYGIKDVPGDRT----TIDL-----------------TEDENQYS 59 (104)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCCE----EEEE-----------------ETTCCEEE
T ss_pred CCCCCccEE-EEecCCeEEEEEcCCCC-ccceEEEEEEECcCCCceE----EEEc-----------------CCCcCEEE
Confidence 456766665 33467899999976532 112236777643211 110 0111 11223568
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|+||+|||+|.++|......|... .....|+|.+..
T Consensus 60 l~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 60 IGNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred eCCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 999999999999998763333221 234568887654
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.017 Score=48.33 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=53.6
Q ss_pred CCCCCCcc--eeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCC
Q 010191 165 NPNAPVYP--RLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (515)
Q Consensus 165 ~~~~P~~~--~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g 238 (515)
.|.+|..+ .+ ...+.++++|.|.-..+ ...+ .|+|...+ ..+.. .. . ..++
T Consensus 17 ~P~~P~~~~~~~-~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~~------~~-~------------~~~~ 73 (121)
T 1wf5_A 17 LPHAPEHPVATL-STVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWTV------LL-A------------SVDP 73 (121)
T ss_dssp CCCCCSSCEEEE-CSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCEE------EE-S------------SCCT
T ss_pred CCccCCCcceee-EeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCceE------eE-c------------ccCC
Confidence 46677766 44 23357899999976532 2223 34454432 11111 00 0 0012
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcccccceE-EEEcCCC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~-~F~T~p~ 280 (515)
.....+++||+|+++|.|||......|...+|..- .++|++.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 23456789999999999999987544555566554 4666654
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.023 Score=48.08 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=31.5
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
.++|++|+|+|+|.+||......|...+|+...|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 567899999999999998775455566888888877664
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.008 Score=50.00 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=52.6
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+. ..+.++++|.|....+... ..-.|+|...+. ..+.... . .....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA-----N----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE-----E----------------EECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc-----c----------------ccCcC
Confidence 45567766663 3457899999976542110 113456654421 1111100 0 00112
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEE-EEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQ-FKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~-F~T~p~ 280 (515)
...+++|+|++.|.|||......|...||..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998764444445565444 777654
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.026 Score=45.99 Aligned_cols=79 Identities=11% Similarity=0.128 Sum_probs=46.9
Q ss_pred CCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 010191 179 VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTY 256 (515)
Q Consensus 179 ~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Y 256 (515)
+.+++.|.|........ ..-.|+|...+...+.. .... +.....+|++|+|++.|.+
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDFG-----------------KDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEeC-----------------CCccEEEeCCCCCCCEEEE
Confidence 67899999987642111 12356776544322211 1111 1123567899999999999
Q ss_pred EeceecCCCcccccceEEEEcCC
Q 010191 257 KLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 257 rv~~~~~dg~~~wS~~~~F~T~p 279 (515)
||......|...+|. ..|+|..
T Consensus 78 ~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 78 RLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEcCCcccCCee-eEEeCCC
Confidence 998764444445555 4577753
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.034 Score=52.15 Aligned_cols=101 Identities=14% Similarity=0.038 Sum_probs=56.4
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++. ..+.++++|.|.-...... ..-.|+|...+...... ....... ........
T Consensus 98 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFN-VVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEE-ECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS-SCCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEE-EecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc-CcceEEE--------------ecCCcceE
Confidence 35556666653 3457899999986532110 12256666543322110 0000000 00112345
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccc-eEEEEcCCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASPYP 281 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~-~~~F~T~p~~ 281 (515)
..|+||+|++.|.++|......|...+|+ ...|+|.+.+
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 67999999999999998765445555665 4778886543
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.025 Score=47.25 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=52.3
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|...++ ...+.+++.|.|.-... .-..-.|+|...++... .... ++-...+.
T Consensus 7 ~p~~P~~l~~-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEE-EeccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 4556765554 23357899999976532 11223567765432110 0111 11223568
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|+||+|+|+|.++|......+... .....|+|.+.+
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~~ 98 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 98 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCCC
Confidence 999999999999998763222211 234678887543
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0076 Score=60.39 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc--CCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~vP~ 362 (515)
.+++++||+|.. ...+.++++.. ...+.++++||+++ +|..+ .+.+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CCCCh--HHHHHHHHHHHhhCCCcE
Confidence 358999999732 34556666543 34677899999995 44422 112233332221 2348
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.011 Score=54.43 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=56.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCC---CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+.... .+++|.|....... -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~--~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS--STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECS--SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeecc--CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 45567666653332 36999998763211 112356776554332211 111100 001223
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+++||+|++.|.|||......|...+|....++|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765455556788888998764
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.038 Score=46.56 Aligned_cols=82 Identities=16% Similarity=0.349 Sum_probs=43.0
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCC-CCcceecCcceEEeccccCCCCCcccccc-CCCeEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWR-DPGYIH 241 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~t~g~~-~~g~~h 241 (515)
.|..|.+ ...+.++++|.|.-+.+ ...+ .|+|...+ ...+........+... -|. ..+-..
T Consensus 5 pP~~P~v-~~~~~~sv~L~W~~P~~--~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~----------~~~~~~~~~~ 71 (115)
T 2ic2_A 5 PPTPPNV-TRLSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP----------KWNSELGKSF 71 (115)
T ss_dssp CCCCCEE-EECC---EEEEEEEECC--SSCCEEEEEEEEEECC---CCEEEEEEEECCSC----------SCSSSSEEEE
T ss_pred CCCcCEe-EEEeCCEEEEEEcCCCC--CCCCCceEEEEEEECCCCCCceECccccccccc----------ccccccCcee
Confidence 4555554 34467899999988654 2233 45666552 2233222111111100 000 123345
Q ss_pred EEEecCCCCCCEEEEEeceec
Q 010191 242 TGFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.++++||+|+++|.+||....
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEe
Confidence 678999999999999998763
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.088 Score=50.75 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=55.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+.+|..+.+. ..+.++++|.|....+ ....-.|+|...++.... .... .+......|
T Consensus 113 ~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 169 (290)
T 3r8q_A 113 VSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYTI 169 (290)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEEE
T ss_pred CCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEEE
Confidence 4566655553 3357899999987632 122346677654332111 0111 111234678
Q ss_pred cCCCCCCEEEEEeceecCCCcccccc--eEEEEcCCCCCCCCceEEEEEee
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKASPYPGQDSLQQVIIFGD 294 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~--~~~F~T~p~~~~~~~~rf~v~gD 294 (515)
+||+|++.|.++|......| .|. ...++|.|.+.. .+++...++
T Consensus 170 ~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~p~~P~--~l~~~~~~~ 215 (290)
T 3r8q_A 170 TGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDAPS--NLRFLATTP 215 (290)
T ss_dssp CSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCCCE--EEEEEEEET
T ss_pred CCCCCCCEEEEEEEEEeCCc---ccCCEEEEecCCCCCCC--ccEEEeeCC
Confidence 99999999999998763222 233 345566654322 355544443
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.013 Score=48.27 Aligned_cols=84 Identities=12% Similarity=-0.013 Sum_probs=46.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
|.+|..+.+. ..+.++++|.|..... ....+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~-~g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDH-IGAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSS-CCSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCC-CCCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4455555442 3357899999987542 11222 45565543332221110 011123
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccc
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
..+++||+|+++|.|||......|...+|+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 457899999999999998764334333443
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.054 Score=44.54 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=52.1
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|...++ ...+.+++.|+|.-... .-..-.|+|...++. .. ... .++-.....
T Consensus 7 ~p~~P~~l~v-~~~~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~------~~~---------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEA-KEVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ------EIL---------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE------EEE---------------ECSSCSEEE
T ss_pred CCCCCCceEE-EeccCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE------EEE---------------ECCCccEEE
Confidence 3556665555 23357899999976532 111235777654321 10 000 011234568
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
|+||+|++.|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998763333221 23567888643
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.044 Score=46.76 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=33.2
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...++|+||+|+|.|.++|..-...|...+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765455667888899999754
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.011 Score=59.72 Aligned_cols=67 Identities=18% Similarity=0.173 Sum_probs=42.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhh--hcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (515)
++.++||+|. ....+.++++.. ...|-++++||+++ +|..+ .+-+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG---------------~~~~L~~ll~~~g~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHG---------------QYYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQS--LETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTT---------------CHHHHHHHHHHHCSTTSSCEEECSCCSS-SSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCC---------------CHHHHHHHHHHhCCCCcceEEeCCCcCC-CCCCh--HHHHHHHHHhhhhcCCceE
Confidence 5899999973 235566666653 34577999999995 44422 1222222222 1233589
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.018 Score=58.31 Aligned_cols=68 Identities=18% Similarity=0.270 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCC---CCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~---pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP 361 (515)
.|++++||+|- ....+.++++.... -+.++++||+++ +|..+ .+-+..+..+. ..-.
T Consensus 64 ~ri~viGDIHG---------------~~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~ 125 (335)
T 3icf_A 64 VKISVCGDTHG---------------QFYDVLNLFRKFGKVGPKHTYLFNGDFVD-RGSWS--CEVALLFYCLKILHPNN 125 (335)
T ss_dssp CEEEEECCCTT---------------CHHHHHHHHHHHCCCBTTEEEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTT
T ss_pred ceEEEEecCCC---------------CHHHHHHHHHHcCCCCCCcEEEEeCCccC-CCcCh--HHHHHHHHHHhhhCCCc
Confidence 68999999974 34556667765432 246999999995 44322 11122222221 1234
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++.+.||||..
T Consensus 126 v~llrGNHE~~ 136 (335)
T 3icf_A 126 FFLNRGNHESD 136 (335)
T ss_dssp EEECCCTTSSH
T ss_pred EEEecCchhhh
Confidence 89999999953
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.03 Score=49.16 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=32.0
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..++|+||+|+|.|..||..-...|...+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 4678999999999999998764344456788889999854
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.1 Score=50.16 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=30.8
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
...+|+||+||+.|.++|......| ..+|....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998765445 4578999999975
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.05 Score=45.41 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=52.0
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|...++ ...+.++++|+|....+ .-..-.|+|...++.... .... ++-...+.|+
T Consensus 9 ~pP~~l~~-~~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~~----~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGF-SDVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHSG----QTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEE-ESCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCBC----CEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEE-EEccCCeEEEEeeCCCC-CccEEEEEEEeCCCCcee----EEEc-----------------CCCcCEEEcC
Confidence 45666665 34468999999976532 112336777654332110 0110 1122456899
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
||+|+|+|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999875333322212 3368887433
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.075 Score=44.71 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=50.6
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcce-----ecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTY-----SPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~-----~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+|...++ ...+.++++|+|....+ .-..-.|+|....+.... ........ ++-.-.
T Consensus 11 ~p~~L~v-~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----------------~~~~t~ 71 (112)
T 2cui_A 11 RLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----------------PGTRHS 71 (112)
T ss_dssp CCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----------------ETTCCE
T ss_pred CCCceEE-EeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEEc-----------------CCCcCE
Confidence 3444444 33358999999986532 122457888754331000 00000111 122346
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
++|+||+|||+|..+|......+.. -.-....+|.+.+
T Consensus 72 ~~l~gL~PgT~Y~~~V~A~~~~~~s-~p~~~~~~T~~~~ 109 (112)
T 2cui_A 72 AVLRDLRSGTLYSLTLYGLRGPHKA-DSIQGTARTLSGP 109 (112)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSEE-EEEEEEEECCCCS
T ss_pred EEeCCCCCCCEEEEEEEEEECCccc-CCEEEEEEECCCC
Confidence 7899999999999999876322211 1224456666543
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.33 Score=46.26 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=57.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|..+++ ...+.++++|.|....+ ....-.|+|...++.... ...... +.+-.....
T Consensus 104 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEE-EecCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 4566765554 23357899999987642 122346777654432211 111110 011256778
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccce--EEEEcCCCCCCCCceEEEEEee
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSE--YQFKASPYPGQDSLQQVIIFGD 294 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~--~~F~T~p~~~~~~~~rf~v~gD 294 (515)
|+||+|++.|.++|......| .|.. ..+.|.|.+. ..+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~P--~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDSP--RDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCCC--EEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCCC--CccEEeEecC
Confidence 999999999999998763222 3433 4455554322 2255544443
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.041 Score=45.59 Aligned_cols=91 Identities=12% Similarity=0.122 Sum_probs=54.2
Q ss_pred cCCCCCCCcceeeecC-CCCeEEEEEEeCCC---CC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccC
Q 010191 163 FTNPNAPVYPRLAQGK-VWNEMTVTWTSGYG---IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 163 ~~~~~~P~~~~La~~~-~~~~m~V~W~t~~~---~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~ 236 (515)
..-|.+|....+..-. ..+++.|+|..... .. .-.-.|+|...+...+.. ....
T Consensus 5 ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~~~---------------- 64 (109)
T 1uc6_A 5 SVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VELS---------------- 64 (109)
T ss_dssp SCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EEES----------------
T ss_pred EEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Eecc----------------
Confidence 3456778777776533 46899999988642 00 123467777654432211 0000
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccc---cceEEEE
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIW---SSEYQFK 276 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~w---S~~~~F~ 276 (515)
. .....|.+|+||+.|..||..... |.+.| |+...++
T Consensus 65 ~--~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~WS~~~~~~ 104 (109)
T 1uc6_A 65 N--GTAHTITDAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHAT 104 (109)
T ss_dssp S--CSEEEETTCCSSSCEEEEEECCBS-SSCCCCCCCEEEEEC
T ss_pred c--CCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCcCCCCeeee
Confidence 0 124578999999999999997642 44344 4445544
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.11 Score=47.88 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=56.8
Q ss_pred CCCCCCcceeeecC-----CCCeEEEEEEeCCCCCC--CccEEEEc-cCCCCcceecCcceEEeccccCCCCCccccccC
Q 010191 165 NPNAPVYPRLAQGK-----VWNEMTVTWTSGYGINE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 165 ~~~~P~~~~La~~~-----~~~~m~V~W~t~~~~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~ 236 (515)
.|.+|..+.+.... ..++++|.|........ ..-.|+|. ..+...+... ...
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~---~~~----------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV---FHL----------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE---EEE-----------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEE---ecc-----------------
Confidence 46677666554321 47889999987642100 12356776 4433332211 000
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEcCC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T~p 279 (515)
.+......|.+|+|+|+|.+||......|.. .||+...|+|+.
T Consensus 168 ~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 1123567899999999999999876432332 478888998865
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.22 Score=45.48 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=42.8
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+ ...+.++++|+|....+..-..-.|+|....+.... ..... ++-.....|+|
T Consensus 116 ~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 174 (203)
T 2gee_A 116 PPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 174 (203)
T ss_dssp CCEEEEE-EEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGC---EEEEE-----------------CTTCCEEEECS
T ss_pred CCCceEE-EEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCcc---EEEEc-----------------CCCcCEEEECC
Confidence 4555554 223568999999886421112346777654332100 01111 12234567899
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+|++.|.++|...
T Consensus 175 L~p~t~Y~~~V~A~ 188 (203)
T 2gee_A 175 LLPGTEYVVSVSSV 188 (203)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEe
Confidence 99999999999876
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=95.59 E-value=0.073 Score=50.67 Aligned_cols=92 Identities=12% Similarity=0.101 Sum_probs=55.5
Q ss_pred CCCCCCcceeeecCC-C----CeEEEEEEeCCCCC------CCccEEEEccCCCCcceecCcceEEeccccCCCCCcccc
Q 010191 165 NPNAPVYPRLAQGKV-W----NEMTVTWTSGYGIN------EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVG 233 (515)
Q Consensus 165 ~~~~P~~~~La~~~~-~----~~m~V~W~t~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g 233 (515)
.|.+|..+.+.+... . .++.|.|....... .-.-.|+|..++...+....
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------- 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------- 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-------------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe-------------------
Confidence 567787775443321 2 45999998874210 01235666655433222110
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEeceecCCC--cccccceEEEEcC
Q 010191 234 WRDPGYIHTGFLRELWPNAMYTYKLGHRLFNG--TYIWSSEYQFKAS 278 (515)
Q Consensus 234 ~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg--~~~wS~~~~F~T~ 278 (515)
...-..+.|.+|+||++|..||.....+| -..||+...|+|+
T Consensus 191 ---~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ---PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ---CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ---ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 01124567899999999999999875444 3467788888875
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.076 Score=43.13 Aligned_cols=74 Identities=20% Similarity=0.226 Sum_probs=44.7
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+.+. ..+.++++|+|.-... .-..-.|+|...+..... .... .++-.-..+|
T Consensus 2 p~~P~~l~~~-~~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~-----~~~~---------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVT-NITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE-----TTVD---------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC-----EEEE---------------ECTTEEEEEE
T ss_pred CccCCccEEE-EecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc-----eEEE---------------ECCcceEEEE
Confidence 4556666652 3467899999987632 112246777654321100 0000 0223456789
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
+||+|+|+|.++|...
T Consensus 60 ~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 60 TNLEPNTTYEIRIVAR 75 (100)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999876
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.038 Score=50.80 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=57.2
Q ss_pred CCCCCCcceeeec-CCCCeEEEEEEeCCCCC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQG-KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+... .+.+++.|.|....... ...-.|+|...+...+...... + ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~------~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc------c------------ccCccc
Confidence 4566766666432 25789999998653211 0123566665443222111000 0 012234
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T~p~ 280 (515)
..+|+||+|+|.|.+||......|.. .||+...++|.+.
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 56799999999999999976444443 3677888888753
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.029 Score=56.26 Aligned_cols=68 Identities=16% Similarity=0.226 Sum_probs=41.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP 361 (515)
.|++++||+|.. ...+.++++... ..+.++++||+++ +|..+ .+-+..+..+. ..-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCccC-CCcCh--HHHHHHHHHhhhhcCCc
Confidence 589999999742 345666666532 2356999999995 44322 11122222221 1235
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 89999999963
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.051 Score=50.92 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=55.6
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|..+.+ ...+.++++|+|.-..+ ....-.|+|...+..... ..... +......|+
T Consensus 7 ~~P~~l~~-~~~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~ 63 (234)
T 3f7q_A 7 GAPQNPNA-KAAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVELT 63 (234)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEEC
T ss_pred CCCcceEE-EEcCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEEC
Confidence 45655555 33457899999987632 122346777755432211 01110 112356789
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
||+|+|.|.++|......|...+|....++|..
T Consensus 64 ~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 64 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 999999999999876444555677788898864
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.052 Score=48.61 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=43.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCC---CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
.|.+|..+.+. ..+.+++.|+|....... -..-.|+|...+...+... .. .-..
T Consensus 102 ~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLM-DVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATC-----AT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEE-EECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEE-----EE-----------------ESSS
T ss_pred CCCCCcccEEE-eccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEe-----ec-----------------cccc
Confidence 45566666542 335789999998753211 0123566665443322110 00 0112
Q ss_pred EEEecCCCCCCEEEEEeceec
Q 010191 242 TGFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
...+++|+|++.|.|+|....
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n 179 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQN 179 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEeCCcCCCCEEEEEEEEEe
Confidence 357899999999999999764
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.019 Score=57.24 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=41.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhh--hcCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (515)
+++++||+|.. ...+.++++.. ...+-++++||+++.+.... +-+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~---evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH---HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCCcH---HHHHHHHHHHhhCCCcEE
Confidence 48999999742 45566676653 34577889999995433322 112222222 1223589
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999963
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.028 Score=47.57 Aligned_cols=39 Identities=13% Similarity=-0.000 Sum_probs=32.8
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+|++|+|++.|.+||......|...||+...++|++.
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 457899999999999998775556667899999999865
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.48 E-value=0.065 Score=43.87 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=51.8
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCC--CC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|....+ -..+.+++.|+|..... .+ -..-.|.|...+..... .....+.. +-...+
T Consensus 7 ~P~~~~~-~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-~~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYT-EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDS-DYKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEE-EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGG-GCEEEEEE-----------------TTCSEE
T ss_pred CCceeEE-EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCC-ceEEEEEc-----------------CCceEE
Confidence 3444443 23467899999987531 00 01236778765432100 00011111 111245
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
+|+||+|+|.|.++|..-...|....|+...++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998764455556677777776
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.017 Score=49.00 Aligned_cols=38 Identities=16% Similarity=0.092 Sum_probs=28.4
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccce-EEEEcCCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPYP 281 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~-~~F~T~p~~ 281 (515)
.+.+|+|++.|.|||......|...+|.. ..|+|.+..
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 36799999999999998754555566766 478886543
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.031 Score=46.10 Aligned_cols=84 Identities=14% Similarity=0.098 Sum_probs=46.4
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+. ..+.++++|+|.-...... ..-.|+|...+...+..... .+.....
T Consensus 9 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~~ 67 (111)
T 1x5y_A 9 TSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERCG 67 (111)
T ss_dssp CCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSSE
T ss_pred CcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCcccE
Confidence 4455555442 2357899999987542111 12356666544333221110 0111234
Q ss_pred EEecCCCCCCEEEEEeceecCCCccccc
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS 270 (515)
.++++|+|++.|.|||......|...+|
T Consensus 68 ~~v~~L~p~t~Y~frV~A~n~~G~s~~S 95 (111)
T 1x5y_A 68 FTVKDLPTGARILFRVVGVNIAGRSEPA 95 (111)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCcCCCCc
Confidence 5789999999999999976433333344
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.056 Score=43.48 Aligned_cols=89 Identities=17% Similarity=0.109 Sum_probs=50.4
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|..+.+. ..+.++++|+|..... .-..-.|+|....+.... ..... ++....+.|+
T Consensus 3 ~~P~~l~v~-~~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (98)
T 3teu_A 3 DAPTDLQVT-NVTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTIT 60 (98)
T ss_dssp CCCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEEC
T ss_pred CCCCceEEE-EecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEec
Confidence 345555542 3356899999987632 112236777743321100 00111 1123456799
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
||+|++.|.++|..... .+.|+...+.+.+.
T Consensus 61 ~L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKD---NQESPPLVGTQTTG 91 (98)
T ss_dssp SCCTTCEEEEEEEEEET---TEECCCEEEEEECS
T ss_pred CCCCCCEEEEEEEEEeC---CCCCCCeEEEeccC
Confidence 99999999999987632 23466666665544
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.1 Score=51.20 Aligned_cols=132 Identities=11% Similarity=0.111 Sum_probs=72.2
Q ss_pred cceEEEEEE--eecccceEEEEEec-CCCCceEEEecCcccc-----CCCCCCCcceeeecC-----CCCeEEEEEEeCC
Q 010191 125 GKGSLKLQL--INQRSDFSFVLFTN-GLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGK-----VWNEMTVTWTSGY 191 (515)
Q Consensus 125 g~~s~~~~l--~n~r~~~~f~~~~~-~~~~~~~~a~s~~i~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~t~~ 191 (515)
|..+.+|.. +..-..|.|.+... .+.. ..|..+.| .-|.+|..+.+.... ..+++.|+|....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~----~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~ 233 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENALGT----SMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQ 233 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETTEE----EECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCG
T ss_pred CCcEEEECccccccceeEEEEEEEECCCCC----ccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCC
Confidence 445566654 22335677776543 1110 11222212 236677655543321 4689999998753
Q ss_pred CCCC--CccEEEEc-cCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCcc-
Q 010191 192 GINE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTY- 267 (515)
Q Consensus 192 ~~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~- 267 (515)
.... -.-.|+|. ..+...+.... .. .+..+...|.+|+|+|+|..||......|..
T Consensus 234 ~~~~~~l~Y~v~y~~~~~~~~w~~~~---~~-----------------~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~ 293 (313)
T 2d9q_B 234 PGLHINQKCELRHKPQRGEASWALVG---PL-----------------PLEALQYELCGLLPATAYTLQIRCIRWPLPGH 293 (313)
T ss_dssp GGTTSCEEEEEEEEESSSCCCCEEEE---EE-----------------CSCEEEEEECSCCSCCCEEEEEEEEECSSCCC
T ss_pred CCCceeEEEEEEEccCCCCCCcEEcc---cc-----------------cCcceEEEEeCCCCCCeEEEEEEeeECCCCCc
Confidence 2111 12467777 44433332110 00 1234667899999999999999976433333
Q ss_pred --cccceEEEEcCCC
Q 010191 268 --IWSSEYQFKASPY 280 (515)
Q Consensus 268 --~wS~~~~F~T~p~ 280 (515)
.||+...++|+..
T Consensus 294 wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 294 WSDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCCEEECCCC-
T ss_pred cCCCCCccceeCCcc
Confidence 3778888988753
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.031 Score=46.86 Aligned_cols=92 Identities=10% Similarity=-0.037 Sum_probs=54.6
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.+|..+.+.. ..+++.|+|.-+..... ..-.|+|+.. +..|..... .+ ++-.....
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~--~~-----------------~~~~t~~~ 66 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDP--AV-----------------AGTETELL 66 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEE--EE-----------------CSSCCEEE
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeee--ec-----------------CCCcCEEE
Confidence 4555555533 45789999998753111 1236788763 222321110 01 11233456
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+.+|.||++|.+||..-...|....|+...++|...
T Consensus 67 v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 67 VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 999999999999998764445555566777777654
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.085 Score=47.26 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=54.3
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|..+++ ...+.++++|.|.-..+ .-..-.|+|...++... .... ++-.....
T Consensus 6 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEE-EecCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 3556766665 33457899999987532 12234677764322110 0111 11123457
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccc--eEEEEcCCCCCCCCceEEE
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKASPYPGQDSLQQVI 290 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~--~~~F~T~p~~~~~~~~rf~ 290 (515)
|+||+|++.|.++|.... + .+.|. ...++|.|.+.. .+++.
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~P~--~l~~~ 104 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGSPK--GISFS 104 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCCCS--CEEEE
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCCCC--ccEEE
Confidence 899999999999999763 2 23343 456777665433 25543
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.081 Score=43.96 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++ ...+.+++.|.|......+. ..-.|+|...+.... ...... .+....
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEE-EECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 3455655554 33357899999976542111 123555554432110 000110 123346
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceE
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~ 273 (515)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 6889999999999999876544555566554
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.041 Score=50.27 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=54.5
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+.. +.++++|+|....+... ..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 456777777755 78999999987632111 123567765432 1221100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEeceecCCCccccc-ceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS-SEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS-~~~~F~T~p~ 280 (515)
...+ +|+|++.|.|||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999876444545566 4577888653
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.15 Score=50.71 Aligned_cols=85 Identities=19% Similarity=0.214 Sum_probs=48.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
-|.+|..+.+. ..+.+++.|.|..... ....-.|+|...++... ....+. ++-.....
T Consensus 275 ~p~~P~~l~~~-~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 332 (368)
T 1fnf_A 275 VSDVPRDLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTAT 332 (368)
T ss_dssp CCCSCEEEEEE-EEETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEE
T ss_pred CCCCCCeeEEE-ecCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEEE
Confidence 45566555542 2256899999987642 11233667765433211 001111 11224567
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccc
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
++||+||+.|.|+|......|...+|.
T Consensus 333 ~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 333 ISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp ECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred ecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 899999999999998775445444543
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.076 Score=48.67 Aligned_cols=98 Identities=18% Similarity=0.219 Sum_probs=56.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|..|..+.+ ....++++|.|..... ....+ .|+|...+...+... .+... . ...-
T Consensus 113 ~P~~p~~~~~--~~~~~~~~l~w~~p~~-~~~~pi~~y~v~~~~~~~~~w~~~----~~~~~--------~-----~~~~ 172 (215)
T 3mtr_A 113 TPSSPSIDQV--EPYSSTAQVQFDEPEA-TGGVPILKYKAEWRAVGEEVWHSK----WYDAK--------E-----ASME 172 (215)
T ss_dssp CCCCCEEEEE--EEETTEEEEEEECCSC-CCSSCEEEEEEEEEETTCCCCEEE----EEEHH--------H-----HHHH
T ss_pred CCCCCcceEE--EEecceEEEEEecCCc-cCCCceEEEEEEEEECCCCccccc----ccccc--------c-----cccc
Confidence 3455544444 2346789999985421 11223 367766554333211 11100 0 0001
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~ 282 (515)
....|.+|+|++.|.|||.....-|...+|....|+|+|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456799999999999999887555666778889999988654
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.025 Score=57.63 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=41.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
+++++||+|.. ...+.++++.. ...+-++++||+++ +|..+. +-+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSTTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCccC-CCcChH--HHHHHHHHhhhhcCCcEE
Confidence 48999999743 34556666542 34678999999995 444221 1122222221 123489
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.024 Score=47.66 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=45.2
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCC---CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+. ..+.++++|.|....... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIE-DVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEE-EEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEE-EecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 45677776653 335689999998754211 112357776554333321100 00112
Q ss_pred EEEecCCCCCCEEEEEeceec
Q 010191 242 TGFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
...+++|+|++.|.|||....
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEee
Confidence 346899999999999998763
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.1 Score=47.86 Aligned_cols=103 Identities=9% Similarity=-0.081 Sum_probs=54.5
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+ ...+.++++|.|....+.....-.|+|...+...... ..... +-.....|+|
T Consensus 25 ~P~~l~~-~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~---~~~~~-----------------~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIF---EDFVD-----------------SSVGYYTVTG 83 (203)
T ss_dssp CCEEEEE-ECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCE---EEEEE-----------------TTCCEEEECS
T ss_pred CCCccEE-EecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCce---eEEcC-----------------CCccEEEeCC
Confidence 3433333 2335789999998764211113366676544321100 00110 1123567899
Q ss_pred CCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEee
Q 010191 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD 294 (515)
|+|++.|.++|...... +.|....+++...+..-..+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 335555565543322222355555444
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.083 Score=49.62 Aligned_cols=96 Identities=17% Similarity=0.213 Sum_probs=57.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCC----CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-+.+|.-+++.... .+++.|+|....... .-.-.|+|..++. .+... ...+. .+..
T Consensus 105 k~~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~ 164 (214)
T 2b5i_B 105 RLMAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQ 164 (214)
T ss_dssp CCCCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCC
T ss_pred CCCCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccc
Confidence 34677777775432 468999998864210 0124566765532 12111 11111 1123
Q ss_pred EEEEecCCCCCCEEEEEeceecCCC-c---ccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNG-T---YIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg-~---~~wS~~~~F~T~p~ 280 (515)
+.+.|.+|+||+.|..||......+ . ..||+...|+|.|.
T Consensus 165 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 165 EWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred eEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 4677899999999999999874212 2 36788899999874
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.068 Score=44.30 Aligned_cols=90 Identities=13% Similarity=0.056 Sum_probs=48.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCC-CCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
-|.+|.........+.+++.|+|.... .+..+.-|+... +..+...+... .+. .-
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~---~~~~Y~VyR~~~~~~~~~~i~~~~-------------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAP---GANSYNVKRSTKSGGPYTTIATNI-------------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCT---TCSEEEEEEESSTTCCCEEEEEEE-------------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCC---CCCEEEEEEecCCCCCcEEEeecC-------------------CCC--EE
Confidence 356676555533334579999998753 245555565432 21111111000 001 11
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+.++|+||++|+|+|..-...|....|..-+.++.
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECC
Confidence 35899999999999987543334445555555543
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.062 Score=48.09 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=56.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+++. ..+.++++|.|........ ..-.|+|...+...+.... .. ....
T Consensus 5 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVK-EVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEE-EecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 45667665553 2357899999987632111 1235666654432221110 00 0123
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC-CCCCCCceEEEEEee
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP-YPGQDSLQQVIIFGD 294 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p-~~~~~~~~rf~v~gD 294 (515)
...+++|+|++.|.|+|......|...++....+.|.. .|..-..+++...++
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 45789999999999999876444433445443444432 122222355544443
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.04 E-value=0.045 Score=57.81 Aligned_cols=68 Identities=16% Similarity=0.231 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcC---CCCEEEEcCccccCCCchhHHHHHHHHHhh--hhcCCC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 361 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~---~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~--l~~~vP 361 (515)
.+++++||+|.. ...+.++++... ..|.++++||+++ +|..+ .+-+..+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~vd-rG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEeccccC-CCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999742 345666666532 2356999999995 44322 111222221 122457
Q ss_pred EEEccCCCCCC
Q 010191 362 YMIASGNHERD 372 (515)
Q Consensus 362 ~~~v~GNHE~~ 372 (515)
++.+.||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.11 Score=41.43 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=42.0
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|...++. ..+.++++|+|.-... .-..-.|+|...++.... . +. ...+-...++|+|
T Consensus 4 ~P~~l~~~-~~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~~------~------~~--------~~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIHE------L------FP--------APDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEEE------E------CC--------CCCSSCCEEEECS
T ss_pred CCCccEEE-eecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCce------E------Ee--------cCCCCccEEEeCC
Confidence 46666653 2346899999966531 112235667654321100 0 00 0012234678999
Q ss_pred CCCCCEEEEEeceec
Q 010191 248 LWPNAMYTYKLGHRL 262 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (515)
|+||+.|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998763
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.064 Score=52.33 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=58.2
Q ss_pred CCCCCCcceeee-cCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+.. ..+.+++.|+|........ ..-.|+|...+...+...... + ..+-..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 466777766643 2357899999987642110 123567766543333211100 0 011224
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T~p 279 (515)
...|++|+|+|.|.+||......|.. .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56799999999999999976433433 466788899864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.078 Score=48.51 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=51.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+ ...+.++++|+|........ ..-.|+|... ...+.. .... ++.....
T Consensus 110 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~~~~~~---~~~~-----------------~~~~~~~ 167 (209)
T 2vkw_A 110 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRAL-SSEWKP---EIRL-----------------PSGSDHV 167 (209)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEET-TSCCCC---CEEE-----------------CTTCCEE
T ss_pred CCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEECC-CCCCce---eeec-----------------CCCccEE
Confidence 455554332 23468899999998632111 1235667652 211110 0111 1122345
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
.|+||+|++.|.+||......|...+|+...+++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 7999999999999998775455555666655554
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.12 Score=47.87 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=49.4
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCCC-CCccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
.-|.+|..+++......+++.|.|....... .-.-.|+|...+. ..+... .. ...-..
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~----~~----------------~~~~~~ 167 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMY----EV----------------YDAKSK 167 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEE----EE----------------CC---C
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEE----ec----------------ccCcce
Confidence 3677888887765546789999998764211 0123566665432 122110 00 001123
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccc
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
.+.|.+|+|||+|..||......|...||+
T Consensus 168 ~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 168 SVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp EEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred eEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 577999999999999999875444455664
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.1 Score=49.70 Aligned_cols=97 Identities=20% Similarity=0.179 Sum_probs=59.5
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCCC----CCccEEEEccCC-CCcceecCcceEEeccccCCCCCccccccCCC
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g 238 (515)
.-|.+|..+.+....+.+++.|+|....... .-.-.|+|...+ ...+... .. ..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v----~~-----------------~~ 169 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHV----NL-----------------SS 169 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEE----EE-----------------SS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEE----Ee-----------------cC
Confidence 3577888777766655678999998864211 112356776553 2222110 00 11
Q ss_pred eEEEEEecCCCCCCEEEEEeceecC-CCc---ccccceEEEEcCCCC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLF-NGT---YIWSSEYQFKASPYP 281 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~-dg~---~~wS~~~~F~T~p~~ 281 (515)
....+.+.+|+||++|..||..... .+. ..||....|+|++.+
T Consensus 170 t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 170 TKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred ceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 1234567899999999999987642 122 246778999998653
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.77 E-value=0.037 Score=58.87 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc--CCCCEEEEcCccccCCCchhHHHHHHHHHhhhh--cCCCEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~--~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (515)
+++++||+|-. ...+.++++.. ...|-++++||+++ +|..+ .+-+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq---------------~~dL~~LL~~~g~p~~d~yVFLGDyVD-RGp~S--~Evl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC---------------HHHHHHHHHhcCCCCcceEEEcCCcCC-CCCCH--HHHHHHHHHHhhhCCCeEE
Confidence 48999999742 34555665542 34588999999995 44422 11122222221 123489
Q ss_pred EccCCCCCC
Q 010191 364 IASGNHERD 372 (515)
Q Consensus 364 ~v~GNHE~~ 372 (515)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.70 E-value=0.13 Score=49.46 Aligned_cols=106 Identities=10% Similarity=-0.048 Sum_probs=58.2
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+.+ ...+.++++|.|....+ ....-.|+|...+..... ..... ++-.....|
T Consensus 21 p~~P~~l~~-~~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 78 (290)
T 3r8q_A 21 IPAPTDLKF-TQVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVV 78 (290)
T ss_dssp CCCCEEEEE-EEECSSCEEEEEECCSS-CCCEEEEEEEESSSSSCC---EEEEE-----------------CTTCCEEEE
T ss_pred CCCCCceEE-EECCCCEEEEEEeCCCC-CeeEEEEEEEeCCCCCce---EEEEc-----------------CCCccEEEe
Confidence 345555554 23357899999988632 122346777654322110 00111 112345678
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEee
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD 294 (515)
+||+|++.|.++|......|...++ ...++|.+.+..-..+++...++
T Consensus 79 ~~L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 79 SGLMVATKYEVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp CSCCSSCEEEEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 9999999999999876433433333 45677765443322344444443
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.37 Score=51.10 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=73.3
Q ss_pred ceEEEEEEeecccceEEEEEec-CCCCce-EEEecCccccCCCCCCCcceeeecCCCCeEEEEEEeCCCCC--CCccEEE
Q 010191 126 KGSLKLQLINQRSDFSFVLFTN-GLLNPK-VVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVE 201 (515)
Q Consensus 126 ~~s~~~~l~n~r~~~~f~~~~~-~~~~~~-~~a~s~~i~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~ 201 (515)
..+..|........|.|.+-.. ++..-. .+.. .......|.+|..+++. ..+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~-~~~~~VkP~PP~nl~v~-~~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILV-NITEKVYPHTPTSFKVK-DINSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEE-CGGGGBCCCCCEEEEEC-CSSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEE-EeccccCCCCCeeeEEE-EecCCeEEEEECCCCCCCCceEEEEEE
Confidence 3455666554455677766542 222100 0011 11112356677766653 235789999998764211 0234788
Q ss_pred EccCCCCc-ceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCc---ccccceEEEEc
Q 010191 202 WGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKA 277 (515)
Q Consensus 202 yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~---~~wS~~~~F~T 277 (515)
|...+... +.. .++. + ...-.+.+.|.+|+|+|+|..||... .++. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~------------~--~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ------------G--VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB------------C--CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe------------c--cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 87664431 111 0110 0 00112345789999999999999987 4444 45778889998
Q ss_pred CCC
Q 010191 278 SPY 280 (515)
Q Consensus 278 ~p~ 280 (515)
+.+
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.49 E-value=0.076 Score=49.94 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=56.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+++......+++.|.|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4667887777654457899999988643100 12356666543322211 0000 01123
Q ss_pred EEEecCCCCCCEEEEEeceecCC----Cc-ccccceEEEEcC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFN----GT-YIWSSEYQFKAS 278 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~d----g~-~~wS~~~~F~T~ 278 (515)
.+.|.+|+||+.|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999987311 21 457888899984
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=94.48 E-value=0.12 Score=47.35 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=50.6
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|...++ ...+.++++|.|..... .-..-.|+|...+.... ....+. ++-...++|+
T Consensus 105 ~~P~~l~v-~~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEV-VAATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEE-EEEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEE-EeCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 34555554 33357899999976532 11223567765433210 000111 1122467899
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEc
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
||+|+|+|.++|..-...|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999864444444565555543
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=94.34 E-value=0.15 Score=41.43 Aligned_cols=75 Identities=16% Similarity=0.223 Sum_probs=43.3
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCC-CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINE-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
.+|...++ ...+.++++|.|........ ..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v-~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEV-VAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEE-EEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEE-eecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 35666665 23357899999987541001 123577775433210 000111 111246789
Q ss_pred cCCCCCCEEEEEeceec
Q 010191 246 RELWPNAMYTYKLGHRL 262 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (515)
+||+||+.|.++|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998763
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.2 Score=42.48 Aligned_cols=89 Identities=19% Similarity=0.120 Sum_probs=48.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++... . ++++|+|.-....+. ..-.|+|.... .. ..... .++-....
T Consensus 28 P~~P~~l~~~~~-~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~------~~~~~---------------~~~~~~~~ 83 (126)
T 1x5i_A 28 PEVPSSLHVRPL-V-TSIVVSWTPPENQNIVVRGYAIGYGIGS-PH------AQTIK---------------VDYKQRYY 83 (126)
T ss_dssp CCSCSEEEEEEE-T-TEEEEEEECCSCTTBCCCEEEEEECSSC-GG------GEEEE---------------CCTTCCEE
T ss_pred CCCCCeeEEEec-C-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CC------ceEEE---------------eCCCeeEE
Confidence 455666665433 3 899999987642110 12245665311 10 00000 01223456
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
+|++|+|++.|.++|......|...++.. .++|.+
T Consensus 84 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~ 118 (126)
T 1x5i_A 84 TIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRP 118 (126)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCccCcceee-EEeccc
Confidence 79999999999999987643343333432 455543
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.14 E-value=2.1 Score=46.90 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=31.4
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcccccce---EEEEcCCC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE---YQFKASPY 280 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~---~~F~T~p~ 280 (515)
....++|+||+|++.|.+||......|...+|.. ..++|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987644454455655 77888654
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.11 E-value=0.14 Score=50.91 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=50.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+.+....+.++++|.|....+..-..-.|+|...++..... ..... .+......|
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45676666643333446999998864211123467776543321100 00001 112345689
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
++|+|++.|.|+|...... +.|...+..+.+
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~ 93 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIP 93 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecC
Confidence 9999999999999876322 345444444444
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.11 E-value=0.2 Score=45.75 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=50.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+.+|..+++. ..+.++++|+|.-...... ..-.|+|...+. ..+........+.. +... ...+-...
T Consensus 2 ~~pP~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~~~---~~~~~~~~ 71 (214)
T 2ibg_A 2 TYPPTPPNVT-RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PKWN---SELGKSFT 71 (214)
T ss_dssp CCCCCCCEEE-EEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SSCS---SSSEEEEE
T ss_pred CCCCCCCEee-EecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cccc---cccCccee
Confidence 4567777763 3367899999987643110 112466665432 22222111111100 0000 01134567
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccc
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
..+++|+|++.|.|||......|...+|.
T Consensus 72 ~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~ 100 (214)
T 2ibg_A 72 ASVTDLKPQHTYRFRILAVYSNNDNKESN 100 (214)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCEEECC
T ss_pred EEecCCcCCCEEEEEEEEEecCCCCCCCC
Confidence 78999999999999998753333333343
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.14 Score=43.36 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=43.7
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|...++. ..+.+++.|.|.-... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEE-EECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEE-ecCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 3456666553 3457899999977532 11223666765433210 000110 112346789
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
+||+|||.|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999876
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=93.99 E-value=0.26 Score=48.61 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=54.0
Q ss_pred CCCCCCcceeeecC-CCCeEEEEEEeCCCCCCC----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 165 ~~~~P~~~~La~~~-~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
-|.+|..+.+.... +.+++.|+|......... .-.|+|+..+...+..... .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~---------------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV---------------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC---------------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc---------------------cCC
Confidence 46677766665433 357999999887531111 2356776654333321100 011
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCccc---ccceEEEEc
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKA 277 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~---wS~~~~F~T 277 (515)
-....|.+|+|++.|.+||......|... ||+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 13567899999999999999774334333 455555554
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=93.69 E-value=0.22 Score=40.32 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=41.1
Q ss_pred CCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 010191 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (515)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL 248 (515)
|....+ ...+.++++|+|....+ .-..-.|+|...+.... ....... +-.-.++|+||
T Consensus 5 P~~l~v-~~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~~-----------------~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVV-SEVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTVP-----------------GSERSYDLTGL 62 (98)
T ss_dssp CEEEEE-ESCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEEE-----------------TTCSEEEECSC
T ss_pred CCceEE-EecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEcC-----------------CCcCEEEECCC
Confidence 444443 23368899999987642 11123577776532110 0001111 11235689999
Q ss_pred CCCCEEEEEecee
Q 010191 249 WPNAMYTYKLGHR 261 (515)
Q Consensus 249 ~Pgt~Y~Yrv~~~ 261 (515)
+|+|.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999876
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.67 E-value=0.26 Score=44.61 Aligned_cols=89 Identities=19% Similarity=0.298 Sum_probs=49.9
Q ss_pred CCCcceeee-cCCCCeEEEEEEeCCCCCCCccEEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 168 APVYPRLAQ-GKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 168 ~P~~~~La~-~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+|..+.+.. +...++++|.|....+..-..-.|+|...+.. .+. .... ++-.....|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATI-----------------PGHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCE----EEEE-----------------CTTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceE----EEec-----------------CCCccEEEe
Confidence 355555422 12378999999886321122346777754321 111 1111 111235689
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+||+|++.|.++|......|...++ ...|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEE-EEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCce-eEEEecC
Confidence 9999999999999876433433332 4566664
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.049 Score=44.69 Aligned_cols=76 Identities=18% Similarity=0.279 Sum_probs=43.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
.|.+|...++. ..+.+++.|.|..... .-..-.|+|......... .... .++-...++
T Consensus 7 ~p~~P~~l~v~-~~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~~---~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALA-SETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGPE---KSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEE-EEETTEEEEEEECCSS-CCSBBCBBCCCTTSCSCC---CCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEE-eCCCCEEEEEEeCCCC-cceEEEEEEEECCCCCcc---EEEE-----------------eCCCcCEEE
Confidence 45567666652 3357899999987632 112234556543221100 0000 012234568
Q ss_pred ecCCCCCCEEEEEeceec
Q 010191 245 LRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~ 262 (515)
|+||+|+|.|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998763
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.22 E-value=0.25 Score=52.43 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=74.1
Q ss_pred cceEEEEEEeecccceEEEEEec-CCCCceEEEecCcccc-----CCCCCCCcceeeecCCCCeEEEEEEeCCCCCC--C
Q 010191 125 GKGSLKLQLINQRSDFSFVLFTN-GLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--A 196 (515)
Q Consensus 125 g~~s~~~~l~n~r~~~~f~~~~~-~~~~~~~~a~s~~i~~-----~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~ 196 (515)
+..+.+|.+...-..|.|.+..- ++.. ..| .+.| .-|.+|..+++. ..+.+++.|+|........ -
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~----~~S-~~~~~~~~~v~P~PP~nl~v~-~~s~~sl~LsW~pP~~~~g~~l 418 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ----AQS-AVVINVTERVAPHDPTSLKVK-DINSTVVTFSWYLPGNFTKINL 418 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE----EEE-EEECCGGGTBCCCCCEEEEEE-ECSTTCEEEEEEEEEECSSSEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC----ccc-eEEEEecCCCCCCCCeEEEEE-ecCCCEEEEEEeCCCCCCCcce
Confidence 34556666554335677776542 2211 111 1112 245667666652 3467899999987632110 1
Q ss_pred ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEeceecCCCc---ccccceE
Q 010191 197 EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEY 273 (515)
Q Consensus 197 ~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~---~~wS~~~ 273 (515)
.-.|+|...+...+.. ..+.. + .....+.+.|.+|+|+|+|..||.... .|. ..||+..
T Consensus 419 ~YeV~Yr~~~~~~w~~---~~~~~------------~--~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v 480 (488)
T 2q7n_A 419 LCQIEICKANSKKEVR---NATIR------------G--AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEK 480 (488)
T ss_dssp EEEEEEBCTTSCCEEE---EEEEE------------C--CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCC
T ss_pred EEEEEEEECCCCCceE---EEEEe------------c--CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCE
Confidence 2346666554322210 01110 0 012356779999999999999999775 555 3677888
Q ss_pred EEEcCCC
Q 010191 274 QFKASPY 280 (515)
Q Consensus 274 ~F~T~p~ 280 (515)
.|+|++.
T Consensus 481 ~~~T~e~ 487 (488)
T 2q7n_A 481 RHLTTEA 487 (488)
T ss_dssp CBCCCCC
T ss_pred eEECCCC
Confidence 8998763
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.20 E-value=0.35 Score=46.09 Aligned_cols=106 Identities=14% Similarity=0.068 Sum_probs=58.3
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
-|.+|..+.+. ..+.++++|.|.-... ....-.|+|+........ ..... ++......
T Consensus 14 ~p~~P~~l~~~-~~~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILVR-DVSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEEE-ecCCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 34567666552 3356899999987641 112346777543221100 00111 11234567
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCCCCCCCCceEEEEEeec
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDM 295 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~~~~~~~rf~v~gD~ 295 (515)
|++|+|++.|.++|......|... .....|+|+|.+.. .+++...++.
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P~--~l~~~~~~~~ 119 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAPK--NLRVGSRTAT 119 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCE--EEEEEEECSS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCCC--ceEEEecCCC
Confidence 899999999999999763222211 23456777765432 3555554443
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.31 Score=45.99 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=25.5
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+++||+|+|.|.|+|.....+|...-++...+||.
T Consensus 203 t~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 203 TFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 58999999999999997755554433355666653
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.17 E-value=0.18 Score=41.17 Aligned_cols=75 Identities=21% Similarity=0.364 Sum_probs=44.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCC--CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+.+|...++. ..+.++++|.|......+ -..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~-~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVV-DATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEE-EEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEE-ecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 4567776662 345789999997654210 1122677775432110 000111 1123467
Q ss_pred EecCCCCCCEEEEEecee
Q 010191 244 FLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~ 261 (515)
+|+||+|++.|.++|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999876
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=93.14 E-value=0.21 Score=41.84 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=43.7
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|...++. ..+.++++|.|....+ .-..-.|+|...++... ...... ++..-.++|
T Consensus 4 P~~P~~L~v~-~~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVV-AATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEE-EEETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4556555552 2357899999987632 11234677876543210 001111 112345789
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
+||+|||.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.12 Score=41.71 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=44.3
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+.+|...++. ..+.++++|.|....+ .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVV-AATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEE-EEETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4567766662 3357899999976532 11223677765433210 000111 122345789
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
+||+|++.|.++|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.1 Score=55.81 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=58.4
Q ss_pred CCCCCCcceeee-cCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+.. ....++++|+|........ ..-.|+|...+...+...... ...+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~------------------~~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------------------DTASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT------------------SSCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc------------------cCcCcee
Confidence 467787777643 3457899999986532110 123566665543332211000 0012234
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T~p~ 280 (515)
...+++|+|++.|.+||......|.. .||+...++|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 56789999999999999976444443 3467777888653
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.98 E-value=0.26 Score=46.18 Aligned_cols=98 Identities=12% Similarity=0.191 Sum_probs=57.2
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCC-------CCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCC
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGI-------NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~ 237 (515)
-|.+|..+.+. ..+.+.|.|...... ..-.-.|+|...+. .+.......... ..
T Consensus 100 kp~PP~nltv~---~~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVT---FSGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------VD 160 (219)
T ss_dssp CCCCCEEEEEE---ESSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC---------------SS
T ss_pred EeCCCCceEEE---eCCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe---------------cC
Confidence 56778765554 246899999986421 01134567766543 221110000000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEeceecCCCc---c---cccceEEEEcCCCC
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT---Y---IWSSEYQFKASPYP 281 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~---~---~wS~~~~F~T~p~~ 281 (515)
+....+.+.+|.||+.|..||......|. + .||+...|+|++..
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 23456678999999999999987743321 2 46788999998753
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.75 E-value=0.15 Score=42.46 Aligned_cols=40 Identities=23% Similarity=0.144 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..++|+||+|+|.|.++|......|...+|+...|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765455556888899999754
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.63 E-value=0.3 Score=40.59 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=43.0
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++... + ++++|+|.-....+. ..-.|+|....... ..... ++-...
T Consensus 17 ~P~~P~~l~~~~~-~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQ-T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEEC-S-SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEEC-C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 3556777776443 4 899999987632110 12356665422110 00111 112245
Q ss_pred EEecCCCCCCEEEEEeceec
Q 010191 243 GFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.+|+||+|+++|.++|....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 67899999999999998763
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.62 E-value=0.88 Score=36.82 Aligned_cols=83 Identities=19% Similarity=0.400 Sum_probs=50.7
Q ss_pred CCcceeeecC-CCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccC---CCeEEEEE
Q 010191 169 PVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD---PGYIHTGF 244 (515)
Q Consensus 169 P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~---~g~~h~a~ 244 (515)
|.|+-++-+. ..++-.|.|.......-..-.+.|+.+.... -|++ ++.+..-+
T Consensus 8 pa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g-----------------------~Wke~~Ip~h~nSYt 64 (98)
T 1oww_A 8 PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVG-----------------------RWKEATIPGHLNSYT 64 (98)
T ss_dssp CCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSS-----------------------CCEEEEECSSCCEEE
T ss_pred ceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCC-----------------------ceeEEEecCccceEE
Confidence 4544443333 3789999999874210012344455432210 1222 56677778
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccc--eEEEEc
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKA 277 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~--~~~F~T 277 (515)
|+||+||..|.=+|-+.. ..+|++ .+.|.|
T Consensus 65 I~GL~P~~~YE~qv~S~~---ryG~~Evs~f~FtT 96 (98)
T 1oww_A 65 IKGLKPGVVYEGQLISIQ---QYGHQEVTRFDFTT 96 (98)
T ss_dssp ECSCCSSEEEEEEEEEEE---SSSCEEEEEEEEEE
T ss_pred EecCCCCcEEEEEEEEee---ccCcccceEEEEEe
Confidence 999999999999998863 356775 456655
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=92.42 E-value=0.47 Score=47.22 Aligned_cols=89 Identities=13% Similarity=0.018 Sum_probs=48.8
Q ss_pred CCCCcceeeecCCCC-eEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 167 NAPVYPRLAQGKVWN-EMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 167 ~~P~~~~La~~~~~~-~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
.+|..+.+.. .+.+ +++|.|..........-.|+|...++...... .... ++......|
T Consensus 4 ~~P~~l~~~~-~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~--~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEA-NPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSL--EEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEE-ETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCE--EEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEe-cCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcce--eEEc-----------------CCCccEEEE
Confidence 3455555533 2456 99999987642111223677765433211000 0011 112245678
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+||+|++.|.|+|..... .++|.....++.
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~ 93 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTII 93 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEEC
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEc
Confidence 999999999999987632 234655555543
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.93 E-value=1.2 Score=37.88 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=55.2
Q ss_pred EeeCCCceEEEccc--ccccCCCcccEEEEEEecC-CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCCcCCCceeEEcc
Q 010191 39 FALDDNAYIKASPS--ILGMKGQNSDWLTVEYNSP-NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYAN 115 (515)
Q Consensus 39 ~~~~~~~~~~~~p~--~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 115 (515)
|..++..+|++|-. +||. +|.++|.|.-- .-.+.||||+|--.. +||. ..+.|+--
T Consensus 29 vt~~sRSsLt~S~~~ytiG~----~q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~knR- 87 (138)
T 2lfe_A 29 VTSESRSSLTASMYEYTLGQ----AQNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKNR- 87 (138)
T ss_dssp ----CCCEEEESCSEEETTC----SCCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECCT-
T ss_pred ecccccceeEEEeeEEEecC----CCcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhcc-
Confidence 33456667777654 5553 35699999984 778999999997643 3332 11222211
Q ss_pred cCCCccccccceEEEEEEe------ecccceEEEEEecCCCCceEEEecCccccCCC
Q 010191 116 YSSPQYKSTGKGSLKLQLI------NQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNP 166 (515)
Q Consensus 116 ~~~~~~~~~g~~s~~~~l~------n~r~~~~f~~~~~~~~~~~~~a~s~~i~~~~~ 166 (515)
+-..+=+|.+.-++= .-+.-+-|.+..+-.. .|-|.++.|+..||
T Consensus 88 ----gvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 88 ----GVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp ----TCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred ----ccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 111222344433321 1223455776665333 47788888887775
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=91.84 E-value=0.25 Score=51.46 Aligned_cols=87 Identities=20% Similarity=0.352 Sum_probs=49.8
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
..|...|+ ...+.++++|.|..+.+..-..-.|+|.+++.... ....+. ++--.+++|+
T Consensus 371 ~~~~~l~~-~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEV-VAATPTSLLISWDASYSSSVSYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEE-EEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEE-eccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc---ceEEEe-----------------cCCCceEEec
Confidence 45677776 44467899999977521011134677766642110 000110 1123668999
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEE
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F 275 (515)
||+|||+|..+|...... -...|....|
T Consensus 430 ~L~p~t~Y~~~v~a~~~~-~g~~s~~~~~ 457 (461)
T 3csg_A 430 GLSPGVDYTITVYAYSYY-YYYYSSPISI 457 (461)
T ss_dssp SCCTTCEEEEEEEEECTT-SCBCSCCEEE
T ss_pred CCCCCCEEEEEEEEEecc-CCCCCCCEEE
Confidence 999999999999976322 1234554444
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.78 E-value=1.3 Score=43.93 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=50.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
+.+|..+.+ ...+.++++|.|..........-.|+|...+.... ...... .+-.....+
T Consensus 187 ~~~p~~l~~-~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 245 (375)
T 3t1w_A 187 VPPPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVL 245 (375)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEEE
T ss_pred CCCCceeEE-EecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEEe
Confidence 345655554 23457999999987532112234667765432110 000111 112245678
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+||+|++.|.++|......|.... ....++|.|.
T Consensus 246 ~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 246 TNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 999999999999987643332221 2344566554
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.85 E-value=0.72 Score=41.70 Aligned_cols=90 Identities=14% Similarity=-0.021 Sum_probs=50.5
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCC--CC--CCccEEEEccCCCCc-ceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~--~~--~~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+|..+++ ...+.+++.|+|..... .+ -..-.|+|...+... +.. .... ......
T Consensus 107 ~P~~~~~-~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~----~~~~----------------~~~~~~ 165 (205)
T 1cfb_A 107 NPDNVVG-QGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNIF----------------DWRQNN 165 (205)
T ss_dssp CCSCCEE-ECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEEC----------------CTTCCE
T ss_pred CCeeeEe-ecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEE----EEec----------------CCCccE
Confidence 4544454 33457899999986531 00 112366666544321 110 0000 112245
Q ss_pred EEecCCCCCCEEEEEeceecCCCccc-ccceEEEEcC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKAS 278 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~-wS~~~~F~T~ 278 (515)
.+|+||+|++.|.+||......|... +|+...++|.
T Consensus 166 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 166 IVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 67899999999999998764444444 3556666664
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=90.44 E-value=1.7 Score=43.04 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=54.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|.+|..+.+ .....+++.|.|..... ..+.+ .|+|...+...+.. .. ..+..
T Consensus 195 ~P~~P~~~~~-~~~~~~~~~l~w~~p~~-~~g~pi~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKI-IELSQTTAKVSFNKPDS-HGGVPIHHYQVDVKEVASEIWKI------VR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSC-CTTSCEEEEEEEEEETTCSCCEE------EE---------------CSTTC
T ss_pred CCCCCcceEE-eeccCCEEEEEEeCCCC-CCCcceEEEEEEEEECCCcccEE------ee---------------ccCCc
Confidence 3445544443 22346899999985422 11223 45666554332211 00 01122
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
....|.+|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998764445556677888888653
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=90.07 E-value=0.78 Score=44.86 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=56.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
-|.+|..+++. ...+++.|.|........ -.-.|+|...+...+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~--~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLS--FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEE--EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEE--EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 46677776665 345799999988742111 12356776654433211 0110011211000 001123567
Q ss_pred EEecCCCCCCEEEEEeceecC------CCc-ccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLF------NGT-YIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~------dg~-~~wS~~~~F~T~p 279 (515)
..|.+|+|+++|.+||..... .|. ..||+...|.+.+
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 789999999999999997742 232 3566777776543
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.97 E-value=0.75 Score=42.05 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=52.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
-|.+|....+... ..+.+.|.|........-.-.|+|+..++..+... .. .......
T Consensus 98 kP~pP~~l~~~~~-~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~----~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEE-ETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEE
T ss_pred ecCCCcEEEEEEC-CCCCEEEEECCCCCCCceEEEEEEeecCCcccEEE----ec------------------cCceEEE
Confidence 4677876666543 24799999998742111234688876544333221 00 0113456
Q ss_pred ecCCCCCCEEEEEeceecCC---Ccc---cccceEEEEcC
Q 010191 245 LRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKAS 278 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~d---g~~---~wS~~~~F~T~ 278 (515)
|.+|+|+++|..||...... ... .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 79999999999999987422 122 35566667664
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=89.71 E-value=7.7 Score=36.59 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=38.9
Q ss_pred CCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEec
Q 010191 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLG 259 (515)
Q Consensus 180 ~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~ 259 (515)
.++++|+|.-... ....-.|+|...+..... ...+... ..+......++||+|++.|.++|.
T Consensus 114 ~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~ 175 (290)
T 3l5i_A 114 DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC----ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVT 175 (290)
T ss_dssp TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC----CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEE
T ss_pred CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC----CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEE
Confidence 3699999987643 122346777654332110 0001000 012234566899999999999998
Q ss_pred eecCCC
Q 010191 260 HRLFNG 265 (515)
Q Consensus 260 ~~~~dg 265 (515)
.....|
T Consensus 176 A~n~~g 181 (290)
T 3l5i_A 176 PVYADG 181 (290)
T ss_dssp EEETTE
T ss_pred EEeCCc
Confidence 764333
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.34 E-value=3.1 Score=45.68 Aligned_cols=95 Identities=13% Similarity=0.009 Sum_probs=53.3
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCC----CCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGI----NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
.+|..+.+ ...+.++++|+|.-.... ....-.|+|............ .... ..++....
T Consensus 361 ~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~---~~~~-------------~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEV-VEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE---EVSW-------------DTENSHPQ 423 (731)
T ss_dssp CCCEEEEE-EEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEE---EEEC-------------CSSCSSCE
T ss_pred CCCceeEE-EeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccce---eEEE-------------EecCCcce
Confidence 45655544 233578999999875210 001235777654322111000 0000 01122345
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..|++|+|++.|.++|......|.. .|....++|..
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~ 459 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDE 459 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccC
Confidence 6899999999999999876444443 47788888864
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.00 E-value=1.2 Score=42.53 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=54.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
-|.+|....+... ..+.+.|.|........-.-.|+|+..++..+... .. .......
T Consensus 136 kP~PP~nl~v~~~-~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~----~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEES-SSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE----EE------------------CSSCEEE
T ss_pred EeCCCCeEEEEEC-CCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE----ec------------------CCceEEE
Confidence 4677876666543 34799999998742111123577776544333221 00 0112456
Q ss_pred ecCCCCCCEEEEEeceecCC---Ccc---cccceEEEEcCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKASPY 280 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~d---g~~---~wS~~~~F~T~p~ 280 (515)
|.+|+|+++|..||...... ... .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 79999999999999987422 122 4667788887643
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=88.68 E-value=0.74 Score=42.52 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=48.7
Q ss_pred CCCCCCCcceeeecCCCCeEEEEEEeCCCC-C----CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCC
Q 010191 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGI-N----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (515)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~t~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g 238 (515)
.-|.+|....+... ..+...|+|...... . .-.-.|+|+..+...... .... ...+
T Consensus 96 Vkp~PP~nl~~~~~-~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-----~~~~-------------~~~~ 156 (207)
T 1iar_B 96 VKPRAPGNLTVHTN-VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNV-------------TYLE 156 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEE-------------CSSC
T ss_pred cccCCCCCeEEEEc-cCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-----eeee-------------ecCC
Confidence 35777877666532 346899999887421 0 012456776543321100 0100 0123
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEcCCC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T~p~ 280 (515)
......+.+|.||++|..||........+ .||+...|+|.+.
T Consensus 157 ~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 157 PSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred cEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 34556678999999999999987422222 4677899998764
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=88.67 E-value=0.65 Score=50.19 Aligned_cols=73 Identities=14% Similarity=0.206 Sum_probs=48.3
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCc----cEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAE----PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|.+|..|.+ ...+.++++++|.-... +.+. -.||+...++..|...+. + ++ .
T Consensus 9 ~P~pP~~P~v-~~~~~~sv~L~W~~P~~-DGgs~I~~Y~vE~~~~~~~~W~~v~~--~----------------~~--t- 65 (573)
T 3uto_A 9 EPEPPRFPII-ENILDEAVILSWKPPAL-DGGSLVTNYTIEKREAMGGSWSPCAK--S----------------RY--T- 65 (573)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSC-CSSSCCCEEEEEEEESSSCCCEEEEE--E----------------SS--S-
T ss_pred CCccCCCCEE-EEeeCCEEEEEECCCCc-CCCCcccEEEEEEEECCCCceEEecc--c----------------cC--C-
Confidence 4667877765 33357899999987532 1222 367888777766654321 1 01 1
Q ss_pred EEEEecCCCCCCEEEEEecee
Q 010191 241 HTGFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
..+++||.||+.|.|||...
T Consensus 66 -~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 66 -YTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp -EEEECCCCTTCEEEEEEEEE
T ss_pred -EEEeCCCCCCCcEeEEEEEE
Confidence 24689999999999999976
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=88.67 E-value=0.92 Score=37.78 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=29.6
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.+.+. |+|++.|.+||..-...|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45566 99999999999877555666788888999864
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=88.38 E-value=2.5 Score=43.09 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=54.4
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCC--------ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccC
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--------EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~--------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~ 236 (515)
-|.+|..+.+.... +.+.|+|......... .-.|+|+..+ ..+... .+.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~---~~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDA---AILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTC---EEEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhe---eeec---------------c
Confidence 56778777765543 6999999987532100 1355665543 222111 0100 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCC---Ccc---cccceEEEEcCCCC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKASPYP 281 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~d---g~~---~wS~~~~F~T~p~~ 281 (515)
....+...+.+|.|+++|..||...... +.. .||+...|+|++..
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~ 217 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 217 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc
Confidence 1122333344999999999999976421 222 46688999998754
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=88.35 E-value=0.27 Score=40.05 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=37.8
Q ss_pred CCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEe
Q 010191 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKL 258 (515)
Q Consensus 179 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv 258 (515)
+.++++|.|....+ .-..-.|+|....+... ..... -+|-.-.+.|+||+|||+|.-.|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 47899999987642 11234667765433210 00011 12334567899999999999998
Q ss_pred cee
Q 010191 259 GHR 261 (515)
Q Consensus 259 ~~~ 261 (515)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.05 E-value=1.9 Score=47.35 Aligned_cols=36 Identities=17% Similarity=0.305 Sum_probs=25.0
Q ss_pred EEEecCCCCCCEEEEEeceecCCCccc-ccceEEEEc
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKA 277 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~-wS~~~~F~T 277 (515)
.++|++|+|++.|.|||......|..+ .+....|+|
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t 260 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRS 260 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEc
Confidence 467899999999999998764334222 234456666
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.12 E-value=2.2 Score=38.97 Aligned_cols=39 Identities=23% Similarity=0.169 Sum_probs=31.1
Q ss_pred EEEecCCCCCCEEEEEeceecC--CCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLF--NGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~--dg~~~wS~~~~F~T~p~ 280 (515)
.++|.+|+|+|.|..+|..... .+...||+..-|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986532 45567888899998763
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.34 E-value=0.33 Score=38.18 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
||-.+.-+|+||.||.+|.=|+.+-...+... ...+.|+|.
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g~~E-vtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTSCCC-EEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecccCC-ceEEEEEec
Confidence 55566667999999999999988754323211 235666654
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=85.44 E-value=3.2 Score=44.49 Aligned_cols=42 Identities=12% Similarity=-0.017 Sum_probs=30.4
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCc---ccccceEEEEcCCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKASPYP 281 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~---~~wS~~~~F~T~p~~ 281 (515)
...++|++|+|+|.|.++|......|. ..++....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 356789999999999999987632232 234667888887654
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=85.39 E-value=1.3 Score=50.43 Aligned_cols=40 Identities=15% Similarity=0.056 Sum_probs=30.5
Q ss_pred EEEEecCCCCCCEEEEEece-ecCCCc----ccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGH-RLFNGT----YIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~-~~~dg~----~~wS~~~~F~T~p~ 280 (515)
...+|++|+|+|+|.|||.. -...|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 55789999999999999987 322333 45788888998653
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.20 E-value=4.1 Score=39.80 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=30.0
Q ss_pred EEEEecCCCCCCEEEEEeceec--CCCcccccceEEEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~--~dg~~~wS~~~~F~T~p 279 (515)
...+|.+|+|+|.|..+|..-. ..|...+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3568999999999999998653 23555678888888853
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.46 E-value=7.6 Score=42.53 Aligned_cols=40 Identities=13% Similarity=-0.045 Sum_probs=30.6
Q ss_pred EEEEecCCCCCCEEEEEecee--cCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHR--LFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~--~~dg~~~wS~~~~F~T~p~ 280 (515)
...+|++|+|++.|.|+|... ...|...+|....++|.+.
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 456789999999999999865 4445556777788888653
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.73 E-value=1.1 Score=41.99 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=28.5
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..++++|+|++.|.|||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999977544555677778887754
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=83.25 E-value=4.2 Score=41.38 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEeceecCCC--cc---cccceEEEEc
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNG--TY---IWSSEYQFKA 277 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg--~~---~wS~~~~F~T 277 (515)
..+.|.+|+|||.|..||......| .+ .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 3568999999999999999774332 22 4667777765
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=83.20 E-value=12 Score=37.75 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=29.3
Q ss_pred EEEecCCCCCCEEEEEeceec--CCCcccccceEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~--~dg~~~wS~~~~F~T~p 279 (515)
..+|.+|.|++.|..+|.... ..|...+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999998763 13445678887888854
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.52 E-value=5.9 Score=36.86 Aligned_cols=35 Identities=6% Similarity=-0.015 Sum_probs=24.8
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
+.+|+|++.|.|||......|...+|++..+.+++
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999999877544555567766666544
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.04 E-value=2.6 Score=37.84 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=19.0
Q ss_pred EEEEecCCCCCCEEEEEeceec
Q 010191 241 HTGFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
....|+||+||+.|.++|....
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEc
Confidence 4568999999999999998763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 515 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 3e-33 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-17 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-16 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 3e-16 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 4e-06 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 1e-05 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 7e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 126 bits (317), Expect = 3e-33
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 25/235 (10%)
Query: 281 PGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN 340
G D + GD+G+ S T K V +GD+ YA+
Sbjct: 2 TGLDVPYTFGLIGDLGQSFD------------SNTTLSHYELSPKKGQTVLFVGDLSYAD 49
Query: 341 GYIS----QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENM 396
Y + +WD + E + P++ +GNHE ++ + ++
Sbjct: 50 RYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY----RYHV 105
Query: 397 FYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLA 456
Y +++ + FWYS + + + GT QY +++ L V R + PWLI L
Sbjct: 106 PYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 165
Query: 457 HRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511
H L S + + R + + KYKVD+ GHVH YER +
Sbjct: 166 HSPLYNSYNHHF-----MEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSN 215
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 81.4 bits (199), Expect = 1e-17
Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 18/237 (7%)
Query: 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQW 346
+ GD G G + + + +K D + +GD Y G
Sbjct: 7 FVAVGDWG-----GVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK 61
Query: 347 D-QFTAQIE-----PIASTVPYMIASGNHERDW-PGTGSFYGNMDSGGECGVLVENM-FY 398
D +F E P VP+ + +GNH+ Y + + F
Sbjct: 62 DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFK 121
Query: 399 VPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHR 458
+P N + + D D E LA + +Q
Sbjct: 122 IPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDY 178
Query: 459 VLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHHV 515
VL +++ + L L +KV + GH HN + + V
Sbjct: 179 VLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFV 235
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 73.0 bits (179), Expect = 2e-16
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 22/121 (18%)
Query: 163 FTNP---NAPVYPRLAQG-KVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLT 218
F P NAP + QG V M ++W + V + + R G ++
Sbjct: 10 FRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEP--GSSAVRYWSEKNGRKRIAKGKMS 67
Query: 219 FGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278
G+IH +R+L N Y Y++ G + + F
Sbjct: 68 ----------TYRFFNYSSGFIHHTTIRKLKYNTKYYYEV------GLRNTTRRFSFITP 111
Query: 279 P 279
P
Sbjct: 112 P 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 72.7 bits (178), Expect = 3e-16
Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 23/131 (17%)
Query: 150 LNPKVVAVSNKVTFTNPNAPVYPRLAQG-KVWNEMTVTWTSGYGINEAEPFVEWGPKGGD 208
+ V AV + NAP + QG + ++WT+ Y V + +
Sbjct: 11 WDSDVFAVPS-----GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSK 64
Query: 209 RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYI 268
GT+ +IH +++L + Y Y+LG
Sbjct: 65 SQKRAMGTVV----------TYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGD------ 108
Query: 269 WSSEYQFKASP 279
++ F P
Sbjct: 109 AKRQFWFVTPP 119
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 46.3 bits (108), Expect = 4e-06
Identities = 36/277 (12%), Positives = 74/277 (26%), Gaps = 64/277 (23%)
Query: 292 FGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQF 349
+ D+ D + + RGS + R + + + V +GDI +G+ + D
Sbjct: 14 YADIE-DGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDI--IDGHNRRRDAS 70
Query: 350 TAQIEPIAST-----VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404
++ + + V GNH ++ + +
Sbjct: 71 DRALDTVMAELDACSVDVHHVWGNH--EFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDD 128
Query: 405 AKFWYSTDYGMFRFCIADT----------------------------------------- 423
+ + FRF + D
Sbjct: 129 IYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGL 188
Query: 424 -----EQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPM 478
+ + +Q ++++ L D +++ LIF V ++D
Sbjct: 189 EQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD------PICLAWN 242
Query: 479 GRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHHV 515
L L V + GH H+ R H+
Sbjct: 243 HEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHI 279
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 44.3 bits (103), Expect = 1e-05
Identities = 16/193 (8%), Positives = 44/193 (22%), Gaps = 19/193 (9%)
Query: 311 RGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368
G L + ++ D + IG++ + F + Y+ G
Sbjct: 15 MGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVP--GP 72
Query: 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWR 428
+ + + ++ M V G+ + E +
Sbjct: 73 QDAPI------WEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH 126
Query: 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQ 488
E ++ + + + + Y G + L +
Sbjct: 127 EALRYPAWVAEYRLKALWELKDYPKIFLFHTMPY---------HKGLNEQGSHEVAHLIK 177
Query: 489 KYKVDIAVFGHVH 501
+ + +
Sbjct: 178 THNPLLVLVAGKG 190
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/187 (13%), Positives = 43/187 (22%), Gaps = 19/187 (10%)
Query: 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTG 377
QL + D V GDI G ++ + + P + GNH+
Sbjct: 33 SQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSLN--YPLYLIPGNHDDKALFLE 89
Query: 378 SFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFI 437
+ ++ D+ I + +G I
Sbjct: 90 YLQ-------------PLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETI 136
Query: 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVF 497
A + H A A G L + + +
Sbjct: 137 SWLEAQLFEGGDKPATIFMHHPPLPLG---NAQMDPIACENGHRLLALVERFPSLTRIFC 193
Query: 498 GHVHNYE 504
GH H+
Sbjct: 194 GHNHSLT 200
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.8 bits (86), Expect = 0.002
Identities = 16/216 (7%), Positives = 49/216 (22%), Gaps = 35/216 (16%)
Query: 312 GSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--------- 360
+ +L + DI+ +G+I ++++ V
Sbjct: 13 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 72
Query: 361 ---------------PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRA 405
+ G ++ F + + R
Sbjct: 73 ETLDKFFREIGELGVKTFVVPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRG 129
Query: 406 KFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSD 465
+F G+ + + + +I + + ++ + + + +
Sbjct: 130 EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRL---VTIFYTPP--IGE 184
Query: 466 LSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501
+ ++A+ GHV
Sbjct: 185 FVDRTPEDPKHHGSAVVNTIIK-SLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 515 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.92 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.85 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.82 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.81 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.79 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.77 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.54 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.52 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.79 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.66 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.6 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.53 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.51 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.43 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.36 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.97 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.88 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.85 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.73 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.73 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.43 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.41 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.4 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.39 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.38 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.35 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.35 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.33 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.32 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.3 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.26 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.25 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.24 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.17 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.16 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.1 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 97.09 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.07 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.05 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.05 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.04 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 97.04 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.98 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.97 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.95 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.93 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.92 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.92 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.92 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.9 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.88 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.82 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.79 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.76 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.75 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.71 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.69 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.66 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.64 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.58 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.57 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.56 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.54 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.53 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.53 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.53 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.51 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.47 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.44 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.43 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.4 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.34 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.28 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.26 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.26 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.2 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.19 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.18 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.12 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.08 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.04 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.03 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.02 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.99 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.98 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.96 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.86 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.82 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.61 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.46 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 95.42 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.38 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.25 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.22 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.2 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 94.51 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 94.38 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 93.95 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.88 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 93.2 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.01 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 92.14 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 91.85 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 91.04 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 90.75 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 90.48 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 89.57 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 88.23 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 86.11 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 82.41 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.2e-42 Score=348.50 Aligned_cols=209 Identities=30% Similarity=0.473 Sum_probs=172.3
Q ss_pred CCCCceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc----hhHHHHHHHHHhhhh
Q 010191 282 GQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIA 357 (515)
Q Consensus 282 ~~~~~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i~~l~ 357 (515)
|++.++||+++||+|... ...+++..+.....+||||||+||++|+++. ..+||+|++.++++.
T Consensus 3 g~~~p~~F~v~GD~g~~~------------~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~ 70 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSF------------DSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 70 (312)
T ss_dssp CSSCCEEEEEECSCCSBH------------HHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCCCC------------chHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHh
Confidence 446789999999997642 1345566655555789999999999997653 568999999999999
Q ss_pred cCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCC---CCCceEEEEEeCCEEEEEEcCCCCcCCCHHHH
Q 010191 358 STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQY 434 (515)
Q Consensus 358 ~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~g~~Q~ 434 (515)
+.+|+|+++||||+++.. .....++..++..+|.||.+ ...+.||+|++|++|||+||++..+..+++|+
T Consensus 71 ~~~P~~~~~GNHD~~~~~-------~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~ 143 (312)
T d2qfra2 71 AYQPWIWTAGNHEIEFAP-------EINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQY 143 (312)
T ss_dssp TTSCEEECCCGGGTCCBG-------GGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHH
T ss_pred hcceEEEecccccccccc-------cccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHH
Confidence 999999999999986422 11223556677888999864 34577999999999999999999888899999
Q ss_pred HHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 435 ~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
+||+++|++++|+++||+||++|+|+ |++...+..+ .+.+ |+.|++||.+|+||++|+||+|.|||+|||++++|
T Consensus 144 ~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~~---~~~~-r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~ 218 (312)
T d2qfra2 144 TWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFME---GEAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 218 (312)
T ss_dssp HHHHHHHHTCCTTTCCEEEEECSSCS-SCCBSTTTTT---THHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHHHHHHhhcCCCEEEEEccccc-cccCCCCccc---chhH-HHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcc
Confidence 99999999998889999999999999 8875432211 2344 89999999999999999999999999999999886
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=5.9e-26 Score=223.84 Aligned_cols=197 Identities=17% Similarity=0.247 Sum_probs=127.6
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc----hhHHHHHHHHH--hhhhcC
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQI--EPIAST 359 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~----~~~wd~f~~~i--~~l~~~ 359 (515)
.+||+++||+|......... ..+......+.+.+++ .+|||||++||++|..|. ..+|.+.++.+ ......
T Consensus 4 ~~~F~vigD~g~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 80 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred CeEEEEEecCCCCCCccccc--HHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcC
Confidence 39999999998665422111 0000011222333332 689999999999997664 34455444333 223468
Q ss_pred CCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEe------CCEEEEEEcCCCC-------
Q 010191 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY------GMFRFCIADTEQD------- 426 (515)
Q Consensus 360 vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~------- 426 (515)
+|+|+++||||....... .+.......++.+|. .||++.+ +.++|+++|+...
T Consensus 81 ~P~~~~~GNHD~~~~~~~---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~ 146 (302)
T d1utea_ 81 VPWHVLAGNHDHLGNVSA---------QIAYSKISKRWNFPS-----PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDF 146 (302)
T ss_dssp CCEEECCCHHHHHSCHHH---------HHHGGGTSTTEECCS-----SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGS
T ss_pred CceEEeeccccccccccc---------ccchhhccccccCCC-----cccceeecccCCCCcEEEEEccceeEeeccccc
Confidence 999999999997522110 000011122333432 3566654 3699999997521
Q ss_pred ----------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEE
Q 010191 427 ----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAV 496 (515)
Q Consensus 427 ----------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~Vdlvl 496 (515)
...+++|++||+++|++ .+.+|+|+++|+|+ |+...+ + ..... ++.|++||.+++|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~-~~~~~~-~----~~~~~-~~~~~~ll~~~~v~~~~ 216 (302)
T d1utea_ 147 VSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPV-WSIAEH-G----PTHCL-VKQLLPLLTTHKVTAYL 216 (302)
T ss_dssp TTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCS-SCCSSS-C----CCHHH-HHHTHHHHHHTTCSEEE
T ss_pred ccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccc-cccCCC-C----Cchhh-hhhhhHHHHhcCceEEE
Confidence 01236899999999998 46789999999998 876432 1 11233 88999999999999999
Q ss_pred eCccccccccccc
Q 010191 497 FGHVHNYERICPI 509 (515)
Q Consensus 497 sGH~H~YeRt~p~ 509 (515)
+||+|.|+|+.+.
T Consensus 217 ~GH~H~~~r~~~~ 229 (302)
T d1utea_ 217 CGHDHNLQYLQDE 229 (302)
T ss_dssp ECSSSSEEEEECT
T ss_pred eCCCcceEEEecC
Confidence 9999999998653
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.85 E-value=3.8e-21 Score=186.47 Aligned_cols=191 Identities=17% Similarity=0.184 Sum_probs=124.5
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHH----HhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhc--C
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI----QDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--T 359 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~----~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~--~ 359 (515)
.+||+.++|+|..... ...|... ...+.+++++ +...+||||+++||++. .|...+|+.+.+.++++.+ .
T Consensus 4 ~~~i~~iSD~Hl~~~~-~~~~~~~--~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~-~g~~~~~~~~~~~l~~~~~~~~ 79 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGD-RRLYGAV--DADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQLG 79 (256)
T ss_dssp SEEEEEECCCCBC-------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS-SCCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEeeCccCCCC-cccccCc--CHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCChhHHHHHHHHhhhhhhhcC
Confidence 4999999999986532 1222111 1123334333 33458999999999994 5666778888777776543 6
Q ss_pred CCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc----CCCHHHHH
Q 010191 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYR 435 (515)
Q Consensus 360 vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q~~ 435 (515)
+|+++++||||.... +...+..........+|+++.++++|++|||.... ....+|++
T Consensus 80 ~p~~~v~GNHD~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~ 141 (256)
T d2hy1a1 80 AELVWVMGNHDDRAE------------------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141 (256)
T ss_dssp CEEEECCCTTSCHHH------------------HHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHH
T ss_pred CCEEEEcccccchhh------------------hhhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHH
Confidence 899999999995310 01111111112234568899999999999987532 24579999
Q ss_pred HHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 436 FIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 436 WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
||++.|++. ... .+|+++|+|+ +............ . .++.+..++++++|+++|+||+|...+
T Consensus 142 wl~~~L~~~--~~~-~~iv~~Hhpp-~~~~~~~~~~~~~--~-~~~~~~~i~~~~~v~~~~~GH~H~~~~ 204 (256)
T d2hy1a1 142 WLAEELATP--APD-GTILALHHPP-IPSVLDMAVTVEL--R-DQAALGRVLRGTDVRAILAGHLHYSTN 204 (256)
T ss_dssp HHHHHHTSC--CTT-CEEEECSSCS-SCCSSHHHHTTSB--C-CHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred HHHHHHHhh--hcc-CceeeeecCC-ccccccccccccc--c-cHHHHHHHHhccCceEEEccccchhhc
Confidence 999999874 233 4788899998 6543211111111 1 166889999999999999999998653
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.82 E-value=3e-20 Score=182.04 Aligned_cols=192 Identities=13% Similarity=0.116 Sum_probs=123.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh----cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~----~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (515)
.+|+.++|+|...... ..+... .....++++++. .++||+|+++|||++ .+...+|+.+.+.++.+ .+|+
T Consensus 1 M~i~hiSD~Hl~~~~~-~~~~~~--~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~ 74 (271)
T d3d03a1 1 MLLAHISDTHFRSRGE-KLYGFI--DVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (271)
T ss_dssp CEEEEECCCCBCSTTC-CBTTTB--CHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCcCCCCcc-ccccCc--CHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCE
Confidence 3799999999865421 112111 112233333332 357999999999995 45666777777777765 7899
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCCc----CCCHHHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIE 438 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~g~~Q~~WL~ 438 (515)
++++||||...... . .+...+...........|.++.++++|++|||.... ....+|++||+
T Consensus 75 ~~i~GNHD~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~ 140 (271)
T d3d03a1 75 YLIPGNHDDKALFL-E-------------YLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (271)
T ss_dssp EEECCTTSCHHHHH-H-------------HHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred EEEecCccchHHHH-H-------------HhhhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHH
Confidence 99999999741100 0 000011111112234567889999999999997542 24689999999
Q ss_pred HHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhc-CCeEEEeCccccccc
Q 010191 439 HCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYER 505 (515)
Q Consensus 439 ~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeR 505 (515)
++|++. ++.+ +|+++|+|+ +............ .. .+.|.++|+++ +|+++|+||+|....
T Consensus 141 ~~L~~~--~~~~-~iv~~Hh~p-~~~~~~~~d~~~~--~~-~~~l~~~l~~~~~v~~vl~GH~H~~~~ 201 (271)
T d3d03a1 141 AQLFEG--GDKP-ATIFMHHPP-LPLGNAQMDPIAC--EN-GHRLLALVERFPSLTRIFCGHNHSLTM 201 (271)
T ss_dssp HHHHHH--TTSC-EEEEESSCS-SCCSCTTTGGGSB--TT-THHHHHHHHHCTTEEEEEECSSSSCEE
T ss_pred HHHhhh--ccce-eEEEeccCc-cccCccccccccc--cc-hHHHHHHHHhcCCeEEEEeCCcchhhc
Confidence 999885 3445 667778877 5543211111111 11 56889999998 699999999997653
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.81 E-value=7.8e-20 Score=155.78 Aligned_cols=99 Identities=25% Similarity=0.416 Sum_probs=78.2
Q ss_pred ccCCC---CCCCcceeeecCC-CCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcc-eEEeccccCCCCCccccccC
Q 010191 162 TFTNP---NAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 162 ~~~~~---~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~t~g~~~ 236 (515)
.|.+| ++|+|+||+++++ .++|+|+|+|... ...+.|+||.+++.....+.+. .+|. .++.+
T Consensus 9 ~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~--~~~~~V~yg~~~~~~~~~a~~~~~~~~-----------~~~~~ 75 (112)
T d2qfra1 9 VFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYR-----------FFNYS 75 (112)
T ss_dssp GGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCEEEEEESSSCCCEEEECEEECCB-----------CSSCB
T ss_pred cccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC--CCCcEEEEEECCCCCCcEEEEEEEEEE-----------ecccC
Confidence 46666 7899999999986 6999999999753 4679999999877654433322 2222 24456
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.+++|+|+|+||+|||+|+||||++ .||++++|+|+|
T Consensus 76 ~~~~h~v~Lt~L~P~T~Y~YrVG~~------~~S~~~~F~T~P 112 (112)
T d2qfra1 76 SGFIHHTTIRKLKYNTKYYYEVGLR------NTTRRFSFITPP 112 (112)
T ss_dssp CCEEEEEEECSCCTTCEEEEEECCS------SSCEEEEEECCC
T ss_pred CcEEEEEEECCCCCCCEEEEEECCC------CceeeEEEEcCC
Confidence 8899999999999999999999863 489999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.79 E-value=2.5e-19 Score=154.23 Aligned_cols=97 Identities=20% Similarity=0.334 Sum_probs=76.3
Q ss_pred CCCCCCcceeeecCC-CCeEEEEEEeCCCCCCCccEEEEccCCCCcceec-CcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSP-AGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
+.++|.|+||+++++ .++|+|+|+|..+ ..+.+.|+||..++.....+ +.+.+|+... ...+++|+
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~-~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~-----------~~~~~~H~ 88 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYD-KAGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIHH 88 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSC-CTTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEEE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCC-CCCCCEEEEcCCCCCCccEEEEEEEEeeccc-----------ccCCeEEE
Confidence 347899999999986 7999999999754 24567999998877655443 3334444322 24689999
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
|+|+||+|||+|+||||++ +||++|+|+|+|
T Consensus 89 v~LtgL~P~T~Y~YrVG~~------~~S~~~~F~T~P 119 (119)
T d1xzwa1 89 CTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPP 119 (119)
T ss_dssp EEECCCCTTCEEEEEECCG------GGCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEeCCC
Confidence 9999999999999999863 489999999987
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.77 E-value=1.4e-18 Score=169.18 Aligned_cols=209 Identities=17% Similarity=0.196 Sum_probs=122.1
Q ss_pred ceEEEEEeecCCCCCCCCCcc----cccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-----chhHHHHHHHHHh
Q 010191 286 LQQVIIFGDMGKDEADGSNEY----NNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-----YISQWDQFTAQIE 354 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y----~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-----~~~~wd~f~~~i~ 354 (515)
.|||++++|+|.+........ ......+...++++++. ..+|||||++||+++... ....|+.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 399999999998643211111 11111234455555443 368999999999996421 1223444444444
Q ss_pred hhhcCCCEEEccCCCCCCCCCCCC-CCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC-------
Q 010191 355 PIASTVPYMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------- 426 (515)
Q Consensus 355 ~l~~~vP~~~v~GNHE~~~~~~g~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------- 426 (515)
.+ .+|++.++||||........ .....+............. ........+.+..++++|+.+++...
T Consensus 83 ~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (320)
T d2nxfa1 83 AC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDL---IGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREE 157 (320)
T ss_dssp TT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEEC---GGGTCCCEEEEEETTEEEEECCTTSBCSSSSCT
T ss_pred Hc--CCCEEEecccCccccccchhcccccccchhhhcccccccc---cCCCCccceeecCCCeEEEEecCcccccccccc
Confidence 32 79999999999974211000 0000000000000000000 01123345678899999999987531
Q ss_pred ---------------------------------------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCC
Q 010191 427 ---------------------------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS 467 (515)
Q Consensus 427 ---------------------------------------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~ 467 (515)
...+.+|++||+++|+++.++ ..++|+++|+|+ +.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~-~~~viv~~H~p~-~~~~~~ 235 (320)
T d2nxfa1 158 ESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAAD 235 (320)
T ss_dssp TSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSSC
T ss_pred cccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhc-CCceEEEECCCC-ccCCCC
Confidence 012578999999999886533 346899999998 544321
Q ss_pred CccCCCCCchhhHHHHHHHHHhc-CCeEEEeCcccccccc
Q 010191 468 YAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (515)
Q Consensus 468 ~~~~~~~~~~~~r~~l~~Ll~k~-~VdlvlsGH~H~YeRt 506 (515)
.. .. .. ..+++..+|.+| +|+++|+||.|.+++.
T Consensus 236 ~~--~~--~~-~~~~~~~~l~~~~~V~~v~~GH~H~~~~~ 270 (320)
T d2nxfa1 236 PI--CL--AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRC 270 (320)
T ss_dssp GG--GS--CT-THHHHHHHHHTCTTEEEEEECSCTTCEEE
T ss_pred Cc--cc--hh-hHHHHHHHHHhCCCeeEEEeCCcCCcCee
Confidence 11 11 11 167899999998 5999999999987754
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.54 E-value=1.2e-14 Score=135.63 Aligned_cols=176 Identities=13% Similarity=0.111 Sum_probs=109.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
=+|+++||+|-+ ++.++++++. ..++|+|+++||++.......++..+.+.+..+ .+|+++
T Consensus 6 ~~i~~~sd~hg~---------------~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~ 68 (228)
T d1uf3a_ 6 RYILATSNPMGD---------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred cEEEEEeCCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEE
Confidence 368899999643 4556666543 258999999999996555555666666666554 789999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCCC----------cCCCHHHH
Q 010191 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WREGTEQY 434 (515)
Q Consensus 365 v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~~g~~Q~ 434 (515)
++||||...... +. ..+......+........+.+..+++.++.++.... .....+|.
T Consensus 69 i~GNHD~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 69 VPGPQDAPIWEY---LR---------EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp ECCTTSCSHHHH---HH---------HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred EecCCCchhhhh---hh---------hhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 999999631100 00 000000000000001112456777888887765321 11236888
Q ss_pred HHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 435 ~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
+|+++.|+.. ...+ .|+++|.|+ +.....+ .+.+.+..++++++++++++||+|...
T Consensus 137 ~~l~~~l~~~--~~~~-~il~~H~p~-~~~~~~~---------~~~~~~~~~~~~~~~~lvl~GH~H~~~ 193 (228)
T d1uf3a_ 137 EYRLKALWEL--KDYP-KIFLFHTMP-YHKGLNE---------QGSHEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp HHHHGGGGGS--CSCC-EEEEESSCB-CBTTTBT---------TSBHHHHHHHHHHCCSEEEECCSSCEE
T ss_pred HHHHHHHhhc--cCCc-eEEEEeeec-cCccccc---------cccHHHHHHHHhcCCcEEEEcccccch
Confidence 9999988874 2334 788889987 5432111 113467788899999999999999753
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.52 E-value=3.8e-14 Score=134.34 Aligned_cols=188 Identities=13% Similarity=0.105 Sum_probs=103.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHH-----------------
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQ----------------- 348 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~----------------- 348 (515)
+.|+++++|+|... ..++.+..++++ .+||+|+++||+++.......|..
T Consensus 2 ~~ri~~isD~h~~~------------~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (257)
T d2yvta1 2 PRKVLAIKNFKERF------------DLLPKLKGVIAE-KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 68 (257)
T ss_dssp CCEEEEEECCTTCG------------GGHHHHHHHHHH-HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred CcEEEEEeCCCCCH------------HHHHHHHHHHhh-cCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeecccc
Confidence 37999999998532 234455555554 689999999999964322222221
Q ss_pred ------HHHHHhhhh-cCCCEEEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEE
Q 010191 349 ------FTAQIEPIA-STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIA 421 (515)
Q Consensus 349 ------f~~~i~~l~-~~vP~~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~L 421 (515)
+...++.+. ..+|+++++||||...... .. ..+......+..........+..+++.|+.+
T Consensus 69 n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (257)
T d2yvta1 69 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIF--LR----------AAYEAETAYPNIRVLHEGFAGWRGEFEVIGF 136 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHH--HH----------HHHHTTTTCTTEEECSSEEEEETTTEEEEEE
T ss_pred ccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhHH--HH----------HhccccccccccccccceeEEecCCeEEEEe
Confidence 112223332 2789999999999631100 00 0000000000000011123344566777776
Q ss_pred cCCCCcC---------CCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCC
Q 010191 422 DTEQDWR---------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKV 492 (515)
Q Consensus 422 dt~~~~~---------~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~V 492 (515)
++..... ....+..|++..++. .+....|+++|+|+ +.+....... .....+.+.+..+++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp-~~~~~~~~~~--~~~~~g~~~l~~~l~~~~~ 210 (257)
T d2yvta1 137 GGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPP-IGEFVDRTPE--DPKHHGSAVVNTIIKSLNP 210 (257)
T ss_dssp CSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCC-SCSSTTCBTT--BSCCCSCHHHHHHHHHHCC
T ss_pred ccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEcccc-cccccccccc--chhhhhhHHHHHhhhhcCC
Confidence 6532111 123444555555554 34455899999998 6543211111 1112235688999999999
Q ss_pred eEEEeCcccccc
Q 010191 493 DIAVFGHVHNYE 504 (515)
Q Consensus 493 dlvlsGH~H~Ye 504 (515)
+++++||+|...
T Consensus 211 ~~~~~GHiH~~~ 222 (257)
T d2yvta1 211 EVAIVGHVGKGH 222 (257)
T ss_dssp SEEEECSSCCEE
T ss_pred cEEEEEeecCCe
Confidence 999999999643
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.79 E-value=1.3e-08 Score=99.11 Aligned_cols=84 Identities=13% Similarity=0.198 Sum_probs=53.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCC-chhHHHHHHHHHhhhhc-CCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g-~~~~wd~f~~~i~~l~~-~vP~ 362 (515)
.||++++|+|.+.+.... ..........++++++. ..++|+|+++||+++... .......+.+.++.+.. .+|+
T Consensus 1 Mkilh~SDlHlG~~~~~~--~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v 78 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHK--PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPV 78 (333)
T ss_dssp CEEEEECCCCBTCCGGGC--HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEecCcCCCCCcCc--hhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcE
Confidence 489999999987531000 00011123455555543 268999999999996432 22333445556666543 6999
Q ss_pred EEccCCCCCC
Q 010191 363 MIASGNHERD 372 (515)
Q Consensus 363 ~~v~GNHE~~ 372 (515)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (333)
T d1ii7a_ 79 FAIEGNHDRT 88 (333)
T ss_dssp EEECCTTTCC
T ss_pred EEeCCCCccc
Confidence 9999999975
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.66 E-value=1.2e-09 Score=102.85 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=45.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-------cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-------LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-------~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
++|+++||+|.. ...+++++++ ..++|.|+++||+++. |... .+..+.+..+..+
T Consensus 1 v~I~visDiHg~---------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~-G~~~--~evi~~l~~l~~~ 62 (251)
T d1nnwa_ 1 VYVAVLANIAGN---------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGL-FPYP--KEVIEVIKDLTKK 62 (251)
T ss_dssp CEEEEEECCTTC---------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS-SSCH--HHHHHHHHHHHHH
T ss_pred CEEEEEEccccC---------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC-CCCc--HHHHHHHHHHhhc
Confidence 479999999832 2334444332 2357999999999954 4322 3445666666556
Q ss_pred CCEEEccCCCCC
Q 010191 360 VPYMIASGNHER 371 (515)
Q Consensus 360 vP~~~v~GNHE~ 371 (515)
.++++++||||.
T Consensus 63 ~~v~~v~GNHD~ 74 (251)
T d1nnwa_ 63 ENVKIIRGKYDQ 74 (251)
T ss_dssp SCEEEECCHHHH
T ss_pred CCEEEEeccHHH
Confidence 689999999995
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.60 E-value=3e-07 Score=84.07 Aligned_cols=64 Identities=22% Similarity=0.421 Sum_probs=42.1
Q ss_pred EEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEccCC
Q 010191 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (515)
Q Consensus 289 f~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~GN 368 (515)
++++||+|...+.. .....+.++++. .++|.|+|+||++. + +..+.++.+ .-+++++.||
T Consensus 6 IlviSD~H~~~~~~---------~l~~~~~~~~~~-~~vD~ii~~GDi~~---~-----~~l~~l~~l--~~~v~~V~GN 65 (193)
T d2a22a1 6 VLLIGDLKIPYGAK---------ELPSNFRELLAT-DKINYVLCTGNVCS---Q-----EYVEMLKNI--TKNVYIVSGD 65 (193)
T ss_dssp EEEECCCCTTTTCS---------SCCGGGHHHHHC-TTCCEEEECSCCCC---H-----HHHHHHHHH--CSCEEECCCT
T ss_pred EEEEeCCCCCcccc---------hhhHHHHHHhcc-CCCCEEEECCCCCC---H-----HHHHHHHhh--CCCEEEEcCC
Confidence 89999999754311 111234555553 68999999999983 1 233444444 3468999999
Q ss_pred CCCC
Q 010191 369 HERD 372 (515)
Q Consensus 369 HE~~ 372 (515)
||..
T Consensus 66 ~D~~ 69 (193)
T d2a22a1 66 LDSA 69 (193)
T ss_dssp TCCS
T ss_pred CCcc
Confidence 9975
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.53 E-value=4e-07 Score=82.98 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=45.2
Q ss_pred EEEEeecCCCCCCC--CCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 289 VIIFGDMGKDEADG--SNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 289 f~v~gD~g~~~~~g--~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
+.++||+|.+...- ...+..+..-....+++..+...+.|.|+++||+++..+...+ +.+.++.+. -..+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~---~~~~l~~L~--g~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNE---YLRIWKALP--GRKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTS---HHHHHHHSS--SEEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHH---HHHHHHHCC--CceEEEe
Confidence 56799999864320 0111112111112333333335678999999999976544333 334444443 3468999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 79 GNHD~~ 84 (188)
T d1xm7a_ 79 GNHDKD 84 (188)
T ss_dssp CTTCCC
T ss_pred cCCCch
Confidence 999975
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.51 E-value=4.1e-07 Score=82.48 Aligned_cols=66 Identities=14% Similarity=0.301 Sum_probs=42.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEcc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v~ 366 (515)
.|++++||+|.+.+.. .....+.++++. .++|.|+|+||++. .+-.+.++.+ ..|++.+.
T Consensus 1 MkI~viSD~H~~~~~~---------~l~~~~~~~~~~-~~~D~Ii~~GDi~~--------~e~l~~l~~~--~~~v~~V~ 60 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCN---------SLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 60 (182)
T ss_dssp CEEEEECCCCBTTTCS---------SCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred CEEEEEeecCCCCcch---------hhHHHHHHHhcc-cCCCEEEEccCccc--------hhhHHHHHhh--CCceEEEe
Confidence 3799999999754310 011233344332 47999999999983 1223444444 34789999
Q ss_pred CCCCCC
Q 010191 367 GNHERD 372 (515)
Q Consensus 367 GNHE~~ 372 (515)
||||..
T Consensus 61 GN~D~~ 66 (182)
T d1z2wa1 61 GDFDEN 66 (182)
T ss_dssp CTTCCC
T ss_pred CCcCcc
Confidence 999974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.43 E-value=5.7e-07 Score=79.82 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=40.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
.|+++++|+|.+ ...++++++. ..++|.|+++||++.. . -.+.+.. ...|++.
T Consensus 1 MkI~iiSDiHgn---------------~~al~~vl~~~~~~~~D~ii~~GD~~~~----~----~~~~l~~--~~~~~~~ 55 (165)
T d1s3la_ 1 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFEN--LNANIIA 55 (165)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGG--CSSEEEE
T ss_pred CEEEEEEeCCCC---------------HHHHHHHHHHHHhcCCCEEEECCCccCH----H----HHHHHhh--cCccEEE
Confidence 389999999843 2333344332 2689999999999831 1 1122222 2578999
Q ss_pred ccCCCCCC
Q 010191 365 ASGNHERD 372 (515)
Q Consensus 365 v~GNHE~~ 372 (515)
+.||||..
T Consensus 56 v~GN~D~~ 63 (165)
T d1s3la_ 56 TYGNNDGE 63 (165)
T ss_dssp ECCTTCCC
T ss_pred Eccccccc
Confidence 99999974
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.36 E-value=2.7e-06 Score=76.13 Aligned_cols=57 Identities=21% Similarity=0.219 Sum_probs=40.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEEc
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~v 365 (515)
.||++++|+|.+ ...++++++. ..++|.|+|+||+.+..... ...++.++
T Consensus 4 ~kI~viSD~Hgn---------------~~al~~vl~~~~~~~D~iih~GD~~~~~~~~--------------~~~~~~~V 54 (173)
T d3ck2a1 4 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELRPDSP--------------LWEGIRVV 54 (173)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSCTTCG--------------GGTTEEEC
T ss_pred CEEEEEeccCCC---------------HHHHHHHHHHhhcCCCEEEECCcccCcccch--------------hhcCCeEE
Confidence 799999999843 2445555543 35799999999998543221 12478899
Q ss_pred cCCCCCC
Q 010191 366 SGNHERD 372 (515)
Q Consensus 366 ~GNHE~~ 372 (515)
.||||..
T Consensus 55 ~GN~D~~ 61 (173)
T d3ck2a1 55 KGNMDFY 61 (173)
T ss_dssp CCTTCCS
T ss_pred ecCcccc
Confidence 9999974
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=2.2e-05 Score=77.53 Aligned_cols=89 Identities=18% Similarity=0.220 Sum_probs=47.9
Q ss_pred ceEEEEEeCCEE--EEEEcCCCCc-------------CCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCcc
Q 010191 406 KFWYSTDYGMFR--FCIADTEQDW-------------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV 470 (515)
Q Consensus 406 ~~~Ysfd~G~v~--fi~Ldt~~~~-------------~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~ 470 (515)
..|.-++.++++ ||.+-+.... ....+..+-..+.|++. .+...+|++.|.+. ......
T Consensus 128 ~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~-~~d~~~--- 201 (337)
T d1usha2 128 KPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGH-YDNGEH--- 201 (337)
T ss_dssp BSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCC-CGGGCC---
T ss_pred cceeeeecCCeEEEeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCc-cccccc---
Confidence 346667888855 4666543210 01123333333445432 35667999999886 321110
Q ss_pred CCCCCchhhHHHHHHHHHhcCCeEEEeCccccc
Q 010191 471 EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (515)
Q Consensus 471 ~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~Y 503 (515)
... .+ +...+...+...+||+++.||.|..
T Consensus 202 -~~~-~~-~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 202 -GSN-AP-GDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp -TTS-CC-CHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred -ccc-cc-hhHHHHHhCcccCceEEecCccCcc
Confidence 000 11 1234444444568999999999975
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.88 E-value=6e-05 Score=73.82 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=43.6
Q ss_pred ceEEEEEeecCCCCCCCCCccccccc--C-cHHH---HHHHHHhcCCCC-EEEEcCccccCCCchhHHHHHHHHHhhhhc
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQR--G-SLNT---TRQLIQDLKNID-IVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~--~-~~~~---~~~l~~~~~~pD-fVl~~GDi~y~~g~~~~wd~f~~~i~~l~~ 358 (515)
.++|+.++|+|..-.....+ .+... + .... +++..+ .++++ +++.+||+............--..+-+++.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~-~~~~~~~gg~a~~~~~~~~~~~-~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQ-PLYHANWGDFISFTTHMRRIAH-SRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSC-GGGCCCHHHHHHHHHHHHHHHH-HTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred EEEEEEEeccccCCCCcccc-ccccCccccHHHHHHHHHHHHH-hcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 49999999999632210000 00000 1 1111 222222 24566 666899999643221000000123334556
Q ss_pred CCCE-EEccCCCCCCC
Q 010191 359 TVPY-MIASGNHERDW 373 (515)
Q Consensus 359 ~vP~-~~v~GNHE~~~ 373 (515)
.++| .+++||||+++
T Consensus 89 ~lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYL 104 (322)
T ss_dssp TSCCSEECCCGGGSSS
T ss_pred ccCCcEEeecceeccc
Confidence 7777 78899999974
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.85 E-value=3.3e-05 Score=61.50 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=56.8
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEE----ccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEW----GPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~y----g~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
|..|...++ .....++|+|+|..... ......++| +..+...... . . -.
T Consensus 3 p~~p~~L~~-~~~~~~si~vsW~~p~~-~~~~~~i~Y~i~~~~~~~~~~~~-------~----------------~--~t 55 (94)
T d1x5aa1 3 SLSGLSLKL-VKKEPRQLELTWAGSRP-RNPGGNLSYELHVLNQDEEWHQM-------V----------------L--EP 55 (94)
T ss_dssp CCCSCCCCE-EEEETTEEEEECCCCCS-SCCSSCCEEEEEEECSSCEEEEE-------E----------------S--SS
T ss_pred CCCCCceEE-EEcCCCEEEEEEecccC-CCCCcEEEEEEEEecCCceEEEe-------e----------------c--cC
Confidence 456666666 34468999999976432 112223344 3332211000 0 0 12
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+|+||+|+|.|.+||......|...||+...|+|.|+
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 457899999999999999886677778999999999873
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=4.5e-05 Score=59.96 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--Cc-cEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AE-PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~-~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+. ..+.++++|.|.-...... -. -.++|...+...+.. ..+.. ....
T Consensus 1 P~~P~~~~v~-~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~-----------------~~~~ 58 (96)
T d1x5xa1 1 PSMPASPVLT-KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK----PKYDG-----------------EDLA 58 (96)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE----EEEEE-----------------SCSE
T ss_pred CccCCCCEEE-EecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeE----EeecC-----------------CCCE
Confidence 4567777763 3367899999986432111 11 234444333222111 11110 1123
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..|+||+|+++|.|||......|...||+...|+|.|
T Consensus 59 ~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 59 YTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 5689999999999999987556666789999999987
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=5.8e-05 Score=59.34 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=56.1
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|.-+.+. ..+.++++|.|.-...... ..-.|+|...+..... .+. +-....
T Consensus 1 P~~P~~~~v~-~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~-----------------~~~~~~ 56 (93)
T d1x4xa1 1 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQI------CYC-----------------GPGLSY 56 (93)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCE------EEE-----------------ESCSEE
T ss_pred CcCCCCCEEE-EeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceE------eec-----------------CCccEE
Confidence 3455555553 2356899999976432111 1234666554333211 111 011234
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+|+||+|++.|.+||......|...||+...|+|+|.
T Consensus 57 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 57 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 6899999999999999875556677899999999873
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00018 Score=56.13 Aligned_cols=88 Identities=17% Similarity=0.187 Sum_probs=57.4
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+. ..+.++++|+|.-..+ ....-.|+|...+..... .... ++......|+|
T Consensus 4 aP~n~~~~-~~s~~si~l~W~~p~~-~~~~Y~i~y~~~~~~~~~----~~~~-----------------~~~~~~~~i~~ 60 (92)
T d1qg3a1 4 APQNPNAK-AAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLL-----------------DSKVPSVELTN 60 (92)
T ss_dssp CCEEEEEE-ECSTTCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEE-----------------EESSSEEEECS
T ss_pred cCCCCEEE-EccCCEEEEEEEecCC-CccceEEeeeeccccccE----EEEe-----------------cCCccEEEECC
Confidence 46555553 3367899999987643 223346777655433211 1111 11234567899
Q ss_pred CCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
|+|++.|.+||......|...||+...++|+
T Consensus 61 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 61 LYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp CCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999998755666678988889885
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00022 Score=56.72 Aligned_cols=88 Identities=18% Similarity=0.214 Sum_probs=54.6
Q ss_pred CcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 170 VYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 170 ~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.-+.|......++++|+|.-...... ..-.|+|...+...+.. .+.. .....+++
T Consensus 6 ~pp~~~~~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~-----~~~~-----------------~~~~~~v~ 63 (97)
T d2crza1 6 LPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPRE-----VYQG-----------------SEVECTVS 63 (97)
T ss_dssp CCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEE-----EEEE-----------------SCSEEEEE
T ss_pred CCCEEeeeeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeE-----eecC-----------------CceEEEEc
Confidence 33455333357899999985432111 12356666544433221 1111 11235689
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
+|+|++.|.|||......|...||+...++|.|
T Consensus 64 ~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 64 SLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp SCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred CCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 999999999999987655666788899999876
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=0.0002 Score=57.12 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=54.2
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+++ ...+.++++|+|....+..-..-.|+|...+..... ..... +. ....|
T Consensus 11 P~~P~~~~~-~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~----~~~~~----------------~~--~~~~i 67 (102)
T d1x5za1 11 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITIE----------------PG--TSYRL 67 (102)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEEC----------------SS--SEEEE
T ss_pred CcCCCCeEE-EEccCCEEEEEEECCCCCCccceEEEEEeCCCCceE----EEEcC----------------Cc--CEEEE
Confidence 455655555 334678999999865321111224555543322110 00100 11 13468
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
+||+|++.|.+||......|...+|+...++|..
T Consensus 68 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 68 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 9999999999999876445656788888898864
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00033 Score=56.53 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=57.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCC---ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+ ...+.++|+|.|.-......+ .-.|.|...+....... .. .......
T Consensus 11 P~~P~~l~~-~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~--------------~~~~~~~ 69 (107)
T d1x5fa1 11 PSAPRDVVA-SLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE------NT--------------SHPGEMQ 69 (107)
T ss_dssp CCCCEEEEE-EEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE------EC--------------SSTTCSE
T ss_pred CcCCCccEE-EEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEE------EE--------------eCCCccE
Confidence 455665554 333578999999764211111 22566665433221110 00 0112355
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.+|++|.|+++|.+||......|...+|....++|.|
T Consensus 70 ~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 70 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 7899999999999999987666666678888999876
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00016 Score=56.59 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=33.0
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
..+.|+||+|++.|.+||......|...||+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 356799999999999999887556666789999999987
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.35 E-value=0.00033 Score=54.46 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=49.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|..+.+. ..+.+++.|.|.-..+ ......|....+.. ..... .. -..++
T Consensus 4 P~~P~~l~~~-~~~~~sv~lsW~~p~~---~~~i~~Y~i~~~~~-------~~~~~---------------~~--t~~~~ 55 (88)
T d1k85a_ 4 PTAPTNLAST-AQTTSSITLSWTASTD---NVGVTGYDVYNGTA-------LATTV---------------TG--TTATI 55 (88)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSC---CSSEEEEEEEESSS-------EEEEE---------------SS--SEEEE
T ss_pred cCCCCCcEEE-EecCCEEEEEEeCCCC---CCCEEEEEEEccce-------EEEec---------------CC--CEEEE
Confidence 5556555442 2357899999975432 23455665321111 01000 01 12468
Q ss_pred cCCCCCCEEEEEeceecCCC-cccccceEEEEc
Q 010191 246 RELWPNAMYTYKLGHRLFNG-TYIWSSEYQFKA 277 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg-~~~wS~~~~F~T 277 (515)
+||+||++|.|+|......| ...+|+...++|
T Consensus 56 ~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 99999999999999764455 345677777765
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00064 Score=54.41 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=55.8
Q ss_pred CCCcceeee-cCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 168 APVYPRLAQ-GKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 168 ~P~~~~La~-~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
+|..+.+.. ..+.+++.|+|........ ..-.|+|...+...... ...... .+-.+...
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 75 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 75 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT-SEEEEE-----------------STTCSEEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce-eEEEEe-----------------CCCeeEEE
Confidence 344455433 3457899999986542111 11245555443321100 000011 12234567
Q ss_pred ecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
|+||+|++.|.+||......|...||+...|+|+.
T Consensus 76 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 76 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp ECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 89999999999999987556666789999999975
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.00067 Score=53.62 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=56.8
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCC----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|..+++ ..-+.++++|.|......... .-.|+|...++..... ...... .+.....
T Consensus 4 ~P~~~~~-~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~-~~~~~~-----------------~~~~~~~ 64 (101)
T d1x4ya1 4 GPYITFT-DAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSD-YKKDMV-----------------EGDRYWH 64 (101)
T ss_dssp CCEEEEE-ECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGG-CCCEEE-----------------ETTCCEE
T ss_pred CCcccEE-EEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeee-eeEEEE-----------------cCCeeEE
Confidence 4555554 334688999999864321111 1247776544332111 011111 1123345
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
+|.+|+|++.|.+||......|...||+...++|..
T Consensus 65 ~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 65 SISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp EECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 689999999999999987666777899999999863
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00026 Score=56.17 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=54.8
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCC----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
.+|..+++. ..+.++++|+|......... .-.|+|...+..... ..... ..+.-..
T Consensus 4 ~pP~~l~v~-~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 63 (104)
T d2b5ib2 4 MAPISLQVV-HVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEE--APLLT-----------------LKQKQEW 63 (104)
T ss_dssp CCCEEEEEE-EECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTT--SCCEE-----------------ECSCCCE
T ss_pred CCCCCcEEE-EEeCCEEEEEEccccccccccceeEEEEEEeccccccee--eeEEe-----------------cCCCcEE
Confidence 467777763 33578999999876431110 124555544332110 00000 0122345
Q ss_pred EEecCCCCCCEEEEEeceecCCCc----ccccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGT----YIWSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~----~~wS~~~~F~T~p 279 (515)
+.|+||+|+|.|.+||......|. ..||+...|+|.|
T Consensus 64 ~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 64 ICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 688999999999999997533332 3577889999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.00032 Score=55.68 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=56.8
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+++. ..+.+++.|.|........ ..-.|+|...+..... ..... +..+..
T Consensus 4 P~~p~~~~~~-~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~----~~~~~-----------------~~~~~~ 61 (98)
T d1x5la1 4 PSQVVVIRQE-RAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTRA 61 (98)
T ss_dssp CCCCCCEECS-CBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSEE
T ss_pred CCCCCceEEE-eccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee----eEEec-----------------CCceEE
Confidence 4556565542 3357999999986542111 1224677654432111 01111 112456
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+|+||+|+++|.+||......|...||+...|+|.
T Consensus 62 ~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 62 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred EECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 78999999999999987755566678999999985
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00018 Score=57.39 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=32.2
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
...|+||+|++.|.+||......|...||+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 46789999999999999987555666788999999987
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=0.00036 Score=56.41 Aligned_cols=93 Identities=19% Similarity=0.236 Sum_probs=53.6
Q ss_pred CCCCCCcceeeecC-CCCeEEEEEEeCCCCCCCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 165 ~~~~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
-|.+|..+.+.... +.+++.|.|....+ ...+ .|+|...++........ .++.
T Consensus 10 ~P~~P~~p~~~~~~~~~~sv~l~W~~P~~--~~~~I~~Y~v~~~~~~~~~~~~~~~--------------------~~~~ 67 (108)
T d1wf5a1 10 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENNAPWTVLLAS--------------------VDPK 67 (108)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTTCCCEEEESS--------------------CCTT
T ss_pred CCCCCCCCEEEEEeccCCEEEEEEECCCC--CCCccEEEEEEEEeccCCceEEeee--------------------ecCC
Confidence 45677777765543 57899999987643 2222 45555443321110000 0112
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
.....++||+||++|.|||......|...||+.-...|.|
T Consensus 68 ~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P 107 (108)
T d1wf5a1 68 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence 2345789999999999999876444444555544444443
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00065 Score=53.75 Aligned_cols=91 Identities=14% Similarity=0.168 Sum_probs=51.4
Q ss_pred CCCCCcceeeec---CCCCeEEEEEEeCCCCC--CCccEEEE----ccCCCCcceecCcceEEeccccCCCCCccccccC
Q 010191 166 PNAPVYPRLAQG---KVWNEMTVTWTSGYGIN--EAEPFVEW----GPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 166 ~~~P~~~~La~~---~~~~~m~V~W~t~~~~~--~~~~~V~y----g~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~ 236 (515)
|.+|..+.+... ...+++.|+|....... .....++| ...+...+.. ..
T Consensus 3 P~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~-----~~----------------- 60 (104)
T d3d48r2 3 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HF----------------- 60 (104)
T ss_dssp CCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEE-----EE-----------------
T ss_pred CcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceee-----ec-----------------
Confidence 566766665432 24678999999764211 11223444 3333222110 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCc-ccccceEEEEcC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~~F~T~ 278 (515)
.+....+.|.||+|++.|.+||......|. ..||+...++||
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 61 AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 112234678999999999999998754554 568888888875
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.17 E-value=0.00095 Score=52.08 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=52.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+ ...+.++++|.|....+... ..=.|+|+..++.... .... ++.....
T Consensus 1 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~----~~~~-----------------~~~~~~~ 58 (93)
T d2vkwa2 1 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKP----EIRL-----------------PSGSDHV 58 (93)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCC----CEEE-----------------CTTCCEE
T ss_pred CCCCccCEe-EEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceee----eeec-----------------cCCceEE
Confidence 456766554 45568899999998754211 1235777765443211 0111 1122356
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
.++||+|++.|.+||......|...-| ...|+|.
T Consensus 59 ~i~~L~p~t~Y~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 59 MLKSLDWNAEYEVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC
T ss_pred EEeccccceEEEEEEEEEcCCCCcCCE-eEEEEec
Confidence 789999999999999976433322222 4667764
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.16 E-value=0.001 Score=52.81 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=53.0
Q ss_pred CCCCCcceeee---cCCCCeEEEEEEeCCCCC--CCcc----EEEEccCCCCcceecCcceEEeccccCCCCCccccccC
Q 010191 166 PNAPVYPRLAQ---GKVWNEMTVTWTSGYGIN--EAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (515)
Q Consensus 166 ~~~P~~~~La~---~~~~~~m~V~W~t~~~~~--~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~ 236 (515)
|++|..+.+.. ....++++|.|......+ .... .|+|...+...+... ..
T Consensus 3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~-----~~---------------- 61 (103)
T d1f6fb2 3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIH-----FT---------------- 61 (103)
T ss_dssp CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEE-----EE----------------
T ss_pred CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeee-----cc----------------
Confidence 56676555533 234678999998764311 1112 445554443332210 00
Q ss_pred CCeEEEEEecCCCCCCEEEEEeceecCCCc-ccccceEEEEcC
Q 010191 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (515)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~~F~T~ 278 (515)
+.-....|.||+||++|.+||......|. ..||+.-.+++|
T Consensus 62 -~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 62 -GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp -ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred -cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 11235678999999999999998754443 457777777664
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00048 Score=54.43 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=42.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCC-----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA-----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
|.+|..+.+. ....++++|+|......... .-.|+|...+...... .... ...+..
T Consensus 2 P~~P~~l~v~-~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~-----~~~~-------------~~~~~~ 62 (101)
T d1iarb2 2 PRAPGNLTVH-TNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-----IYNV-------------TYLEPS 62 (101)
T ss_dssp CCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-----EEEE-------------CSSCCE
T ss_pred cccCCcCEEE-EEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeee-----eeee-------------ccCccc
Confidence 5667655552 33468999999876431111 1256666554332211 0110 012234
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCccccc
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS 270 (515)
..+.+.+|+|++.|.+||......|.+.||
T Consensus 63 ~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wS 92 (101)
T d1iarb2 63 LRIAASTLKSGISYRARVRAWAQAYNTTWS 92 (101)
T ss_dssp EEECC-----CCCEEEEEEEECGGGTCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCCCCc
Confidence 567899999999999999876444443444
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00061 Score=53.77 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=47.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|....|. ..+.+++.|+|........-.-.|+|...+...+... .. +.....+|
T Consensus 3 P~~P~nl~v~-~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------------------~~~~~~~~ 59 (95)
T d2b5ic1 3 PWAPENLTLH-KLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFSL 59 (95)
T ss_dssp CCCCEEEEEE-EEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEEE
T ss_pred CcCCCCCEEE-EEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe----ee------------------cccceeEc
Confidence 6678777763 3356899999998754222345778876654432211 00 01235678
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
.+|.|++.|.+||...
T Consensus 60 ~~L~p~t~Y~frVRa~ 75 (95)
T d2b5ic1 60 PSVDGQKRYTFRVRSR 75 (95)
T ss_dssp CSCCTTSCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEe
Confidence 9999999999999875
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.07 E-value=0.0028 Score=60.92 Aligned_cols=187 Identities=17% Similarity=0.075 Sum_probs=87.9
Q ss_pred eEEEEEeecCCCCCCC----CCcccccccCcHHHHHHHHHhc--CCC-CEEEEcCccccCCCchhHHHHHHHHHhhhhcC
Q 010191 287 QQVIIFGDMGKDEADG----SNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g----~~~y~~~~~~~~~~~~~l~~~~--~~p-DfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~ 359 (515)
++|+.++|+|..-... ..+.. ..+.+..+..++++. +++ -+++.+||+..... ...+.+-...+ .++..
T Consensus 3 l~IlhtnD~Hg~l~~~~~~~~~~~~--~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~-~~~~~~g~~~~-~~~n~ 78 (302)
T d2z1aa2 3 LTLVHTNDTHAHLEPVELTLSGEKT--PVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADR-YFMHR 78 (302)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEE--EECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHH-HHHHH
T ss_pred EEEEEEcccccCcccccccccCCcc--ccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH-hHhhhcchhHH-HHHHh
Confidence 7899999998543110 00000 012233344444431 233 47888999995432 22221111122 22223
Q ss_pred CCE-EEccCCCCCCCCCCCCCCCCCCCCCccccccc--ceeccCC---CCCCceEEEEEeCCEE--EEEEcCCCC-----
Q 010191 360 VPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE--NMFYVPT---ENRAKFWYSTDYGMFR--FCIADTEQD----- 426 (515)
Q Consensus 360 vP~-~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~--~~f~~P~---~~~~~~~Ysfd~G~v~--fi~Ldt~~~----- 426 (515)
+.| ..++||||+++... ++...-. +...|+. ..+.... ...-..|.-.+.++++ ||.+-+...
T Consensus 79 ~gyDa~~~GNHEfd~G~~--~l~~~~~--~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 79 LRYRAMALGNHEFDLGPG--PLADFLK--GARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp TTCCEEECCGGGGTTCHH--HHHHHHT--TCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred cccccccccchhhhcChh--HHHHHhh--hcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 333 78899999985310 0000000 0000110 0000000 0112346677888855 455544320
Q ss_pred ------cCCCHHHHHHHHHHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHh-cCCeEEEeCc
Q 010191 427 ------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGH 499 (515)
Q Consensus 427 ------~~~g~~Q~~WL~~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k-~~VdlvlsGH 499 (515)
+....+..++..+.|++ .+..-+|++.|... . .-..+.++ -+||+++.||
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~--------~------------~d~~la~~~~giD~ii~gh 211 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY--------G------------EDLKLARRLVGVQVIVGGH 211 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--------H------------HHHHHHTTCSSCCEEEECS
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCc--------c------------hhhHHHhcCCCeeeeecCc
Confidence 11123444555555554 34566899999763 0 00123333 3799999999
Q ss_pred ccccc
Q 010191 500 VHNYE 504 (515)
Q Consensus 500 ~H~Ye 504 (515)
.|..-
T Consensus 212 ~h~~~ 216 (302)
T d2z1aa2 212 SHTLL 216 (302)
T ss_dssp SCCCB
T ss_pred cceee
Confidence 99854
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0011 Score=52.52 Aligned_cols=91 Identities=13% Similarity=0.048 Sum_probs=53.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
|.+|...++ ...+.++++|.|....+ .-..-.|+|...++.... ... ++-.....|
T Consensus 1 P~~P~~l~~-~~~t~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~l 56 (102)
T d2cuha1 1 PDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPLQ-----AET-----------------PGSAVDYPL 56 (102)
T ss_dssp CSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCEE-----EEE-----------------ETTCSEEEE
T ss_pred CcCCCccEE-EEeCCCEEEEEEEeeec-cceeeEEEEEecccccee-----eee-----------------eeeeeeEEE
Confidence 456666655 33468999999987542 112346777654432211 111 112235679
Q ss_pred cCCCCCCEEEEEeceecCCCcccccceEEEEcCCCC
Q 010191 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
+||+||++|.++|.....+|... .....|+|.+.+
T Consensus 57 ~~L~p~t~Y~~~V~a~~~~~~s~-~~~~~~~T~~~~ 91 (102)
T d2cuha1 57 HDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 91 (102)
T ss_dssp CSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred ccEEeeEEEEEEEEEEeCCCCcC-CEEEEEECCCCC
Confidence 99999999999998764333222 134578887543
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0013 Score=52.31 Aligned_cols=94 Identities=18% Similarity=0.067 Sum_probs=57.2
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCc----cEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAE----PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|..+.+ ...+.+++.|.|.......... -.|+|...+...... ... .-....+.....
T Consensus 11 pP~~v~v-~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~----~~~------------~~~~~~~~~~~~ 73 (109)
T d1va9a1 11 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ----YSI------------VEMKATGDSEVY 73 (109)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCS----CBC------------CBCCCCSSEEEE
T ss_pred CCcCcEE-EEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccce----eee------------eEEecCCCeeEE
Confidence 4555555 3446899999998753211111 256666543322110 000 001123456778
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
+|++|+|++.|.+||......|...||....|+|.
T Consensus 74 ~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 74 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 89999999999999998765666668888888774
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0016 Score=51.88 Aligned_cols=93 Identities=14% Similarity=0.111 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCc---cEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAE---PFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~---~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+....+.+++.|.|.......... -.|+|...+...... .... .+--..
T Consensus 5 ~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~---~~~~-----------------~~~~t~ 64 (105)
T d1erna2 5 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ---RVEI-----------------LEGRTE 64 (105)
T ss_dssp CCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE---EEEE-----------------CTTCCE
T ss_pred cCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceE---EEee-----------------cCCccE
Confidence 56787777777777788999998754211111 256665543322110 0000 111234
Q ss_pred EEecCCCCCCEEEEEeceecC--CCcc---cccceEEEEcC
Q 010191 243 GFLRELWPNAMYTYKLGHRLF--NGTY---IWSSEYQFKAS 278 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~--dg~~---~wS~~~~F~T~ 278 (515)
..|.+|+||++|.+||..... .+.+ .||+..+++||
T Consensus 65 ~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 65 CVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 678999999999999987521 2222 46677888775
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.00046 Score=60.87 Aligned_cols=69 Identities=10% Similarity=0.182 Sum_probs=42.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh--cCCCCEEEEcCccccCCCc-----hhHHHHHHHHHhhhhcC
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-----ISQWDQFTAQIEPIAST 359 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~--~~~pDfVl~~GDi~y~~g~-----~~~wd~f~~~i~~l~~~ 359 (515)
.|++++||+|.. ...++++++. ..++|.|+++||++..... ........+.++.+ .
T Consensus 2 Mki~iiSDiHg~---------------~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~ 64 (184)
T d1su1a_ 2 MKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 64 (184)
T ss_dssp CEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--C
Confidence 489999999832 2334444432 2589999999999953211 11112223333322 4
Q ss_pred CCEEEccCCCCCC
Q 010191 360 VPYMIASGNHERD 372 (515)
Q Consensus 360 vP~~~v~GNHE~~ 372 (515)
.|++.+.||||..
T Consensus 65 ~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 65 HKVIAVRGNCDSE 77 (184)
T ss_dssp GGEEECCCTTCCH
T ss_pred CcEEEecCCCCch
Confidence 5899999999964
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00094 Score=52.72 Aligned_cols=90 Identities=17% Similarity=0.274 Sum_probs=54.0
Q ss_pred CCCcceeeecC-CCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 168 APVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 168 ~P~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
+|.++.++... ..+++.|.|.......-..-.|+|...++.... ... +.++-...++|+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~-----~~~---------------~v~~~~~~~~l~ 61 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW-----KEA---------------TIPGHLNSYTIK 61 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCC-----EEE---------------EECSSCCEEEEC
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeecccccee-----eee---------------ccCCCccEEEEC
Confidence 57777776544 368999999986421112246777765433210 011 113445667899
Q ss_pred CCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
||+||+.|..+|..-...|... .....|+|.
T Consensus 62 gL~P~t~Y~v~v~av~~~G~s~-~~~~~~tT~ 92 (93)
T d1owwa_ 62 GLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 92 (93)
T ss_dssp SCCSSEEEEEEEEEEESSSCEE-EEEEEEEEC
T ss_pred CcccCcEEEEEEEEEeCCCccC-cEEEEEEec
Confidence 9999999999998764333322 124677764
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.0011 Score=53.51 Aligned_cols=96 Identities=15% Similarity=0.152 Sum_probs=56.2
Q ss_pred CCCCCcceeeecC-CCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGK-VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~-~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+.... ..++++|.|.-...... ..-.|+|+...+..+... ... ...+....
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~------~~~------------~~~~~~~~ 66 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI------PPE------------DTASTRSS 66 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC------CGG------------GGCSCCSE
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecc------ccc------------cccccccE
Confidence 5677777665433 47899999986432110 123556665433322111 000 01223456
Q ss_pred EEecCCCCCCEEEEEeceecCCCccc---ccceEEEEcCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASP 279 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~---wS~~~~F~T~p 279 (515)
+.|++|.|++.|.+||......|... ||+...++|+.
T Consensus 67 ~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 67 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 77999999999999998664455433 55678888854
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.001 Score=53.11 Aligned_cols=90 Identities=21% Similarity=0.302 Sum_probs=55.9
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEE----ccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEW----GPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~y----g~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
-|.+|..+.+. ..+.++++|+|.-... ...+...| ........ ...... +.-
T Consensus 10 ~P~~P~~~~~~-~~~~~sv~l~W~pp~~--~~~~i~~Y~i~~~~~~~~~~----~~~~~~-----------------~~~ 65 (105)
T d1x3da1 10 EPDIPNPPRIA-NRTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGE----FCQCYM-----------------GSQ 65 (105)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSC----CEEEEE-----------------ESC
T ss_pred CCcCCCCCEEE-EccCCEEEEEEECCCC--CcCccEEEEEEEecCCCcce----eEEEec-----------------CCc
Confidence 45667777763 3467899999987643 23344444 32222111 011111 112
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
....+.+|+|+++|.+||......|...||+...|+|.
T Consensus 66 ~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 66 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred cEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 34567899999999999997755666678988899885
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0012 Score=52.72 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=49.2
Q ss_pred cCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEE
Q 010191 177 GKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMY 254 (515)
Q Consensus 177 ~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y 254 (515)
..+.++++|.|.-...... ..-.|+|+...+..... ... ..++-.+...|+||+||+.|
T Consensus 17 ~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~-----~~~--------------~~~~~~~~~~i~~L~p~t~Y 77 (105)
T d2d9qb2 17 PPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWA-----LVG--------------PLPLEALQYELCGLLPATAY 77 (105)
T ss_dssp --CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCE-----EEE--------------EECSCEEEEEECSCCSCCCE
T ss_pred cCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCcccee-----eee--------------cccCCcceeEEecccCCeEE
Confidence 3368899999986532111 12356676543321110 000 01334567789999999999
Q ss_pred EEEeceecCCCcc---cccceEEEEcC
Q 010191 255 TYKLGHRLFNGTY---IWSSEYQFKAS 278 (515)
Q Consensus 255 ~Yrv~~~~~dg~~---~wS~~~~F~T~ 278 (515)
.+||......|.+ .||+..+++|.
T Consensus 78 ~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 78 TLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp EEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred EEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 9999876444543 46677777763
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.002 Score=51.90 Aligned_cols=93 Identities=20% Similarity=0.269 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC----C----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCC
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE----A----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~----~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~ 237 (515)
|.+|.-+++.. ..+++.|+|........ . .-.|+|...+...... ..... .
T Consensus 6 P~pP~nl~v~~--~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~-----------------~ 64 (114)
T d2gysa2 6 PPEPRDLQIST--DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDA--AILLS-----------------N 64 (114)
T ss_dssp CCCCEEEEEEE--ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTC--EEEEE-----------------S
T ss_pred CCcCCCeEEEE--eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEE--EEeec-----------------c
Confidence 66777777643 45789999988643111 1 1245666544322110 00000 1
Q ss_pred CeEEEEEecCCCCCCEEEEEeceecCCCc------ccccceEEEEcCC
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT------YIWSSEYQFKASP 279 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~------~~wS~~~~F~T~p 279 (515)
..-..+.+.+|.|++.|..||......|. ..||+...|+|+|
T Consensus 65 ~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 65 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred CceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 12346678999999999999998643332 2578889999986
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.0012 Score=52.53 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=54.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+ ...+.+++.|+|........ ..-.|+|...+...+.. ... . ....
T Consensus 11 P~~P~~l~v-~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~------~~~---------------~--~~~~ 66 (103)
T d1x5ga1 11 PGPAPNLRA-YAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD------VDV---------------S--SHSY 66 (103)
T ss_dssp CCCCSSCEE-EEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC------EEE---------------C--SSEE
T ss_pred cccCCCcEE-EEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEE------Eec---------------c--ccEE
Confidence 556766665 33357899999976432111 11246666544322110 000 0 1245
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
.|+||+|++.|.++|......|...+|+...++|.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 67 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred ecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 68999999999999987654555567887888875
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.92 E-value=0.0021 Score=49.43 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=46.1
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+ ...+.++++|.|....+ .-..-.|+|....+.... ..... ...+-.....|+|
T Consensus 3 aP~~l~v-~~~~~~sv~v~W~~p~~-~~~~y~v~y~~~~~~~~~----~~~~~--------------~~~~~~~~~~i~~ 62 (92)
T d1tdqa2 3 APKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVP--------------KGIGPTTKTTLTD 62 (92)
T ss_dssp CCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEE--------------CCSSSEEEEEECS
T ss_pred cCcCCEE-EEecCCEEEEEEEecCC-cccceEEEEEEcCCCcce----eeEEE--------------ecCCCeeEEEECC
Confidence 4655554 22357899999987643 223456778765432211 01110 0133456789999
Q ss_pred CCCCCEEEEEeceec
Q 010191 248 LWPNAMYTYKLGHRL 262 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (515)
|+|++.|.++|..-.
T Consensus 63 L~p~t~Y~~~V~a~~ 77 (92)
T d1tdqa2 63 LVPGTEYGVGISAVM 77 (92)
T ss_dssp CCTTCEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEEe
Confidence 999999999998763
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.00054 Score=54.91 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=28.9
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
..++||+||++|.+||......|...||+...++|+
T Consensus 70 ~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 70 HLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 478999999999999998755565667877777774
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.00076 Score=53.05 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=30.4
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
..+|+||+|+|.|.+||......|...||....++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 4678999999999999998755666678888888774
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0017 Score=51.63 Aligned_cols=85 Identities=14% Similarity=0.196 Sum_probs=51.0
Q ss_pred CCCCCcceeeec-CCCCeEEEEEEeCCCCCCC----ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 166 PNAPVYPRLAQG-KVWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 166 ~~~P~~~~La~~-~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
|.+|..+.+..- ...+++.|+|......... .-.|+|...+...+.. .. ..+..
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 60 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT------WM---------------VKDLQ 60 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE------EE---------------CGGGC
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceee------ec---------------cccce
Confidence 667877776543 3578999999975422222 2355666544332211 11 01122
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccc
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
....|.+|+|++.|.+||......|.+.||+
T Consensus 61 ~~~~i~~L~p~t~Y~~rVra~n~~g~g~wSe 91 (104)
T d1n26a3 61 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSE 91 (104)
T ss_dssp SEEEESSCCTTCCEEEEEEEEETTTBSCCCC
T ss_pred EEEEECCCCCCCEEEEEEEEEeCCCccCCcC
Confidence 3557899999999999998764445445554
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0028 Score=52.12 Aligned_cols=87 Identities=13% Similarity=0.023 Sum_probs=53.1
Q ss_pred CCCeEEEEEEeCCCCCC-CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEE
Q 010191 179 VWNEMTVTWTSGYGINE-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYK 257 (515)
Q Consensus 179 ~~~~m~V~W~t~~~~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yr 257 (515)
+.++++|+|.-...... ..-.|.|...+..... ..-.+.+. ..+.....+|+||+|+|.|.+|
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~--~~~~~~~v--------------~~~~~~s~~i~~L~p~t~Y~f~ 91 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT--SSWQNLDA--------------KVPTERSAVLVNLKKGVTYEIK 91 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT--TCCEEEEC--------------CCTTCCEEEEESCCSSEEEEEE
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCC--cceEEEEe--------------ccCceeEEEECCCCCCCEEEEE
Confidence 57899999987542111 1236777654322110 00011110 0123445678999999999999
Q ss_pred eceecCCCcccccceEEEEcCCCC
Q 010191 258 LGHRLFNGTYIWSSEYQFKASPYP 281 (515)
Q Consensus 258 v~~~~~dg~~~wS~~~~F~T~p~~ 281 (515)
|..-...|...+|+...++|.+..
T Consensus 92 V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 92 VRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEEEeCCcCcCCCCCEEEEeCCCC
Confidence 987755566667888899998743
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.76 E-value=0.0042 Score=49.50 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=45.8
Q ss_pred CCcceeeecCCCCeEEEEEEeCCCCCCCcc----EEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|..|.+ ...+.++++|.|.-..+ ...+ .|+|...+.. .+...... ......+ .-...+.-...
T Consensus 3 P~~p~v-~~~~~~sv~l~W~~P~~--~g~~I~~Y~ie~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~ 70 (107)
T d2ic2a1 3 PTPPNV-TRLSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKRKNWQTTNDN--IPYGKPK-------WNSELGKSFTA 70 (107)
T ss_dssp CCCCEE-EECC---EEEEEEEECC--SSCCEEEEEEEEEECC---CCEEEEEE--EECCSCS-------CSSSSEEEEEE
T ss_pred CcCCEE-EEEECCEEEEEEEeCcc--ccCCceEEEEEEEeccCCCcceEEEee--eecccee-------eeecccceeEE
Confidence 444444 33367899999998753 2223 4566644332 22111110 0000000 00123455677
Q ss_pred EecCCCCCCEEEEEeceecCCCccccc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWS 270 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS 270 (515)
+|+||+|+++|.+||......|...+|
T Consensus 71 ~i~~L~p~t~Y~frV~A~N~~G~s~~S 97 (107)
T d2ic2a1 71 SVTDLKPQHTYRFRILAVYSNNDNKES 97 (107)
T ss_dssp EECSCCSSEEEEEEEEEEETTSCEEEC
T ss_pred EECCCcCCcEEEEEEEEEcCCCCCCCC
Confidence 899999999999999987444544444
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0018 Score=51.75 Aligned_cols=96 Identities=14% Similarity=0.073 Sum_probs=51.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+ ...+.++++|.|.-..+... ..-.|+|.................. ..+.....
T Consensus 11 P~~P~~~~~-~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 74 (111)
T d1wisa1 11 PGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS---------------NEPDARSM 74 (111)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE---------------SCTTCSEE
T ss_pred CcCCCCCEE-EEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee---------------cccceeEE
Confidence 455666655 23468899999986542111 1235666654332211100000000 11223345
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccce-EEEEc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKA 277 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~-~~F~T 277 (515)
.|+||+|++.|.+||......|...||+. -.|+|
T Consensus 75 ~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~T 109 (111)
T d1wisa1 75 EVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109 (111)
T ss_dssp EECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence 78999999999999997744444445532 34554
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.71 E-value=0.00085 Score=54.99 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=32.0
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+|++|+|+++|.+||......|...||+...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 356899999999999999875556667889999998654
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.69 E-value=0.0023 Score=51.47 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=46.5
Q ss_pred ccCCCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCC-cceecCcceEEeccccCCCCCccccccCCC
Q 010191 162 TFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (515)
Q Consensus 162 ~~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g 238 (515)
+++-|.+|..+.+. ..+.++++|.|.-..+... ..-.|+|...+.. .+.... ... ++
T Consensus 7 ~~~pP~~P~~~~v~-~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~--~~~-----------------~~ 66 (108)
T d1x4za1 7 RLSPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT--SAI-----------------PP 66 (108)
T ss_dssp SCCCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE--EEE-----------------CT
T ss_pred ccCCCccCCCCEEE-EccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEE--Eee-----------------cC
Confidence 34557788888763 4467899999964432110 1235666654332 111100 000 12
Q ss_pred eEEEEEecCCCCCCEEEEEecee
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHR 261 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (515)
......++||+|+++|.|||...
T Consensus 67 ~~~~~~v~~L~p~t~Y~frV~A~ 89 (108)
T d1x4za1 67 SRLSVEITGLEKGISYKFRVRAL 89 (108)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEE
T ss_pred CccEEEECCCCCCCEEEEEEEEE
Confidence 23346789999999999999876
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0014 Score=52.64 Aligned_cols=94 Identities=10% Similarity=-0.025 Sum_probs=56.8
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
.+.+|..+.+.. ..++++|.|.-...... ..-.|+|...++... . +.. ..++..+.
T Consensus 7 ~~sPP~~~~~~~--t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~-~------~~~-------------~~~~~~~~ 64 (108)
T d1v5ja_ 7 GLSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-V------LDP-------------AVAGTETE 64 (108)
T ss_dssp CCCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-E------EEE-------------EECSSCCE
T ss_pred CCCcCCCeEEEE--cCCEEEEEEEecccCCCceeEEEEEeeeeeeeee-e------ccc-------------cccceeee
Confidence 345566555433 46789999986532111 113667765543211 1 100 00223356
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..++||+|++.|.|||..-...|...+|+...++|...
T Consensus 65 ~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 65 LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 67999999999999999775556666777777877643
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.64 E-value=0.0039 Score=48.69 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=45.0
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|...++.-..+.+.++|.|....+..-..-.|+|....+.... ..... .++....+.|+|
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~----~~~~~---------------~~~~~~~~~i~~ 64 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN----SLEEV---------------VHADQSSCTFDN 64 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSC----CEEEE---------------ECTTCCEEECCC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCce----EEEEE---------------eCCCccEEEECC
Confidence 56667765444466799999865321112235778755432211 01110 122345678999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+||+.|..+|..-
T Consensus 65 L~p~t~Y~v~V~a~ 78 (94)
T d1fnfa1 65 LSPGLEYNVSVYTV 78 (94)
T ss_dssp CCTTSCEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999875
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.58 E-value=0.0031 Score=50.34 Aligned_cols=79 Identities=13% Similarity=0.037 Sum_probs=47.5
Q ss_pred cCCCCeEEEEEEeCCCCCCCc----cEEEEccCCC-CcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCC
Q 010191 177 GKVWNEMTVTWTSGYGINEAE----PFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPN 251 (515)
Q Consensus 177 ~~~~~~m~V~W~t~~~~~~~~----~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pg 251 (515)
..+.+++.|.|..... ... -.|+|....+ ..+.... . ..+-.+..+|++|+|+
T Consensus 18 ~~~~~~i~v~W~pp~~--~~~~~~~Y~i~y~~~~~~~~w~~v~----~----------------~~~~~~~~~l~~L~p~ 75 (106)
T d1cd9b2 18 SHQPGCLWLSWKPWKP--SEYMEQECELRYQPQLKGANWTLVF----H----------------LPSSKDQFELCGLHQA 75 (106)
T ss_dssp --CCSCEEEEEECCGG--GTTSCEEEEEEEEESSTTCCCEEEE----E----------------EESCEEEEEECCCCSC
T ss_pred cCCCCEEEEEEcCccc--CCccceEEEEEEeeccccccceeee----c----------------ccCCceEEEEeccCCC
Confidence 3467899999986532 122 2777775432 2222110 0 0123456679999999
Q ss_pred CEEEEEeceecCCCccc---ccceEEEEc
Q 010191 252 AMYTYKLGHRLFNGTYI---WSSEYQFKA 277 (515)
Q Consensus 252 t~Y~Yrv~~~~~dg~~~---wS~~~~F~T 277 (515)
|.|.+||......|... ||...+|++
T Consensus 76 t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 76 PVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp SCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred eEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 99999998765555543 456666664
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0038 Score=47.97 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=45.9
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|..+++. ..+.++++|.|.-... ....-.|+|...++.... ..... ++-...+.|.
T Consensus 3 d~P~~l~v~-~~s~~s~~l~W~~p~~-~~~~y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (90)
T d1tena_ 3 DAPSQIEVK-DVTDTTALITWFKPLA-EIDGIELTYGIKDVPGDR---TTIDL-----------------TEDENQYSIG 60 (90)
T ss_dssp CCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTCC---EEEEE-----------------ETTCCEEEEC
T ss_pred CCCCCcEEE-EecCCEEEEEEEeCce-EeccEEEEEEEcCCCcee---EEEEe-----------------cCCcceeeEe
Confidence 467766663 4468999999986532 123347777755432211 01111 1223456899
Q ss_pred CCCCCCEEEEEeceec
Q 010191 247 ELWPNAMYTYKLGHRL 262 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (515)
||+||++|.++|....
T Consensus 61 ~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 61 NLKPDTEYEVSLISRR 76 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred eecCCCEEEEEEEEEe
Confidence 9999999999998764
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.0019 Score=52.68 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCC-C-CccEEEEccCCCCc-ceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
-|.+|..+.+. ..+.++++|+|.-..+.. + ..-.|+|....... +.... . . .-..
T Consensus 15 ~P~pP~~~~v~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~-~-----------------~~~~ 72 (117)
T d1uema_ 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA---N-H-----------------VKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE---E-E-----------------ECSS
T ss_pred cCcCCCCCEEE-EccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec---c-c-----------------cccc
Confidence 35678777763 235789999997543211 1 11245565443221 11100 0 0 0012
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceE-EEEcCCC
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~-~F~T~p~ 280 (515)
..+|+||+|++.|.+||......|...||+.- .++|.+.
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~~ 112 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred cceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCCC
Confidence 34689999999999999876434444555442 3566543
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.54 E-value=0.0058 Score=46.60 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=44.6
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|...++ ...+.++++|+|....+ .-..-.|+|...+..... ... ++-.....|+|
T Consensus 2 aP~~l~v-~~~t~~sv~v~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~~~~ 57 (87)
T d1qr4a1 2 NPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKNE-----MEI-----------------PVDSTSFILRG 57 (87)
T ss_dssp CCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEEE-----EEE-----------------CTTCSEEEEES
T ss_pred cCcCcEE-EEecCCEEEEEEECCCC-CcceeEEEeecCCcceeE-----EeC-----------------CCCcCEEEECC
Confidence 4665665 34467899999987643 122347778765432211 111 11234568999
Q ss_pred CCCCCEEEEEeceec
Q 010191 248 LWPNAMYTYKLGHRL 262 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (515)
|+||++|.++|....
T Consensus 58 L~p~t~Y~v~V~a~~ 72 (87)
T d1qr4a1 58 LDAGTEYTISLVAEK 72 (87)
T ss_dssp CCSSCEEEEEEEEES
T ss_pred CCcCCEEEEEEEEEc
Confidence 999999999998763
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.53 E-value=0.0047 Score=47.97 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=44.3
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCC---ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
+|..+.+ ...+.+++.|.|......... .-.|+|+..+...... ..+.. .+..+...
T Consensus 9 ~P~~~~v-~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~---~~~~~----------------~~~~~~~~ 68 (95)
T d2ibga1 9 VPELLEI-EEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYF---KATIE----------------GAHARSFK 68 (95)
T ss_dssp CCEECCC-BCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCE---EEEEE----------------CTTCCEEE
T ss_pred CCcCeEE-EEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceee---eeecc----------------CCceeEEE
Confidence 3544443 333579999999864321111 1267787554321100 00110 12244567
Q ss_pred ecCCCCCCEEEEEeceecCCCc
Q 010191 245 LRELWPNAMYTYKLGHRLFNGT 266 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg~ 266 (515)
|+||+|+|.|.+||..-...|.
T Consensus 69 i~~L~p~t~Y~~~V~A~n~~G~ 90 (95)
T d2ibga1 69 IAPLETATMYEFKLQSFSAASA 90 (95)
T ss_dssp ECSCCTTCEEEEEEEEECSSCB
T ss_pred EeeccCCeEEEEEEEEEeCCcc
Confidence 9999999999999987643343
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.53 E-value=0.0012 Score=59.91 Aligned_cols=62 Identities=18% Similarity=0.374 Sum_probs=42.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhc---CCCCEEEEcCccccCCCchhHHHHHHHHHhhhhcCCCEEE
Q 010191 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (515)
Q Consensus 288 rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~---~~pDfVl~~GDi~y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (515)
|++++||+|- ....++++++++ .+.|-++++||+++ .|..+ .+.++ +..+.-+.+
T Consensus 14 rI~vIgDIHG---------------~~~~L~~lL~~i~~~~~~d~lv~lGD~vD-rGp~s-----~~vl~-~l~~~~~~~ 71 (219)
T d1g5ba_ 14 NIWVVGDLHG---------------CYTNLMNKLDTIGFDNKKDLLISVGDLVD-RGAEN-----VECLE-LITFPWFRA 71 (219)
T ss_dssp CEEEECCCTT---------------CHHHHHHHHHHHTCCTTTCEEEECSCCSS-SSSCH-----HHHHG-GGGSTTEEE
T ss_pred eEEEEEeccc---------------CHHHHHHHHHHcCCCCCCCEEEEeCCccc-cCccH-----HHHHH-Hhhcccccc
Confidence 6899999973 345677777763 35689999999995 44332 12233 234456899
Q ss_pred ccCCCCC
Q 010191 365 ASGNHER 371 (515)
Q Consensus 365 v~GNHE~ 371 (515)
+.||||.
T Consensus 72 i~GNHE~ 78 (219)
T d1g5ba_ 72 VRGNHEQ 78 (219)
T ss_dssp CCCHHHH
T ss_pred ccCcHHH
Confidence 9999995
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0022 Score=52.28 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=34.1
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...+.|++|+|+|+|.+||......|...||+...|+|++.
T Consensus 79 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 79 KTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 34688999999999999999875556667899999999753
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0028 Score=50.78 Aligned_cols=38 Identities=11% Similarity=-0.008 Sum_probs=27.8
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCc--ccccceEEEEcC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGT--YIWSSEYQFKAS 278 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~--~~wS~~~~F~T~ 278 (515)
....|++|+||+.|.+||.....++. ..||+...++++
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 35678999999999999987532322 457777777664
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.005 Score=47.55 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=44.3
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
..+|....+. ..+.++++|.|....+ ....-.++|.......... .. ...+......|
T Consensus 2 ~d~P~~l~v~-~vt~~sv~l~W~~p~~-~~~~y~i~~~~~~~~~~~~-------~~-------------~~~~~~~~~~i 59 (94)
T d1j8ka_ 2 IDRPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIHEL-------FP-------------APDGEEDTAEL 59 (94)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEEEE-------CC-------------CCCSSCCEEEE
T ss_pred CCCCCCCEEE-EecCCEEEEEEeCCCc-cccceEEEEEeecCCCceE-------EE-------------ecCCCccEEEE
Confidence 3467666652 3357899999976532 1233467776543321110 00 01123345678
Q ss_pred cCCCCCCEEEEEecee
Q 010191 246 RELWPNAMYTYKLGHR 261 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (515)
+||+|||.|.++|...
T Consensus 60 ~~L~p~t~Y~~~V~a~ 75 (94)
T d1j8ka_ 60 QGLRPGSEYTVSVVAL 75 (94)
T ss_dssp CSCCCCSEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0053 Score=48.02 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=47.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCccee-cCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYS-PAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~-~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
|-+|..+++ ...+.++++|.|....+ ....-.|+|.......... ........ . ..++......
T Consensus 4 Pp~~~~l~v-~~~t~~sv~v~W~pp~~-~~~~y~i~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~ 68 (101)
T d2cuia1 4 RPRLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRE-----------L--MVPGTRHSAV 68 (101)
T ss_dssp CCCCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEE-----------E--EEETTCCEEE
T ss_pred ccCCCCcEE-EEECCCEEEEEEEeccc-cccceEEEEEecCCCceeeccCCcceeE-----------e--ecccceeEEE
Confidence 445555555 33368899999975532 1233577777654322111 00000000 0 0123345567
Q ss_pred ecCCCCCCEEEEEeceecCCC
Q 010191 245 LRELWPNAMYTYKLGHRLFNG 265 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~dg 265 (515)
|+||+|+++|.++|.....+|
T Consensus 69 v~~L~p~t~Y~~~V~a~~~~g 89 (101)
T d2cuia1 69 LRDLRSGTLYSLTLYGLRGPH 89 (101)
T ss_dssp ECSCCTTCEEEEEEEEECSSS
T ss_pred eCCCCcCCEEEEEEEEEeCCc
Confidence 899999999999998764333
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0042 Score=50.40 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=33.2
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
-....|+||+|++.|.++|......|.+.||+...|+|.+.
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 45678999999999999998765456667899999999753
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0045 Score=50.10 Aligned_cols=93 Identities=9% Similarity=0.051 Sum_probs=53.4
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+. ..+.+++.|.|........ ..-.|+|...+....... .... .+.....
T Consensus 21 P~~P~~~~~~-~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~--~~~~-----------------~~~~~~~ 80 (117)
T d1wfoa1 21 PGPPMGILFP-EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT--VEVL-----------------APSARQY 80 (117)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC--EEEE-----------------CTTCCEE
T ss_pred CcCCCCcEEE-EecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe--EEec-----------------CCceEEE
Confidence 5566666553 3357899999975532111 112566765443221100 0011 1112345
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
.|+||+|++.|.+||......|...+|+...++|.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 81 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence 68999999999999997754555556777776663
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0093 Score=45.94 Aligned_cols=87 Identities=20% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+ ...+.++++|+|....+ .-..-.|+|...++.... ... ++......|+|
T Consensus 4 ~P~~l~~-~~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~~i~~ 59 (93)
T d2cuma1 4 APRDLEA-KEVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQTQE-----ILL-----------------PGGITSHQLLG 59 (93)
T ss_dssp CCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEECTTSCEEE-----EEE-----------------CSSCSEEEECS
T ss_pred cCCCCEE-EEeCCCEEEEEEEcccc-ccccEEEEEEccccccEE-----EEE-----------------CCCccEEEEeC
Confidence 4544443 23357899999987642 123357777765432111 111 11223567999
Q ss_pred CCCCCEEEEEeceecCCCcccccceEEEEcCC
Q 010191 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p 279 (515)
|+||++|.++|..-...|.... ..-.|+|..
T Consensus 60 L~p~t~Y~~~V~a~~~~g~s~~-~~~~~tT~g 90 (93)
T d2cuma1 60 LFPSTSYNARLQAMWGQSLLPP-VSTSFTTGG 90 (93)
T ss_dssp CCTTCEEEEEEEEEBTTBCCCC-EEEEEECCC
T ss_pred ccCCCEEEEEEEEEeCCCCCCC-EEEEEEeCC
Confidence 9999999999987643332221 234666644
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0026 Score=53.18 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=33.2
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
...+|+||+|+|.|.+||......|...||+...|+|++.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 4568999999999999999875566667888899999754
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.0069 Score=46.26 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=43.4
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|....+ ...+.++++|.|.-..+ .-..-.|+|...++....... ..++-.....|+|
T Consensus 3 aP~nl~v-~~~~~~s~~l~W~~p~~-~i~~Y~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 60 (89)
T d1fnha3 3 APSNLRF-LATTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEATITG 60 (89)
T ss_dssp CCEEEEE-EEEETTEEEEEEECCSS-CCSEEEEEEECTTSCCEECTT--------------------CCCTTCCEEEEES
T ss_pred cCcCCEE-EEecCCEEEEEEeCCCc-CCceEEEEEeeccCCccEEEE--------------------EcCCCccEEEEEe
Confidence 4655555 23357899999986532 112347777765443211000 0012234568999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+||+.|.++|..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnha3 61 LEPGTEYTIYVIAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999876
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.28 E-value=0.0052 Score=48.33 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=44.4
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+. ..+.++++|.|.-...... ..-.|+|...++..+...... +.....
T Consensus 2 P~~P~~~~v~-~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~--------------------~~~~~~ 60 (98)
T d1x5ya1 2 TSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKE--------------------PVERCG 60 (98)
T ss_dssp CCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSS--------------------CBSSSE
T ss_pred CCCCcCcEEE-EccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeeee--------------------cCceeE
Confidence 4456666553 3357899999985432111 123667776654433221100 111124
Q ss_pred EEecCCCCCCEEEEEeceec
Q 010191 243 GFLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.+++||+||+.|.|||....
T Consensus 61 ~~v~~L~~~~~Y~frV~A~n 80 (98)
T d1x5ya1 61 FTVKDLPTGARILFRVVGVN 80 (98)
T ss_dssp EEEECCCTTCCEEEEEEEEE
T ss_pred EEECCCcCCeEEEEEEEEEC
Confidence 57899999999999999763
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0088 Score=45.76 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=43.5
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|...++ ...+.++++|.|....+..-..-.|+|...++.... ...+. ++....+.|+|
T Consensus 3 pP~~l~~-~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (91)
T d1fnfa2 3 PPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV---AELSI-----------------SPSDNAVVLTN 61 (91)
T ss_dssp CCEEEEE-ESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCC---EEEEE-----------------CTTCCEEEECS
T ss_pred cCCceEE-EEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccE---EEEEe-----------------CCCceEEEEec
Confidence 3554554 233689999999875431112236788765433211 00111 12234568999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+|+++|.++|..-
T Consensus 62 L~p~t~Y~~~V~a~ 75 (91)
T d1fnfa2 62 LLPGTEYVVSVSSV 75 (91)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred eeCCCEEEEEEEEE
Confidence 99999999999865
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0085 Score=46.00 Aligned_cols=73 Identities=16% Similarity=0.153 Sum_probs=44.3
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|..+++. ..+.++++|.|....+ .-..-.|+|...++.... ... .++-.....|+
T Consensus 3 spP~~l~v~-~~~~~si~v~W~~p~~-~~~~Y~i~~~~~~~~~~~----~~~-----------------~~~~~~~~~i~ 59 (90)
T d1fnha2 3 SPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRT-----------------IKPDVRSYTIT 59 (90)
T ss_dssp CCCEEEEEE-EECSSEEEEEEECCSS-CCCCEEEEEEESSSSCCE----EEE-----------------CCTTCSEEEEE
T ss_pred CcCCCCEEE-EecCCEEEEEEECCCC-CCceeEEEEEEccCCceE----EEe-----------------cCCCccEEEeC
Confidence 356666653 3468999999986532 122346777654432111 001 01223455789
Q ss_pred CCCCCCEEEEEeceec
Q 010191 247 ELWPNAMYTYKLGHRL 262 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (515)
||+||++|.++|....
T Consensus 60 ~L~p~t~Y~~~V~a~~ 75 (90)
T d1fnha2 60 GLQPGTDYKIYLYTLN 75 (90)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CCCCCcEEEEEEEEEe
Confidence 9999999999998763
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.0042 Score=48.81 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=43.3
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|.-+.+. ..+.++++|.|.-...... ..-.|+|............ ...... ..+-....
T Consensus 3 P~~P~~~~~~-~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~ 66 (103)
T d1qg3a2 3 PSEPGRLAFN-VVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGP-MKKVLV--------------DNPKNRML 66 (103)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSC-CEEEEE--------------CCTTCCEE
T ss_pred CccCCCcEEE-EecCCEEEEEEEECccCCCCceEEEEEeeccccccccccc-eEEEEe--------------cCCCceEE
Confidence 4456655552 2357899999986543111 1124566544322111100 001000 01122457
Q ss_pred EecCCCCCCEEEEEeceec
Q 010191 244 FLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.++||+|+++|.+||..-.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n 85 (103)
T d1qg3a2 67 LIENLRESQPYRYTVKARN 85 (103)
T ss_dssp EECCCCTTCCEEEEEEEEE
T ss_pred EEeecCCCCEEEEEEEEEc
Confidence 8999999999999998763
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.19 E-value=0.0043 Score=47.39 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=44.1
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+.. .+.++++|.|....+ .-..-.|+|...++.... .... +-.-.+.|+|
T Consensus 3 ~P~nl~v~~-~~~~s~~l~W~~p~~-~~~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~~~~~~~ 58 (86)
T d1tdqa3 3 SPRDLMVTA-SSETSISLIWTKASG-PIDHYRITFTPSSGISSE-----VTVP-----------------RDRTSYTLTD 58 (86)
T ss_dssp CCEEEEEEE-ECSSCEEEEEECCCS-CCSEEEEEEECSSSCCEE-----EEEE-----------------SSCSEEEECC
T ss_pred cCCCCEEEE-ecCCEEEEEEeCCCC-CccceEEEEecccccceE-----EEeC-----------------CCccEEEECC
Confidence 455555532 357899999987643 222347888765443211 1111 1123568999
Q ss_pred CCCCCEEEEEeceec
Q 010191 248 LWPNAMYTYKLGHRL 262 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (515)
|+||+.|.++|....
T Consensus 59 L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 59 LEPGAEYIISITAER 73 (86)
T ss_dssp CCTTCCEEEEEEEEE
T ss_pred CccccEEEEEEEEEc
Confidence 999999999998763
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.0074 Score=47.46 Aligned_cols=87 Identities=14% Similarity=0.020 Sum_probs=47.4
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC---CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
|.+|..+.+. ..+.++++|+|.-...... ..-.++|.......+..... .......
T Consensus 3 p~pP~~p~~~-~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 61 (104)
T d1bpva_ 3 IDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF--------------------SNILENE 61 (104)
T ss_dssp CCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC--------------------SCCCSSE
T ss_pred CCCCCCCEEE-EecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe--------------------eccceeE
Confidence 3456666553 3356899999975422111 12356666543332211100 0112234
Q ss_pred EEecCCCCCCEEEEEeceecCCCc-ccccceE
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGT-YIWSSEY 273 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~-~~wS~~~ 273 (515)
..++||+|+|+|.|||......|. ..+|+.-
T Consensus 62 ~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s 93 (104)
T d1bpva_ 62 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPS 93 (104)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEECCCCCCCCcCCC
Confidence 578999999999999998633332 2344443
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0074 Score=46.10 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=42.9
Q ss_pred CCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 010191 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (515)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL 248 (515)
|..+.+ ...+.++++|.|..... ....-.++|......... ..... +.-.-..+|+||
T Consensus 3 P~~l~~-~~v~~~si~l~W~~p~~-~~~~~~i~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~L 60 (90)
T d1fnha1 3 PTDLKF-TQVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVVSGL 60 (90)
T ss_dssp CEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEESSSCSCC---CEEEE-----------------CTTCCEEEECSC
T ss_pred CCCEEE-EEecCCEEEEEEEccce-eccceEEEEEeeeCCCce---EEEEe-----------------CCCCeEEEEecc
Confidence 444444 23368999999987643 223456777654332211 01110 111124689999
Q ss_pred CCCCEEEEEeceec
Q 010191 249 WPNAMYTYKLGHRL 262 (515)
Q Consensus 249 ~Pgt~Y~Yrv~~~~ 262 (515)
+||++|.++|....
T Consensus 61 ~p~t~Y~~~V~a~n 74 (90)
T d1fnha1 61 MVATKYEVSVYALK 74 (90)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCceEEEEEEEEEe
Confidence 99999999999764
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.08 E-value=0.019 Score=46.70 Aligned_cols=109 Identities=9% Similarity=0.066 Sum_probs=58.4
Q ss_pred CCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEE
Q 010191 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (515)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~ 242 (515)
.|.+|..+.+.. ..+++.|+|.-...... ..-.|+|...+.......... .+.+ .|..+.... ...+..-.
T Consensus 7 ~P~aP~~v~v~~--~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~-~~~~--~~~~~~~~~--~~~~~~~~ 79 (123)
T d1wfta_ 7 GPGAPSTVRISK--NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQL-VFMR--IYCGLKTSC--TVTAGQLA 79 (123)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCC-EEEE--EEEESCSEE--EEEHHHHT
T ss_pred CCcCCcccEEEe--CCCEEEEEecCchhcCCceEEEEEEEEECCCCCcccccee-eeEE--EecCCceeE--eecCCccE
Confidence 456676666643 46889999986532111 124677766544321111100 0110 000000000 00111112
Q ss_pred EEecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
..+.+|+|++.|.+||......|...||+...|+|...
T Consensus 80 ~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 80 NAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp TCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred EEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 35789999999999999875555556788888988654
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.04 E-value=0.01 Score=45.34 Aligned_cols=71 Identities=21% Similarity=0.203 Sum_probs=43.5
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|....+ ...+.++++|+|....+ .-..-.|+|...+..... ..++. +....+.|+|
T Consensus 3 ~P~~l~v-~~v~~~s~~l~W~~~~~-~~~~Y~i~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~~ 59 (88)
T d1qr4a2 3 SPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVPITGGTPN----VVTVD-----------------GSKTRTKLVK 59 (88)
T ss_dssp CCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEETTCCCCE----EEEEE-----------------TTCCEEEECS
T ss_pred CCcceEE-EEecCCEEEEEEEcccE-eeceEEEEEEeccCCceE----EEEec-----------------CCccEEEECC
Confidence 4555544 23358999999976532 123347777765443211 11111 1224568999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+||++|.++|..-
T Consensus 60 L~p~t~Y~~~V~a~ 73 (88)
T d1qr4a2 60 LVPGVDYNVNIISV 73 (88)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 99999999999876
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.03 E-value=0.013 Score=46.20 Aligned_cols=84 Identities=15% Similarity=0.084 Sum_probs=46.5
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+ ...+.+++.|.|......+. ..-.|+|...+..... ..... ++-....
T Consensus 11 P~~p~~l~~-~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~---~~~~~-----------------~~~~~~~ 69 (106)
T d1wfna1 11 PGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTR---VTHYL-----------------PNVTLEY 69 (106)
T ss_dssp CCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGC---CCEEE-----------------CSSCCEE
T ss_pred CcCCCCcEE-EEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcce---EEEec-----------------CCCeeEE
Confidence 556666665 33467899999976542111 1124566544321110 00010 1223456
Q ss_pred EecCCCCCCEEEEEeceecCCCccccc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWS 270 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS 270 (515)
.|+||+|+++|.++|......|...+|
T Consensus 70 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s 96 (106)
T d1wfna1 70 RVTGLTALTTYTIEVAAMTSKGQGQVS 96 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEEE
T ss_pred EEccCCCCCEEEEEEEEECCCCCcCCc
Confidence 789999999999999865333433333
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0081 Score=49.11 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=54.6
Q ss_pred cCCCCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeE
Q 010191 163 FTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (515)
Q Consensus 163 ~~~~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~ 240 (515)
+.-|.+|..+.+. ..+.+++.|.|.-...... ..-.++|...+....... .... ....
T Consensus 14 ~d~P~~P~~~~v~-~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~ 73 (127)
T d1ueya_ 14 YDVPNPPFDLELT-DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH--HQTE-----------------VSGT 73 (127)
T ss_dssp CCSCCCCEEEEEE-CCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE--EEEE-----------------EESS
T ss_pred cccCcCCCCcEEE-EecCCeEEEEEeCCcccccceEeeeeeeccccccceeEE--EEee-----------------cCCc
Confidence 3456677766663 3357899999986543111 122444443332211100 0000 0112
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCcccccce-EEEEcCCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPY 280 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~-~~F~T~p~ 280 (515)
+...+.+|+|+++|.+||......|...||+. ..|+|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 33567899999999999987754455556644 45666654
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.99 E-value=0.016 Score=45.80 Aligned_cols=93 Identities=13% Similarity=0.106 Sum_probs=52.2
Q ss_pred ccCCCCCCCcceeee-cCCCCeEEEEEEeCCCCCC-C----ccEEEEccCCCCcceecCcceEEeccccCCCCCcccccc
Q 010191 162 TFTNPNAPVYPRLAQ-GKVWNEMTVTWTSGYGINE-A----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWR 235 (515)
Q Consensus 162 ~~~~~~~P~~~~La~-~~~~~~m~V~W~t~~~~~~-~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~ 235 (515)
.+.-|.+|..+.+.. ....++++|+|........ . .-.++|...+...+.. ...
T Consensus 4 ~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~-----~~~--------------- 63 (109)
T d1uc6a_ 4 GSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH-----VEL--------------- 63 (109)
T ss_dssp TSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC-----EEE---------------
T ss_pred CCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEE-----ecc---------------
Confidence 344577787777754 3357899999987642111 1 1234444433322211 010
Q ss_pred CCCeEEEEEecCCCCCCEEEEEeceecCCCcc---cccceEEEEc
Q 010191 236 DPGYIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKA 277 (515)
Q Consensus 236 ~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~---~wS~~~~F~T 277 (515)
+......|.+|+|+|.|.+||.... ++.. .||+....+|
T Consensus 64 --~~~~~~~i~~L~~~t~Y~~rVrA~~-~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 64 --SNGTAHTITDAYAGKEYIIQVAAKD-NEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --SSCSEEEETTCCSSSCEEEEEECCB-SSSCCCCCCCEEEEECC
T ss_pred --CCceeEEeCCCCCCCEEEEEEEEEE-CCCCCcCCCCCCEEeEC
Confidence 1123456899999999999998743 2222 4555555543
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.98 E-value=0.0064 Score=47.63 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=42.6
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|..+.+.. ..++++|.|.-+.+... ..-.|+|............. .... -.+..
T Consensus 6 P~~P~~~~v~~--~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~ 64 (100)
T d1cfba1 6 PNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY-EKVP------------------NTDSS 64 (100)
T ss_dssp CCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE-EEEE------------------TTCSE
T ss_pred CCcCcCcEEEE--cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEe-eecC------------------CceEE
Confidence 56676666543 45789999986543111 12366666543322111100 0000 01224
Q ss_pred EecCCCCCCEEEEEeceec
Q 010191 244 FLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
.+++|+|++.|.+||....
T Consensus 65 ~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 65 FVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp EEEECCSSEEEEEEEEEEE
T ss_pred EEecCCCCCEEEEEEEEEe
Confidence 5789999999999998763
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.96 E-value=0.01 Score=45.79 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=44.7
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
.+|..+.+.. ...++++|.|.-... ....-.|+|...++.... ..+. .++.....+++
T Consensus 5 ~~P~~l~v~~-v~~~si~v~W~~p~~-~~~~y~i~~~~~~~~~~~-----~~~~---------------~~~~~~~~~i~ 62 (93)
T d1tdqa1 5 DGPTQILVRD-VSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK-----TTFR---------------LQPPLSQYSVQ 62 (93)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC-----EEEE---------------ECTTCSEEEEC
T ss_pred CcCCCCEEEE-eCCCEEEEEEEcccc-CCCceEEEEEeccCccee-----eEEE---------------eCCCceEEEEe
Confidence 3566666533 356899999986532 223347777765432211 1111 11223456899
Q ss_pred CCCCCCEEEEEeceec
Q 010191 247 ELWPNAMYTYKLGHRL 262 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~ 262 (515)
||+||++|.++|..-.
T Consensus 63 ~L~p~t~Y~v~V~a~~ 78 (93)
T d1tdqa1 63 ALRPGSRYEVSISAVR 78 (93)
T ss_dssp SCCTTCEEEEEEEEEE
T ss_pred CcccceEEEEEEEEEe
Confidence 9999999999998763
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.016 Score=44.65 Aligned_cols=73 Identities=8% Similarity=-0.125 Sum_probs=42.3
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|..+.+ ...+.++++|.|....+..-..-.|+|...++..... ... .++-.....|+|
T Consensus 8 ~P~~l~v-~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~-----~~~---------------~~~~~t~~~i~~ 66 (95)
T d2fnba_ 8 QLTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIF-----EDF---------------VDSSVGYYTVTG 66 (95)
T ss_dssp CCTTCEE-ECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEE-----EEE---------------CCSSCSEEEECC
T ss_pred cCCCeEE-EEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEE-----EEE---------------eCCCCeEEEEec
Confidence 4555554 3346899999997653211122356666543322110 000 012233567999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+||+.|.++|...
T Consensus 67 L~p~t~Y~~~V~a~ 80 (95)
T d2fnba_ 67 LEPGIDYDISVITL 80 (95)
T ss_dssp CCTTSEEEEEEEEE
T ss_pred ccCCEEEEEEEEEE
Confidence 99999999999876
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.016 Score=44.07 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=44.0
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~g 247 (515)
+|....+. .-+.++++|.|....+ ....-.|+|...+...... .... ++-.....|+|
T Consensus 3 ~P~~l~v~-~vt~~sv~l~W~~p~~-~~~~Y~i~~~~~~~~~~~~---~~~v-----------------~~~~~~~~i~~ 60 (89)
T d1fnfa3 3 SPTGIDFS-DITANSFTVHWIAPRA-TITGYRIRHHPEHFSGRPR---EDRV-----------------PHSRNSITLTN 60 (89)
T ss_dssp CCEEEEEE-SCCSSEEEEEEECCSS-CCSEEEEEEECSCCSSCCE---EEEE-----------------ETTCCEEEEES
T ss_pred cCcCCEEE-EecCCEEEEEEEeCCC-EEeeEEEEEEECCCCCceE---EEEE-----------------CCCccEEEECC
Confidence 46555542 3358999999987542 1123357887654332110 1111 12234568999
Q ss_pred CCCCCEEEEEecee
Q 010191 248 LWPNAMYTYKLGHR 261 (515)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (515)
|+|++.|.++|..-
T Consensus 61 L~p~t~Y~~~V~a~ 74 (89)
T d1fnfa3 61 LTPGTEYVVSIVAL 74 (89)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CcccCEEEEEEEEE
Confidence 99999999999876
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.017 Score=46.23 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=50.0
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
|.+|...++..+ .+++.|.|.-...... ..-.|+|+..+..... ... .+.....
T Consensus 21 P~~P~~~~~~~~--~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~~-----~~~-----------------~~~~~~~ 76 (113)
T d1x5ia1 21 PEVPSSLHVRPL--VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQT-----IKV-----------------DYKQRYY 76 (113)
T ss_dssp CCSCSEEEEEEE--TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGEE-----EEC-----------------CTTCCEE
T ss_pred CCCCEeeeeeeC--CCEEEEEEEccccCCccEEEEEEEeeecccccee-----eee-----------------eCCccEE
Confidence 456666665433 4799999986532111 1125666654332111 110 1223456
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEcCCC
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~p~ 280 (515)
+|.+|+|++.|.+||......|.... -.-.++|.|.
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~-~~~~~~T~P~ 112 (113)
T d1x5ia1 77 TIENLDPSSHYVITLKAFNNVGEGIP-LYESAVTRPH 112 (113)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCC-CCCCEECCCC
T ss_pred EEeccccCcEEEEEEEEECCCcCCCC-eeeEEEeCCC
Confidence 79999999999999987633332221 1245777663
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.016 Score=44.40 Aligned_cols=63 Identities=19% Similarity=0.275 Sum_probs=39.1
Q ss_pred CCCeEEEEEEeCCCCCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEe
Q 010191 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKL 258 (515)
Q Consensus 179 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv 258 (515)
+.++++|.|....+ ....-.|+|...++.... ..... ++-...+.|+||+||++|.++|
T Consensus 9 t~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAV-TVRYYRITYGETGGNSPV---QEFTV-----------------PGSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSS-CCSEEEEEEEETTCCSCC---EEEEE-----------------ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccce-EecEEEEEEEcCCCCcee---EEEEe-----------------CCCccEEEeCCCCCCCEEEEEE
Confidence 57899999976532 122347777765433211 00111 1122356899999999999999
Q ss_pred ceec
Q 010191 259 GHRL 262 (515)
Q Consensus 259 ~~~~ 262 (515)
..-.
T Consensus 68 ~a~~ 71 (91)
T d1fnaa_ 68 YAVT 71 (91)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8763
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.011 Score=46.08 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCCCC------ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCe
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEA------EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~~~------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~ 239 (515)
|.+|..+.+....+.+.+.|.|......... .-.|+|...+...+... ...
T Consensus 2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~----~~~------------------- 58 (94)
T d3d85d3 2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VFT------------------- 58 (94)
T ss_dssp CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EEE-------------------
T ss_pred CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEe----ccc-------------------
Confidence 6678877776665667899999987532211 23566665443322111 000
Q ss_pred EEEEEecCCCCCCEEEEEeceecCCCcccccceE
Q 010191 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (515)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~ 273 (515)
..++..|.||+.|.+||......+.+.||+.-
T Consensus 59 --~~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeWS 90 (94)
T d3d85d3 59 --DKTSATVICRKNASISVRAQDRYYSSSWSEWA 90 (94)
T ss_dssp --SSSEEEECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred --cceEEEecCCCCEEEEEEEecCCCCCCCccCc
Confidence 00123588999999999987544555677643
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.024 Score=43.44 Aligned_cols=78 Identities=12% Similarity=0.130 Sum_probs=44.1
Q ss_pred CCCCeEEEEEEeCCCCCC--CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 010191 178 KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (515)
Q Consensus 178 ~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (515)
...++++|.|.-...... ..-.|+|...+...+.. ..+. +-.....|+||+|++.|.
T Consensus 11 ~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~----~~~~-----------------~~~~~~~i~~L~p~t~Y~ 69 (94)
T d2dn7a1 11 TAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDFG-----------------KDDQHFTVTGLHKGTTYI 69 (94)
T ss_dssp CSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEEE-----------------TTCCEEEEECCCTTCEEE
T ss_pred EeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEE----EEcC-----------------CCccEEEEEccCCeeEEE
Confidence 357899999987543111 12356776554332211 1111 112345689999999999
Q ss_pred EEeceecCCCcccccceEEEEc
Q 010191 256 YKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 256 Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
+||......|...+|+ -.+.|
T Consensus 70 ~~V~A~n~~G~g~~s~-~~~~T 90 (94)
T d2dn7a1 70 FRLAAKNRAGLGEEFE-KEIRT 90 (94)
T ss_dssp EEEEEEETTEEEEEEE-EEEEC
T ss_pred EEEEEEcCCcCCCCcc-EEEee
Confidence 9999764344333343 34444
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.25 E-value=0.05 Score=42.69 Aligned_cols=83 Identities=11% Similarity=-0.006 Sum_probs=44.8
Q ss_pred CCCCcceeeecCCCCeEEEEEEeCCCCC-CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 010191 167 NAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (515)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l 245 (515)
.+|..+..-.....++|+++|.-+.+.. +..-.+.|............ ..... .. ..........+
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~-~~~~~-----~~-------~~~~~~~~~~~ 72 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGD-TIPDC-----VA-------KKRQNNCSIPR 72 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCC-EEEEE-----EC-------CTTCCEEEEEG
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeee-eeeee-----cc-------ccCccccEEEc
Confidence 3444443212335789999998765422 12235566544322111100 00000 00 11234567889
Q ss_pred cCCCCCCEEEEEeceec
Q 010191 246 RELWPNAMYTYKLGHRL 262 (515)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (515)
++|+|++.|.+||....
T Consensus 73 ~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 73 KNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp GGCCTTSCEEEEEEEEE
T ss_pred CCCCcCceEEEEEEEEe
Confidence 99999999999999763
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.22 E-value=0.016 Score=45.20 Aligned_cols=70 Identities=17% Similarity=0.092 Sum_probs=37.2
Q ss_pred eeeecCCCCeEEEEEEeCCCCCCC---ccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEecCCC
Q 010191 173 RLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELW 249 (515)
Q Consensus 173 ~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~gL~ 249 (515)
.|....+.+++.|.|......... .-.|+|....+.... ....+ .+--....|.+|+
T Consensus 10 ~l~v~~~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~--~~~~~------------------~~~~~~~~l~~L~ 69 (100)
T d2gysa4 10 SLQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKD--SKTET------------------LQNAHSMALPALE 69 (100)
T ss_dssp EEEEC---CCCEEEEEC--------CEEEEEEEECSSSCSTT--SCEEE------------------EESCSEEECCCCC
T ss_pred ccEEEECCCEEEEEEecCcccCCccceEEEEEEeecccceec--eeecc------------------cCCceEEEeCCCC
Confidence 355566678899999877532111 245666654332111 00011 0112457899999
Q ss_pred CCCEEEEEeceec
Q 010191 250 PNAMYTYKLGHRL 262 (515)
Q Consensus 250 Pgt~Y~Yrv~~~~ 262 (515)
||+.|.+||....
T Consensus 70 p~t~Y~~rVRa~~ 82 (100)
T d2gysa4 70 PSTRYWARVRVRT 82 (100)
T ss_dssp SSCCCEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9999999998763
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.20 E-value=0.09 Score=48.27 Aligned_cols=170 Identities=15% Similarity=0.185 Sum_probs=94.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCc---hhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~ 362 (515)
.|++++||.=- ..-.+.+++.+.+ .++.|||+..|..+ +.|. ....+++++. .+-
T Consensus 1 MkiLfiGDIvG-------------~~Gr~~v~~~Lp~Lk~~~DfVIaNgENa-a~G~Git~k~~~~L~~~------GVD- 59 (252)
T d2z06a1 1 MRVLFIGDVMA-------------EPGLRAVGLHLPDIRDRYDLVIANGENA-ARGKGLDRRSYRLLREA------GVD- 59 (252)
T ss_dssp CEEEEECCBCH-------------HHHHHHHHHHHHHHGGGCSEEEEECTTT-TTTSSCCHHHHHHHHHH------TCC-
T ss_pred CeEEEEeccCC-------------HHHHHHHHHHhHHHHhhCCEEEEeeecc-CCCcCCCHHHHHHHHHh------CCC-
Confidence 47999999821 1122333333332 24589999999998 5554 3333444332 232
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCC--CCcCCCHHHHHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHC 440 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~g~~Q~~WL~~~ 440 (515)
.++.|||=++..+--.+.+ + .+...-.++|...++.-|+.|+.++.++.++|-. ....+...=.+=+++.
T Consensus 60 vIT~GNH~wdkkei~~~i~------~--~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~ 131 (252)
T d2z06a1 60 LVSLGNHAWDHKEVYALLE------S--EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRL 131 (252)
T ss_dssp EEECCTTTTSCTTHHHHHH------H--SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHH
T ss_pred EEEcCcccccchhhhhhhc------c--ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHH
Confidence 4788999876432211100 0 0111112345555566688899888777777632 2212222222334444
Q ss_pred HhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 441 La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
|++ .+.+.+||=+|.=. + . -+.-+-.+.+-+|.+|+-=|+|.---
T Consensus 132 ~~~---~~~~~i~VDfHaEa--T-----------S----EK~A~g~~ldGrvsavvGTHTHV~Ta 176 (252)
T d2z06a1 132 LEE---EKADYVLVEVHAEA--T-----------S----EKMALAHYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp HHH---CCCSEEEEEEECSC--H-----------H----HHHHHHHHHBTTBSEEEEESSCSCBS
T ss_pred Hhh---cCccEEEEEcccch--h-----------h----hheeeeEecCCCEEEEEecCcccccc
Confidence 444 35667888888532 0 0 22334566778999999999998543
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=94.51 E-value=0.19 Score=46.15 Aligned_cols=172 Identities=10% Similarity=0.069 Sum_probs=93.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHh-cCCCCEEEEcCccccCCCc---hhHHHHHHHHHhhhhcCCCE
Q 010191 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 287 ~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~-~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~ 362 (515)
.|++++||.=- ..-.+.+++.+.+ .++.|||+..|..+ +.|. ....+++++. .+-
T Consensus 1 MkILfiGDIvG-------------~~Gr~~v~~~Lp~lk~~~DfVIaNgENa-a~G~Git~~~~~~l~~~------GvD- 59 (255)
T d1t70a_ 1 MRVLFIGDVFG-------------QPGRRVLQNHLPTIRPQFDFVIVNMENS-AGGFGMHRDAARGALEA------GAG- 59 (255)
T ss_dssp CEEEEECCBBH-------------HHHHHHHHHHHHHHGGGCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCS-
T ss_pred CeEEEEecCCC-------------HHHHHHHHHHhHHHHhhCCEEEECCccC-CCCcCCCHHHHHHHHHc------CCc-
Confidence 47999999821 1123334433332 23589999999999 5554 2333343332 232
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCC-CCCCceEEEEEeCCEEEEEEcC--CCCcCCCHHHHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT-ENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEH 439 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~g~~Q~~WL~~ 439 (515)
.++.|||=++..+--.+.+. |.. ....-.++|. ..++.-|+.++..+.++.+++- +....+-..=.+=+++
T Consensus 60 viT~GNH~wdkkei~~~i~~-----~~~-~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~ 133 (255)
T d1t70a_ 60 CLTLGNHAWHHKDIYPMLSE-----DTY-PIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDA 133 (255)
T ss_dssp EEECCTTTTSSTTHHHHHHT-----TCS-CEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHH
T ss_pred EEEcCchhhcchhHHHHHhh-----cch-hhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHH
Confidence 47889998764321111100 000 0011112332 2345667888888877777763 2222222223344566
Q ss_pred HHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCccccccc
Q 010191 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (515)
Q Consensus 440 ~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeR 505 (515)
.|++ .+.+.+||=+|.=. + . -+.-+-.+.+-+|.+|+-=|+|.---
T Consensus 134 ~l~~---~~~~~i~VDfHaEa--T-----------S----EK~A~g~~ldGrvsav~GTHTHV~Ta 179 (255)
T d1t70a_ 134 LLER---DDLGTVFVDFHAEA--T-----------S----EKEAMGWHLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp HTTC---SSCCEEEEEEECSC--H-----------H----HHHHHHHHHTTSSSEEEEESSCSCBS
T ss_pred HHhh---cCCCeEEEEccchh--H-----------H----HHHHHHhhhcCcEEEEEecCcccccc
Confidence 6665 35566888888532 0 0 22334566678899999999998553
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.38 E-value=0.0064 Score=49.42 Aligned_cols=93 Identities=11% Similarity=0.037 Sum_probs=53.9
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCC----CCCCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYG----INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h 241 (515)
|.+|..+.+......+++.|+|.-... .......+.|....+..... ... + -.+-..
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~-----~~~--~------------~~~~~~ 71 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVA-----EVI--F------------PTADST 71 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEE-----EEC--C------------TTCSEE
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccce-----eee--e------------ecccee
Confidence 345555554333456799999975311 11223467776432211100 000 0 012345
Q ss_pred EEEecCCCCCCEEEEEeceecCCCcccccceEEEEc
Q 010191 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
...|+||+|+++|.+||......|...+|+.-.++|
T Consensus 72 ~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 72 AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 678999999999999999876566666777766665
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.95 E-value=0.072 Score=42.54 Aligned_cols=34 Identities=12% Similarity=-0.091 Sum_probs=25.9
Q ss_pred EecCCCCCCEEEEEeceecCCCcccccceEEEEc
Q 010191 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T 277 (515)
.+.+|+|+++|.+||......|...+|+...+.+
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~ 108 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEec
Confidence 4568999999999999765556666787766643
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.88 E-value=0.038 Score=44.73 Aligned_cols=41 Identities=12% Similarity=-0.050 Sum_probs=28.9
Q ss_pred CeEEEEEecCCCCCCEEEEEeceecCCCc-----ccccceEEEEcC
Q 010191 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT-----YIWSSEYQFKAS 278 (515)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~-----~~wS~~~~F~T~ 278 (515)
+......|+||+|+|+|.++|..-...|. +..|+...|+|+
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred CccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 44566789999999999999986532231 235677777764
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=93.20 E-value=0.096 Score=40.90 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=42.4
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCC--CC-C-CccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEE
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~--~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a 243 (515)
+|..+.+ ...+.++++|+|.-... .+ + ..-.|+|...+...... .... ..+.....
T Consensus 7 ~P~~v~~-~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~---~~~~----------------~~~~~~~~ 66 (105)
T d1cfba2 7 NPDNVVG-QGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWE---NNNI----------------FDWRQNNI 66 (105)
T ss_dssp CCSCCEE-ECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCE---EEEE----------------CCTTCCEE
T ss_pred CCcCeEE-EEccCCeEEEEEeCCChhhcCceEEEEEEEeeeecccccee---EEEe----------------cCCCccEE
Confidence 4666665 44467899999964211 01 1 12256666543321100 0000 11233466
Q ss_pred EecCCCCCCEEEEEeceec
Q 010191 244 FLRELWPNAMYTYKLGHRL 262 (515)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~ 262 (515)
+|++|+|++.|.++|....
T Consensus 67 ~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 67 VIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp EECSCCSSCEEEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEEEe
Confidence 8999999999999998763
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.01 E-value=0.012 Score=46.38 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=30.4
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcccccceEEEEcC
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F~T~ 278 (515)
..+...|.+|+|++ |.+||......|...||+...|.|+
T Consensus 61 ~~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 61 LERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CTTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred ceEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 34556789999975 9999987655566678988899885
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=92.14 E-value=1.1 Score=41.44 Aligned_cols=180 Identities=13% Similarity=0.026 Sum_probs=93.3
Q ss_pred ceEEEEEeecCCCCCCCCCcccccccCcHHHHHHHHHhcCCCCEEEEcCccccCCCc---hhHHHHHHHHHhhhhcCCCE
Q 010191 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY---ISQWDQFTAQIEPIASTVPY 362 (515)
Q Consensus 286 ~~rf~v~gD~g~~~~~g~~~y~~~~~~~~~~~~~l~~~~~~pDfVl~~GDi~y~~g~---~~~wd~f~~~i~~l~~~vP~ 362 (515)
..|++++||.=-.. |. ....+.+.++.++ .++|||+..|-.+ +.|. ....+++++. .+-
T Consensus 4 ~MkILfiGDIvG~~--GR-------~~v~~~Lp~Lr~~-~~iDfVIaNgENa-a~G~Git~k~~~eL~~~------GvD- 65 (281)
T d1t71a_ 4 SIKFIFLGDVYGKA--GR-------NIIKNNLAQLKSK-YQADLVIVNAENT-THGKGLSLKHYEFLKEA------GVN- 65 (281)
T ss_dssp CCEEEEECEEBHHH--HH-------HHHHTTHHHHHHH-HTCSEEEEECTBT-TTTSSCCHHHHHHHHHH------TCC-
T ss_pred cceEEEEEccCCHH--HH-------HHHHHHhHHHHHH-hCCCEEEECCccC-CCCcCCCHHHHHHHHHh------CCc-
Confidence 47999999982110 00 0011234444444 5899999999998 5554 2333333322 232
Q ss_pred EEccCCCCCCCCCCCCCCCCCCCCCcccccccceeccCCCCCCceEEEEEeCCEEEEEEcCCC--CcCC--CHHHHHHHH
Q 010191 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ--DWRE--GTEQYRFIE 438 (515)
Q Consensus 363 ~~v~GNHE~~~~~~g~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~--~~~~--g~~Q~~WL~ 438 (515)
.++.|||=++..+.-.+.. .....-.|..---..|....++-|..++.++..+.+++-.- ...+ -.....-++
T Consensus 66 vIT~GNH~wd~kei~~~i~---~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~ 142 (281)
T d1t71a_ 66 YITMGNHTWFQKLDLAVVI---NKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLK 142 (281)
T ss_dssp EEECCTTTTCCGGGHHHHT---TCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHH
T ss_pred EEEcCchhhhchhhHHHHh---hcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHH
Confidence 4788999765322111110 00000001110001233334566888888876777666432 1111 112233344
Q ss_pred HHHhcccCCCCCEEEEEeccCCcCCCCCCCccCCCCCchhhHHHHHHHHHhcCCeEEEeCcccccccc
Q 010191 439 HCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (515)
Q Consensus 439 ~~La~~~r~~~pwiIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~Ll~k~~VdlvlsGH~H~YeRt 506 (515)
+.+.. .+.+.+||=+|.=. + .| +.-.-.+.+-+|.+|+-=|+|.----
T Consensus 143 ~~~~~---~~~d~i~VDfHaEA--T-----------SE----K~A~g~~lDGrvsaVvGTHTHV~TaD 190 (281)
T d1t71a_ 143 ELILK---RDCDLHIVDFHAET--T-----------SE----KNAFCMAFDGYVTTIFGTHTHVPSAD 190 (281)
T ss_dssp HHHTT---CCCSEEEEEEECSC--H-----------HH----HHHHHHHHTTTSSEEEEESSSSCCTT
T ss_pred Hhhcc---cCCCeEEEEeccch--h-----------hh----hhhheeeeCCcEEEEEecCcccccCc
Confidence 44443 46777888888532 0 01 23345566788999999999986533
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.85 E-value=0.12 Score=39.43 Aligned_cols=75 Identities=8% Similarity=-0.117 Sum_probs=41.1
Q ss_pred CCCCCcceeeecCCCCeEEEEEEeCCCCC-CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEE
Q 010191 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (515)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~ 244 (515)
|.+|.-+.+. ..+.++|+++|.-+.+.. ...-.|+|...++.... .... + .+--...+
T Consensus 4 P~~P~n~~~~-~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~-----~~~~----~-----------~~~~~~~~ 62 (95)
T d1bqua1 4 PEKPKNLSCI-VNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----CKAK----R-----------DTPTSCTV 62 (95)
T ss_dssp CCCCEEEEEE-EETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----EECC----S-----------SCTTEEEC
T ss_pred cCCCeeeEEE-EccCCEEEEEEeCcccCCCceEEEEEEEEcccceeE-----eecc----c-----------ccceeeee
Confidence 3455555552 335789999998865421 12335566544322110 0000 0 01111235
Q ss_pred ecCCCCCCEEEEEecee
Q 010191 245 LRELWPNAMYTYKLGHR 261 (515)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~ 261 (515)
+.+|+|++.|++||...
T Consensus 63 ~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 63 DYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp SSCCCTTSCEEEEEEEE
T ss_pred eeecCCCcEEEEEEEEE
Confidence 68999999999999876
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.04 E-value=0.28 Score=46.87 Aligned_cols=24 Identities=13% Similarity=0.266 Sum_probs=21.2
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~ 502 (515)
+.++++..++++++++++=||.=.
T Consensus 232 G~~~~~~Fl~~n~l~lIIR~He~v 255 (324)
T d1s95a_ 232 GPDVTKAFLEENNLDYIIRSHEVK 255 (324)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSCC
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 478999999999999999999744
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.75 E-value=0.3 Score=45.84 Aligned_cols=36 Identities=8% Similarity=-0.026 Sum_probs=25.7
Q ss_pred hHHHHHHHHHhcCCeEEEeCccccccccccccCCcc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHNYERICPIYQWHH 514 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~YeRt~p~~~~~c 514 (515)
+.+.++..++++++++++=||.=..+-..-.++++|
T Consensus 216 g~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~~kv 251 (288)
T d3c5wc1 216 GQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNV 251 (288)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEEEGGGTE
T ss_pred CHHHHHHHHHHCCCcEEEcCCCcCCCCCeecCCCcE
Confidence 477899999999999999999855443333334443
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=90.48 E-value=0.35 Score=45.52 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=22.6
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
+.++++..+++++.++++=||.-..+
T Consensus 223 g~~~~~~Fl~~n~l~~IIR~He~~~~ 248 (294)
T d1jk7a_ 223 GAEVVAKFLHKHDLDLICRAHQVVED 248 (294)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred CHHHHHHHHHHCCCCEEEEcCccccC
Confidence 47899999999999999999986544
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.57 E-value=0.24 Score=37.70 Aligned_cols=37 Identities=8% Similarity=-0.101 Sum_probs=26.1
Q ss_pred eEEEEEecCCCCCCEEEEEeceecCCCcccccceEEE
Q 010191 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (515)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~wS~~~~F 275 (515)
......+.+|.+++.|.+||......|...|++.-.|
T Consensus 55 ~~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws~s~~f 91 (98)
T d1fyhb1 55 HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEF 91 (98)
T ss_dssp SEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCCB
T ss_pred ceeeeEecccCCCCEEEEEEEEEcCCcccCCccCCCc
Confidence 3445568999999999999998754555556544333
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.23 E-value=0.55 Score=46.81 Aligned_cols=26 Identities=8% Similarity=-0.006 Sum_probs=22.3
Q ss_pred hHHHHHHHHHhcCCeEEEeCcccccc
Q 010191 479 GRESLQKLWQKYKVDIAVFGHVHNYE 504 (515)
Q Consensus 479 ~r~~l~~Ll~k~~VdlvlsGH~H~Ye 504 (515)
+.+++...++++++++++=||.=.-+
T Consensus 248 G~~a~~~FL~~n~L~~IIR~HE~~~~ 273 (473)
T d1auia_ 248 SYPAVCEFLQHNNLLSILRAHEAQDA 273 (473)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred ChHHHHHHHHHcCCcEEEEcCcchhh
Confidence 46899999999999999999985444
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.11 E-value=0.33 Score=40.40 Aligned_cols=39 Identities=10% Similarity=-0.030 Sum_probs=28.0
Q ss_pred EEEEecCCCCCCEEEEEeceecCCCccc---ccceEEEEcCC
Q 010191 241 HTGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASP 279 (515)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~dg~~~---wS~~~~F~T~p 279 (515)
...+|+||+|+|.|.++|.....+|... .+..-.+||.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 4577999999999999998653333222 24667788876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.41 E-value=0.43 Score=36.77 Aligned_cols=85 Identities=13% Similarity=0.028 Sum_probs=47.9
Q ss_pred CCCcceeeecCCCCeEEEEEEeCCCCC-CCccEEEEccCCCCcceecCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 010191 168 APVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (515)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~t~g~~~~g~~h~a~l~ 246 (515)
+|..+++... ...++|.|.-+.+.. ...-.|||...+...+.....-.. . ...--...+.
T Consensus 6 ~P~nv~~~s~--n~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~---~--------------t~~~~~~~~~ 66 (99)
T d1y6kr1 6 SPPSVWFEAE--FFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ---T--------------LSYDLTAVTL 66 (99)
T ss_dssp CCSCEEEEEE--TTEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES---S--------------SEEECGGGGT
T ss_pred CCCcceEEEE--CCEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc---c--------------cccceeeeee
Confidence 3666666333 357899997543211 123578887665544432211000 0 0000111368
Q ss_pred CCCCCCEEEEEeceecCCCcccccc
Q 010191 247 ELWPNAMYTYKLGHRLFNGTYIWSS 271 (515)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~dg~~~wS~ 271 (515)
+|.++..|.+||......|...|++
T Consensus 67 ~l~~~~~Y~fRVrA~n~~g~S~Ws~ 91 (99)
T d1y6kr1 67 DLYHSNGYRARVRAVDGSRHSQWTV 91 (99)
T ss_dssp TGGGSSCEEEEEEEEETTEECCCEE
T ss_pred ecCCCCEEEEEEEEEcCCCcCCCcc
Confidence 8999999999999886566666764
|