Citrus Sinensis ID: 010193

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-----
MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS
ccccccccccccccccccEEEEcccccccccHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEEEcccccccHHHHHHHccccccccEEEccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccHHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccHHHHHHHHHHccccccccccccccccccccccccc
cccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccHHcccHcHHEHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHHHHcccccccccccHHHHcccccEEcc
meqsgptydsgsgggapvgvriqhnrrlpdflqsVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVfimtrprpvylvdyscykpphnlkasydkfmehskltgdfdesSLEFQRKILErsglgeetyfpeamhaippkpsmAAAREEAEQVMYGALDnlfsntnvnpkdIGILVVNcslfnptpslSAMIVNKYRlrgnirsynlggmgcsAGVIAVDLAKDLLQVNWNTYAVVVSTENitqnwyfgnkksmlipnclfrvGCSAVLLSNKRKDRRQAKYRLVHIVRThkgaddkafRCVYqeqddqgktgVSLSKELMAIAGGALktnittlgpvvlpvSEQLLFFATLVIKKLFnrnvkpyipdfklAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASrmtlhrfgntsssSIWYELAYIEAKGRMCRGHRVWqiafgsgfkCNSAVWQALqnvkpshhspwedcidnypvklis
meqsgptydsgsgggAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVllsnkrkdrrqakYRLVHIvrthkgaddkafRCVYQEqddqgktgVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTlhrfgntssssiWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNvkpshhspwedcidnypvklis
MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS
******************GVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFM******************************************************VMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQ*****TGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVK***
**************************RLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEA****CRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKL**
**************GAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS
***************APVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query515 2.2.26 [Sep-21-2011]
Q9LN49516 3-ketoacyl-CoA synthase 4 yes no 0.957 0.955 0.841 0.0
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.968 0.974 0.770 0.0
O65677487 Probable 3-ketoacyl-CoA s no no 0.935 0.989 0.689 0.0
O48780509 3-ketoacyl-CoA synthase 1 no no 0.949 0.960 0.673 0.0
Q5XEP9528 3-ketoacyl-CoA synthase 1 no no 0.943 0.920 0.637 0.0
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.939 0.973 0.619 0.0
Q38860506 3-ketoacyl-CoA synthase 1 no no 0.933 0.950 0.628 0.0
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.939 0.983 0.611 0.0
Q9FG87529 3-ketoacyl-CoA synthase 1 no no 0.932 0.907 0.646 1e-179
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.957 0.933 0.582 1e-179
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function desciption
 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/493 (84%), Positives = 462/493 (93%)

Query: 21  RIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWI 80
           +I+  R LPDFLQSVNLKYVKLGYHYLISNLLTLC  PL ++ S++ S+MN DDL+QLWI
Sbjct: 22  QIRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFPLAVVISVEASQMNPDDLKQLWI 81

Query: 81  HLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTG 140
           HLQ+NLVS++ICSAILVFGLTV++MTRPRPVYLVD+SCY PP +LKA Y +FMEHS+LTG
Sbjct: 82  HLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTG 141

Query: 141 DFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNT 200
           DFD+S+LEFQRKILERSGLGE+TY PEAMH +PP+ SMAAAREEAEQVM+GALDNLF+NT
Sbjct: 142 DFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRISMAAAREEAEQVMFGALDNLFANT 201

Query: 201 NVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDL 260
           NV PKDIGILVVNCSLFNPTPSLSAMIVNKY+LRGNIRSYNLGGMGCSAGVIAVDLAKD+
Sbjct: 202 NVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDM 261

Query: 261 LQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLV 320
           L V+ NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG SAVLLSNK +D+R++KYRLV
Sbjct: 262 LLVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYRLV 321

Query: 321 HIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQ 380
           H+VRTH+GADDKAFRCVYQEQDD G+TGVSLSK+LMAIAG  LKTNITTLGP+VLP+SEQ
Sbjct: 322 HVVRTHRGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQ 381

Query: 381 LLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRM 440
           +LFF TLV+KKLFN  VKPYIPDFKLAF+HFCIHAGGRAVIDELEKNLQL PVHVEASRM
Sbjct: 382 ILFFMTLVVKKLFNGKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRM 441

Query: 441 TLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHHS 500
           TLHRFGNTSSSSIWYELAYIEAKGRM RG+RVWQIAFGSGFKCNSA+W+AL++VKPS++S
Sbjct: 442 TLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPSNNS 501

Query: 501 PWEDCIDNYPVKL 513
           PWEDCID YPV L
Sbjct: 502 PWEDCIDKYPVTL 514

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function description
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q38860|KCS18_ARATH 3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG87|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query515
449469985514 PREDICTED: 3-ketoacyl-CoA synthase 4-lik 0.994 0.996 0.841 0.0
255538658502 acyltransferase, putative [Ricinus commu 0.961 0.986 0.864 0.0
224132320502 predicted protein [Populus trichocarpa] 0.963 0.988 0.854 0.0
15223556516 3-ketoacyl-CoA synthase 4 [Arabidopsis t 0.957 0.955 0.841 0.0
228480462525 3-ketoacyl-CoA synthase [Camellia oleife 0.963 0.944 0.828 0.0
297844920515 hypothetical protein ARALYDRAFT_472173 [ 0.957 0.957 0.837 0.0
359475340504 PREDICTED: 3-ketoacyl-CoA synthase 4-lik 0.972 0.994 0.826 0.0
224077840510 predicted protein [Populus trichocarpa] 0.963 0.972 0.830 0.0
224105387510 predicted protein [Populus trichocarpa] 0.963 0.972 0.816 0.0
357473285504 3-ketoacyl-CoA synthase [Medicago trunca 0.963 0.984 0.822 0.0
>gi|449469985|ref|XP_004152699.1| PREDICTED: 3-ketoacyl-CoA synthase 4-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/517 (84%), Positives = 479/517 (92%), Gaps = 5/517 (0%)

Query: 1   MEQSGPTY--DSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIP 58
           M++ GPT    SGSG GA   +RIQH+ RLPDFLQSVNLKYVKLGYHYLISNLLTLC +P
Sbjct: 1   MDRGGPTPVPTSGSGTGA---LRIQHSTRLPDFLQSVNLKYVKLGYHYLISNLLTLCIVP 57

Query: 59  LIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSC 118
           LI +T I+VS+MN+DD+R LW HLQ+NLVSV+ICS ++VFGLTV+ MTRPRPVYLVDYSC
Sbjct: 58  LIAVTLIEVSQMNLDDVRHLWFHLQYNLVSVIICSTVMVFGLTVYTMTRPRPVYLVDYSC 117

Query: 119 YKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSM 178
           Y+P  +LKA + +FMEHS+LTGDFD+SSLEFQRKILERSGLGEETY PEAMH IPP PSM
Sbjct: 118 YRPADDLKAPFHRFMEHSRLTGDFDDSSLEFQRKILERSGLGEETYVPEAMHCIPPTPSM 177

Query: 179 AAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIR 238
           AAAREEAEQVM+GALD LF++TNV PKDIGILVVNCSLFNPTPSLSAMIVNKY+LRGNIR
Sbjct: 178 AAAREEAEQVMFGALDKLFASTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR 237

Query: 239 SYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRV 298
           S+NLGGMGCSAGVIAVDLAKD+LQV+ NT AVVVSTENITQNWYFGNKKSMLIPNCLFRV
Sbjct: 238 SFNLGGMGCSAGVIAVDLAKDMLQVHRNTLAVVVSTENITQNWYFGNKKSMLIPNCLFRV 297

Query: 299 GCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAI 358
           G SAVLLSNK  DRR+AKYRL+HIVRTH+GADDKAFRCVYQEQDD GKTGVSLSK+LMAI
Sbjct: 298 GGSAVLLSNKSADRRRAKYRLIHIVRTHRGADDKAFRCVYQEQDDVGKTGVSLSKDLMAI 357

Query: 359 AGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGR 418
           AGGALKTNITTLGP+VLP+SEQLLFFATL++KK FN NVKPYIPDFKLAFDHFCIHAGGR
Sbjct: 358 AGGALKTNITTLGPLVLPISEQLLFFATLLVKKFFNGNVKPYIPDFKLAFDHFCIHAGGR 417

Query: 419 AVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFG 478
           AVIDELEKNLQLLP+HVEASRMTLHRFGNTSSSSIWYELAY EAKGRM +G+RVWQIAFG
Sbjct: 418 AVIDELEKNLQLLPIHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMHKGNRVWQIAFG 477

Query: 479 SGFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKLIS 515
           SGFKCNSAVW+AL+NV+PS  SPWEDCIDNYPVKL++
Sbjct: 478 SGFKCNSAVWEALRNVRPSQSSPWEDCIDNYPVKLVA 514

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255538658|ref|XP_002510394.1| acyltransferase, putative [Ricinus communis] gi|223551095|gb|EEF52581.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224132320|ref|XP_002321310.1| predicted protein [Populus trichocarpa] gi|222862083|gb|EEE99625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15223556|ref|NP_173376.1| 3-ketoacyl-CoA synthase 4 [Arabidopsis thaliana] gi|75311386|sp|Q9LN49.1|KCS4_ARATH RecName: Full=3-ketoacyl-CoA synthase 4; Short=KCS-4; AltName: Full=Very long-chain fatty acid condensing enzyme 4; Short=VLCFA condensing enzyme 4 gi|8778420|gb|AAF79428.1|AC025808_10 F18O14.21 [Arabidopsis thaliana] gi|190610070|gb|ACE79746.1| At1g19440 [Arabidopsis thaliana] gi|332191731|gb|AEE29852.1| 3-ketoacyl-CoA synthase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|228480462|gb|ACQ41892.1| 3-ketoacyl-CoA synthase [Camellia oleifera] Back     alignment and taxonomy information
>gi|297844920|ref|XP_002890341.1| hypothetical protein ARALYDRAFT_472173 [Arabidopsis lyrata subsp. lyrata] gi|297336183|gb|EFH66600.1| hypothetical protein ARALYDRAFT_472173 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359475340|ref|XP_003631663.1| PREDICTED: 3-ketoacyl-CoA synthase 4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224077840|ref|XP_002305431.1| predicted protein [Populus trichocarpa] gi|222848395|gb|EEE85942.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105387|ref|XP_002313793.1| predicted protein [Populus trichocarpa] gi|222850201|gb|EEE87748.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357473285|ref|XP_003606927.1| 3-ketoacyl-CoA synthase [Medicago truncatula] gi|355507982|gb|AES89124.1| 3-ketoacyl-CoA synthase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query515
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.996 0.994 0.824 2.7e-235
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.968 0.974 0.770 8.4e-216
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.912 0.965 0.716 2.1e-187
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.949 0.960 0.673 6e-183
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.943 0.918 0.647 2.7e-171
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.943 0.920 0.637 2.4e-170
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.939 0.973 0.619 6.4e-170
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.939 0.983 0.611 1.8e-165
TAIR|locus:2139599506 KCS18 "3-ketoacyl-CoA synthase 0.933 0.950 0.628 9e-164
TAIR|locus:2057706550 KCS10 "3-ketoacyl-CoA synthase 0.743 0.696 0.558 5.2e-162
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2269 (803.8 bits), Expect = 2.7e-235, P = 2.7e-235
 Identities = 424/514 (82%), Positives = 474/514 (92%)

Query:     1 MEQSGPTYDSGSGGG-APVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPL 59
             M+ +G +   G GGG   VGV+I+  R LPDFLQSVNLKYVKLGYHYLISNLLTLC  PL
Sbjct:     1 MDGAGESRLGGDGGGDGSVGVQIRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFPL 60

Query:    60 IIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCY 119
              ++ S++ S+MN DDL+QLWIHLQ+NLVS++ICSAILVFGLTV++MTRPRPVYLVD+SCY
Sbjct:    61 AVVISVEASQMNPDDLKQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCY 120

Query:   120 KPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMA 179
              PP +LKA Y +FMEHS+LTGDFD+S+LEFQRKILERSGLGE+TY PEAMH +PP+ SMA
Sbjct:   121 LPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRISMA 180

Query:   180 AAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRS 239
             AAREEAEQVM+GALDNLF+NTNV PKDIGILVVNCSLFNPTPSLSAMIVNKY+LRGNIRS
Sbjct:   181 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS 240

Query:   240 YNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG 299
             YNLGGMGCSAGVIAVDLAKD+L V+ NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG
Sbjct:   241 YNLGGMGCSAGVIAVDLAKDMLLVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG 300

Query:   300 CSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIA 359
              SAVLLSNK +D+R++KYRLVH+VRTH+GADDKAFRCVYQEQDD G+TGVSLSK+LMAIA
Sbjct:   301 GSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIA 360

Query:   360 GGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRA 419
             G  LKTNITTLGP+VLP+SEQ+LFF TLV+KKLFN  VKPYIPDFKLAF+HFCIHAGGRA
Sbjct:   361 GETLKTNITTLGPLVLPISEQILFFMTLVVKKLFNGKVKPYIPDFKLAFEHFCIHAGGRA 420

Query:   420 VIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGS 479
             VIDELEKNLQL PVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRM RG+RVWQIAFGS
Sbjct:   421 VIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGS 480

Query:   480 GFKCNSAVWQALQNVKPSHHSPWEDCIDNYPVKL 513
             GFKCNSA+W+AL++VKPS++SPWEDCID YPV L
Sbjct:   481 GFKCNSAIWEALRHVKPSNNSPWEDCIDKYPVTL 514
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA;IDA
GO:0042335 "cuticle development" evidence=RCA;IDA
GO:0009409 "response to cold" evidence=RCA
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139599 KCS18 "3-ketoacyl-CoA synthase 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057706 KCS10 "3-ketoacyl-CoA synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIX1KCS9_ARATH2, ., 3, ., 1, ., -0.77040.96890.9746nono
Q9LN49KCS4_ARATH2, ., 3, ., 1, ., -0.84170.95720.9554yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.976
3rd Layer2.3.1.1190.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query515
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 0.0
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 0.0
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 0.0
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 0.0
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 0.0
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 0.0
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-140
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 8e-22
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 6e-15
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 4e-12
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 4e-11
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 5e-10
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 2e-09
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 6e-08
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 7e-08
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 4e-06
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 1e-05
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 1e-05
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 1e-05
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 2e-05
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 5e-04
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 0.002
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  978 bits (2530), Expect = 0.0
 Identities = 431/495 (87%), Positives = 473/495 (95%)

Query: 20  VRIQHNRRLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLW 79
           +RI   R LPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIII SI+ S+MN DDLRQLW
Sbjct: 7   IRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLW 66

Query: 80  IHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLT 139
           IHLQ+NLVS++ICSA LVFGLTV+IMTRPRPVYLVDYSCY+ P +LKA + +FMEHS+LT
Sbjct: 67  IHLQYNLVSIIICSAFLVFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLT 126

Query: 140 GDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSN 199
           GDFD+SSLEFQRKILERSGLGE+TY PEAMH IPP+PSMAAAREEAEQVM+GALDNLF+N
Sbjct: 127 GDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQVMFGALDNLFAN 186

Query: 200 TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKD 259
           TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKY+LRGNIRS+NLGGMGCSAGVIAVDLAKD
Sbjct: 187 TNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKD 246

Query: 260 LLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRL 319
           +LQV+ NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVG SAVLLSNK +D+R++KY+L
Sbjct: 247 MLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKL 306

Query: 320 VHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSE 379
           VH+VRTH+GADDKAFRCVYQEQDD GKTGVSLSK+LMAIAG ALKTNITTLGP+VLP+SE
Sbjct: 307 VHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISE 366

Query: 380 QLLFFATLVIKKLFNRNVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASR 439
           QLLFFATLV+KKLFN+ +KPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASR
Sbjct: 367 QLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASR 426

Query: 440 MTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQALQNVKPSHH 499
           MTLHRFGNTSSSSIWYELAYIEAKGRM +G+RVWQIAFGSGFKCNSAVW+AL++VKPS++
Sbjct: 427 MTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNN 486

Query: 500 SPWEDCIDNYPVKLI 514
           SPWEDCID YPVKL+
Sbjct: 487 SPWEDCIDKYPVKLV 501

Length = 502
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 515
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 100.0
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 99.98
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.95
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.92
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.81
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.79
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.78
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.72
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.7
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.68
PRK08304337 stage V sporulation protein AD; Validated 99.57
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.51
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.5
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.42
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.41
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.41
PRK09051394 beta-ketothiolase; Provisional 99.4
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.38
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.36
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.35
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.33
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.31
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.31
PRK05790393 putative acyltransferase; Provisional 99.27
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.26
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.25
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.25
PRK12404334 stage V sporulation protein AD; Provisional 99.25
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.25
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.25
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.23
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.2
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.19
PRK06158384 thiolase; Provisional 99.16
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.16
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.15
PLN02287452 3-ketoacyl-CoA thiolase 99.13
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.11
PRK08256391 lipid-transfer protein; Provisional 99.1
PLN02644394 acetyl-CoA C-acetyltransferase 99.09
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.07
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.07
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.05
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.04
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.04
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.02
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.99
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.98
PRK06059399 lipid-transfer protein; Provisional 98.96
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.95
PRK07801382 acetyl-CoA acetyltransferase; Provisional 98.92
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 98.91
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.88
PRK06065392 acetyl-CoA acetyltransferase; Provisional 98.85
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.85
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 98.83
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.82
PRK08257 498 acetyl-CoA acetyltransferase; Validated 98.8
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 98.79
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.79
cd00832399 CLF Chain-length factor (CLF) is a factor required 98.79
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 98.79
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.78
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 98.71
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 98.7
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.7
PRK07516389 acetyl-CoA acetyltransferase; Provisional 98.7
PRK07851406 acetyl-CoA acetyltransferase; Provisional 98.69
PRK06289403 acetyl-CoA acetyltransferase; Provisional 98.67
PRK07850387 acetyl-CoA acetyltransferase; Provisional 98.65
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 98.64
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.63
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.6
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 98.6
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.59
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 98.58
PRK06504390 acetyl-CoA acetyltransferase; Provisional 98.54
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.53
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 98.51
PRK06066385 acetyl-CoA acetyltransferase; Provisional 98.5
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.49
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.49
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.48
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.47
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.43
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.39
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.36
PRK07937352 lipid-transfer protein; Provisional 98.28
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.28
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.12
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.04
PRK07855386 lipid-transfer protein; Provisional 97.97
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 97.96
COG3321 1061 Polyketide synthase modules and related proteins [ 97.59
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.55
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.32
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 97.03
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 96.92
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 95.6
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 94.51
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 94.51
PRK06025417 acetyl-CoA acetyltransferase; Provisional 94.25
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.64
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 93.49
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 93.03
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.97
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 92.91
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.25
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 91.97
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.94
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 91.89
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 91.74
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.71
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 90.8
PRK04262347 hypothetical protein; Provisional 90.78
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 90.45
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 90.44
PRK06840339 hypothetical protein; Validated 90.21
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 90.1
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 90.03
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 89.39
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.0
PRK06504390 acetyl-CoA acetyltransferase; Provisional 88.92
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 88.9
PRK08242402 acetyl-CoA acetyltransferase; Validated 88.3
PRK07851406 acetyl-CoA acetyltransferase; Provisional 87.57
PRK09052399 acetyl-CoA acetyltransferase; Provisional 87.31
PRK08235393 acetyl-CoA acetyltransferase; Provisional 87.06
PRK07850387 acetyl-CoA acetyltransferase; Provisional 86.61
PRK09051394 beta-ketothiolase; Provisional 86.57
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 86.38
PRK07108392 acetyl-CoA acetyltransferase; Provisional 86.09
PRK06690361 acetyl-CoA acetyltransferase; Provisional 85.22
PRK05656393 acetyl-CoA acetyltransferase; Provisional 85.04
PRK06205404 acetyl-CoA acetyltransferase; Provisional 84.91
PLN02287452 3-ketoacyl-CoA thiolase 84.9
PRK07661391 acetyl-CoA acetyltransferase; Provisional 84.55
PRK06445394 acetyl-CoA acetyltransferase; Provisional 84.18
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 83.88
PRK06366388 acetyl-CoA acetyltransferase; Provisional 83.56
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 83.53
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 83.24
PRK06954397 acetyl-CoA acetyltransferase; Provisional 83.18
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 83.16
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 83.01
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 82.26
PLN03169391 chalcone synthase family protein; Provisional 80.32
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-119  Score=964.86  Aligned_cols=512  Identities=61%  Similarity=1.046  Sum_probs=485.7

Q ss_pred             CCCCCCCCCCCCCCCCCccccccccCCCCCccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHhhccChHHHHH
Q 010193            1 MEQSGPTYDSGSGGGAPVGVRIQHNRRLPDFLQSVNLKYVKLGYHYLISNL---LTLCFIPLIIITSIQVSEMNIDDLRQ   77 (515)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (515)
                      |+++++++|+.+.+  ...+.+++|++||||++|+|+||||+||||+++|+   ++++++|++++++.++.+++++|++.
T Consensus         1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (521)
T PLN02854          1 MDKERLTAEMAFKD--SSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSE   78 (521)
T ss_pred             CchhhhhHHHhccC--CcceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            78899999998644  23677899999999999999999999999999999   66788999888899999999999988


Q ss_pred             HHHH--hhhhhHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHH
Q 010193           78 LWIH--LQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILE  155 (515)
Q Consensus        78 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~  155 (515)
                      +|..  +++++++++++++++++++++|+|+||++|||+||+||+|+++++++.+.++|+....|.|++++++||+||++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~  158 (521)
T PLN02854         79 LWSNQALHLDTATRLTGSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRIST  158 (521)
T ss_pred             HHHHhhhHHhHHHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            9987  78889999999899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCceeecCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCC
Q 010193          156 RSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRG  235 (515)
Q Consensus       156 ~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~  235 (515)
                      |||+|++||+|+..++.|++.+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++|+++++|+++||+++
T Consensus       159 ~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~  238 (521)
T PLN02854        159 RSGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRT  238 (521)
T ss_pred             hcCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccc
Q 010193          236 NIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQA  315 (515)
Q Consensus       236 ~~~~~dl~g~gCsggl~al~lA~~lL~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~  315 (515)
                      ++.+|||+||||+||++||++|+++++++++++||||++|++|.+||.++||++++++++|||||||+||++++.+++++
T Consensus       239 ~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~  318 (521)
T PLN02854        239 DIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRS  318 (521)
T ss_pred             CceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEeccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999976554567


Q ss_pred             cceeeeEEEEEeccCcccccceeeccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh
Q 010193          316 KYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR  395 (515)
Q Consensus       316 ~~~L~~~v~t~~~~d~~~~~~~~~~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~  395 (515)
                      +|+|.+++++++++|++.|+|+++++|+.|..|+++++++|.+++++++.|++++||.|+|++|+++|+...+.+.+.+.
T Consensus       319 k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~  398 (521)
T PLN02854        319 KYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKA  398 (521)
T ss_pred             chheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHc
Confidence            89999999999999999999999999888888999999999999999999999999999999999998888777777777


Q ss_pred             hccCcccCcccccCEEEeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEE
Q 010193          396 NVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQI  475 (515)
Q Consensus       396 ~~~~~~p~~~~did~~~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~Vlli  475 (515)
                      ++++|+|+|++||||||+||+|+++++.++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+
T Consensus       399 gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~i  478 (521)
T PLN02854        399 KVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQI  478 (521)
T ss_pred             CCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEE
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEChhHhhhheeeEeeccCCCC--CCCCcccccccCCCCCC
Q 010193          476 AFGSGFKCNSAVWQALQNVKPS--HHSPWEDCIDNYPVKLI  514 (515)
Q Consensus       476 afGsG~~~~sav~r~~~~~~~~--~~~~w~~~~~~~p~~~~  514 (515)
                      |||+||+||+++|||++++++.  .+|||+||||+|||++|
T Consensus       479 aFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~~  519 (521)
T PLN02854        479 AFGSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKVP  519 (521)
T ss_pred             EEchhhhhhheeeEEeccCCccccCCCCchhhHhhCCCCCC
Confidence            9999999999999999999865  67999999999999986

>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query515
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 6e-09
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 9e-09
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 2e-08
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 3e-08
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 3e-07
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 4e-07
2p0u_A413 Crystal Structure Of Marchantia Polymorpha Stilbene 3e-06
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 4e-06
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 4e-06
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 4e-06
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 4e-06
1i88_A389 Chalcone Synthase (G256v) Length = 389 5e-06
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 5e-06
1i89_A389 Chalcone Synthase (G256l) Length = 389 5e-06
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 6e-06
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 7e-06
1i8b_A389 Chalcone Synthase (g256f) Length = 389 8e-06
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 1e-05
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 2e-05
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 4e-05
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 5e-05
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 7e-05
3a5s_A387 Benzalacetone Synthase (I207lL208F) Length = 387 8e-05
2d51_A406 Pentaketide Chromone Synthase (M207g Mutant) Length 1e-04
2d3m_A406 Pentaketide Chromone Synthase Complexed With Coenzy 1e-04
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 1e-04
1xes_A413 Crystal Structure Of Stilbene Synthase From Pinus S 2e-04
1u0u_A397 An Aldol Switch Discovered In Stilbene Synthases Me 2e-04
1m1m_A355 X-Ray Crystal Structure Of Mycobacterium Tuberculos 4e-04
1hzp_A335 Crystal Structure Of The Myobacterium Tuberculosis 5e-04
3a5q_A387 Benzalacetone Synthase From Rheum Palmatum Length = 7e-04
3gwa_A365 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-C 7e-04
2ahb_A356 X-Ray Crystal Structure Of R46a,R161a Mutant Of Myc 8e-04
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure 
Iteration: 1

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/326 (20%), Positives = 125/326 (38%), Gaps = 73/326 (22%)
Query: 184 EAEQVMYGALDNLFSNTNVNPKDIGILV-VNCSLFNPTPSLSAMIVNKYRLRGNIRSYNL 242
           EA+  +   +     +  +   DI +++ V+C+ F   PSL+A ++N+       R   +
Sbjct: 83  EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM-MPSLTAWLINEMGFDSTTRQIPI 141
Query: 243 GGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGN-KKSMLIPNCLFRVGCS 301
             +GC+AG  A++ A D         A++V+ E  +  +   +     L+ N LF  G +
Sbjct: 142 AQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIA 201
Query: 302 AVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTGVSLSKELMAIAGG 361
           A ++  +                                    G TGV L +        
Sbjct: 202 AAVVRGR------------------------------------GGTGVRLERN------- 218
Query: 362 ALKTNITTLGPVVLPVSEQLLFFAT------LVIKKLFNRNVKPYIPDFK-LAFDH---- 410
                    G  ++P +E  + +         ++ K     ++P  P  K LA +H    
Sbjct: 219 ---------GSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAPALKELAGEHGWDA 269
Query: 411 -----FCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGR 465
                + +HAGG  ++D+L   L++ P     SR TL  +GN +S+ +   L  +  +G 
Sbjct: 270 SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGG 329
Query: 466 MCRGHRVWQIAFGSGFKCNSAV--WQ 489
           +  G R     FG G     ++  WQ
Sbjct: 330 VEEGARGLLAGFGPGITAEMSLGCWQ 355
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 Back     alignment and structure
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 Back     alignment and structure
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 Back     alignment and structure
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 Back     alignment and structure
>pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii (Mtfabh) Length = 355 Back     alignment and structure
>pdb|1HZP|A Chain A, Crystal Structure Of The Myobacterium Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii Length = 335 Back     alignment and structure
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 Back     alignment and structure
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii Length = 365 Back     alignment and structure
>pdb|2AHB|A Chain A, X-Ray Crystal Structure Of R46a,R161a Mutant Of Mycobacterium Tuberculosis Fabh Length = 356 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query515
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-116
3oit_A387 OS07G0271500 protein; type III polyketide synthase 1e-106
3awk_A402 Chalcone synthase-like polyketide synthase; type I 4e-81
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 2e-74
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 2e-73
3v7i_A413 Putative polyketide synthase; type III polyketide 7e-73
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 3e-63
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 2e-61
1xes_A413 Dihydropinosylvin synthase; native structure, tran 5e-61
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 5e-53
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 9e-51
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 7e-48
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 1e-35
1u0m_A382 Putative polyketide synthase; type III polyketide 2e-35
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 2e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 2e-07
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 5e-07
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 6e-06
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 2e-05
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 3e-05
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 4e-05
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 5e-05
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 9e-05
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 1e-04
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 3e-04
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 1e-04
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 1e-04
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 1e-04
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 1e-04
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 2e-04
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 2e-04
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 2e-04
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 3e-04
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 4e-04
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  346 bits (889), Expect = e-116
 Identities = 58/394 (14%), Positives = 132/394 (33%), Gaps = 39/394 (9%)

Query: 107 RPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSG-----LGE 161
                +++      P      S     +           + E  ++I E+S      L  
Sbjct: 10  SNNNSFVLGIGISVPGE--PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVR 67

Query: 162 ETYFPEAMHAIPPKPS----MAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLF 217
           +   PE         +        ++    +   A      +   +  DI  +V   S  
Sbjct: 68  DYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG 127

Query: 218 NPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENI 277
              P ++  +++   L  ++   +L  MGC AG+ ++  A  L + +     +VV TE  
Sbjct: 128 IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC 187

Query: 278 TQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCV 337
           + ++   +    ++ + +F  G +A ++    +      Y ++  +       + A   V
Sbjct: 188 SLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENA--MV 245

Query: 338 YQEQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNV 397
           +  + +     + L   +  + G  ++  + TL                   K     + 
Sbjct: 246 WDLEKEGWN--LGLDASIPIVIGSGIEAFVDTLLD-----------------KAKLQTST 286

Query: 398 KPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYEL 457
                D       F IH GG++++  +E +L + P   + +    H +GN SS+S+ + +
Sbjct: 287 AISAKDC-----EFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVM 341

Query: 458 AYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQAL 491
            +               +AFG G        + +
Sbjct: 342 DHARKSKS--LPTYSISLAFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query515
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.86
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.75
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.74
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.73
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.7
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.69
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.68
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.67
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.66
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.66
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.63
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.63
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.63
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.59
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.59
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.59
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.59
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.58
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.58
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.57
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.56
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.56
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.53
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.53
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.53
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.53
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.52
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.51
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.5
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.5
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.46
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.4
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.34
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.31
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.01
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.66
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.21
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 97.77
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.23
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 97.07
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 94.03
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 93.95
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 93.49
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 93.32
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 93.01
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 92.85
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 92.58
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 92.2
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 92.03
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 91.93
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 91.91
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 91.86
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 91.77
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 91.68
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 91.49
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 90.57
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 90.08
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 89.37
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 88.91
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 88.89
1u0m_A382 Putative polyketide synthase; type III polyketide 88.54
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 87.9
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 87.72
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 85.9
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 85.4
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 84.91
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 82.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 81.73
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 80.72
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 80.67
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 80.11
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=7.1e-56  Score=458.73  Aligned_cols=328  Identities=19%  Similarity=0.264  Sum_probs=257.2

Q ss_pred             hCCCCeEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCccCCCCCCcHHHHHHHH
Q 010193          106 TRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEA  185 (515)
Q Consensus       106 ~r~~~v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea  185 (515)
                      .||...+|+++|.|+|+  ++|+|+|+.+.++.    +++      ||.+|+||++|+++.+++.              +
T Consensus         9 ~~~~~srI~g~g~ylP~--~~v~n~el~~~~~~----~~e------~I~~rtGI~~R~~a~~~e~--------------~   62 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPA--NLVPNEDLIGPIDS----SDE------WIRQRTGIVTRQRATAEET--------------V   62 (350)
T ss_dssp             CCCSEEEEEEEEEECCS--CEEEHHHHTTTTTC----CHH------HHHHHHCCSEEECCCSSCC--------------H
T ss_pred             cCCCCCEEEEEEEEcCC--CeEcHHHHHHHhCC----CHH------HHHhccCceEEEEcCCCCC--------------H
Confidence            37778899999999999  89999999877653    555      7999999999999988764              7


Q ss_pred             HHHHHHHHHHHHHhCCCCcCCcCEEEEee-cCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcC
Q 010193          186 EQVMYGALDNLFSNTNVNPKDIGILVVNC-SLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVN  264 (515)
Q Consensus       186 ~~la~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~sg  264 (515)
                      .+|+.+|+++||+++|++|+|||+||++| +++++.|+++++|+++||++ ++.+||++ +||+|++.||++|.++++++
T Consensus        63 ~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g  140 (350)
T 4ewp_A           63 PVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSG  140 (350)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCC
Confidence            89999999999999999999999999996 56899999999999999998 67799999 69999999999999999999


Q ss_pred             CCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCcccccccceeeeEEEEEeccCcccccceeeccCCC
Q 010193          265 WNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQ  344 (515)
Q Consensus       265 ~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~~~~~ed~~  344 (515)
                      +.++||||++|.+|. +.++.+|.   +..+|||||+|++|++.+...         +....+++|++.++.+..+... 
T Consensus       141 ~~~~~Lvv~~E~~s~-~~d~~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~-  206 (350)
T 4ewp_A          141 TARHVLVVGVERLSD-VVDPTDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ-  206 (350)
T ss_dssp             SCSEEEEEEEEEGGG-GCCTTCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH-
T ss_pred             CccceeEeeeeecee-cccccccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc-
Confidence            999999999999997 55667777   578999999999999866431         1223456787777766654321 


Q ss_pred             CCcccccchhHHHHhhh---------cccccccccCCcccchhhhHHHHHHHH---HHHHHhh-hccCcccCcccccCEE
Q 010193          345 GKTGVSLSKELMAIAGG---------ALKTNITTLGPVVLPVSEQLLFFATLV---IKKLFNR-NVKPYIPDFKLAFDHF  411 (515)
Q Consensus       345 g~~g~~ls~dl~~v~g~---------~l~~ni~~lgp~vlp~se~~~~~~~~~---~~~v~~~-~~~~~~p~~~~did~~  411 (515)
                        ....-..+.....++         ....++...|+.|      +.+....+   .+++++. .++      .+|||||
T Consensus       207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~a~~~~~~~i~~~L~~~gl~------~~did~~  272 (350)
T 4ewp_A          207 --LELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSV------FRWAVWSMAKVAREALDAAGVE------PEDLAAF  272 (350)
T ss_dssp             --HHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHH------HHHHHHTHHHHHHHHHHHHTCC------GGGEEEE
T ss_pred             --cccCcccccccccCCccccccccccccceeEehhHHH------HHHHHHhhhHHHHHHHHhhcCC------hhHhceE
Confidence              000000000111110         0011122222211      11111111   1233322 222      4899999


Q ss_pred             EeccCCHHHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEEChhHhhhheeeEee
Q 010193          412 CIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRGHRVWQIAFGSGFKCNSAVWQAL  491 (515)
Q Consensus       412 ~~H~~g~~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~GD~VlliafGsG~~~~sav~r~~  491 (515)
                      ++||+|+++++.+++.||++++++.  .+++++||||||||+|+.|++++++|++++||+|+++|||+||+|+++||||.
T Consensus       273 v~Hq~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~P  350 (350)
T 4ewp_A          273 IPHQANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRLP  350 (350)
T ss_dssp             EECCSCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEECC
T ss_pred             EecCCCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEeC
Confidence            9999999999999999999999985  36899999999999999999999999999999999999999999999999984
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 515
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 5e-47
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 3e-30
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 4e-20
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 6e-20
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 2e-19
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 9e-18
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 1e-17
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 9e-11
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 2e-10
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 2e-10
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 8e-09
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  165 bits (419), Expect = 5e-47
 Identities = 67/385 (17%), Positives = 133/385 (34%), Gaps = 44/385 (11%)

Query: 119 YKPPHNLK-ASYDKFMEHSKLTGDFDESSLEFQRKILERSG-------LGEETYFPEAMH 170
             P   +  +     +         D    E   ++ ++S        +       +   
Sbjct: 20  GTPRRVVNQSDAADRVAEL----FLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFR 75

Query: 171 AIPP--KPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIV 228
             P   +  M    E A  +         +       +IG+LV+  S     P +   IV
Sbjct: 76  REPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIV 135

Query: 229 NKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLLQVNWNTYAVVVSTENITQNWYFGNKKS 288
            +  L  +I    +  MGC+A + A+  A + ++ +    A+VV  E  + N  F +  +
Sbjct: 136 KELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDIN 195

Query: 289 MLIPNCLFRVGCSAVLLSNKRKDRRQAKYRLVHIVRTHKGADDKAFRCVYQEQDDQGKTG 348
            ++ + LF  GC+A+++   +   +    ++V              R  + +  D  + G
Sbjct: 196 DVVIHSLFGDGCAALVIGASQVQEKLEPGKVVV-------------RSSFSQLLDNTEDG 242

Query: 349 VSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNRNVKPYIPDFKLAF 408
           + L      I     +     +   V PV  ++L+   L I                   
Sbjct: 243 IVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISD----------------I 286

Query: 409 DHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCR 468
           D + IH GG  +I++  ++L +       S   L RFGN  S S+ + L  +  +    +
Sbjct: 287 DLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAK 346

Query: 469 GH-RVWQIAFGSGFKCNSAVWQALQ 492
                   AFG G      ++  ++
Sbjct: 347 AISTGVAFAFGPGVTVEGMLFDIIR 371
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query515
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 100.0
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 100.0
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 100.0
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.98
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.97
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.96
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.86
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.86
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.85
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.84
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.84
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.84
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.84
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.83
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 98.84
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.84
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.8
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.75
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.73
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 98.65
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.64
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.62
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.37
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.27
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.2
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.09
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 97.96
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.76
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.35
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 95.86
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 95.68
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 93.55
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 91.22
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 90.83
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 88.0
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 87.38
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 85.82
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 82.96
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.1e-52  Score=433.94  Aligned_cols=347  Identities=17%  Similarity=0.216  Sum_probs=261.6

Q ss_pred             eEEEEeeEecCCCCceecHHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceeecCCCcc-------CCCCC--CcHHHH
Q 010193          111 VYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMH-------AIPPK--PSMAAA  181 (515)
Q Consensus       111 v~Iv~~~~y~P~~~~~vs~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~-------~~~~~--~~~~~~  181 (515)
                      .+|.|+|+|+|+  ++|+|+|+.+.++.... +++..+++.+|++++||++||++.+...       ..++.  .++..+
T Consensus        12 a~I~g~g~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~~   88 (372)
T d1teda_          12 AVIEGLATGTPR--RVVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLF   88 (372)
T ss_dssp             EEEEEEEEECCS--CEEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHH
T ss_pred             EEEEEEEEeCCC--eEEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHHH
Confidence            689999999999  89999999998875332 3344556678999999999998754211       11121  245567


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeecCCCCCCChHHHHHHHcCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Q 010193          182 REEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLRGNIRSYNLGGMGCSAGVIAVDLAKDLL  261 (515)
Q Consensus       182 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL  261 (515)
                      .|++.+|+.+|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++..++++++||+|++.||++|.+++
T Consensus        89 ~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l  168 (372)
T d1teda_          89 YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV  168 (372)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999888899999999999999999889999998789999999999999999


Q ss_pred             hcCCCCeEEEEEeccCcCCccCCCCccccccccccccccEEEEEecCCccccc--ccceeeeEEEEEeccCcccccceee
Q 010193          262 QVNWNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSAVLLSNKRKDRRQ--AKYRLVHIVRTHKGADDKAFRCVYQ  339 (515)
Q Consensus       262 ~sg~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaA~LLs~~~~~~~~--~~~~L~~~v~t~~~~d~~~~~~~~~  339 (515)
                      ++++.++||||++|.+|.++...++....++.++|||||+|+||++++.....  ..+.+.... ++...+.  .+.+.+
T Consensus       169 ~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~  245 (372)
T d1teda_         169 RAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNT--EDGIVL  245 (372)
T ss_dssp             HHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTC--TTSEEE
T ss_pred             hcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEeccc-ccccCCC--cccccc
Confidence            99999999999999998765544444444467899999999999987653221  112121111 1111111  111111


Q ss_pred             ccCCCCCcccccchhHHHHhhhcccccccccCCcccchhhhHHHHHHHHHHHHHhh-hccCcccCcccccCEEEeccCCH
Q 010193          340 EQDDQGKTGVSLSKELMAIAGGALKTNITTLGPVVLPVSEQLLFFATLVIKKLFNR-NVKPYIPDFKLAFDHFCIHAGGR  418 (515)
Q Consensus       340 ~ed~~g~~g~~ls~dl~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~~~~H~~g~  418 (515)
                      ..++ +...+..+++++....+                      .+....+++++. .++      .+|||+|++||+|+
T Consensus       246 ~~~~-~~~~~~~~~~~~~~~~~----------------------~~~~~i~~~L~~~gl~------~~did~~i~Hq~~~  296 (372)
T d1teda_         246 GVNH-NGITCELSENLPGYIFS----------------------GVAPVVTEMLWDNGLQ------ISDIDLWAIHPGGP  296 (372)
T ss_dssp             EEET-TEEEEEECTTHHHHHHH----------------------HHHHHHHHHHHHTTCC------GGGCSCEEECCSCH
T ss_pred             CCCC-CcceeechHHHHHHHHH----------------------HHHHHHHHHHHhcCCC------HHHhhhhhccCccH
Confidence            1111 11112223333322211                      011112334432 232      48999999999999


Q ss_pred             HHHHHHHHHcCCCchhhhhhccccccccccccchHHHHHHHHHHcCCCCCC-CEEEEEEEChhHhhhheeeEeec
Q 010193          419 AVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMCRG-HRVWQIAFGSGFKCNSAVWQALQ  492 (515)
Q Consensus       419 ~vl~~v~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G-D~VlliafGsG~~~~sav~r~~~  492 (515)
                      ++++.+++.||++++++..|+.++.+||||+|+|+|+.|++++++|++++| |++++++||+|++|++++|++++
T Consensus       297 ~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         297 KIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            999999999999999998888889999999999999999999999998776 89999999999999999999986
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure