Citrus Sinensis ID: 010411

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-

MEVRSENVQVRCDKLQAPGIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFFPNITNKVPWIPLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGYSPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS

ccccccccHHcccccccccccccccEEHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcccccEEEccccHHHHHHcccccccccccccccHHHHHHHcccccccccEEEEEEccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHccccccccHHHHHHHHHHHHcccccccccccHHHHHccccccccHHHHHHHHHHHccccccEEEEEEcEEccccccHHHHHHHcccHHHHcccccHHHHHHHHccccHHHHHHHHccccccEEEEcccccccHHHHHHHHHcccccEEcccHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccccccccccccccccccccccc

ccEccccccEHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHcccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHcccccHHHHHHEEHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEccccccccHHHHHHHHHHHHHcccccEEEccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcEcccccHHHHHHHHHccccccccccccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccccccHHccccccccccccccHHHHcc

MEVRSENVQVRCdklqapgiprtrLQVWFIRVCSSILLWTCLVQLVAVgelwhpkffpnitnkvpwiplvprhvdavvqsppplvpprnytsngflkVSCNGGLNQMRAAICDMVTVAQLLNLTLvvpeldktsfwadpsnfedifNVRHFIDSLRDEVRIVRRLpkkysrkygyspmemppvswsneKYYLQQILphfskhkvlhfnrtdtrlanngipfdlqklrcrvnfqglkftpkiETLGYELVRILQEKGPFVALHLRYEMDMLafsgcthgcsmgeAEELKRLRYAYPWWREKEIVseerrsqglcpltpEEAALVLQALgidkdthiYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVStasdifiptydgnmaKVVEGHRRYLGFKKSILLDRKILVGLLdmhhngtlsfNEFTVAVRLAHEkrmgqptrrrviadkpkeedyfyanpqecfcegtncadlpgygnlsgiqgakvsdlls

mevrsenvqvrcdklqapgiprtrlQVWFIRVCSSILLWTCLVQLVAVGELWHPKFFPNITNKVPWIPLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVrhfidslrdevrivrrlpkkysrkygyspmEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAhekrmgqptrrrviadkpkeEDYFYANPQECFCEGTNCADLPGYGnlsgiqgakvsdlls

**********RCDKLQAPGIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFFPNITNKVPWIPLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGYSPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHE******************EDYFYANPQECFCEGTNCADLPGYGNLSGI**********

*******************IPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWH****************************************GFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKK****Y*****EMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCT*****GEAEELKRLRYAYPWWREKE************PLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVR************************YFYANPQEC*****************************

**********RCDKLQAPGIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFFPNITNKVPWIPLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGYSPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS

*********VRCDKLQAPGIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFF****NKVPWIPLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGYSPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGT************************

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		511	2.2.26 [Sep-21-2011]
Q8W486		519	Uncharacterized protein A	no	no	0.749	0.737	0.391	2e-73

>sp\|Q8W486\|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1	Back alignment and function desciption

 Score =  276 bits (706), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/411 (39%), Positives = 230/411 (55%), Gaps = 28/411 (6%)

Query: 86  PPRNYTSNGFLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDI 145
           PP    +NG+L+V CNGGLNQ R+AIC+ V  A+++N TLV+PELD  SFW D S F+ I
Sbjct: 82  PPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGI 141

Query: 146 FNVRHFIDSLRDEVRIVRRLPK-------KYSRKYGYSPMEMPPVSWSNEKYYLQQILPH 198
           ++V HFI++L+ +V+IV ++P        K  + +   P    P+ W     YL   L  
Sbjct: 142 YDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQIRPPRDAPIEW-----YLTTALKA 196

Query: 199 FSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPF 258
             +H  ++      RLA      + Q+LRCRVN+  L+F P I  L   +V  L+ +G F
Sbjct: 197 MREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGHF 256

Query: 259 VALHLRYEMDMLAFSGCTHGCSMGEAEELKRLR-YAYPWWREKEIVSEERRSQGLCPLTP 317
           +++HLR+EMDMLAF+GC     +   EE K LR Y    + +K ++  ERR+ G CPLTP
Sbjct: 257 MSIHLRFEMDMLAFAGC---FDIFNPEEQKILRKYRKENFADKRLIYNERRAIGKCPLTP 313

Query: 318 EEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNH 377
           EE  L+L+A+  D  T IY+AAGE++GGE+ +   R  FPR+      +DP+E     + 
Sbjct: 314 EEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSS-VDPSEELSATSQ 372

Query: 378 SSQMAALDFMVSTASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHH 435
               +A+D+MV   SDIF+PTYDG  N A  + GHR Y GF+ +I  DRK L  +     
Sbjct: 373 GLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIARE 432

Query: 436 NGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANP-QECFCE 485
            G  +  E  V  R+  +   G P +R          + FY N   ECFC+
Sbjct: 433 KGKRAGFEEAVR-RVMLKTNFGGPHKR-------VSPESFYTNSWPECFCQ 475

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		511
255562950		520	conserved hypothetical protein [Ricinus	0.982	0.965	0.808	0.0
225462928		504	PREDICTED: DUF246 domain-containing prot	0.982	0.996	0.783	0.0
449434758		503	PREDICTED: DUF246 domain-containing prot	0.978	0.994	0.767	0.0
449478380		503	PREDICTED: LOW QUALITY PROTEIN: DUF246 d	0.978	0.994	0.767	0.0
356494810		506	PREDICTED: DUF246 domain-containing prot	0.984	0.994	0.754	0.0
356502569		506	PREDICTED: DUF246 domain-containing prot	0.984	0.994	0.747	0.0
356521659		499	PREDICTED: DUF246 domain-containing prot	0.972	0.995	0.763	0.0
224101395		493	predicted protein [Populus trichocarpa]	0.954	0.989	0.756	0.0
42562051		499	O-fucosyltransferase family protein [Ara	0.968	0.991	0.754	0.0
224108966		500	predicted protein [Populus trichocarpa]	0.947	0.968	0.765	0.0

>gi\|255562950\|ref\|XP_002522480.1\| conserved hypothetical protein [Ricinus communis] gi\|223538365\|gb\|EEF39972.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/506 (80%), Positives = 442/506 (87%), Gaps = 4/506 (0%)

Query: 1   MEVRSENVQVRCDKL-QAPGIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFFPN 59
           MEVRSE V VRCDK+  +  I RTRLQVWFIRVCSSILLWT LVQLVAVGELW P F   
Sbjct: 1   MEVRSEGVPVRCDKVTNSQVIARTRLQVWFIRVCSSILLWTGLVQLVAVGELWRPNFIST 60

Query: 60  ITNKVPWIP---LVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVT 116
            T+K+  I    L  +        PPPL+P RNYTSNGFLKVSCNGGLNQMRAAICDMV 
Sbjct: 61  FTHKISQITPFPLHLQLQPPPPPPPPPLLPARNYTSNGFLKVSCNGGLNQMRAAICDMVA 120

Query: 117 VAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGYS 176
           VA+LLNLTLVVPELDKTSFWADPSNFEDIF+V+HFIDSLRDEVRI+RR+PK+++RKYGY 
Sbjct: 121 VARLLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIIRRVPKRFNRKYGYK 180

Query: 177 PMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLK 236
             EMPPVSWSNEKYYLQQILP FSK KVLHFN+TD RLANNGIP DLQKLRCRVNFQ LK
Sbjct: 181 VFEMPPVSWSNEKYYLQQILPLFSKVKVLHFNKTDARLANNGIPVDLQKLRCRVNFQALK 240

Query: 237 FTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPW 296
           FT +IE+LGY+LVRILQE+GPFVALHLRYEMDMLAFSGCTHGC+  EAEELK+LRYAYPW
Sbjct: 241 FTSQIESLGYKLVRILQERGPFVALHLRYEMDMLAFSGCTHGCTKEEAEELKQLRYAYPW 300

Query: 297 WREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAF 356
           WREKEIVSEERRSQGLCPLTPEE AL+LQALG DK+T IYIAAGEIYG E RLAALRAAF
Sbjct: 301 WREKEIVSEERRSQGLCPLTPEETALILQALGFDKETQIYIAAGEIYGSESRLAALRAAF 360

Query: 357 PRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGF 416
           P IVRKEMLLDPAELQ FQNHSSQMAALDFMVS AS+ FIPTYDGNMAKVVEGHRRYLGF
Sbjct: 361 PLIVRKEMLLDPAELQQFQNHSSQMAALDFMVSIASNTFIPTYDGNMAKVVEGHRRYLGF 420

Query: 417 KKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFY 476
           KK+ILLDRK LV LLD+H NGTL++N+F VAV+ AHEKRMGQP+RR+VIADKPKEEDYFY
Sbjct: 421 KKTILLDRKKLVELLDLHQNGTLTWNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFY 480

Query: 477 ANPQECFCEGTNCADLPGYGNLSGIQ 502
           ANPQEC CEGTNC DL G  N S +Q
Sbjct: 481 ANPQECLCEGTNCDDLLGPNNSSSLQ 506

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225462928\|ref\|XP_002265858.1\| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] gi\|296087792\|emb\|CBI35048.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449434758\|ref\|XP_004135163.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449478380\|ref\|XP_004155302.1\| PREDICTED: LOW QUALITY PROTEIN: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356494810\|ref\|XP_003516276.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]	Back alignment and taxonomy information

>gi\|356502569\|ref\|XP_003520091.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]	Back alignment and taxonomy information

>gi\|356521659\|ref\|XP_003529471.1\| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]	Back alignment and taxonomy information

>gi\|224101395\|ref\|XP_002312261.1\| predicted protein [Populus trichocarpa] gi\|222852081\|gb\|EEE89628.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|42562051\|ref\|NP_172855.2\| O-fucosyltransferase family protein [Arabidopsis thaliana] gi\|37202038\|gb\|AAQ89634.1\| At1g14020 [Arabidopsis thaliana] gi\|110739513\|dbj\|BAF01665.1\| growth regulator like protein [Arabidopsis thaliana] gi\|110739824\|dbj\|BAF01818.1\| growth regulator like protein [Arabidopsis thaliana] gi\|332190978\|gb\|AEE29099.1\| O-fucosyltransferase family protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224108966\|ref\|XP_002315033.1\| predicted protein [Populus trichocarpa] gi\|222864073\|gb\|EEF01204.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		511
TAIR\|locus:2014869		499	AT1G14020 [Arabidopsis thalian	0.964	0.987	0.765	8e-211
TAIR\|locus:2056981		508	AT2G03280 [Arabidopsis thalian	0.679	0.683	0.769	3.5e-189
TAIR\|locus:2143181		508	AT5G15740 [Arabidopsis thalian	0.911	0.917	0.605	1.1e-156
TAIR\|locus:2076552		512	AT3G02250 [Arabidopsis thalian	0.917	0.916	0.605	3.8e-156
TAIR\|locus:2065563		638	AT2G37980 [Arabidopsis thalian	0.759	0.608	0.498	4.2e-102
TAIR\|locus:2080285		638	AT3G54100 [Arabidopsis thalian	0.769	0.615	0.491	4.4e-100
TAIR\|locus:2009467		565	AT1G22460 [Arabidopsis thalian	0.825	0.746	0.454	8.4e-97
TAIR\|locus:2157096		652	AT5G35570 [Arabidopsis thalian	0.765	0.599	0.469	8.4e-97
TAIR\|locus:2150129		631	FRB1 "FRIABLE 1" [Arabidopsis	0.763	0.618	0.462	2.7e-93
TAIR\|locus:2174754		522	AT5G64600 [Arabidopsis thalian	0.761	0.745	0.460	1.3e-92

TAIR\|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2038 (722.5 bits), Expect = 8.0e-211, P = 8.0e-211
 Identities = 386/504 (76%), Positives = 436/504 (86%)

Query:     1 MEVRSE-NV-QVRCDKLQAP-GIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPKFF 57
             MEVRSE N+ Q R DKL  P  +P+ R+QVWF+RVCSSIL+WTCLVQL A GELWH + F
Sbjct:     1 MEVRSESNITQARSDKLPLPPAVPKPRVQVWFVRVCSSILVWTCLVQLFAAGELWHSRIF 60

Query:    58 PNITNKVPWI--PLVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMV 115
               +TN++     P+ P      V  PPPL PPRNYTSNG L VSCNGGLNQMR+AICDMV
Sbjct:    61 TGLTNQISRFSAPVEP------VPLPPPLPPPRNYTSNGILLVSCNGGLNQMRSAICDMV 114

Query:   116 TVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKYGY 175
             TVA+LLNLTLVVPELDKTSFWADPS FEDIF+VRHFIDSLRDEVRI+RRLPK++SRKYGY
Sbjct:   115 TVARLLNLTLVVPELDKTSFWADPSGFEDIFDVRHFIDSLRDEVRILRRLPKRFSRKYGY 174

Query:   176 SPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGL 235
                EMPPVSWS+EKYYL+Q+LP FSKHKV+HFNRTDTRLANNG+P  LQ LRCRVNFQGL
Sbjct:   175 QMFEMPPVSWSDEKYYLKQVLPLFSKHKVVHFNRTDTRLANNGLPLSLQWLRCRVNFQGL 234

Query:   236 KFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYP 295
             KFTP++E LG +LVRILQ++GPFVALHLRYEMDMLAFSGCTHGC+  EAEELK++RY YP
Sbjct:   235 KFTPQLEALGSKLVRILQQRGPFVALHLRYEMDMLAFSGCTHGCTEEEAEELKKMRYTYP 294

Query:   296 WWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAA 355
             WWREKEIVSEERR+QGLCPLTPEE ALVL+ALG +K+T IYIAAGEIYG E RL+ LR A
Sbjct:   295 WWREKEIVSEERRAQGLCPLTPEEVALVLKALGFEKNTQIYIAAGEIYGSEHRLSVLREA 354

Query:   356 FPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLG 415
             FPRIV+KEMLL+ AELQ FQNHSSQMAALDFMVS AS+ FIPTYDGNMAKVVEGHRRYLG
Sbjct:   355 FPRIVKKEMLLESAELQQFQNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLG 414

Query:   416 FKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYF 475
             +KK+ILLDRK LV LLD+HHN TL++++F VAV+ AHE+R G PT RRVI+DKPKEEDYF
Sbjct:   415 YKKTILLDRKRLVELLDLHHNKTLTWDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYF 474

Query:   476 YANPQECFCEGTNCADLPGYGNLS 499
             YANPQEC CEGTNC DL G+ NL+
Sbjct:   475 YANPQECLCEGTNCHDLFGHRNLT 498

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR\|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		511
cd11299		290	cd11299, O-FucT_plant, GDP-fucose protein O-fucosy	1e-157
pfam10250		315	pfam10250, O-FucT, GDP-fucose protein O-fucosyltra	1e-122
cd11296		206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	3e-10

>gnl\|CDD\|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily	Back alignment and domain information

 Score =  449 bits (1157), Expect = e-157
 Identities = 163/326 (50%), Positives = 209/326 (64%), Gaps = 37/326 (11%)

Query: 95  FLKVSCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSNFEDIFNVRHFIDS 154
           +L VS NGGLNQ R+ ICD V VA+LLN TLV+PELDK S W D S F DI++V HFI S
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 155 LRDEVRIVRRLPKKYSRKYGYSPMEMPPVSWSNEKYYLQQILPHFSKHKVLHFNRTDTRL 214
           L+D+VR+V++LP++ + K           S S+  YYL+++LP   KH V+     D+RL
Sbjct: 61  LKDDVRVVKKLPEELASKKPEIT-VKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRL 119

Query: 215 ANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEK-GPFVALHLRYEMDMLAFS 273
           AN+ +P ++Q+LRCRVNF  L+F P+IE LG +LV  L+E  GPF+ALHLR+E DMLAFS
Sbjct: 120 ANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFS 179

Query: 274 GCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDT 333
           GC                                   G CPLTPEE  L+L+ALG  + T
Sbjct: 180 GC-----------------------------------GKCPLTPEEVGLLLRALGFPRST 204

Query: 334 HIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASD 393
            IY+AAGEIYGGE+RL  LR+ FP +  KE L    EL  F  HSS++AALD++V   SD
Sbjct: 205 RIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESD 264

Query: 394 IFIPTYDGNMAKVVEGHRRYLGFKKS 419
           +F+PTY GN AK V GHRRYLG +K+
Sbjct: 265 VFVPTYGGNFAKAVAGHRRYLGHRKT 290

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl\|CDD\|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase	Back alignment and domain information

>gnl\|CDD\|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		511
PF10250		351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	100.0
KOG3849		386	consensus GDP-fucose protein O-fucosyltransferase	98.13
PF05830		321	NodZ: Nodulation protein Z (NodZ); InterPro: IPR00	97.25

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats	Back alignment and domain information

Probab=100.00  E-value=9.5e-57  Score=451.08  Aligned_cols=300  Identities=37%  Similarity=0.667  Sum_probs=209.8

Q ss_pred             EecCcchhhHHHHHHHHHHHHHhcCceeecccCCCcccCCCCC-----CCccccHHHHHHhccccceEeccCchhhhhhc
Q 010411           99 SCNGGLNQMRAAICDMVTVAQLLNLTLVVPELDKTSFWADPSN-----FEDIFNVRHFIDSLRDEVRIVRRLPKKYSRKY  173 (511)
Q Consensus        99 ~~nGGLNqqR~~IcDaV~vAr~LNATLViP~L~~~s~W~D~S~-----F~dIFDvdhFI~sL~~dVrIvk~LP~~~~~~~  173 (511)
                      .|.||+||||+++++||++|++||+|||||.+...+.|++.++     |+++||++||++.++++|++.+.+|..+....
T Consensus         5 p~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~   84 (351)
T PF10250_consen    5 PCMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVF   84 (351)
T ss_dssp             --SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhcccc
Confidence            3889999999999999999999999999999999999999987     99999999999999999999988886554321


Q ss_pred             CC----------------------------CCCccCCCC-cCChHHHHhhcccccccc------ceEEEeccCcccccCC
Q 010411          174 GY----------------------------SPMEMPPVS-WSNEKYYLQQILPHFSKH------KVLHFNRTDTRLANNG  218 (511)
Q Consensus       174 ~~----------------------------~~~~~~p~~-ws~~~yY~~~ilP~l~k~------~Vi~l~~~d~RLa~d~  218 (511)
                      ..                            ...+..+.. |+.+.+|+++++|.+.++      +++.|.++..++..+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  164 (351)
T PF10250_consen   85 RLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNY  164 (351)
T ss_dssp             -EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--G
T ss_pred             chhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcc
Confidence            10                            011222223 788889999999999886      9999999999999988


Q ss_pred             CCchhhhhhhhhcccccccchHHHHHHHHHHHHHh-hcCCeEEEecccchhhhhhhccCCCCChhHHHHHHHHHhcCccc
Q 010411          219 IPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQ-EKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWW  297 (511)
Q Consensus       219 lp~eiQrLRCrvnf~ALrF~~~I~~Lg~~lV~RLr-~~G~fiAlHLR~E~DMLAfsgC~~g~~~~E~~eL~~~R~~~~~w  297 (511)
                      .+.++||        +|+|+++|+++|++++++|. ..++|||+|||+|+||  +++|.+++   +...|+.+|.    +
T Consensus       165 ~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~----~  227 (351)
T PF10250_consen  165 LDRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRC----W  227 (351)
T ss_dssp             GGGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHH----H
T ss_pred             cCccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHh----h
Confidence            8999987        99999999999999999999 7899999999999999  89999955   6667777775    3


Q ss_pred             cccccChHHHhcCCCCCCCHHHHHHHHHHcCCCCCceEEEEeccccCCccchHHHHHhCCcccccccCCChhhhhhhccc
Q 010411          298 REKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNH  377 (511)
Q Consensus       298 k~k~i~~~~~R~~G~CPLTPeEvgl~LralGf~~~T~IYlAsGeiyGg~~~l~~Lr~~FPnl~tKe~L~s~eEL~pf~~~  377 (511)
                      .++.+++...|..+.||++|++++.+++++|+.+.|.||||++++|||.+.|++|++.||++++|+++.+.+|+++|.+ 
T Consensus       228 ~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-  306 (351)
T PF10250_consen  228 GKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND-  306 (351)
T ss_dssp             -GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S------
T ss_pred             ccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc-
Confidence            6677888899999999999999999999999999999999999999999999999999999999999999999998877 


Q ss_pred             cchhhhhhheeccCCCeeeecCCCchhhhhhhhhcccCCc
Q 010411          378 SSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFK  417 (511)
Q Consensus       378 ss~~AALDY~Vcl~SDvFv~t~~GNfa~~V~GhR~y~G~~  417 (511)
                       +++|+||++||++||+||+|..++|+.+|+++|+|.|+.
T Consensus       307 -~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~  345 (351)
T PF10250_consen  307 -DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKP  345 (351)
T ss_dssp             -S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred             -cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCC
Confidence             999999999999999999999888999999999999954

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		511
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 73/502 (14%), Positives = 142/502 (28%), Gaps = 167/502 (33%)

Query: 69  LVPRHVDAVVQSPPPLVPPRNYTSNGFLKVSCNGGLNQMRAAICDMVT-----VAQLLNL 123
           L    +D ++ S   +                +     ++  + +++      +   +  
Sbjct: 46  LSKEEIDHIIMSKDAVS--GTLR---LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100

Query: 124 TLVVPELDKTSF-------WADPSNFEDIFNVR-HFIDSLRDEVRIVRRLPKKYSRKYGY 175
               P +    +       + D   F      R      LR  +  +R  P K     G 
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR--PAKNVLIDG- 157

Query: 176 SPMEMPPV--SW------SNEKYYLQQILPHFSKH--KVLHFNRTDTRLANNGIPFDLQK 225
               +     +W       + K  +Q  +  F      + + N  +T L        LQK
Sbjct: 158 ----VLGSGKTWVALDVCLSYK--VQCKMD-FKIFWLNLKNCNSPETVLEM------LQK 204

Query: 226 LRCRV--NFQGLKFTPK-----IETLGYELVRILQEKGPFVALHLRYEMDML-------- 270
           L  ++  N+             I ++  EL R+L+ K         YE  +L        
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK--------PYENCLLVLLNVQNA 256

Query: 271 ----AFSGCTHGCSM-------GEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEE 319
               AF+     C +          + L              I  +         LTP+E
Sbjct: 257 KAWNAFN---LSCKILLTTRFKQVTDFLSAATT-------THISLDHHSM----TLTPDE 302

Query: 320 A-ALVLQALGIDKDT-----------HIYIAAGEIYGGEKRLAALR----AAFPRIVRKE 363
             +L+L+ L                  + I A  I  G       +         I+   
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 364 M-LLDPAELQ-LFQNHSSQMAALDFMVSTASDIFIPT-----------YDGNMAKVVEGH 410
           + +L+PAE + +F     +++             IPT               M  V + H
Sbjct: 363 LNVLEPAEYRKMFD----RLSVFP------PSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412

Query: 411 RRYLGFKKSILLDR---KILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIA- 466
                 K S L+++   +  + +  ++           + V+L +E  +     R ++  
Sbjct: 413 ------KYS-LVEKQPKESTISIPSIY---------LELKVKLENEYAL----HRSIVDH 452

Query: 467 ------------DKPKEEDYFY 476
                         P  + YFY
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFY 474

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		511
4ap5_A		408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	99.59
3zy2_A		362	Putative GDP-fucose protein O-fucosyltransferase;	99.34
2de0_X		526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	98.06
2hhc_A		330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	97.74

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*	Back alignment and structure

Probab=99.59  E-value=7e-15  Score=151.68  Aligned_cols=297  Identities=16%  Similarity=0.238  Sum_probs=163.7

Q ss_pred             CCCcEEEEEe-cC-cchhhHHHHHHHHHHHHHhcCc----eeecccCCCcccCCC------CCCCccccHHHHHHhcccc
Q 010411           91 TSNGFLKVSC-NG-GLNQMRAAICDMVTVAQLLNLT----LVVPELDKTSFWADP------SNFEDIFNVRHFIDSLRDE  158 (511)
Q Consensus        91 ~snGyl~V~~-nG-GLNqqR~~IcDaV~vAr~LNAT----LViP~L~~~s~W~D~------S~F~dIFDvdhFI~sL~~d  158 (511)
                      ..++||+-.. .| |.|+||...-.|.+.|+.||.|    ||||-...-.-|+-.      -.|++.||++++    +..
T Consensus        20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~   95 (408)
T 4ap5_A           20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN   95 (408)
T ss_dssp             CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred             cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence            4589999875 45 8999999999999999999999    999966433335332      379999999875    345


Q ss_pred             ceEeccCchhhhhhcCC------------------C----CC------ccCCCCcCChHHH----HhhccccccccceEE
Q 010411          159 VRIVRRLPKKYSRKYGY------------------S----PM------EMPPVSWSNEKYY----LQQILPHFSKHKVLH  206 (511)
Q Consensus       159 VrIvk~LP~~~~~~~~~------------------~----~~------~~~p~~ws~~~yY----~~~ilP~l~k~~Vi~  206 (511)
                      |+|+.-  +++.+....                  .    ..      ...+.......++    .+...-......-+.
T Consensus        96 vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~  173 (408)
T 4ap5_A           96 IPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLS  173 (408)
T ss_dssp             SCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEE
T ss_pred             CCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEE
Confidence            555521  111110000                  0    00      0000000000000    000000001111111


Q ss_pred             E----------------------eccCcccccCCCCchhhhhhhhhcccccccchHHHHHHHHHHHHHhhcCCeEEEecc
Q 010411          207 F----------------------NRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLR  264 (511)
Q Consensus       207 l----------------------~~~d~RLa~d~lp~eiQrLRCrvnf~ALrF~~~I~~Lg~~lV~RLr~~G~fiAlHLR  264 (511)
                      +                      ..+...|+.---..+...+|     ..|+|.+.|.+.|++.++..-. ++|+++|+|
T Consensus       174 ~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~-~~~~~~h~r  247 (408)
T 4ap5_A          174 VQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLN-STDDADRIP  247 (408)
T ss_dssp             ECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHC-CCTTTTTCC
T ss_pred             EeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhC-cccceeecc
Confidence            1                      11111121110011222211     3799999999999999887653 578888888


Q ss_pred             cchhhhhhhccCCCCChhHHHHHHHHHhcCccccccccChHHHhcCCCCCCCHHHHH-HHHHHcCCCCCceEEEEecccc
Q 010411          265 YEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAA-LVLQALGIDKDTHIYIAAGEIY  343 (511)
Q Consensus       265 ~E~DMLAfsgC~~g~~~~E~~eL~~~R~~~~~wk~k~i~~~~~R~~G~CPLTPeEvg-l~LralGf~~~T~IYlAsGeiy  343 (511)
                      .+.|+...  |.......-.      -+.-.||+....    ......|=.+-++++ .+.+.+.=-+-+.||||+-+. 
T Consensus       248 ~~~dw~~~--~~~~~~~~~~------~y~~~H~Rr~d~----~~~~~~~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~-  314 (408)
T 4ap5_A          248 FQEDWMKM--KVKLGSALGG------PYLGVHLRRKDF----IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAV-  314 (408)
T ss_dssp             CCSSGGGC--CCCTTCBCCE------EEEEEEECCTTT----TTTTCSSSCCHHHHHHHHHHHHHHHTCSCEEEEECCC-
T ss_pred             cchhHhhh--hcccccccCC------Cccccccccccc----hhhhhccCCCHHHHHHHHHHHHHhcCCCEEEEeCCCc-
Confidence            88777654  3321110000      000012221100    001112311223332 233223222445899998653 


Q ss_pred             CCccchHHHHHhCCcccccccCCChhhhhhhccccchhhhhhheeccCCCeeeecCCCchhhhhhhhhcccCCcc
Q 010411          344 GGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKK  418 (511)
Q Consensus       344 Gg~~~l~~Lr~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDY~Vcl~SDvFv~t~~GNfa~~V~GhR~y~G~~k  418 (511)
                        +..+..|++.+|.++.-..  ..+++..+  ...+.|.||-+||.+||+||+|..++|+..|.-.|.+.|+..
T Consensus       315 --~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~  383 (408)
T 4ap5_A          315 --RKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDP  383 (408)
T ss_dssp             --HHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred             --hhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence              4457889999998764322  23445443  234679999999999999999999999999999999999764

PyMOL of 4ap5

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*	Back alignment and structure

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}	Back alignment and structure

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00