Citrus Sinensis ID: 010415

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-
MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYTTEGNKEECSKNQ
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcccEEccccccccHHHHHHHHHHHHHccccEEEEEEEEEEEccccccccccHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccHHHHHHHccccccEEEccccccccccEEcccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEcccccccccccccccHHHHHHccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccEEEcccccccccccHHHHHHHHcccccccccccccEEEEccccccccccccHHHHHHHHHHHcccccccccccccccccccccccc
cccccccHcHHccccccccHHHHHHccccHHHHcccccccccccEEEEEEccccccccccccHHHHEEccccccccccccccccHHccccccccccccccccccccccccccEEEEcccccEcccccEccHHHHHHHHHHHHHccccEEEEEEEHHHHccccccccccHHHHHHHHHHHHcccEEEEEEEcccEcccccccccEcccHHHHHHHHHcHHHEEEcccccEEEEEEcHHHcccccEccEcHHHHHHHHHHHHHHHcHHHHHcccEEEEEEcccHHHEcccccccHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccccccHHHHHHccccEccEcccHHHHHHHHHcccEEEEccccccHHHccHHcccccccHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHccccccccccccEEEEccccHHHHcHHHHHHHHHHHHHHccccccccHHcccccccccccccc
MAISSTQFCdilrapgasspitsslshkqtlftsqrvpvtfhsltycnvtycnacrfkrTQFRTLAAIGeweeeteddphggdsvdaaddmkavhlppklperdfagtpyvpvyVMLPLgiidmncelvdpeILVNQLKILKSINVDGVMVDCWWGiveahtpqvynwsgyRRLFQIVRELELKLQVVMSFHecggnvgddvhiplpqwvmeigqnnpeiyftdregrrnsecltwgidkervlrGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEvglgpcgelryptypakhgwkypgigefqcYDKYLMKSLSKAAEARGHlfwargpafegtcISAKLSGIHWWYKTASHAAeltagfynpsnrdgyAPIAAMLKKHGvalnftcvelrtvdqhedfpealadpeGLVWQVLNAAWDVSILVASenalpcydregyNKILenakplndpdgrhlsaftylrlspvltdghnfIEFERFVKRMhgeavpdlrvyttegnkeecsknq
MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGeweeeteddpHGGDSVDAADDMKAVHLPPklperdfagtPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSEcltwgidkervlrgrTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENakplndpdgRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMhgeavpdlrvyttegnkeecsknq
MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYTTEGNKEECSKNQ
**********I******************TLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEW********************************DFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYT************
*************************************************************************************************************YVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQ*E******ADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDL****************
MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEW***********DSVDAADDMKAVHLPPKLPERDFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYTT***********
*******FCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEW***********************************GTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHG**********************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKRTQFRTLAAIGEWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGPAFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYTTEGNKEECSKNQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query511 2.2.26 [Sep-21-2011]
O65258542 Beta-amylase 2, chloropla yes no 0.898 0.846 0.673 0.0
O80831691 Beta-amylase 7 OS=Arabido no no 0.804 0.594 0.614 1e-174
Q9FH80689 Beta-amylase 8 OS=Arabido no no 0.751 0.557 0.517 1e-130
P10538496 Beta-amylase OS=Glycine m no no 0.739 0.762 0.469 1e-110
O64407496 Beta-amylase OS=Vigna ung N/A no 0.739 0.762 0.466 1e-110
O22585496 Beta-amylase OS=Medicago N/A no 0.739 0.762 0.457 1e-109
O65015496 Beta-amylase OS=Trifolium N/A no 0.739 0.762 0.466 1e-108
P25853498 Beta-amylase 5 OS=Arabido no no 0.739 0.759 0.465 1e-108
P16098535 Beta-amylase OS=Hordeum v N/A no 0.735 0.702 0.468 1e-107
P82993535 Beta-amylase OS=Hordeum v N/A no 0.735 0.702 0.468 1e-107
>sp|O65258|BAM2_ARATH Beta-amylase 2, chloroplastic OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=2 Back     alignment and function desciption
 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/520 (67%), Positives = 387/520 (74%), Gaps = 61/520 (11%)

Query: 43  SLTYCNVTYCNACRFKRTQFRTLAAIGEWEEETEDD----PHGGDSVDAADDMKAVHLPP 98
           SL +    +     F   +   LA +    E TE+D        DS D   D + VH   
Sbjct: 27  SLPFSVGDWRGVSTFSGARPLVLAKVKLRAESTEEDRVPIDDDDDSTDQLVDEEIVHFE- 85

Query: 99  KLPERDFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIV 158
              ERDFAGT  VPVYVMLPLG+IDMN E+V+PE L++QL+ LKS+NVDGVMVDCWWGIV
Sbjct: 86  ---ERDFAGTACVPVYVMLPLGVIDMNSEVVEPEELLDQLRTLKSVNVDGVMVDCWWGIV 142

Query: 159 EAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNP 218
           E+HTPQVYNWSGY++LFQ++REL LK+QVVMSFHECGGNVGDDVHI +P+WV EIGQ+NP
Sbjct: 143 ESHTPQVYNWSGYKKLFQMIRELGLKIQVVMSFHECGGNVGDDVHIQIPEWVREIGQSNP 202

Query: 219 EIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEV 278
           +IYFTD  GRRN+ECLTWGIDK+RVLRGRTA+EVYFDYMRSFRVEF+EFF + II EIEV
Sbjct: 203 DIYFTDSAGRRNTECLTWGIDKQRVLRGRTALEVYFDYMRSFRVEFDEFFEEKIIPEIEV 262

Query: 279 GLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP------ 332
           GLGPCGELRYP+YPA+ GWKYPGIGEFQCYDKYLM SL +AAE RGH FW RGP      
Sbjct: 263 GLGPCGELRYPSYPAQFGWKYPGIGEFQCYDKYLMNSLKEAAEVRGHSFWGRGPDNTETY 322

Query: 333 ---------------------------------------------AFEGTCISAKLSGIH 347
                                                        AFEGTCI+AKLSGIH
Sbjct: 323 NSTPHGTGFFRDGGDYDSYYGRFFLNWYSRVLIDHGDRVLAMANLAFEGTCIAAKLSGIH 382

Query: 348 WWYKTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALA 407
           WWYKTASHAAELTAGFYN SNRDGY PIAAM KKH  ALNFTCVELRT+DQHEDFPEALA
Sbjct: 383 WWYKTASHAAELTAGFYNSSNRDGYGPIAAMFKKHDAALNFTCVELRTLDQHEDFPEALA 442

Query: 408 DPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRL 467
           DPEGLVWQVLNAAWD SI VASENALPCYDREGYNKILENAKPL DPDGRHLS FTYLRL
Sbjct: 443 DPEGLVWQVLNAAWDASIPVASENALPCYDREGYNKILENAKPLTDPDGRHLSCFTYLRL 502

Query: 468 SPVLTDGHNFIEFERFVKRMHGEAVPDLRVY--TTEGNKE 505
           +P L +  NF EFERF+KRMHGEAVPDL +   T E N E
Sbjct: 503 NPTLMESQNFKEFERFLKRMHGEAVPDLGLAPGTQETNPE 542
Low beta-amylase activity. Interacts poorly with starch or other alpha-1,4-glucan.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2
>sp|O80831|BAM7_ARATH Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2 Back     alignment and function description
>sp|Q9FH80|BAM8_ARATH Beta-amylase 8 OS=Arabidopsis thaliana GN=BAM8 PE=2 SV=1 Back     alignment and function description
>sp|P10538|AMYB_SOYBN Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3 Back     alignment and function description
>sp|O64407|AMYB_VIGUN Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|O65015|AMYB_TRIRP Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1 Back     alignment and function description
>sp|P25853|BAM5_ARATH Beta-amylase 5 OS=Arabidopsis thaliana GN=BAM5 PE=2 SV=1 Back     alignment and function description
>sp|P16098|AMYB_HORVU Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1 Back     alignment and function description
>sp|P82993|AMYB_HORVS Beta-amylase OS=Hordeum vulgare subsp. spontaneum GN=BMY1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
255541588609 Beta-amylase, putative [Ricinus communis 0.933 0.783 0.676 0.0
359489614554 PREDICTED: beta-amylase 2, chloroplastic 0.825 0.761 0.740 0.0
297814281542 beta-amylase 9 [Arabidopsis lyrata subsp 0.819 0.773 0.719 0.0
225454224 699 PREDICTED: beta-amylase 7-like [Vitis vi 0.857 0.626 0.683 0.0
297745288 657 unnamed protein product [Vitis vinifera] 0.857 0.666 0.683 0.0
224130270437 predicted protein [Populus trichocarpa] 0.755 0.883 0.773 0.0
145339852542 beta-amylase 2 [Arabidopsis thaliana] gi 0.898 0.846 0.673 0.0
255541586 704 Beta-amylase, putative [Ricinus communis 0.857 0.622 0.666 0.0
414884709 679 TPA: hypothetical protein ZEAMMB73_15035 0.821 0.618 0.685 0.0
222642133 650 hypothetical protein OsJ_30408 [Oryza sa 0.786 0.618 0.710 0.0
>gi|255541588|ref|XP_002511858.1| Beta-amylase, putative [Ricinus communis] gi|223549038|gb|EEF50527.1| Beta-amylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/547 (67%), Positives = 414/547 (75%), Gaps = 70/547 (12%)

Query: 1   MAISSTQFCDILRAPGASSPITSSLSHKQTLFTSQRVPVTFHSLTYCNVTYCNACRFKR- 59
           MA+SS Q   +L  P   SP  S+ S  Q+   S        S   C+ +  N+C F+  
Sbjct: 1   MAVSSHQ---LLHCP---SPYYSTASKAQSFLASI-------STFCCSSSEFNSCGFRAS 47

Query: 60  -----TQFRTLAAIGEWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAGTPYVPVY 114
                T+ + LA +   ++ T++D    +SVD+ DD +   +P ++ ERDF GT YVPVY
Sbjct: 48  MVSFCTRSQNLAVVRGKKQRTDNDSLIDNSVDSIDDNQVSDIPVEVYERDFTGTAYVPVY 107

Query: 115 VMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRL 174
           VMLPLG+I+MNCELVDPE L N LKILKS NVDGVM+DCWWGIVE + PQVY+WSGY+RL
Sbjct: 108 VMLPLGVINMNCELVDPEGLWNGLKILKSANVDGVMIDCWWGIVEGNAPQVYDWSGYKRL 167

Query: 175 FQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECL 234
           FQIV EL+LKLQVVMSFHECGGNVGDDVHIPLP WV EIGQ NP+IYFTDREGRRN+ECL
Sbjct: 168 FQIVNELKLKLQVVMSFHECGGNVGDDVHIPLPHWVTEIGQTNPDIYFTDREGRRNTECL 227

Query: 235 TWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAK 294
           TWGI KERVL+GRTAVEVYFDYMRSFRVEF+EFF DG+I+EIEVGLGPCGELRYP+YPAK
Sbjct: 228 TWGIGKERVLKGRTAVEVYFDYMRSFRVEFDEFFEDGMISEIEVGLGPCGELRYPSYPAK 287

Query: 295 HGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP---------------------- 332
           HGW+YPGIGEFQCYDKYLM+SLSKAAEARGH FWARGP                      
Sbjct: 288 HGWRYPGIGEFQCYDKYLMRSLSKAAEARGHSFWARGPDNAGFYNSAPHETGFFRDGGDY 347

Query: 333 -----------------------------AFEGTCISAKLSGIHWWYKTASHAAELTAGF 363
                                        AFEGTCISAK+SGIHWWYKTASHAAELTAGF
Sbjct: 348 DSYYGRFFLNWYSRVLIDHGDRVLALANLAFEGTCISAKVSGIHWWYKTASHAAELTAGF 407

Query: 364 YNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDV 423
           YNPSNRDGYAPIAAML KHGV LNFTCVE+RT++Q+EDFPEALADPEGLVWQVLNAAWD 
Sbjct: 408 YNPSNRDGYAPIAAMLNKHGVGLNFTCVEMRTLNQNEDFPEALADPEGLVWQVLNAAWDA 467

Query: 424 SILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFERF 483
            I VASENALPCYDREGYNKILENAKPL DPDGRHLS FTYLRLS VL + HNFIEFERF
Sbjct: 468 CIPVASENALPCYDREGYNKILENAKPLEDPDGRHLSVFTYLRLSAVLMERHNFIEFERF 527

Query: 484 VKRMHGE 490
           VKRMHG+
Sbjct: 528 VKRMHGD 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359489614|ref|XP_002274612.2| PREDICTED: beta-amylase 2, chloroplastic-like [Vitis vinifera] gi|297745290|emb|CBI40370.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297814281|ref|XP_002875024.1| beta-amylase 9 [Arabidopsis lyrata subsp. lyrata] gi|297320861|gb|EFH51283.1| beta-amylase 9 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225454224|ref|XP_002273843.1| PREDICTED: beta-amylase 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745288|emb|CBI40368.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130270|ref|XP_002320794.1| predicted protein [Populus trichocarpa] gi|222861567|gb|EEE99109.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|145339852|ref|NP_191958.3| beta-amylase 2 [Arabidopsis thaliana] gi|294956513|sp|O65258.2|BAM2_ARATH RecName: Full=Beta-amylase 2, chloroplastic; AltName: Full=1,4-alpha-D-glucan maltohydrolase; AltName: Full=Beta-amylase 9; Flags: Precursor gi|332656489|gb|AEE81889.1| beta-amylase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255541586|ref|XP_002511857.1| Beta-amylase, putative [Ricinus communis] gi|223549037|gb|EEF50526.1| Beta-amylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|414884709|tpg|DAA60723.1| TPA: hypothetical protein ZEAMMB73_150352 [Zea mays] Back     alignment and taxonomy information
>gi|222642133|gb|EEE70265.1| hypothetical protein OsJ_30408 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
TAIR|locus:2062535577 BAM6 "beta-amylase 6" [Arabido 0.432 0.383 0.574 1.1e-110
TAIR|locus:2127033542 BAM2 "beta-amylase 2" [Arabido 0.516 0.487 0.735 1e-109
TAIR|locus:2050720691 BAM7 "beta-amylase 7" [Arabido 0.500 0.370 0.726 1.5e-108
TAIR|locus:2129810498 BAM5 "beta-amylase 5" [Arabido 0.428 0.439 0.559 8.2e-106
TAIR|locus:2130504548 CT-BMY "chloroplast beta-amyla 0.432 0.403 0.558 4.6e-101
TAIR|locus:2158455689 BMY2 "beta-amylase 2" [Arabido 0.455 0.338 0.622 1e-82
TAIR|locus:2162152531 BAM4 "beta-amylase 4" [Arabido 0.457 0.440 0.433 2e-75
TAIR|locus:2076086575 BAM1 "beta-amylase 1" [Arabido 0.440 0.391 0.504 1.9e-60
TAIR|locus:2180029536 BMY3 "beta-amylase 3" [Arabido 0.414 0.395 0.391 7.8e-56
TAIR|locus:2062535 BAM6 "beta-amylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 707 (253.9 bits), Expect = 1.1e-110, Sum P(2) = 1.1e-110
 Identities = 127/221 (57%), Positives = 156/221 (70%)

Query:   108 TPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYN 167
             T YVPVYVML LG+I  +  L + E L  QLK LK   VDGVMVD WWGIVE+  P+ Y 
Sbjct:    75 TNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVESKGPKQYQ 134

Query:   168 WSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREG 227
             WS YR LF IV+   LKLQ +MSFH CGGN+GDDV+IP+P+WV+EIG +NP+I++T++ G
Sbjct:   135 WSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDIFYTNKSG 194

Query:   228 RRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELR 287
              RN ECL+  +D   + RGRTAVE+Y DYM+SFR    +F   G+I +IEVGLGP GELR
Sbjct:   195 NRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGPAGELR 254

Query:   288 YPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFW 328
             YP+Y    GW +PGIGEFQCYDKYL     +     GH  W
Sbjct:   255 YPSYSETQGWVFPGIGEFQCYDKYLRSDYEEEVRRIGHPEW 295
GO:0000272 "polysaccharide catabolic process" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016161 "beta-amylase activity" evidence=IEA;ISS
GO:0043169 "cation binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2127033 BAM2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129810 BAM5 "beta-amylase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130504 CT-BMY "chloroplast beta-amylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162152 BAM4 "beta-amylase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076086 BAM1 "beta-amylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180029 BMY3 "beta-amylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65258BAM2_ARATH3, ., 2, ., 1, ., 20.67300.89820.8468yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.976
3rd Layer3.2.1.20.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
PLN02905702 PLN02905, PLN02905, beta-amylase 0.0
PLN02705681 PLN02705, PLN02705, beta-amylase 0.0
PLN02803548 PLN02803, PLN02803, beta-amylase 1e-144
PLN00197573 PLN00197, PLN00197, beta-amylase; Provisional 1e-125
PLN02801 517 PLN02801, PLN02801, beta-amylase 1e-105
pfam01373399 pfam01373, Glyco_hydro_14, Glycosyl hydrolase fami 2e-92
PLN02161531 PLN02161, PLN02161, beta-amylase 7e-82
PLN02801517 PLN02801, PLN02801, beta-amylase 4e-56
>gnl|CDD|178493 PLN02905, PLN02905, beta-amylase Back     alignment and domain information 
 Score =  787 bits (2034), Expect = 0.0
 Identities = 350/555 (63%), Positives = 404/555 (72%), Gaps = 74/555 (13%)

Query: 13  RAPGASSPI--TSSLSH---KQTLFTSQRVPVTFHSLTYCNVTYCNACRFK--------- 58
           R  G +S +  TSS SH   +QT   S R      S  Y +    NACR K         
Sbjct: 152 RPAGGTSAVAATSSSSHLVSQQTPPPSLRGV----SSGYRSSVEYNACRMKGVFVPASSP 207

Query: 59  -----RTQFRTLAAIGEWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAGTPYVPV 113
                      +  +G+   + E+    G SVDA +  + + +PPKL ERDFAGTPYVPV
Sbjct: 208 YDVSPSQSSELVVVMGDRGSQNENHGLIGGSVDAINSKQILDIPPKLTERDFAGTPYVPV 267

Query: 114 YVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRR 173
           YVMLPLG+I+M CEL DP+ L+ QL+ILKSINVDGV VDCWWGIVEAH PQ YNW+GY+R
Sbjct: 268 YVMLPLGVINMKCELADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNGYKR 327

Query: 174 LFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSEC 233
           LFQ+VREL+LKLQVVMSFHECGGNVGDDV IPLP WV EIG++NP+I+FTDREGRRN EC
Sbjct: 328 LFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPEC 387

Query: 234 LTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPA 293
           L+WGIDKER+LRGRTA+EVYFDYMRSFRVEF+EFF DG+I+ +EVGLGPCGELRYP+ P 
Sbjct: 388 LSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFFEDGVISMVEVGLGPCGELRYPSCPV 447

Query: 294 KHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP--------------------- 332
           KHGW+YPGIGEFQCYD+YL+KSL KAAEARGHLFWARGP                     
Sbjct: 448 KHGWRYPGIGEFQCYDQYLLKSLRKAAEARGHLFWARGPDNTGSYNSQPHETGFFCDGGD 507

Query: 333 ------------------------------AFEGTCISAKLSGIHWWYKTASHAAELTAG 362
                                         AFEGTCI+AKL G+HWWYKTASHAAELTAG
Sbjct: 508 YDGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFEGTCIAAKLPGVHWWYKTASHAAELTAG 567

Query: 363 FYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWD 422
           FYNP NRDGYA IA+MLKKHG ALNF C E++ +++ +DF EAL DPEGL WQVLNAAWD
Sbjct: 568 FYNPCNRDGYAAIASMLKKHGAALNFVCGEVQMLNRPDDFSEALGDPEGLAWQVLNAAWD 627

Query: 423 VSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRLSPVLTDGHNFIEFER 482
           V   VASEN+LPC+DR GYNKILENAKPLNDPDGRH S+FTYLRLSP+L + HNF+EFER
Sbjct: 628 VDTPVASENSLPCHDRVGYNKILENAKPLNDPDGRHFSSFTYLRLSPLLMERHNFVEFER 687

Query: 483 FVKRMHGEAVPDLRV 497
           FVKRMHGEAV DL++
Sbjct: 688 FVKRMHGEAVLDLQL 702

Length = 702
>gnl|CDD|178307 PLN02705, PLN02705, beta-amylase Back     alignment and domain information
>gnl|CDD|178400 PLN02803, PLN02803, beta-amylase Back     alignment and domain information
>gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional Back     alignment and domain information
>gnl|CDD|215431 PLN02801, PLN02801, beta-amylase Back     alignment and domain information
>gnl|CDD|216462 pfam01373, Glyco_hydro_14, Glycosyl hydrolase family 14 Back     alignment and domain information
>gnl|CDD|177820 PLN02161, PLN02161, beta-amylase Back     alignment and domain information
>gnl|CDD|215431 PLN02801, PLN02801, beta-amylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 511
PLN02905702 beta-amylase 100.0
PLN02705681 beta-amylase 100.0
PLN02801517 beta-amylase 100.0
PLN02803548 beta-amylase 100.0
PLN00197573 beta-amylase; Provisional 100.0
PLN02161531 beta-amylase 100.0
PF01373402 Glyco_hydro_14: Glycosyl hydrolase family 14; Inte 100.0
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.84
COG1874 673 LacA Beta-galactosidase [Carbohydrate transport an 99.5
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 98.76
PLN03059 840 beta-galactosidase; Provisional 98.25
TIGR03356427 BGL beta-galactosidase. 97.77
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 97.47
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.44
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 97.39
KOG0496 649 consensus Beta-galactosidase [Carbohydrate transpo 97.19
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 96.93
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 96.81
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 96.65
PRK13511469 6-phospho-beta-galactosidase; Provisional 96.45
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 96.28
PLN02814504 beta-glucosidase 96.24
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 96.2
PLN02849503 beta-glucosidase 96.17
PLN02998497 beta-glucosidase 96.13
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 95.91
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 95.86
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 94.98
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 93.9
cd03465330 URO-D_like The URO-D _like protein superfamily inc 93.55
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 91.86
PF14488166 DUF4434: Domain of unknown function (DUF4434) 91.18
PRK02412253 aroD 3-dehydroquinate dehydratase; Provisional 91.08
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 90.94
PRK10785598 maltodextrin glucosidase; Provisional 90.14
PRK11572248 copper homeostasis protein CutC; Provisional 89.87
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 89.08
cd00465306 URO-D_CIMS_like The URO-D_CIMS_like protein superf 88.32
PF03932201 CutC: CutC family; InterPro: IPR005627 Copper tran 88.08
PF03659386 Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int 87.63
cd00502225 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinat 87.42
PF01487224 DHquinase_I: Type I 3-dehydroquinase; InterPro: IP 87.3
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 85.82
TIGR01093228 aroD 3-dehydroquinate dehydratase, type I. Type II 85.77
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 84.43
TIGR01463340 mtaA_cmuA methyltransferase, MtaA/CmuA family. Thi 84.34
PHA0044259 host recBCD nuclease inhibitor 83.97
PRK01060281 endonuclease IV; Provisional 83.34
PRK13111258 trpA tryptophan synthase subunit alpha; Provisiona 82.1
cd03308378 CmuA_CmuC_like CmuA_CmuC_like: uncharacterized pro 81.56
>PLN02905 beta-amylase Back     alignment and domain information 
Probab=100.00  E-value=1.2e-175  Score=1388.12  Aligned_cols=453  Identities=75%  Similarity=1.322  Sum_probs=435.9

Q ss_pred             cccceecccccccccccc-------------cccchhhhcc-cccccccCCCCCCCCcccccccccccCCCCCCCCCCCC
Q 010415           42 HSLTYCNVTYCNACRFKR-------------TQFRTLAAIG-EWEEETEDDPHGGDSVDAADDMKAVHLPPKLPERDFAG  107 (511)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (511)
                      -|.+|+|++++|+|++|+             .++..+++|. ++...++++.++++|++|++++||++.++.+++.++++
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  261 (702)
T PLN02905        182 VSSGYRSSVEYNACRMKGVFVPASSPYDVSPSQSSELVVVMGDRGSQNENHGLIGGSVDAINSKQILDIPPKLTERDFAG  261 (702)
T ss_pred             cccccccccccchhhhccccccCCCccccccCCCCcceeEeecccccccccCCccCcccccchhhhhhhhcccccccccC
Confidence            478999999999999999             4445565554 78899999999889999999999997779999999999


Q ss_pred             CCCccEEEeeccceeeCCCcccChHHHHHHHHHHHHcCcceEEEeeeeeeeecCCCceecchhHHHHHHHHHHcCCcEEE
Q 010415          108 TPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQV  187 (511)
Q Consensus       108 ~~~vpvyVMLPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdvWWGiVE~~~p~~YdWs~Y~~l~~mvr~~GLKvqv  187 (511)
                      +++||||||||||+|+.+|+++++++|+++|++||++||||||||||||+||+++|++|||++|++||+|||++||||||
T Consensus       262 ~~~VpVyVMLPLd~V~~~~~l~~~~al~a~L~aLK~aGVdGVmvDVWWGiVE~~gP~~YdWsgY~~L~~mvr~~GLKlqv  341 (702)
T PLN02905        262 TPYVPVYVMLPLGVINMKCELADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQV  341 (702)
T ss_pred             CCceeEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCCCcCCcHHHHHHHHHHHHcCCeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeeccCCCCCCCccCCCChhHHhhhccCCCeeeecCCCCcccceeeeccCccccccCCchhHHHHHHHHHHHHHHhhh
Q 010415          188 VMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEF  267 (511)
Q Consensus       188 VmsFHqCGGNVGD~~~IpLP~WV~e~g~~~PDI~ftDr~G~rn~E~lSl~~D~~pvl~GRTpi~~Y~dfm~SF~~~f~~~  267 (511)
                      |||||||||||||+|+||||+||++++++|||||||||+|+||+||||||+|++|||+||||+|+|+|||+|||++|++|
T Consensus       342 VMSFHqCGGNVGD~~~IPLP~WV~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f  421 (702)
T PLN02905        342 VMSFHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEF  421 (702)
T ss_pred             EEEecccCCCCCCcccccCCHHHHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCceEEEEEeecccCcccCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHHcCcccccCCC---------------
Q 010415          268 FVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP---------------  332 (511)
Q Consensus       268 ~g~~~I~eI~VGLGPaGELRYPSyp~~~GW~~PGiGEFQCYDky~~~~lr~~a~~~G~~~Wg~gP---------------  332 (511)
                      +++++|+||+|||||||||||||||+..||+||||||||||||||+++|+++|+++||++||.||               
T Consensus       422 l~~g~I~eI~VGLGPaGELRYPSYp~s~GW~fPGiGEFQCYDKymla~Lk~aA~a~GhpeWG~gP~dAG~YN~~P~~TgF  501 (702)
T PLN02905        422 FEDGVISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLRKAAEARGHLFWARGPDNTGSYNSQPHETGF  501 (702)
T ss_pred             hcCCceEEEEeccCCCccccCCCCcCcCCCCCCCcceeeeccHHHHHHHHHHHHHhCcHhhccCCCCCCccCCCCCCCCC
Confidence            99889999999999999999999999999999999999999999999999999999999999877               


Q ss_pred             ------------------------------------CCCCceeeeEeccccccCCCCCCHHHHHhcccCCCCCCChHHHH
Q 010415          333 ------------------------------------AFEGTCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIA  376 (511)
Q Consensus       333 ------------------------------------~F~~v~l~~Kv~giHWwy~t~sHaAElTAGyYN~~~rDGY~~Ia  376 (511)
                                                          +|++++|++|||||||||+++||||||||||||+++||||+||+
T Consensus       502 F~~~Gsw~S~YGkFFLsWYS~~Ll~HGDrVLs~A~~vF~g~~LaaKVaGIHWWY~t~SHAAELTAGYYNt~~rDGY~pIa  581 (702)
T PLN02905        502 FCDGGDYDGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFEGTCIAAKLPGVHWWYKTASHAAELTAGFYNPCNRDGYAAIA  581 (702)
T ss_pred             CCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCchHhhccccccCCCcccHHHHH
Confidence                                                79999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCcEEEEeeccccccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccCcCCCcchHHHHHHhcCCCCCCCC
Q 010415          377 AMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDG  456 (511)
Q Consensus       377 ~mf~kh~~~l~FTClEM~d~~~~~~~~~a~s~Pe~Lv~QV~~aA~~~Gv~vaGENAL~~~d~~~y~qI~~~a~~~~~~~~  456 (511)
                      +|||||+|+|+|||+||+|++|++.+++++|+||+||+||+++||++||+|+|||||++||.++|+||++|++++++++.
T Consensus       582 ~mfarh~~~l~FTClEM~D~eqp~~~~~a~ssPE~LV~QV~~aA~~~GV~vaGENAL~r~D~~ay~qI~~na~~~~~~~~  661 (702)
T PLN02905        582 SMLKKHGAALNFVCGEVQMLNRPDDFSEALGDPEGLAWQVLNAAWDVDTPVASENSLPCHDRVGYNKILENAKPLNDPDG  661 (702)
T ss_pred             HHHHHcCCeEEEEecccccCCCCCccccccCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhhcccCCcc
Confidence            99999999999999999999987545689999999999999999999999999999999999999999999999888878


Q ss_pred             CcceeeEEeeCCccccCCcChhHHHHHHHHhccCCCCC
Q 010415          457 RHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAVPD  494 (511)
Q Consensus       457 ~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~  494 (511)
                      .++++||||||++.||+++||++|++|||+||+++..+
T Consensus       662 ~~l~~FTYLRm~~~lf~~~nf~~F~~FVr~M~~~~~~~  699 (702)
T PLN02905        662 RHFSSFTYLRLSPLLMERHNFVEFERFVKRMHGEAVLD  699 (702)
T ss_pred             CceeeeEEecCchhhcCcchHHHHHHHHHHhccccccc
Confidence            78999999999999999999999999999999986543

>PLN02705 beta-amylase Back     alignment and domain information
>PLN02801 beta-amylase Back     alignment and domain information
>PLN02803 beta-amylase Back     alignment and domain information
>PLN00197 beta-amylase; Provisional Back     alignment and domain information
>PLN02161 beta-amylase Back     alignment and domain information
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK11572 copper homeostasis protein CutC; Provisional Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases Back     alignment and domain information
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF Back     alignment and domain information
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase Back     alignment and domain information
>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4 Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR01093 aroD 3-dehydroquinate dehydratase, type I Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR01463 mtaA_cmuA methyltransferase, MtaA/CmuA family Back     alignment and domain information
>PHA00442 host recBCD nuclease inhibitor Back     alignment and domain information
>PRK01060 endonuclease IV; Provisional Back     alignment and domain information
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd03308 CmuA_CmuC_like CmuA_CmuC_like: uncharacterized protein family similar to uroporphyrinogen decarboxylase (URO-D) and the methyltransferases CmuA and CmuC Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
1bya_A495 Crystal Structures Of Soybean Beta-Amylase Reacted 1e-111
1q6c_A495 Crystal Structure Of Soybean Beta-Amylase Complexed 1e-111
1ukp_A495 Crystal Structure Of Soybean Beta-Amylase Mutant Su 1e-111
1btc_A491 Three-Dimensional Structure Of Soybean Beta-Amylase 1e-111
1uko_A495 Crystal Structure Of Soybean Beta-Amylase Mutant Su 1e-111
1wdr_A495 The Role Of An Inner Loop In The Catalytic Mechanis 1e-111
1v3h_A495 The Roles Of Glu186 And Glu380 In The Catalytic Rea 1e-111
1v3i_A495 The Roles Of Glu186 And Glu380 In The Catalytic Rea 1e-111
1wds_A495 The Role Of An Inner Loop In The Catalytic Mechanis 1e-111
1wdq_A495 The Role Of An Inner Loop In The Catalytic Mechanis 1e-110
1q6d_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (M 1e-110
1q6g_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (N 1e-110
2dqx_A495 Mutant Beta-Amylase (W55r) From Soy Bean Length = 4 1e-110
1q6e_A495 Crystal Structure Of Soybean Beta-Amylase Mutant (E 1e-110
2xff_A535 Crystal Structure Of Barley Beta-Amylase Complexed 1e-108
1b1y_A500 Sevenfold Mutant Of Barley Beta-Amylase Length = 50 1e-107
1fa2_A498 Crystal Structure Of Beta-Amylase From Sweet Potato 3e-98
3voc_A419 Crystal Structure Of The Catalytic Domain Of Beta-a 1e-34
1vep_A516 Crystal Structure Analysis Of Triple (T47mY164ET328 4e-34
1ven_A516 Crystal Structure Analysis Of Y164eMALTOSE OF BACIL 1e-32
1b90_A516 Bacillus Cereus Beta-Amylase Apo Form Length = 516 6e-32
1veo_A516 Crystal Structure Analysis Of Y164fMALTOSE OF BACIL 9e-32
1itc_A516 Beta-amylase From Bacillus Cereus Var. Mycoides Com 3e-31
>pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis Length = 495 Back     alignment and structure 
Iteration: 1

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/437 (46%), Positives = 263/437 (60%), Gaps = 59/437 (13%)
Query: 110 YVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWS 169
           YVPVYVMLPLG+++++    DP+ L  QL  L++  VDGVMVD WWGI+E   P+ Y+W 
Sbjct: 11  YVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWR 70
Query: 170 GYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRR 229
            YR LFQ+V+E  L LQ +MSFH+CGGNVGD V+IP+PQWV++IG++N +I++T+R G R
Sbjct: 71  AYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTR 130
Query: 230 NSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYP 289
           N E LT G+D E +  GRTA+E+Y DYM+SFR   ++F   G+I +IEVGLGP GELRYP
Sbjct: 131 NKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYP 190
Query: 290 TYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFW--------------------- 328
           +YP   GW++P IGEFQCYDKYL      A    GH  W                     
Sbjct: 191 SYPQSQGWEFPRIGEFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDVPESTGFFKS 250
Query: 329 -----------------------------ARGPAFEGTCI--SAKLSGIHWWYKTASHAA 357
                                            AF G  +  + K+SGIHWWYK  +HAA
Sbjct: 251 NGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAA 310
Query: 358 ELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVL 417
           ELTAG+YN ++RDGY PIA ML +H   LNFTC+E+R  +Q  D   A + P+ LV QVL
Sbjct: 311 ELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSD---AKSGPQELVQQVL 367
Query: 418 NAAWDVSILVASENALPCYDREGYNKILENAKPL----NDPDGRHLSAFTYLRLSPVLTD 473
           +  W   I VA ENALP YD   YN+I+ NAKP     N P    +   TYLRLS  L  
Sbjct: 368 SGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQ 427
Query: 474 GHNFIEFERFVKRMHGE 490
             NF  F++FV +MH +
Sbjct: 428 KSNFNIFKKFVLKMHAD 444
>pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose Length = 495 Back     alignment and structure
>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 Back     alignment and structure
>pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodextrin Length = 491 Back     alignment and structure
>pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 Back     alignment and structure
>pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase Length = 495 Back     alignment and structure
>pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 Back     alignment and structure
>pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum Length = 495 Back     alignment and structure
>pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum Length = 495 Back     alignment and structure
>pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean Length = 495 Back     alignment and structure
>pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 Length = 495 Back     alignment and structure
>pdb|2XFF|A Chain A, Crystal Structure Of Barley Beta-Amylase Complexed With Acarbose Length = 535 Back     alignment and structure
>pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase Length = 500 Back     alignment and structure
>pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato Length = 498 Back     alignment and structure
>pdb|3VOC|A Chain A, Crystal Structure Of The Catalytic Domain Of Beta-amylase From Paenibacillus Polymyxa Length = 419 Back     alignment and structure
>pdb|1VEP|A Chain A, Crystal Structure Analysis Of Triple (T47mY164ET328N) MALTOSE OF BACILLUS CEREUS BETA-Amylase At Ph 6.5 Length = 516 Back     alignment and structure
>pdb|1VEN|A Chain A, Crystal Structure Analysis Of Y164eMALTOSE OF BACILUS Cereus Beta-Amylase At Ph 4.6 Length = 516 Back     alignment and structure
>pdb|1B90|A Chain A, Bacillus Cereus Beta-Amylase Apo Form Length = 516 Back     alignment and structure
>pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS Cereus Beta-Amylase At Ph 4.6 Length = 516 Back     alignment and structure
>pdb|1ITC|A Chain A, Beta-amylase From Bacillus Cereus Var. Mycoides Complexed With Maltopentaose Length = 516 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
2xfr_A535 Beta-amylase; hydrolase, carbohydrate metabolism, 0.0
1fa2_A498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 0.0
1wdp_A495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 0.0
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 1e-134
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Length = 535 Back     alignment and structure
 Score =  543 bits (1401), Expect = 0.0
 Identities = 204/445 (45%), Positives = 258/445 (57%), Gaps = 61/445 (13%)

Query: 108 TPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYN 167
             YV VYVMLPL  + +N      + L  QL+ L    VDGVMVD WWG+VE   P+ Y+
Sbjct: 7   GNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYD 66

Query: 168 WSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREG 227
           WS Y++LF++V++  LKLQ +MSFH+CGGNVGD V+IP+PQWV ++G  +P+I++TD  G
Sbjct: 67  WSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHG 126

Query: 228 RRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELR 287
            RN E LT G+D + +  GR+AV++Y DYM SFR    EF   G+I +IEVGLGP GE+R
Sbjct: 127 TRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFLDAGVIVDIEVGLGPAGEMR 186

Query: 288 YPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP--------------- 332
           YP+YP  HGW +PGIGEF CYDKYL      AA A GH  W   P               
Sbjct: 187 YPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEW-EFPNDVGQYNDTPERTQF 245

Query: 333 ------------------------------------AFEGTC--ISAKLSGIHWWYKTAS 354
                                                F G    ++ K+SGIHWWYK  S
Sbjct: 246 FRDNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPS 305

Query: 355 HAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVW 414
           HAAELTAG+YN  +RDGY  IA MLK+H  ++NFTC E+R  +Q     +A++ PE LV 
Sbjct: 306 HAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQS---SQAMSAPEELVQ 362

Query: 415 QVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLRLSPV 470
           QVL+A W   + VA ENALP YD   YN IL NA+P     + P    L  FTYLRLS  
Sbjct: 363 QVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQ 422

Query: 471 LTDGHNFIEFERFVKRMHGEAVPDL 495
           L +G N+  F+ FV RMH     D 
Sbjct: 423 LVEGQNYANFKTFVDRMHANLPRDP 447
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Length = 498 Back     alignment and structure
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Length = 495 Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Length = 516 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
1wdp_A495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 100.0
1fa2_A498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 100.0
2xfr_A535 Beta-amylase; hydrolase, carbohydrate metabolism, 100.0
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 100.0
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 99.73
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 99.66
3u7v_A 552 Beta-galactosidase; structural genomics, PSI-biolo 99.39
3d3a_A 612 Beta-galactosidase; protein structure initiative I 99.29
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 99.05
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 98.98
4e8d_A 595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 98.9
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 98.75
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 98.51
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 98.31
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.31
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 98.25
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 98.25
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.24
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 98.23
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 98.17
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 98.17
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 98.15
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 98.15
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 98.14
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 98.14
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 98.12
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 98.08
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 98.07
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 98.07
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 98.07
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 98.06
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 98.06
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 98.06
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 98.06
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 98.06
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 98.05
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.02
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 98.02
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 98.02
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 98.01
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 97.96
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 97.96
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 97.91
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 97.87
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 97.85
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 97.85
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.85
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.81
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 97.79
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 97.78
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 97.76
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 97.75
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.75
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 97.74
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 97.69
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 97.62
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.61
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 97.61
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 97.58
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.52
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 97.48
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.48
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.47
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 97.4
4atd_A513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 97.38
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 97.38
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 97.37
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.27
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.26
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 97.19
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 97.17
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 97.16
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 97.13
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.11
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 97.11
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 97.09
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.07
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 97.04
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 97.03
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 97.03
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 97.02
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 96.9
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 96.85
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 96.85
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 96.83
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 96.73
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 96.7
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 96.7
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 96.7
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 96.6
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 96.6
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 96.52
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 96.5
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 96.5
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 96.48
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 96.32
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 96.16
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 96.16
4a3y_A 540 Raucaffricine-O-beta-D-glucosidase; hydrolase, alk 96.16
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 96.11
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 95.95
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 95.46
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 95.4
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 95.38
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 95.35
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 95.25
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 94.79
1uwi_A489 Beta-galactosidase; hydrolase, beta-glycosidase, g 93.99
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 93.82
2bdq_A224 Copper homeostasis protein CUTC; alpha beta protei 93.76
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 93.64
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 93.52
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 93.3
4acy_A382 Endo-alpha-mannosidase; hydrolase, endomannosidase 92.2
1twd_A256 Copper homeostasis protein CUTC; TIM-like protein, 91.51
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 90.61
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 90.55
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 90.35
4ad1_A380 Glycosyl hydrolase family 71; glycoside hydrolase 90.33
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 89.59
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 88.4
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 87.52
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 87.22
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 86.95
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 86.9
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 86.7
1j93_A353 UROD, uroporphyrinogen decarboxylase; beta barrel, 86.39
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 86.22
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 86.07
1sfl_A238 3-dehydroquinate dehydratase; 3-dehydroquinase, en 85.48
3o1n_A276 3-dehydroquinate dehydratase; structural genomics, 85.07
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 84.58
3tva_A290 Xylose isomerase domain protein TIM barrel; struct 84.02
2e8y_A 718 AMYX protein, pullulanase; multiple domain, beta-a 82.96
2yr1_A257 3-dehydroquinate dehydratase; amino acid biosynthe 82.6
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 82.06
4h3d_A258 3-dehydroquinate dehydratase; structural genomics, 81.69
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 81.48
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 80.93
2inf_A359 URO-D, UPD, uroporphyrinogen decarboxylase; (alpha 80.56
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 80.54
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 80.36
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Back     alignment and structure
Probab=100.00  E-value=4.8e-165  Score=1286.03  Aligned_cols=401  Identities=51%  Similarity=0.959  Sum_probs=387.3

Q ss_pred             CCCCccEEEeeccceeeCCCcccChHHHHHHHHHHHHcCcceEEEeeeeeeeecCCCceecchhHHHHHHHHHHcCCcEE
Q 010415          107 GTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQ  186 (511)
Q Consensus       107 ~~~~vpvyVMLPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdvWWGiVE~~~p~~YdWs~Y~~l~~mvr~~GLKvq  186 (511)
                      .+++||||||||||+|+.+|+++++++++++|++||++||||||||||||+||+++|++|||++|++||+|||++|||||
T Consensus         8 ~~~~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq   87 (495)
T 1wdp_A            8 LLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQ   87 (495)
T ss_dssp             HTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred             cCCCccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEE
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeeccCCCCCCCccCCCChhHHhhhccCCCeeeecCCCCcccceeeeccCccccccCCchhHHHHHHHHHHHHHHhh
Q 010415          187 VVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNE  266 (511)
Q Consensus       187 vVmsFHqCGGNVGD~~~IpLP~WV~e~g~~~PDI~ftDr~G~rn~E~lSl~~D~~pvl~GRTpi~~Y~dfm~SF~~~f~~  266 (511)
                      ||||||||||||||+|+||||+||++++++||||+||||+|+||+||||||||++|||+||||+|+|+|||+|||++|++
T Consensus        88 ~vmSFHqCGgNVGD~~~IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~~  167 (495)
T 1wdp_A           88 AIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSD  167 (495)
T ss_dssp             EEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHH
T ss_pred             EEEEeeecCCCCCCcccccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCceEEEEEeecccCcccCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHHcCcccccCCC--------------
Q 010415          267 FFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP--------------  332 (511)
Q Consensus       267 ~~g~~~I~eI~VGLGPaGELRYPSyp~~~GW~~PGiGEFQCYDky~~~~lr~~a~~~G~~~Wg~gP--------------  332 (511)
                      |+.+++|+||+|||||||||||||||+.+||+||||||||||||||+++||++|+++||++||. |              
T Consensus       168 ~~~~~~I~eI~VGlGP~GELRYPSYp~~~gW~fPGiGEFQCYDky~~~~Lk~aA~~~G~~~WG~-P~dag~yn~~P~~t~  246 (495)
T 1wdp_A          168 FLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWEL-PDDAGKYNDVPESTG  246 (495)
T ss_dssp             HHHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCCS-CSSSCCTTCCGGGST
T ss_pred             hccCCeeEEEEeCccccccccCCCCccccCCCCCCcceeeechHHHHHHHHHHHHHhCchhhCC-CCCCCccCCCCCCCC
Confidence            9944899999999999999999999998999999999999999999999999999999999996 5              


Q ss_pred             -------------------------------------CCCC--ceeeeEeccccccCCCCCCHHHHHhcccCCCCCCChH
Q 010415          333 -------------------------------------AFEG--TCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYA  373 (511)
Q Consensus       333 -------------------------------------~F~~--v~l~~Kv~giHWwy~t~sHaAElTAGyYN~~~rDGY~  373 (511)
                                                           +|++  ++|++|||||||||+++|||||||||||||++||||+
T Consensus       247 FF~~~G~w~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~~~~v~l~~KV~GIHWwY~t~SHaAELTAGyYNt~~rdGY~  326 (495)
T 1wdp_A          247 FFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYR  326 (495)
T ss_dssp             TTSTTSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBCSSH
T ss_pred             CcCCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeceeeeccCCCCChHHhhcccccCCCCCchH
Confidence                                                 6886  6799999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCcEEEEeeccccccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccCcCCCcchHHHHHHhcCCC--
Q 010415          374 PIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPL--  451 (511)
Q Consensus       374 ~Ia~mf~kh~~~l~FTClEM~d~~~~~~~~~a~s~Pe~Lv~QV~~aA~~~Gv~vaGENAL~~~d~~~y~qI~~~a~~~--  451 (511)
                      ||++|||||||+|+|||+||+|++|++   +++|+||+||+||+++||++||+|+|||||+|||+++|+||++|++++  
T Consensus       327 ~Ia~m~~rh~~~l~fTC~EM~d~eq~~---~~~s~Pe~Lv~QV~~aa~~~Gv~~aGENAL~~~d~~a~~qI~~~~~~~~~  403 (495)
T 1wdp_A          327 PIARMLSRHHAILNFTCLEMRDSEQPS---DAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGV  403 (495)
T ss_dssp             HHHHHHHTTTCEEEECCTTCCGGGSCG---GGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHcCCeEEEEecCCCcCCCCc---ccCCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhccccc
Confidence            999999999999999999999999874   889999999999999999999999999999999999999999999875  


Q ss_pred             --CCCCCCcceeeEEeeCCccccCCcChhHHHHHHHHhccCCC--CCcccccCCCCcccccCCC
Q 010415          452 --NDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAV--PDLRVYTTEGNKEECSKNQ  511 (511)
Q Consensus       452 --~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~--~~~~~~~~~~~~~~~~~~~  511 (511)
                        +++++.++++||||||++.||+++||++|++|||+||++..  .+...|.|++.||++|++.
T Consensus       404 ~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~~~~~~~~~l~~~~~~  467 (495)
T 1wdp_A          404 NNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPK  467 (495)
T ss_dssp             CTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTCCCCCCCCCCCC
T ss_pred             cccCCccCceeeEEEecCChhhCCchhHHHHHHHHHHHhcCCCcCcCchhhcccccchhhcccc
Confidence              56777889999999999999999999999999999999875  5788999999999999863
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Back     alignment and structure
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B Back     alignment and structure
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A* Back     alignment and structure
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus} Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus} Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A* Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis} Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 511
d1fa2a_498 c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea b 0.0
d1b1ya_500 c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare 0.0
d1wdpa1490 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine m 0.0
d1vema2417 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus 1e-155
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 498 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: beta-Amylase
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

 Score =  614 bits (1586), Expect = 0.0
 Identities = 200/455 (43%), Positives = 264/455 (58%), Gaps = 60/455 (13%)

Query: 104 DFAGTPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTP 163
                 YV +YVMLPLG+++ +    D E + ++LK +K+   DGVMVD WWGI+EA  P
Sbjct: 6   VMPIGNYVSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGP 65

Query: 164 QVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFT 223
           + Y+WS YR LFQ+V++  LK+Q +MSFH+CGGNVGD V IP+PQW+++IG  NP+I++T
Sbjct: 66  KQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQWILQIGDKNPDIFYT 125

Query: 224 DREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPC 283
           +R G RN E L+ G+D +R+ +GRTA+E+Y D+M SFR    +F   G I +IEVG G  
Sbjct: 126 NRAGNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESFRDNMADFLKAGDIVDIEVGCGAA 185

Query: 284 GELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP----------- 332
           GELRYP+YP   GW +PGIGEFQCYDKY++    +A +  G+  W               
Sbjct: 186 GELRYPSYPETQGWVFPGIGEFQCYDKYMVADWKEAVKQAGNADWEMPGKGAGTYNDTPD 245

Query: 333 ----------------------------------------AFEGT--CISAKLSGIHWWY 350
                                                    F G    I+AK+SGIHWWY
Sbjct: 246 KTEFFRPNGTYKTDMGKFFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAAKVSGIHWWY 305

Query: 351 KTASHAAELTAGFYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPE 410
              SHAAELTAGFYN + RDGY PIA ML +H   LNFTC+E+R  +Q     EA + P+
Sbjct: 306 NHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQP---AEAKSAPQ 362

Query: 411 GLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKP----LNDPDGRHLSAFTYLR 466
            LV QVL++ W   I VA ENALP YD   YN++L   +P    LN P    +S  TYLR
Sbjct: 363 ELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLKLRPNGVNLNGPPKLKMSGLTYLR 422

Query: 467 LSPVLTDGHNFIEFERFVKRMHGEAVPDLRVYTTE 501
           LS  L    NF  F++FVK+MH +  P     +  
Sbjct: 423 LSDDLLQTDNFELFKKFVKKMHADLDPSPNAISPA 457
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 500 Back     information, alignment and structure
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Length = 490 Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
d1wdpa1490 beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} 100.0
d1b1ya_500 beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 100.0
d1fa2a_498 beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI 100.0
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 100.0
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.5
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 98.94
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.04
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 97.9
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 97.85
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 97.72
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 97.72
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 97.68
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 97.67
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 97.66
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 97.61
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.58
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 97.56
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 97.54
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 97.51
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.51
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 97.46
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 97.43
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 97.42
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.41
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 97.33
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 97.25
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 97.22
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 97.1
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 97.1
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.06
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 96.98
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 96.9
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 96.88
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 96.77
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 96.7
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.65
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 96.61
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 96.61
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 96.55
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 96.4
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 96.39
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.12
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 96.03
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 95.97
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 95.62
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 95.45
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 95.37
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 95.04
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 95.04
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 94.41
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 92.08
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 91.19
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 89.99
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 89.96
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 89.88
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 89.81
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 87.74
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 87.65
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 86.4
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 85.74
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 85.05
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 84.52
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 84.36
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 82.65
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 82.5
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 82.31
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 81.07
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 81.0
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 80.81
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: beta-Amylase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1e-170  Score=1322.29  Aligned_cols=400  Identities=52%  Similarity=0.964  Sum_probs=388.5

Q ss_pred             CCCccEEEeeccceeeCCCcccChHHHHHHHHHHHHcCcceEEEeeeeeeeecCCCceecchhHHHHHHHHHHcCCcEEE
Q 010415          108 TPYVPVYVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQV  187 (511)
Q Consensus       108 ~~~vpvyVMLPLd~V~~~~~~~~~~~~~~~L~~LK~~GVdGV~vdvWWGiVE~~~p~~YdWs~Y~~l~~mvr~~GLKvqv  187 (511)
                      .+|||||||||||+|+.+|+++|+++++++|++||++||||||||||||+||+++|++|||++|++||+|||++||||||
T Consensus         4 ~~yVpVyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsgY~~l~~mvr~~GLKlq~   83 (490)
T d1wdpa1           4 LNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQA   83 (490)
T ss_dssp             TTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred             cccccEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHHHHHHHHHHHHcCCeEEE
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeeccCCCCCCCccCCCChhHHhhhccCCCeeeecCCCCcccceeeeccCccccccCCchhHHHHHHHHHHHHHHhhh
Q 010415          188 VMSFHECGGNVGDDVHIPLPQWVMEIGQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEF  267 (511)
Q Consensus       188 VmsFHqCGGNVGD~~~IpLP~WV~e~g~~~PDI~ftDr~G~rn~E~lSl~~D~~pvl~GRTpi~~Y~dfm~SF~~~f~~~  267 (511)
                      |||||||||||||+|+||||+||+++|++|||||||||+|+||+||||||+|++|||+||||+|+|+|||+|||++|++|
T Consensus        84 vmSFHqCGGNvGD~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~  163 (490)
T d1wdpa1          84 IMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDF  163 (490)
T ss_dssp             EEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHH
T ss_pred             EEeecccCCCCCcccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCceEEEEEeecccCcccCCCCCCCCCCCccCCCcccccccHHHHHHHHHHHHHcCcccccCCC---------------
Q 010415          268 FVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLMKSLSKAAEARGHLFWARGP---------------  332 (511)
Q Consensus       268 ~g~~~I~eI~VGLGPaGELRYPSyp~~~GW~~PGiGEFQCYDky~~~~lr~~a~~~G~~~Wg~gP---------------  332 (511)
                      ++++||+||+|||||||||||||||+.+||+||||||||||||||+++||++|+++||++|| ||               
T Consensus       164 ~~~g~I~eI~VGlGP~GELRYPSYp~~~Gw~yPGiGEFQCYDky~~~~l~~aA~~~G~~~Wg-~P~dag~yn~~P~~t~F  242 (490)
T d1wdpa1         164 LESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWE-LPDDAGKYNDVPESTGF  242 (490)
T ss_dssp             HHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCC-SCSSSCCTTCCGGGSTT
T ss_pred             ccCCeEEEEEeccccCccccCCCCccccCCcCCCcceeeeCCHHHHHHHHHHHHHhCCcccC-CCCcCccCCCCCCCCCC
Confidence            98889999999999999999999999999999999999999999999999999999999998 45               


Q ss_pred             ------------------------------------CCCC--ceeeeEeccccccCCCCCCHHHHHhcccCCCCCCChHH
Q 010415          333 ------------------------------------AFEG--TCISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAP  374 (511)
Q Consensus       333 ------------------------------------~F~~--v~l~~Kv~giHWwy~t~sHaAElTAGyYN~~~rDGY~~  374 (511)
                                                          +|++  ++|++|||||||||+++|||||||||||||++||||+|
T Consensus       243 F~~~G~~~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rDGY~~  322 (490)
T d1wdpa1         243 FKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRP  322 (490)
T ss_dssp             TSTTSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBCSSHH
T ss_pred             CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecccCCCCCChHHHhccccCCCCCccHHH
Confidence                                                6875  57999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCcEEEEeeccccccCCCCCCCCCCCChHHHHHHHHHHHHhcCCeeeccccCcCCCcchHHHHHHhcCCC---
Q 010415          375 IAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPL---  451 (511)
Q Consensus       375 Ia~mf~kh~~~l~FTClEM~d~~~~~~~~~a~s~Pe~Lv~QV~~aA~~~Gv~vaGENAL~~~d~~~y~qI~~~a~~~---  451 (511)
                      ||+|||||+|+|+|||+||+|++|++   +++|+||+||+||+++||++||+|+|||||+|||+++|+||++|++++   
T Consensus       323 Ia~m~~rh~~~l~FTC~EM~d~eq~~---~a~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qI~~~~~~~~~~  399 (490)
T d1wdpa1         323 IARMLSRHHAILNFTCLEMRDSEQPS---DAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVN  399 (490)
T ss_dssp             HHHHHHTTTCEEEECCTTCCGGGSCG---GGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCCC
T ss_pred             HHHHHHHcCCeEEEecccccccCCCc---cccCCHHHHHHHHHHHHHHcCCceeeeccchhcCchHHHHHHHhcccccCc
Confidence            99999999999999999999999874   899999999999999999999999999999999999999999999986   


Q ss_pred             -CCCCCCcceeeEEeeCCccccCCcChhHHHHHHHHhccCCC--CCcccccCCCCcccccCCC
Q 010415          452 -NDPDGRHLSAFTYLRLSPVLTDGHNFIEFERFVKRMHGEAV--PDLRVYTTEGNKEECSKNQ  511 (511)
Q Consensus       452 -~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~--~~~~~~~~~~~~~~~~~~~  511 (511)
                       +++++.++++||||||++.||+++||++|++|||+||++..  +|.++|.|++.|||||+++
T Consensus       400 ~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~~pl~~s~~~  462 (490)
T d1wdpa1         400 NNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHAITPLKPSAPK  462 (490)
T ss_dssp             TTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTCCCCCCCCCCCC
T ss_pred             CCCCcccccceeeeecCCHhhcCcchHHHHHHHHHHhccCCCCCCChHHcCCccCccccCCCC
Confidence             45677889999999999999999999999999999999885  4789999999999999984
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure