Citrus Sinensis ID: 010425

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-
MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFSHN
ccccccccccEEEcccccccccccccHHHHHHHHHcccccccEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEccccccccHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccHHHHHHccccccccccccccccEEEEEcccccccccccEEEccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHHccccEEcccHHHHHHHHHcccccccccccccccEEccccccHHHHHHHHHHccccEEEEccccccccHHHHccccccccccccccccccccccccEEEEEcccccccccccccccEEEEcccccccccccHHHHHHcccccccccccccEEEcccccEEEEcccccHHcccccccccHHHHHHHHccccccEEEEcccccccccccEEEEEEEcccccccHHHHHHHHHHcccccccc
cccHHHHHHHHHEcccccccccccccHHHHHHHHHHHccccEEEEEcccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHcccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHcccEEEcccHHHHHHHHHcccccccccHHHHHHEcccccccHHHHHHHHHHccccEEEEcccccccccEEEEccccccccccccccccccEccccEEEEEccccccccccccEEEEEEEcccccccccccHHHHHHHEcccccEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHcc
MEAKQDHQEFIfrsklpdiyipnhlplhtYCFEnisqfadrpciingptgdvytyADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAsyigatsttanpfytppeIAKQAIASKAKIIITQAVYNdkvrdlsehhgarivtidpppenclhfSELITqadeneipavkinpddvvalpyssgttglpkgvmlTHKGLVTSVAQqvdgenpnlylhkedvILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKvtvapfvpPIVLAVAksgdvdkydmssIRTVmsgaapmgkELEDAVRAklphaklgqgygmteagPVLSMCLAFakepfeiksgacgtvvrnaemkivdpdtgislprnqageICIRGAQIMKGylndreatettidkegwlhtgdigyiddddeLFIVDRLKELIKFKGFQVAPAELEAMLIahpnisdaavvpmkdeaagevPVAFVVRsngskiteDEIKQYISKQVIFFSHN
MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGarivtidpppeNCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVtvapfvppIVLAVAksgdvdkyDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKivdpdtgislprnqAGEICIRGAQIMKGYLNDREATettidkegwlhtgdigyiddDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVrsngskitedeiKQYISKQVIFFSHN
MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEiakqaiaskakiiitqaVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFSHN
*********FIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIR********************LPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFF***
***********FRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFF***
********EFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFSHN
MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFSHN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFSHN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query511 2.2.26 [Sep-21-2011]
O24145547 4-coumarate--CoA ligase 1 N/A no 0.992 0.926 0.777 0.0
O24146542 4-coumarate--CoA ligase 2 N/A no 0.996 0.939 0.784 0.0
P31684545 4-coumarate--CoA ligase 1 N/A no 0.992 0.930 0.776 0.0
P31685545 4-coumarate--CoA ligase 2 N/A no 0.994 0.932 0.772 0.0
O24540553 4-coumarate--CoA ligase O N/A no 0.990 0.915 0.767 0.0
P14912544 4-coumarate--CoA ligase 1 N/A no 0.982 0.922 0.757 0.0
P14913544 4-coumarate--CoA ligase 1 N/A no 0.982 0.922 0.755 0.0
Q9S725556 4-coumarate--CoA ligase 2 yes no 0.992 0.911 0.713 0.0
Q42524561 4-coumarate--CoA ligase 1 no no 0.996 0.907 0.713 0.0
P41636537 4-coumarate--CoA ligase O N/A no 0.972 0.925 0.698 0.0
>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/509 (77%), Positives = 446/509 (87%), Gaps = 2/509 (0%)

Query: 2   EAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELT 61
           E KQ   + IFRSKLPDIYIP HLPLH+YCFENIS+F+ RPC+ING    +YTYA+VELT
Sbjct: 8   ETKQSG-DLIFRSKLPDIYIPKHLPLHSYCFENISEFSSRPCLINGANDQIYTYAEVELT 66

Query: 62  SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAI 121
            RKVA GL+KLG+Q+ D IM+LL N P+FVFAF+GASY+GA ST ANP +TP E+ KQA 
Sbjct: 67  CRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVKQAK 126

Query: 122 ASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINP 181
           AS AKIIITQ+ +  KV+D +  +  +++ ID  PE CLHFSEL TQ+DE+EIP VKI P
Sbjct: 127 ASSAKIIITQSCFVGKVKDYASENDVKVICIDSAPEGCLHFSEL-TQSDEHEIPEVKIQP 185

Query: 182 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYS 241
           DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN NLY+H EDV++CVLPLFHIYS
Sbjct: 186 DDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYS 245

Query: 242 LNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMS 301
           LNS+LLC LRVGAAILIMQKFDI   +EL+QKYKV++ PFVPPIVLA+AKS  VD YD+S
Sbjct: 246 LNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYDLS 305

Query: 302 SIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGAC 361
           S+RTVMSGAAP+GKELEDAVR K P+AKLGQGYGMTEAGPVL+MCLAFAKEPF+IKSGAC
Sbjct: 306 SVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGAC 365

Query: 362 GTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGD 421
           GTVVRNAEMKIVDPDTG SLPRNQ GEICIRG QIMKGYLND EAT  TIDKEGWLHTGD
Sbjct: 366 GTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGD 425

Query: 422 IGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPV 481
           IG+ID+DDELFIVDRLKELIK+KGFQVAPAE+EA+L+ HPNISDAAVVPMKDE AGEVPV
Sbjct: 426 IGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPV 485

Query: 482 AFVVRSNGSKITEDEIKQYISKQVIFFSH 510
           AFVVRSNGS ITEDE+K +ISKQVIF+  
Sbjct: 486 AFVVRSNGSAITEDEVKDFISKQVIFYKR 514

Nicotiana tabacum (taxid: 4097)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 2
>sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1 Back     alignment and function description
>sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1 Back     alignment and function description
>sp|P31685|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1 Back     alignment and function description
>sp|O24540|4CL_VANPL 4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1 Back     alignment and function description
>sp|P14912|4CL1_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1 Back     alignment and function description
>sp|P14913|4CL2_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S725|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2 Back     alignment and function description
>sp|Q42524|4CL1_ARATH 4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1 Back     alignment and function description
>sp|P41636|4CL_PINTA 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
224126051545 4-Coumarate:CoA ligase [Populus trichoca 0.996 0.933 0.841 0.0
2911799557 4-coumarate:CoA ligase 1 [Populus tricho 0.996 0.913 0.839 0.0
255584945557 AMP dependent CoA ligase, putative [Rici 0.984 0.903 0.839 0.0
224142261540 4-Coumarate:CoA ligase [Populus trichoca 0.994 0.940 0.835 0.0
2911797548 4-coumarate:CoA ligase 2 [Populus tricho 0.994 0.927 0.826 0.0
379061391545 4-coumarate: coenzyme A ligase 5 [Populu 0.996 0.933 0.845 0.0
379061389556 4-coumarate: coenzyme A ligase 4 [Populu 0.994 0.913 0.822 0.0
408777391544 4-coumarate:coenzyme A ligase [Punica gr 0.996 0.935 0.830 0.0
428135550547 4-coumarate:coenzyme A ligase 2 [Pyrus p 0.992 0.926 0.816 0.0
294516918547 p-coumarate:CoA-ligase 2 [Sorbus aucupar 0.992 0.926 0.812 0.0
>gi|224126051|ref|XP_002329649.1| 4-Coumarate:CoA ligase [Populus trichocarpa] gi|222870530|gb|EEF07661.1| 4-Coumarate:CoA ligase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/512 (84%), Positives = 476/512 (92%), Gaps = 3/512 (0%)

Query: 1   MEAKQDH-QEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVE 59
           MEA+ D  QEFIFRSKLPDI+IPNHLPLHTYCFEN+S+F D PC+INGPTG+++TYADVE
Sbjct: 1   MEAENDQAQEFIFRSKLPDIHIPNHLPLHTYCFENLSRFKDNPCLINGPTGEIHTYADVE 60

Query: 60  LTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119
           LTSRKVA+GL+KLG+++GDVI+LLLQN P+FVFAFLGAS IGA STTANPFYTP E+AKQ
Sbjct: 61  LTSRKVASGLNKLGIKQGDVILLLLQNSPEFVFAFLGASIIGAISTTANPFYTPAEVAKQ 120

Query: 120 AIASKAKIIITQAVYNDKVRD-LSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178
           A ASKAK+IITQAVY +KV+  + E+   +IVT+D PPEN LHFSEL T +DE++IPAV+
Sbjct: 121 ATASKAKLIITQAVYAEKVQQFVKENDHVKIVTVDSPPENYLHFSEL-TNSDEDDIPAVE 179

Query: 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFH 238
           INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H++DVILCVLPLFH
Sbjct: 180 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHEKDVILCVLPLFH 239

Query: 239 IYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY 298
           IYSLNSVLLC LRVG+AIL+MQKF+IV LMELVQKYKVT+APFVPP+VLAVAK   VDKY
Sbjct: 240 IYSLNSVLLCGLRVGSAILLMQKFEIVTLMELVQKYKVTIAPFVPPVVLAVAKCPVVDKY 299

Query: 299 DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS 358
           D+SSIRTVMSGAAPMGKELED VRAKLP+AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS
Sbjct: 300 DLSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS 359

Query: 359 GACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLH 418
           GACGTVVRNAEMKIVDPDTG SLPRNQAGEICIRG+QIMKGYLND EATE T+D +GWLH
Sbjct: 360 GACGTVVRNAEMKIVDPDTGRSLPRNQAGEICIRGSQIMKGYLNDPEATERTVDNDGWLH 419

Query: 419 TGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGE 478
           TGDIGYID DDELFIVDRLKELIK+KGFQVAPAELEAMLIAHP+ISD AVVPMKDEAAGE
Sbjct: 420 TGDIGYIDGDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPDISDCAVVPMKDEAAGE 479

Query: 479 VPVAFVVRSNGSKITEDEIKQYISKQVIFFSH 510
           VP+AFVVR+NGSKITEDEIKQYISKQV+F+  
Sbjct: 480 VPIAFVVRANGSKITEDEIKQYISKQVVFYKR 511

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|2911799|gb|AAC39366.1| 4-coumarate:CoA ligase 1 [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|255584945|ref|XP_002533186.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223527010|gb|EEF29200.1| AMP dependent CoA ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224142261|ref|XP_002324477.1| 4-Coumarate:CoA ligase [Populus trichocarpa] gi|222865911|gb|EEF03042.1| 4-Coumarate:CoA ligase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|2911797|gb|AAC39365.1| 4-coumarate:CoA ligase 2 [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|379061391|gb|AFC89541.1| 4-coumarate: coenzyme A ligase 5 [Populus tomentosa] Back     alignment and taxonomy information
>gi|379061389|gb|AFC89540.1| 4-coumarate: coenzyme A ligase 4 [Populus tomentosa] Back     alignment and taxonomy information
>gi|408777391|gb|AFU90743.1| 4-coumarate:coenzyme A ligase [Punica granatum] Back     alignment and taxonomy information
>gi|428135550|gb|AFY97682.1| 4-coumarate:coenzyme A ligase 2 [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|294516918|gb|ADE96996.1| p-coumarate:CoA-ligase 2 [Sorbus aucuparia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
TAIR|locus:2017602561 4CL1 "4-coumarate:CoA ligase 1 0.990 0.901 0.695 2.5e-191
TAIR|locus:2094716556 4CL2 "4-coumarate:CoA ligase 2 0.988 0.908 0.694 5.3e-191
TAIR|locus:2015003561 4CL3 "4-coumarate:CoA ligase 3 0.972 0.885 0.651 1.8e-174
TAIR|locus:2094771570 4CL5 "4-coumarate:CoA ligase 5 0.986 0.884 0.6 7.6e-167
TAIR|locus:2115673544 AT4G05160 [Arabidopsis thalian 0.972 0.913 0.399 3.4e-93
TAIR|locus:2015499542 ACOS5 "acyl-CoA synthetase 5" 0.982 0.926 0.358 2.8e-89
UNIPROTKB|Q5LVA1535 fadD "4-coumarate:CoA ligase" 0.951 0.908 0.385 9.9e-87
TIGR_CMR|SPO_0801535 SPO_0801 "4-coumarate:CoA liga 0.951 0.908 0.385 9.9e-87
DICTYBASE|DDB_G0284745551 4cl2 "4-coumarate-CoA ligase" 0.964 0.894 0.380 2.6e-86
DICTYBASE|DDB_G0284831551 4cl1 "4-coumarate-CoA ligase" 0.960 0.891 0.375 4.3e-86
TAIR|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1854 (657.7 bits), Expect = 2.5e-191, P = 2.5e-191
 Identities = 358/515 (69%), Positives = 419/515 (81%)

Query:     2 EAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELT 61
             ++  ++ + IFRSKLPDIYIPNHL LH Y F+NIS+FA +PC+INGPTG VYTY+DV + 
Sbjct:    15 QSNNNNSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVI 74

Query:    62 SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEXXXXXX 121
             SR++AA   KLGV + DV+MLLL NCP+FV +FL AS+ GAT+T ANPF+TP E      
Sbjct:    75 SRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAK 134

Query:   122 XXXXXXXXXXXVYNDKVRDLSEHHGARIVTID-----PPPENCLHFSELI---TQADENE 173
                         Y DK++ L    G  IV ID     P PE CL F+EL    T+A E  
Sbjct:   135 ASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASE-V 193

Query:   174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCV 233
             I +V+I+PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H +DVILCV
Sbjct:   194 IDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCV 253

Query:   234 LPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293
             LP+FHIY+LNS++LC LRVGAAILIM KF+I  L+EL+Q+ KVTVAP VPPIVLA+AKS 
Sbjct:   254 LPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSS 313

Query:   294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEP 353
             + +KYD+SSIR V SGAAP+GKELEDAV AK P+AKLGQGYGMTEAGPVL+M L FAKEP
Sbjct:   314 ETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEP 373

Query:   354 FEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDK 413
             F +KSGACGTVVRNAEMKIVDPDTG SL RNQ GEICIRG QIMKGYLN+  AT  TIDK
Sbjct:   374 FPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDK 433

Query:   414 EGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKD 473
             +GWLHTGDIG IDDDDELFIVDRLKELIK+KGFQVAPAELEA+LI HP+I+D AVV MK+
Sbjct:   434 DGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKE 493

Query:   474 EAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFF 508
             EAAGEVPVAFVV+S  S+++ED++KQ++SKQV+F+
Sbjct:   494 EAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFY 528
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009411 "response to UV" evidence=IEP
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0009620 "response to fungus" evidence=IEP
GO:0009698 "phenylpropanoid metabolic process" evidence=RCA;TAS
GO:0016207 "4-coumarate-CoA ligase activity" evidence=IDA
GO:0006598 "polyamine catabolic process" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA
GO:0005737 "cytoplasm" evidence=IDA
TAIR|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015003 4CL3 "4-coumarate:CoA ligase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094771 4CL5 "4-coumarate:CoA ligase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015499 ACOS5 "acyl-CoA synthetase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LVA1 fadD "4-coumarate:CoA ligase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0801 SPO_0801 "4-coumarate:CoA ligase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284745 4cl2 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284831 4cl1 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6ETN34CL3_ORYSJ6, ., 2, ., 1, ., 1, 20.6620.97450.8989yesno
P69452LCFA_ECOL66, ., 2, ., 1, ., 30.30890.89820.8181yesno
Q54P784CL2_DICDI6, ., 2, ., 1, ., 1, 20.38380.96470.8947yesno
P316854CL2_SOLTU6, ., 2, ., 1, ., 1, 20.77250.99410.9321N/Ano
P149134CL2_PETCR6, ., 2, ., 1, ., 1, 20.75540.98230.9227N/Ano
P149124CL1_PETCR6, ., 2, ., 1, ., 1, 20.75740.98230.9227N/Ano
P94547LCFA_BACSU6, ., 2, ., 1, ., 30.30070.91970.8392yesno
Q9S7254CL2_ARATH6, ., 2, ., 1, ., 1, 20.71340.99210.9118yesno
O241454CL1_TOBAC6, ., 2, ., 1, ., 1, 20.77790.99210.9268N/Ano
O241464CL2_TOBAC6, ., 2, ., 1, ., 1, 20.78430.99600.9391N/Ano
P416364CL_PINTA6, ., 2, ., 1, ., 1, 20.6980.97260.9255N/Ano
Q425244CL1_ARATH6, ., 2, ., 1, ., 1, 20.71310.99600.9073nono
O245404CL_VANPL6, ., 2, ., 1, ., 1, 20.76750.99020.9150N/Ano
P316844CL1_SOLTU6, ., 2, ., 1, ., 1, 20.77600.99210.9302N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.983
4th Layer6.2.1.120.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 0.0
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 0.0
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 0.0
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-144
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-141
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 1e-131
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-128
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 1e-120
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-119
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-118
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-114
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 1e-107
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-104
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 6e-95
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 7e-89
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 3e-87
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 3e-86
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 4e-85
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-83
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 2e-82
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 2e-81
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 6e-81
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 6e-80
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 6e-80
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 7e-80
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 2e-79
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 4e-78
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 1e-77
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-77
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 6e-77
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 7e-77
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 7e-75
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 5e-74
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 2e-73
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 2e-73
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 3e-73
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 5e-73
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 5e-73
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 5e-72
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 5e-69
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-68
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 8e-68
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 2e-66
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 2e-65
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 9e-65
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 2e-64
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 4e-63
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 1e-62
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 9e-62
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 1e-61
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 2e-61
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 8e-61
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 2e-60
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 3e-57
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 1e-56
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 3e-55
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 5e-55
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 7e-55
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 7e-55
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 1e-54
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 3e-54
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 4e-53
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 4e-53
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 2e-52
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 1e-51
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 2e-51
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 5e-51
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 3e-50
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 5e-49
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 6e-49
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 2e-48
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 5e-48
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 1e-46
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 2e-46
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 3e-46
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 4e-45
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 1e-44
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 5e-44
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 7e-44
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-43
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 3e-43
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 4e-43
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 7e-43
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 9e-43
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 1e-42
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 2e-42
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 6e-42
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 1e-41
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 2e-41
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 2e-41
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 6e-41
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 9e-40
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 5e-39
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 6e-39
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 9e-39
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 2e-38
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 3e-38
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 4e-38
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 8e-38
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 3e-37
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 8e-37
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 8e-36
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 2e-35
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 3e-35
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 4e-35
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 9e-35
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 1e-34
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-34
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 4e-34
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 1e-33
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 5e-33
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 6e-33
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 9e-33
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 1e-32
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 5e-31
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 9e-31
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 2e-30
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 2e-30
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 3e-30
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 5e-30
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 2e-28
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 7e-28
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 1e-27
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 3e-27
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-27
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 5e-27
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 2e-26
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 3e-26
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 3e-26
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-26
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 1e-25
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 2e-25
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 9e-25
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-24
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 5e-24
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 7e-24
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 1e-23
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 1e-23
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-23
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 3e-23
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 5e-23
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 6e-23
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 7e-23
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 4e-22
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 2e-21
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 3e-21
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 9e-21
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 4e-20
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 2e-19
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 3e-19
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 4e-19
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 2e-18
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 3e-18
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-18
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 5e-18
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 6e-18
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 7e-18
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 7e-18
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 2e-17
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 5e-17
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 9e-17
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-16
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 2e-16
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 3e-15
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 5e-15
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 8e-15
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 9e-12
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 2e-10
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 3e-10
cd05905556 cd05905, Dip2, Disco-interacting protein 2 (Dip2) 4e-10
COG1541438 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme 4e-09
TIGR03443 1389 TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh 2e-08
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 9e-08
PTZ00216 700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 2e-07
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 2e-07
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 5e-07
PLN03052728 PLN03052, PLN03052, acetate--CoA ligase; Provision 5e-07
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 2e-06
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 1e-05
PTZ00342 746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 3e-05
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information 
 Score = 1072 bits (2774), Expect = 0.0
 Identities = 404/506 (79%), Positives = 457/506 (90%), Gaps = 1/506 (0%)

Query: 3   AKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTS 62
                +EFIFRSKLPDIYIPNHLPLH YCFE +S+F+DRPC+I+G TG VYTYADVEL S
Sbjct: 1   EASASEEFIFRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLS 60

Query: 63  RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122
           R+VAAGL KLG+++GDV+MLLL NCP+FV AFLGAS  GA +TTANPFYTP EIAKQA A
Sbjct: 61  RRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKA 120

Query: 123 SKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182
           S AK+IITQ+ Y DK++ L+E  G  +VTID PPE CLHFSEL TQADENE+P V+I+PD
Sbjct: 121 SGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSEL-TQADENELPEVEISPD 179

Query: 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242
           DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H +DVILCVLP+FHIYSL
Sbjct: 180 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSL 239

Query: 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS 302
           NSVLLC LRVGAAILIM KF+I  L+EL+Q++KVT+APFVPPIVLA+AKS  V+KYD+SS
Sbjct: 240 NSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSS 299

Query: 303 IRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACG 362
           IR V+SGAAP+GKELEDA RAKLP+A LGQGYGMTEAGPVL+MCLAFAKEPF +KSG+CG
Sbjct: 300 IRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCG 359

Query: 363 TVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDI 422
           TVVRNAE+KIVDP+TG SLPRNQ GEICIRG QIMKGYLND EAT  TIDK+GWLHTGDI
Sbjct: 360 TVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDI 419

Query: 423 GYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVA 482
           GYIDDDDELFIVDRLKELIK+KGFQVAPAELEA+LI+HP+I+DAAVVPMKDE AGEVPVA
Sbjct: 420 GYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVA 479

Query: 483 FVVRSNGSKITEDEIKQYISKQVIFF 508
           FVVRSNGS+ITEDEIKQ+++KQV+F+
Sbjct: 480 FVVRSNGSEITEDEIKQFVAKQVVFY 505

Length = 537
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2) Back     alignment and domain information
>gnl|CDD|224458 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 511
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 100.0
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.97
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.96
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.95
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.83
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.8
PRK09188365 serine/threonine protein kinase; Provisional 99.56
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 99.49
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.88
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 98.6
PLN02249597 indole-3-acetic acid-amido synthetase 98.47
PLN02247606 indole-3-acetic acid-amido synthetase 98.35
PLN02620612 indole-3-acetic acid-amido synthetase 98.33
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 96.3
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 95.51
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 88.48
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 88.31
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 82.72
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 82.63
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 80.28
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.2e-75  Score=571.49  Aligned_cols=459  Identities=42%  Similarity=0.702  Sum_probs=405.0

Q ss_pred             cEEEeCCC-CCeeeHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEcCCChhHHHHHHHHHhhCCeEeccCCCCCHHHHHH
Q 010425           42 PCIINGPT-GDVYTYADVELTSRKVAAGLSKLG--VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAK  118 (511)
Q Consensus        42 ~a~~~~~~-~~~~Ty~~l~~~~~~la~~L~~~g--i~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~~~~~~~~~~~~~  118 (511)
                      +.++.... ++.+||+|+..++.++|.+|.++|  +++||+|++++||++++.++++||+.+|++..+++|.+.+.++.+
T Consensus        34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~  113 (537)
T KOG1176|consen   34 TSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAK  113 (537)
T ss_pred             ceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHH
Confidence            66665432 699999999999999999999865  899999999999999999999999999999999999999999999


Q ss_pred             HHHhcCceEEEEcccchHHHHHHhhhcCCeEEEeCCC--C---CC---ccc-hHHHHhhccCCCCCCcCCCCCCEEEEec
Q 010425          119 QAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPP--P---EN---CLH-FSELITQADENEIPAVKINPDDVVALPY  189 (511)
Q Consensus       119 ~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~  189 (511)
                      .++.++++++|++.+....+.+.......+++.+...  .   ..   ... +..+........  ......+|++.++|
T Consensus       114 ~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~  191 (537)
T KOG1176|consen  114 QLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILY  191 (537)
T ss_pred             HHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcc--cccCCCCCeEEEec
Confidence            9999999999999999999888776655565555432  0   00   011 222211111111  45667799999999


Q ss_pred             CCCCCCCchhhhhchHHHHHHHHhhhcCCCCCcccCCCcEEEEecchhhHHHhHHHHHHHHHhCcEEEEccCCCHHHHHH
Q 010425          190 SSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLME  269 (511)
Q Consensus       190 TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~  269 (511)
                      ||||||.||+|.+||+++..........    ..+...++.++.+|++|.+|+...+.+.+..|++++....++++.+++
T Consensus       192 SSGTTg~PKgV~lsHr~~~~~~~~~~~~----~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~  267 (537)
T KOG1176|consen  192 SSGTTGLPKGVVLSHRNLIANTLSIKIG----WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLD  267 (537)
T ss_pred             CCCCCCCCceEEEecHHHHHHHHHhhhc----ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHH
Confidence            9999999999999999998876655542    346668999999999999999766676888888888888899999999


Q ss_pred             HHHhccCceeecchHHHHHHHhcCCCCCCCCCcceeeeeeccCCCHHHHHHHHHHCCCCceeccccccCCCccccccccc
Q 010425          270 LVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAF  349 (511)
Q Consensus       270 ~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~Ge~l~~~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~  349 (511)
                      .|+++++|++.++|+++..|++.+.....+|++++.+.+||++++++..+++.+.+|...+.+.||+||+++.++.+...
T Consensus       268 ~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~  347 (537)
T KOG1176|consen  268 LIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWG  347 (537)
T ss_pred             HHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCC
Confidence            99999999999999999999999877778899999999999999999999999999779999999999999877765211


Q ss_pred             cCCCcccCCCcceeccCCceEEEEcCCCCCCCCCCCcceEEEecccchhhccCChhhhhhhcCCCCceecCceEEEcCCC
Q 010425          350 AKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYIDDDD  429 (511)
Q Consensus       350 ~~~~~~~~~~~~g~p~~~~~~~i~~~~~~~~~~~g~~Gei~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g  429 (511)
                      .   . ..++++|.+++++.+.+.+ ++|..++.++.||||++|+.++.||+++++.|++.|+.+|||+|||+|..|+||
T Consensus       348 ~---e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG  422 (537)
T KOG1176|consen  348 P---E-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDG  422 (537)
T ss_pred             c---c-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCC
Confidence            1   1 5789999999988888888 899999999999999999999999999999999999888999999999999999


Q ss_pred             cEEEEcccCceEEeCceeeChHHHHHHHhcCCCcceeEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcccCCC
Q 010425          430 ELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVIFFS  509 (511)
Q Consensus       430 ~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~  509 (511)
                      ++++.+|++|+||.+|.+|+|.|||.+|.+||.|.|++||+++|+.+|+.+.|+|+.+++..+++++++++++.+|++||
T Consensus       423 ~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~  502 (537)
T KOG1176|consen  423 YLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYK  502 (537)
T ss_pred             eEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CC
Q 010425          510 HN  511 (511)
Q Consensus       510 ~~  511 (511)
                      +.
T Consensus       503 ~~  504 (537)
T KOG1176|consen  503 LP  504 (537)
T ss_pred             cc
Confidence            63

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 0.0
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 0.0
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 7e-71
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 9e-71
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 1e-70
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 4e-69
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-67
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-67
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 3e-67
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 5e-67
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 4e-47
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 6e-45
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 7e-42
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 3e-37
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 2e-33
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 2e-33
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 5e-32
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 4e-31
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 3e-30
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 4e-30
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 4e-30
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 2e-28
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 1e-26
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 6e-24
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 9e-24
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 2e-23
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 1e-22
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 2e-22
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 4e-22
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 6e-22
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 2e-21
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 2e-21
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 3e-21
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 5e-21
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 6e-21
3rg2_A 617 Structure Of A Two-Domain Nrps Fusion Protein Conta 1e-20
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 1e-20
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 1e-20
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 2e-19
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 5e-19
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 9e-19
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 1e-18
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 1e-18
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 1e-18
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 1e-18
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 1e-18
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 5e-17
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 1e-16
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 3e-16
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 3e-16
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 1e-15
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 2e-11
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 7e-09
3t5a_A480 Crystal Structure Of N-Terminal Domain Of Faal28 G3 9e-09
3e53_A480 Crystal Structure Of N-Terminal Domain Of A Fatty A 2e-08
4dg8_A 620 Structure Of Pa1221, An Nrps Protein Containing Ade 4e-08
4gr4_A469 Crystal Structure Of Slgn1deltaasub Length = 469 5e-07
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/504 (71%), Positives = 421/504 (83%), Gaps = 1/504 (0%)
Query: 7   HQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVA 66
            +EFIFRSKLPDIYIP +LPLH+Y  EN+S  + +PC+ING  GDVYTYADVELT+R+VA
Sbjct: 4   QEEFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVA 63
Query: 67  AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEXXXXXXXXXXX 126
           +GL+K+G+Q+GDVIML L + P+FV AFLGAS+ GA  T ANPF TP E           
Sbjct: 64  SGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAK 123
Query: 127 XXXXXXVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVA 186
                  Y +KV+D +     +++ +D  P+ CLHFSEL TQADENE P V I+PDDVVA
Sbjct: 124 LLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSEL-TQADENEAPQVDISPDDVVA 182
Query: 187 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVL 246
           LPYSSGTTGLPKGVMLTHKGL+TSVAQQVDG+NPNLY H EDVILCVLP+FHIY+LNS++
Sbjct: 183 LPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIM 242
Query: 247 LCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTV 306
           LC LRVGA ILIM KF+I  L+ L++KYKV++AP VPP+++++AKS D+DK+D+SS+R +
Sbjct: 243 LCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMI 302
Query: 307 MSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVR 366
            SG AP+GKELED VRAK P A+LGQGYGMTEAGPVL+MCLAFAKEPF+IK GACGTVVR
Sbjct: 303 KSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVR 362
Query: 367 NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYID 426
           NAEMKIVDP+TG SLPRNQ GEICIRG QIMKGYLND EAT  TIDKEGWLHTGDIGYID
Sbjct: 363 NAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYID 422
Query: 427 DDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVR 486
           DDDELFIVDRLKELIK+KGFQVAPAELEA+LIAHP ISDAAVV +KDE AGEVPVAFVV+
Sbjct: 423 DDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVK 482
Query: 487 SNGSKITEDEIKQYISKQVIFFSH 510
           S  S+ TEDEIKQYISKQVIF+  
Sbjct: 483 SEKSQATEDEIKQYISKQVIFYKR 506
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3T5A|A Chain A, Crystal Structure Of N-Terminal Domain Of Faal28 G330w Mutant From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure
>pdb|3E53|A Chain A, Crystal Structure Of N-Terminal Domain Of A Fatty Acyl Amp Ligase Faal28 From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure
>pdb|4GR4|A Chain A, Crystal Structure Of Slgn1deltaasub Length = 469 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 0.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 0.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 0.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 0.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 0.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-158
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-149
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-146
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-143
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-141
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-139
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-139
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-138
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-135
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-133
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 2e-93
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 9e-91
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-79
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 2e-72
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 4e-72
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 2e-66
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-35
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 5e-35
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 8e-34
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-33
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 3e-32
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 4e-30
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 5e-30
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 8e-27
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 3e-21
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 2e-19
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 7e-12
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 2e-11
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 5e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
 Score =  793 bits (2050), Expect = 0.0
 Identities = 372/502 (74%), Positives = 435/502 (86%), Gaps = 1/502 (0%)

Query: 7   HQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVA 66
            +EFIFRSKLPDIYIP +LPLH+Y  EN+S  + +PC+ING  GDVYTYADVELT+R+VA
Sbjct: 4   QEEFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVA 63

Query: 67  AGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAK 126
           +GL+K+G+Q+GDVIML L + P+FV AFLGAS+ GA  T ANPF TP E+AK A AS+AK
Sbjct: 64  SGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAK 123

Query: 127 IIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVA 186
           ++ITQA Y +KV+D +     +++ +D  P+ CLHFSEL  QADENE P V I+PDDVVA
Sbjct: 124 LLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELT-QADENEAPQVDISPDDVVA 182

Query: 187 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVL 246
           LPYSSGTTGLPKGVMLTHKGL+TSVAQQVDG+NPNLY H EDVILCVLP+FHIY+LNS++
Sbjct: 183 LPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIM 242

Query: 247 LCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTV 306
           LC LRVGA ILIM KF+I  L+ L++KYKV++AP VPP+++++AKS D+DK+D+SS+R +
Sbjct: 243 LCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMI 302

Query: 307 MSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVR 366
            SG AP+GKELED VRAK P A+LGQGYGMTEAGPVL+MCLAFAKEPF+IK GACGTVVR
Sbjct: 303 KSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVR 362

Query: 367 NAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREATETTIDKEGWLHTGDIGYID 426
           NAEMKIVDP+TG SLPRNQ GEICIRG QIMKGYLND EAT  TIDKEGWLHTGDIGYID
Sbjct: 363 NAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYID 422

Query: 427 DDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVR 486
           DDDELFIVDRLKELIK+KGFQVAPAELEA+LIAHP ISDAAVV +KDE AGEVPVAFVV+
Sbjct: 423 DDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVK 482

Query: 487 SNGSKITEDEIKQYISKQVIFF 508
           S  S+ TEDEIKQYISKQVIF+
Sbjct: 483 SEKSQATEDEIKQYISKQVIFY 504
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3rg2_A 617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.98
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 99.07
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 99.06
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.02
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 98.96
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.93
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 94.33
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 93.76
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 93.75
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 86.52
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 85.91
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 84.04
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 83.39
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 82.93
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 82.1
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 81.81
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 80.75
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-82  Score=650.63  Aligned_cols=503  Identities=74%  Similarity=1.202  Sum_probs=458.6

Q ss_pred             ccceEEEcCCCCCCCCCCCCHhhHHhhhcccCCCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcCC
Q 010425            7 HQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQN   86 (511)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~gi~~g~~V~i~~~~   86 (511)
                      +.+.++.++.++.+.|..+|+.++|.++++++|+++|+++.+.++++||+||+++++++|++|++.|+++||+|+++++|
T Consensus         4 ~~~~i~~~~~~~~~~p~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~   83 (536)
T 3ni2_A            4 QEEFIFRSKLPDIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPS   83 (536)
T ss_dssp             -CCCCBCCSSCCCCCCSSCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCS
T ss_pred             ccceEEecCCCCCCCCCCCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence            45678999999999998899999999999999999999987667999999999999999999999999999999999999


Q ss_pred             ChhHHHHHHHHHhhCCeEeccCCCCCHHHHHHHHHhcCceEEEEcccchHHHHHHhhhcCCeEEEeCCCCCCccchHHHH
Q 010425           87 CPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELI  166 (511)
Q Consensus        87 ~~~~~~~~lA~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  166 (511)
                      ++++++++|||+++|++++|++|.++.+++.++++.++++++|++....+.+.+.......+++.++........++++.
T Consensus        84 ~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (536)
T 3ni2_A           84 SPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGCLHFSELT  163 (536)
T ss_dssp             SHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTCEETHHHH
T ss_pred             cHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCccCHHHHh
Confidence            99999999999999999999999999999999999999999999998888887776666777777776555666676663


Q ss_pred             hhccCCCCCCcCCCCCCEEEEecCCCCCCCchhhhhchHHHHHHHHhhhcCCCCCcccCCCcEEEEecchhhHHHhHHHH
Q 010425          167 TQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVL  246 (511)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~  246 (511)
                      .. .....+....+++++++++|||||||.||+|.++|+++.+.+..........+++.+++++++.+|++|.+++...+
T Consensus       164 ~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~  242 (536)
T 3ni2_A          164 QA-DENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIM  242 (536)
T ss_dssp             TS-CGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTH
T ss_pred             hc-cccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHH
Confidence            32 22233445678899999999999999999999999999988877666555456788999999999999999997778


Q ss_pred             HHHHHhCcEEEEccCCCHHHHHHHHHhccCceeecchHHHHHHHhcCCCCCCCCCcceeeeeeccCCCHHHHHHHHHHCC
Q 010425          247 LCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLP  326 (511)
Q Consensus       247 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~Ge~l~~~~~~~~~~~~~  326 (511)
                      +.++..|+++++.+.+++..+++.|+++++|++.++|+++..+++........++++|.+++|||++++++.+++++.||
T Consensus       243 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~  322 (536)
T 3ni2_A          243 LCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFP  322 (536)
T ss_dssp             HHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCT
T ss_pred             HHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCC
Confidence            89999999999999999999999999999999999999999999987777778899999999999999999999999999


Q ss_pred             CCceeccccccCCCccccccccccCCCcccCCCcceeccCCceEEEEcCCCCCCCCCCCcceEEEecccchhhccCChhh
Q 010425          327 HAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGYLNDREA  406 (511)
Q Consensus       327 ~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~~~~~~~~~~~g~~Gei~v~~~~~~~gy~~~~~~  406 (511)
                      ++++++.||+||++.+++.+............+++|+|+++++++|+|++++.+++.|+.|||+++|++++.||+++++.
T Consensus       323 ~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~  402 (536)
T 3ni2_A          323 QARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEA  402 (536)
T ss_dssp             TSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHH
T ss_pred             CCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhH
Confidence            99999999999999877766444444455677899999999999999998999999999999999999999999999999


Q ss_pred             hhhhcCCCCceecCceEEEcCCCcEEEEcccCceEEeCceeeChHHHHHHHhcCCCcceeEEEeeeCCCCCceEEEEEEe
Q 010425          407 TETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVR  486 (511)
Q Consensus       407 ~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~  486 (511)
                      +...|+.++||+|||+|++++||.++++||+||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.++++|+.
T Consensus       403 t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~  482 (536)
T 3ni2_A          403 TSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVK  482 (536)
T ss_dssp             HHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             HHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCCCCceeEEEEEe
Confidence            99999899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHhcccCCCC
Q 010425          487 SNGSKITEDEIKQYISKQVIFFSH  510 (511)
Q Consensus       487 ~~~~~~~~~~l~~~l~~~l~~~~~  510 (511)
                      .++...+.++|+++++++||+||+
T Consensus       483 ~~~~~~~~~~l~~~l~~~l~~~~~  506 (536)
T 3ni2_A          483 SEKSQATEDEIKQYISKQVIFYKR  506 (536)
T ss_dssp             CTTCCCCHHHHHHHHHTTSCGGGC
T ss_pred             cCCCCCCHHHHHHHHHHhccCCcc
Confidence            988888999999999999999986
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 511
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-119
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-104
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-103
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 2e-98
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 1e-83
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 8e-76
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 7e-75
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  361 bits (928), Expect = e-119
 Identities = 106/510 (20%), Positives = 212/510 (41%), Gaps = 45/510 (8%)

Query: 34  NISQFADRPCII----NGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQ 89
           ++ +  DR  II    +       +Y ++     + A  L  LG++KGDV+ + +   P+
Sbjct: 81  HLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPE 140

Query: 90  FVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQ-------------AVYND 136
              A L  + IGA  +     ++P  +A   I S ++++IT                 +D
Sbjct: 141 AAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDD 200

Query: 137 KVRDLSEHHGARIVTID------PPPENCLHFSELITQADENEIPAVKINPDDVVALPYS 190
            +++ +      ++ +          E    +   + +    E     +N +D + + Y+
Sbjct: 201 ALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYT 260

Query: 191 SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCAL 250
           SG+TG PKGV+ T  G +   A            H  D+  C   +  +   + +L   L
Sbjct: 261 SGSTGKPKGVLHTTGGYLVYAATTFK---YVFDYHPGDIYWCTADVGWVTGHSYLLYGPL 317

Query: 251 RVGAAILIMQK----FDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGD--VDKYDMSSIR 304
             GA  L+ +         ++ ++V K++V +    P  + A+   GD  ++  D SS+R
Sbjct: 318 ACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLR 377

Query: 305 TVMSGAAPMGKELEDAVRAKL--PHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACG 362
            + S   P+  E  +    K+      +   +  TE G  +   L       E+K+G+  
Sbjct: 378 ILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLP---GAIELKAGSAT 434

Query: 363 TVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQ--IMKGYLNDREATETTIDK--EGWLH 418
                 +  +VD + G        G + I  +     +    D E  E T     +    
Sbjct: 435 RPFFGVQPALVDNE-GHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYF 493

Query: 419 TGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGE 478
           +GD    D+D   +I  R+ +++   G ++  AE+E+ L+AHP I++AAVV +     G+
Sbjct: 494 SGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQ 553

Query: 479 VPVAFVVRSNGSKITED---EIKQYISKQV 505
              A+V  ++G + + +   E++ ++ K++
Sbjct: 554 AIYAYVTLNHGEEPSPELYAEVRNWVRKEI 583
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 85.67
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 85.26
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 85.11
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 84.56
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 84.39
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 83.23
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Luciferase
species: Firefly (Photinus pyralis) [TaxId: 7054]

Probab=100.00  E-value=2.6e-71  Score=567.86  Aligned_cols=492  Identities=33%  Similarity=0.531  Sum_probs=417.8

Q ss_pred             EEEcCCCCCCCCCCCCHhhHHhhhcccC---CCCcEEEeCCCCCeeeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcCCC
Q 010425           11 IFRSKLPDIYIPNHLPLHTYCFENISQF---ADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNC   87 (511)
Q Consensus        11 ~~~~~~~~~~~~~~~t~~~~l~~~~~~~---p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~gi~~g~~V~i~~~~~   87 (511)
                      +-++..|..|+++ .|+.+.|.+.++++   |+++|+.+...++++||+||+++++++|++|+++|+++||+|+++++|+
T Consensus         4 ~~~~p~p~~p~~~-~t~~~~l~~~~~~~~~~P~~~a~~d~~~~~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns   82 (541)
T d1lcia_           4 IKKGPAPFYPLED-GTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENS   82 (541)
T ss_dssp             SEECCCCSSCCCS-SCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSC
T ss_pred             CCcCCCCCCCCCC-CCHHHHHHHHHHhhCCCCCeEEEEeCCCCeEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCC
Confidence            4455667777777 79999999888877   8888999887778999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhCCeEeccCCCCCHHHHHHHHHhcCceEEEEcccchHHHHHHhhhcC-C-eEEEeCCC--CCCccchH
Q 010425           88 PQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHG-A-RIVTIDPP--PENCLHFS  163 (511)
Q Consensus        88 ~~~~~~~lA~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~-~~i~~~~~--~~~~~~~~  163 (511)
                      +++++++|||+++|++++|+++.++.+++.++++.++++++|++++..+.+.+...... . .++.++..  ......+.
T Consensus        83 ~e~~v~~lA~~~~G~i~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (541)
T d1lcia_          83 LQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMY  162 (541)
T ss_dssp             SSTHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBEEHH
T ss_pred             HHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccccccchhh
Confidence            99999999999999999999999999999999999999999999998888888776663 3 34444432  22333333


Q ss_pred             HHHhhc------cCCCCCCcCCCCCCEEEEecCCCCCCCchhhhhchHHHHHHHHhhhcCCCCCcccCCCcEEEEecchh
Q 010425          164 ELITQA------DENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLF  237 (511)
Q Consensus       164 ~~~~~~------~~~~~~~~~~~~~~~~~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  237 (511)
                      ......      .....+.....++++++++|||||||.||+|.++|.++............ ...+.+.+++++.+|++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~  241 (541)
T d1lcia_         163 TFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIF-GNQIIPDTAILSVVPFH  241 (541)
T ss_dssp             HHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTT-SCCCCTTCEEEECSCTT
T ss_pred             hhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhcc-ccccccccccccccccc
Confidence            332221      11222344456789999999999999999999999999877666554333 34578899999999999


Q ss_pred             hHHHhHHHHHHHHHhCcEEEEccCCCHHHHHHHHHhccCceeecchHHHHHHHhcCCCCCCCCCcceeeeeeccCCCHHH
Q 010425          238 HIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKEL  317 (511)
Q Consensus       238 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l~~i~~~Ge~l~~~~  317 (511)
                      |..++ ...+..+..++..+.....+.......+..+++|.+..+|..+..+++........+++++.+++||++++++.
T Consensus       242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~v~~gG~~~~~~~  320 (541)
T d1lcia_         242 HGFGM-FTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEV  320 (541)
T ss_dssp             SHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEECCHHHHHHHHHCSCGGGSCCTTCCEEECTTCCCCHHH
T ss_pred             ccccc-cccccccccccccccccccccchhHHHHhhhhccccccCccccccccccccccccccccceEEEeccccccccc
Confidence            99888 66667777888888888889999999999999999999999999999988887888899999999999999999


Q ss_pred             HHHHHHHCCCCceeccccccCCCccccccccccCCCcccCCCcceeccCCceEEEEcCCCCCCCCCCCcceEEEecccch
Q 010425          318 EDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIM  397 (511)
Q Consensus       318 ~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~i~~~~~~~~~~~g~~Gei~v~~~~~~  397 (511)
                      .+++.+.++...+++.||+||+++.++..     .......+++|+|+++++++|+|++++++++.|+.|||+|+|++++
T Consensus       321 ~~~~~~~~~~~~~~~~YG~TE~~~~~~~~-----~~~~~~~~svG~p~~~~~~~i~d~d~~~~~~~g~~Gel~v~g~~~~  395 (541)
T d1lcia_         321 GEAVAKRFHLPGIRQGYGLTETTSAILIT-----PEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIM  395 (541)
T ss_dssp             HHHHHHHTTCSCCBCEECCGGGSSCSEEC-----CCC---CCCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSC
T ss_pred             ccccccccCCceeeecCCccccCceEEec-----CcccCCCCccccccCCCEEEEEECCCCcCCCCCCeEEEEEccCccC
Confidence            99999999667899999999999776653     2334566789999999999999999999999999999999999999


Q ss_pred             hhccCChhhhhhhcCCCCceecCceEEEcCCCcEEEEcccCceEEeCceeeChHHHHHHHhcCCCcceeEEEeeeCCCCC
Q 010425          398 KGYLNDREATETTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKFKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAG  477 (511)
Q Consensus       398 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~~  477 (511)
                      .||++++..+...+..++||+|||+|+++++|.+++.||.+|+||++|++|+|.+||++|.++|+|.||+|++++++..+
T Consensus       396 ~gY~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g  475 (541)
T d1lcia_         396 SGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAG  475 (541)
T ss_dssp             SEETTBHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC-----CEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTE
T ss_pred             CeeCCChhhhhhcccCCccccCCCeeEEcCCeEEEEeeeecCEEEECCEEECHHHHHHHHHhCCCccEEEEEEEECCCCC
Confidence            99999999998888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEeCCCCCCCHHHHHHHHHhcccCCCC
Q 010425          478 EVPVAFVVRSNGSKITEDEIKQYISKQVIFFSH  510 (511)
Q Consensus       478 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~  510 (511)
                      ++++++|++.++...+.++|+++|+++|++|++
T Consensus       476 ~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~  508 (541)
T d1lcia_         476 ELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKK  508 (541)
T ss_dssp             EEEEEEEEECTTCCCCHHHHHHHHHHHSCGGGS
T ss_pred             EEEEEEEEECCCCCCCHHHHHHHHHHhCCcccc
Confidence            999999999988889999999999999998753
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure