Citrus Sinensis ID: 010495

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MYSNQELMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSVEKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPLESVPMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGPESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTRKPNQAKACDANSVTEVKYLGF
ccccccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccccccccccEEccccccccccccccccccccccccccEEEEEcccccEEEEEccccccccEEEEcccEEccHHHHHHHHHHHHHcccccEEEEEEcccEEEEcccccccccccccccccccEEEEEEEccEEEEEEEEccccccccEEEEEcccccccccccEEcccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
cccccccccccccHcccccccccccEEEEcEEcccEEEccccccccEEcccccccccccccccHHHHHHHHHcccccccccccccccccEEEcccccEEEEEEcccccEEEEccccccccEEEEEccEEccHHHHHHHHHHHHHccccEEEEEEEcccEEEEcccccccHHEEcccccccccEEEEEEccEEEEEEEEEEccccccEEEEEEEEEEcccccEEEEcccccccEEEccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccEcccccccccccccccccEEEccccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHcccccccccccHEEEccc
mysnqelmplfpsenlqceefpsyqhiyqneflsrkhkkqkeeDIAICVcrvdpnnlesscgerclnvltstectpgycpcgvfcknqrfqkcqyaktklvktegrgwglladENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDAtvkgsharfinhscqpncetrkwnvlgeirvgifakqdipvgtelaydynfewyggtkvrclcgaatcsgflgaksrgfqedtylweddderysvekiplydsaedepsltlfktveatkteyvvdgkeeysmgmnvsvkpenhldstslvvqplesvpmegVVVNAIKieeseetklypqdtqqQVFSQNNAMISRIRsnsacrnyhigpesmpkkrsqlksngKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNdirpaieeherdsqdsVATSVAEKWIEACCTKLKTEFDLYSSIIknvactptrkpnqakacdansvtevkylgf
mysnqelmplfpSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARfinhscqpncetRKWNVLGEIRVGifakqdipvGTELAYDYNFEWYGGTKVRCLCGAATCSgflgaksrgfQEDTylweddderysVEKIplydsaedepsltlfktveatkteyvvdgkeeYSMGMNVSVKPENHLDSTSLVVQPLESVPMEGVVVNAIKIEESeetklypqdtqqQVFSQNNAMISRIRSNSACRNYHIgpesmpkkrsQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVactptrkpnqakacdansvtevkylgf
MYSNQELMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSVEKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPLESVPMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGPESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTRKPNQAKACDANSVTEVKYLGF
****************QCEEFPSYQHIYQNEFLS********EDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSVEKIPLYDS*****SLTLFKTVEATKTEYVVDGK*********************LVVQPLESVPMEGVVVNAIKI***************************************************************HVDAKHVCQLLAFK*******************************************TSVAEKWIEACCTKLKTEFDLYSSIIKNVACTP***********************
******************EEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLG************************************************************************************************************************************************************************************************QLASLYNDIRP**************TSVAEKWIEACCTKLKTEFDLYSSIIKNVA********************VKYLGF
MYSNQELMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSVEKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPLESVPMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGPESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIRPAIEE************VAEKWIEACCTKLKTEFDLYSSIIKNVACTPTR*********ANSVTEVKYLGF
******LMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDD*********************************************************************PMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISR**SNSAC**************************AQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTRKP*QA****ANSVTEVKYLGF
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MYSNQELMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSVEKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPLESVPMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGPESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAxxxxxxxxxxxxxxxxxxxxxLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTRKPNQAKACDANSVTEVKYLGF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query509 2.2.26 [Sep-21-2011]
Q84WW6492 Histone-lysine N-methyltr yes no 0.929 0.961 0.635 1e-179
Q2LAE1 1759 Histone-lysine N-methyltr no no 0.451 0.130 0.418 1e-51
Q9BYW2 2564 Histone-lysine N-methyltr yes no 0.424 0.084 0.412 2e-49
O960281365 Histone-lysine N-methyltr no no 0.424 0.158 0.436 7e-48
Q8BVE81365 Histone-lysine N-methyltr no no 0.424 0.158 0.432 2e-47
O88491 2588 Histone-lysine N-methyltr no no 0.424 0.083 0.427 4e-47
O14026 798 Histone-lysine N-methyltr yes no 0.428 0.273 0.420 2e-46
Q96L73 2696 Histone-lysine N-methyltr no no 0.424 0.080 0.423 3e-46
Q9BZ951437 Histone-lysine N-methyltr no no 0.422 0.149 0.412 1e-45
Q6P2L61439 Histone-lysine N-methyltr no no 0.426 0.150 0.420 2e-45
>sp|Q84WW6|ASHH1_ARATH Histone-lysine N-methyltransferase ASHH1 OS=Arabidopsis thaliana GN=ASHH1 PE=2 SV=1 Back     alignment and function desciption
 Score =  627 bits (1617), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/494 (63%), Positives = 380/494 (76%), Gaps = 21/494 (4%)

Query: 19  EEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGY 78
           +E P Y+HIYQN+F  RKHKKQKEEDI+IC C+ D  + +S+CGERCLNV+T+TECTPGY
Sbjct: 12  DELPQYEHIYQNDFSYRKHKKQKEEDISICECKFDFGDPDSACGERCLNVITNTECTPGY 71

Query: 79  CPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRR 138
           CPCGV+CKNQ+FQKC+YAKTKL+K EGRGWGL+A E IKAGQFI+EYCGEVISWKEA++R
Sbjct: 72  CPCGVYCKNQKFQKCEYAKTKLIKCEGRGWGLVALEEIKAGQFIMEYCGEVISWKEAKKR 131

Query: 139 SQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFA 198
           +Q YET G+KDAYII LNA E+IDAT KGS ARFINHSC+PNCETRKWNVLGE+RVGIFA
Sbjct: 132 AQTYETHGVKDAYIISLNASEAIDATKKGSLARFINHSCRPNCETRKWNVLGEVRVGIFA 191

Query: 199 KQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSV 258
           K+ I   TELAYDYNFEWYGG KVRCLCGA  CSGFLGAKSRGFQEDTY+WED D+RYSV
Sbjct: 192 KESISPRTELAYDYNFEWYGGAKVRCLCGAVACSGFLGAKSRGFQEDTYVWEDGDDRYSV 251

Query: 259 EKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPL 318
           +KIP+YDSAEDE +    K  E+   E     KE+        +  ENHL+ST+L +Q  
Sbjct: 252 DKIPVYDSAEDELTSEPSKNGESNTNEE----KEK-------DISTENHLESTALNIQQQ 300

Query: 319 ES---VPM-EGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGP 374
                 PM E VV   +K E SE+ KL  Q++Q+   S   A++SR+  N +     I  
Sbjct: 301 SDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQEDS-SPKTAIVSRVHGNIS----KIKS 355

Query: 375 ESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLY 434
           ES+PKKR +  S GK K++AQKHVD  +V QLLA KEAQ+EVL+ EE+K EA+ +L+SLY
Sbjct: 356 ESLPKKRGRPFSGGKTKNVAQKHVDIANVVQLLATKEAQDEVLKYEEVKKEAAVRLSSLY 415

Query: 435 NDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTR-KPNQA 493
           ++IRPAIEEHERDSQDSVATSVAEKWI+A C KLK EFDLYSS+IKN+A TP + +  + 
Sbjct: 416 DEIRPAIEEHERDSQDSVATSVAEKWIQASCNKLKAEFDLYSSVIKNIASTPIKPQDTKT 475

Query: 494 KACDANSVTEVKYL 507
           K  +A +   +K L
Sbjct: 476 KVAEAGNEDHIKLL 489
Histone methyltransferase.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3
>sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 PE=1 SV=1 Back     alignment and function description
>sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2 PE=1 SV=3 Back     alignment and function description
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1 Back     alignment and function description
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1 SV=2 Back     alignment and function description
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Mus musculus GN=Nsd1 PE=1 SV=1 Back     alignment and function description
>sp|O14026|SET2_SCHPO Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set2 PE=1 SV=1 Back     alignment and function description
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Homo sapiens GN=NSD1 PE=1 SV=1 Back     alignment and function description
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1 PE=1 SV=1 Back     alignment and function description
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query509
224082490495 SET domain protein [Populus trichocarpa] 0.960 0.987 0.729 0.0
255575537495 set domain protein, putative [Ricinus co 0.950 0.977 0.716 0.0
342209884481 ASH1-like protein [Phaseolus vulgaris] 0.929 0.983 0.681 0.0
449446403497 PREDICTED: histone-lysine N-methyltransf 0.956 0.979 0.684 0.0
359493199515 PREDICTED: histone-lysine N-methyltransf 0.960 0.949 0.655 0.0
356576073480 PREDICTED: histone-lysine N-methyltransf 0.935 0.991 0.678 0.0
356535766480 PREDICTED: histone-lysine N-methyltransf 0.927 0.983 0.665 0.0
357443463 616 Histone-lysine N-methyltransferase NSD3 0.915 0.756 0.658 0.0
357443507479 hypothetical protein MTR_1g098000 [Medic 0.915 0.972 0.658 0.0
22330671492 histone-lysine N-methyltransferase ASHH1 0.929 0.961 0.635 1e-177
>gi|224082490|ref|XP_002306713.1| SET domain protein [Populus trichocarpa] gi|222856162|gb|EEE93709.1| SET domain protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/492 (72%), Positives = 409/492 (83%), Gaps = 3/492 (0%)

Query: 19  EEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGY 78
           EE P Y+HI +N+F+ RKHKKQKEEDIAIC C+ + ++ +S+CGERCLN+LTSTECTPGY
Sbjct: 6   EELPHYEHIERNDFIYRKHKKQKEEDIAICECKFNGDDPDSACGERCLNLLTSTECTPGY 65

Query: 79  CPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRR 138
           CPCGV+CKNQRFQK +YAKT+L KTEGRGWGLLADE IKAGQFIIEYCGEVISWKEA++R
Sbjct: 66  CPCGVYCKNQRFQKFEYAKTQLFKTEGRGWGLLADEEIKAGQFIIEYCGEVISWKEAKKR 125

Query: 139 SQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFA 198
           SQ YE QGLKDA+II LN+ ESIDAT KGS ARFINHSCQPNCETRKW VLGEIRVGIFA
Sbjct: 126 SQVYENQGLKDAFIISLNSTESIDATKKGSLARFINHSCQPNCETRKWTVLGEIRVGIFA 185

Query: 199 KQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSV 258
           KQ+I +GTELAYDYNFEWYGG KVRCLCGA  CSGFLGAKSRGFQEDTYLWEDDD+RYS+
Sbjct: 186 KQNISIGTELAYDYNFEWYGGAKVRCLCGAVNCSGFLGAKSRGFQEDTYLWEDDDDRYSI 245

Query: 259 EKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSLVVQPL 318
           EKIPLYDSAEDEPS    K +  + +EY + GK EYS  MN  V+ +  L+ST L VQPL
Sbjct: 246 EKIPLYDSAEDEPSSKFLK-IANSDSEYDIGGKIEYSTVMNFDVESDKPLESTVLSVQPL 304

Query: 319 ESVPMEGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGPESMP 378
           +S PMEGVV+NA+K E +EE  LY Q T Q  F+  NAMISRIRSNSACRNYHIG   +P
Sbjct: 305 DSFPMEGVVMNAVKAEANEEMALYSQGTPQS-FAPKNAMISRIRSNSACRNYHIGSGPVP 363

Query: 379 KKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLYNDIR 438
           KKRS+  S GKLKHL QK VDAK V +LLA KEAQEEVL  EEMKN+A+S+L+ LYN+IR
Sbjct: 364 KKRSKQYSTGKLKHLMQKQVDAKRVTKLLAVKEAQEEVLTYEEMKNDAASELSLLYNEIR 423

Query: 439 PAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTRKPNQAKAC-D 497
           P IEEHERDSQDSV T+VAEKWI+ CCTKLK EFDLYSSIIKN+ACTP R   QA+   +
Sbjct: 424 PVIEEHERDSQDSVPTTVAEKWIQVCCTKLKAEFDLYSSIIKNIACTPQRTLEQARPSEE 483

Query: 498 ANSVTEVKYLGF 509
             +  EVK+LG+
Sbjct: 484 PGNDNEVKFLGY 495

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255575537|ref|XP_002528669.1| set domain protein, putative [Ricinus communis] gi|223531892|gb|EEF33708.1| set domain protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|342209884|gb|AEL16989.1| ASH1-like protein [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|449446403|ref|XP_004140961.1| PREDICTED: histone-lysine N-methyltransferase ASHH1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359493199|ref|XP_003634540.1| PREDICTED: histone-lysine N-methyltransferase ASHH1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576073|ref|XP_003556159.1| PREDICTED: histone-lysine N-methyltransferase ASHH1-like [Glycine max] Back     alignment and taxonomy information
>gi|356535766|ref|XP_003536414.1| PREDICTED: histone-lysine N-methyltransferase ASHH1-like [Glycine max] gi|34529091|dbj|BAC85636.1| unnamed protein product [Homo sapiens] Back     alignment and taxonomy information
>gi|357443463|ref|XP_003592009.1| Histone-lysine N-methyltransferase NSD3 [Medicago truncatula] gi|355481057|gb|AES62260.1| Histone-lysine N-methyltransferase NSD3 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357443507|ref|XP_003592031.1| hypothetical protein MTR_1g098000 [Medicago truncatula] gi|355481079|gb|AES62282.1| hypothetical protein MTR_1g098000 [Medicago truncatula] Back     alignment and taxonomy information
>gi|22330671|ref|NP_177797.2| histone-lysine N-methyltransferase ASHH1 [Arabidopsis thaliana] gi|42572135|ref|NP_974158.1| histone-lysine N-methyltransferase ASHH1 [Arabidopsis thaliana] gi|75243465|sp|Q84WW6.1|ASHH1_ARATH RecName: Full=Histone-lysine N-methyltransferase ASHH1; AltName: Full=ASH1 homolog 1; AltName: Full=Protein SET DOMAIN GROUP 26 gi|25054844|gb|AAN71912.1| unknown protein [Arabidopsis thaliana] gi|225898088|dbj|BAH30376.1| hypothetical protein [Arabidopsis thaliana] gi|332197758|gb|AEE35879.1| histone-lysine N-methyltransferase ASHH1 [Arabidopsis thaliana] gi|332197759|gb|AEE35880.1| histone-lysine N-methyltransferase ASHH1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query509
TAIR|locus:2030131492 ASHH1 "ASH1-RELATED PROTEIN 1" 0.929 0.961 0.635 2e-166
DICTYBASE|DDB_G0268132898 DDB_G0268132 "SET domain-conta 0.422 0.239 0.457 4.7e-50
UNIPROTKB|H7C3H41675 SETD2 "Histone-lysine N-methyl 0.432 0.131 0.412 1.6e-49
UNIPROTKB|E2RMP9 2562 SETD2 "Uncharacterized protein 0.432 0.085 0.412 2.7e-49
POMBASE|SPAC29B12.02c 798 set2 "histone lysine methyltra 0.504 0.322 0.386 1.9e-48
UNIPROTKB|Q9BYW2 2564 SETD2 "Histone-lysine N-methyl 0.432 0.085 0.412 2.4e-48
UNIPROTKB|F1NTN0 2069 SETD2 "Uncharacterized protein 0.432 0.106 0.416 2.9e-48
UNIPROTKB|F1MDT8 2538 SETD2 "Uncharacterized protein 0.432 0.086 0.412 2e-47
UNIPROTKB|F1S8S01361 WHSC1 "Uncharacterized protein 0.424 0.158 0.436 3.6e-47
UNIPROTKB|O960281365 WHSC1 "Histone-lysine N-methyl 0.424 0.158 0.436 9.6e-47
TAIR|locus:2030131 ASHH1 "ASH1-RELATED PROTEIN 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
 Identities = 314/494 (63%), Positives = 381/494 (77%)

Query:    19 EEFPSYQHIYQNEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGY 78
             +E P Y+HIYQN+F  RKHKKQKEEDI+IC C+ D  + +S+CGERCLNV+T+TECTPGY
Sbjct:    12 DELPQYEHIYQNDFSYRKHKKQKEEDISICECKFDFGDPDSACGERCLNVITNTECTPGY 71

Query:    79 CPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRR 138
             CPCGV+CKNQ+FQKC+YAKTKL+K EGRGWGL+A E IKAGQFI+EYCGEVISWKEA++R
Sbjct:    72 CPCGVYCKNQKFQKCEYAKTKLIKCEGRGWGLVALEEIKAGQFIMEYCGEVISWKEAKKR 131

Query:   139 SQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFA 198
             +Q YET G+KDAYII LNA E+IDAT KGS ARFINHSC+PNCETRKWNVLGE+RVGIFA
Sbjct:   132 AQTYETHGVKDAYIISLNASEAIDATKKGSLARFINHSCRPNCETRKWNVLGEVRVGIFA 191

Query:   199 KQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRGFQEDTYLWEDDDERYSV 258
             K+ I   TELAYDYNFEWYGG KVRCLCGA  CSGFLGAKSRGFQEDTY+WED D+RYSV
Sbjct:   192 KESISPRTELAYDYNFEWYGGAKVRCLCGAVACSGFLGAKSRGFQEDTYVWEDGDDRYSV 251

Query:   259 EKIPLYDSAEDEPSLTLFKTVEATKTEYVVDGKEEYSMGMNVSVKPENHLDSTSL-VVQP 317
             +KIP+YDSAEDE +    K  E+   E     KE+        +  ENHL+ST+L + Q 
Sbjct:   252 DKIPVYDSAEDELTSEPSKNGESNTNEE----KEK-------DISTENHLESTALNIQQQ 300

Query:   318 LESVPM---EGVVVNAIKIEESEETKLYPQDTQQQVFSQNNAMISRIRSNSACRNYHIGP 374
              +S P    E VV   +K E SE+ KL  Q++Q+   S   A++SR+  N +     I  
Sbjct:   301 SDSTPTPMEEDVVTETVKTETSEDMKLLSQNSQEDS-SPKTAIVSRVHGNIS----KIKS 355

Query:   375 ESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLLAFKEAQEEVLRNEEMKNEASSQLASLY 434
             ES+PKKR +  S GK K++AQKHVD  +V QLLA KEAQ+EVL+ EE+K EA+ +L+SLY
Sbjct:   356 ESLPKKRGRPFSGGKTKNVAQKHVDIANVVQLLATKEAQDEVLKYEEVKKEAAVRLSSLY 415

Query:   435 NDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEFDLYSSIIKNVACTPTR-KPNQA 493
             ++IRPAIEEHERDSQDSVATSVAEKWI+A C KLK EFDLYSS+IKN+A TP + +  + 
Sbjct:   416 DEIRPAIEEHERDSQDSVATSVAEKWIQASCNKLKAEFDLYSSVIKNIASTPIKPQDTKT 475

Query:   494 KACDANSVTEVKYL 507
             K  +A +   +K L
Sbjct:   476 KVAEAGNEDHIKLL 489
GO:0005634 "nucleus" evidence=ISM;IEA;IDA
GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP
GO:0016571 "histone methylation" evidence=IDA
GO:0006281 "DNA repair" evidence=IMP
GO:0010224 "response to UV-B" evidence=IEP
DICTYBASE|DDB_G0268132 DDB_G0268132 "SET domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|H7C3H4 SETD2 "Histone-lysine N-methyltransferase SETD2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RMP9 SETD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
POMBASE|SPAC29B12.02c set2 "histone lysine methyltransferase Set2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BYW2 SETD2 "Histone-lysine N-methyltransferase SETD2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NTN0 SETD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MDT8 SETD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S8S0 WHSC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O96028 WHSC1 "Histone-lysine N-methyltransferase NSD2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84WW6ASHH1_ARATH2, ., 1, ., 1, ., 4, 30.63560.92920.9613yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1.430.991
3rd Layer2.1.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
SDG927
SET domain protein (495 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query509
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 4e-41
pfam00856113 pfam00856, SET, SET domain 2e-34
COG2940480 COG2940, COG2940, Proteins containing SET domain [ 5e-19
smart0057050 smart00570, AWS, associated with SET domains 9e-13
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information 
 Score =  143 bits (363), Expect = 4e-41
 Identities = 56/123 (45%), Positives = 79/123 (64%)

Query: 96  AKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICL 155
            K ++ K+ G+GWG+ A E+I  G+FI EY GE+I+ +EA  R +AY+T G K  Y+  +
Sbjct: 1   NKLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDI 60

Query: 156 NALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFE 215
           ++   IDA  KG+ ARFINHSC+PNCE     V G+ R+ IFA +DI  G EL  DY  +
Sbjct: 61  DSDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDYGSD 120

Query: 216 WYG 218
           +  
Sbjct: 121 YAN 123

Putative methyl transferase, based on outlier plant homologues. Length = 124
>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information
>gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|197795 smart00570, AWS, associated with SET domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 509
KOG4442 729 consensus Clathrin coat binding protein/Huntingtin 100.0
KOG1082364 consensus Histone H3 (Lys9) methyltransferase SUV3 100.0
KOG10801005 consensus Histone H3 (Lys4) methyltransferase comp 99.98
KOG1079739 consensus Transcriptional repressor EZH1 [Transcri 99.97
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 99.92
KOG11411262 consensus Predicted histone methyl transferase [Ch 99.92
KOG10831306 consensus Putative transcription factor ASH1/LIN-5 99.89
KOG1085392 consensus Predicted methyltransferase (contains a 99.75
COG2940480 Proteins containing SET domain [General function p 99.71
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.6
KOG1081463 consensus Transcription factor NSD1 and related SE 99.46
KOG2589453 consensus Histone tail methylase [Chromatin struct 99.34
smart0057051 AWS associated with SET domains. subdomain of PRES 98.82
PF05033103 Pre-SET: Pre-SET motif; InterPro: IPR007728 This r 98.74
smart0046898 PreSET N-terminal to some SET domains. A Cys-rich 98.22
KOG2461396 consensus Transcription factor BLIMP-1/PRDI-BF1, c 98.06
KOG11411262 consensus Predicted histone methyl transferase [Ch 96.63
smart0050826 PostSET Cysteine-rich motif following a subset of 95.95
KOG1081463 consensus Transcription factor NSD1 and related SE 93.07
KOG2084482 consensus Predicted histone tail methylase contain 92.13
KOG1337472 consensus N-methyltransferase [General function pr 82.87
>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=3e-71  Score=595.75  Aligned_cols=496  Identities=33%  Similarity=0.449  Sum_probs=365.3

Q ss_pred             ccCcccccCCCCCCCCCceeeccccccccccccCCCC-CCccccccCCCCC---CCCccccCccccccccccCCCCCC-C
Q 010495            7 LMPLFPSENLQCEEFPSYQHIYQNEFLSRKHKKQKEE-DIAICVCRVDPNN---LESSCGERCLNVLTSTECTPGYCP-C   81 (509)
Q Consensus         7 ~~pl~~~n~~~~~~pP~y~~I~~n~~~~~~~~~~~~~-~~~~C~C~~~c~~---~~~~C~~~C~n~~~~~EC~p~~C~-C   81 (509)
                      ..++...+....+..|.|.++....|+...++...++ +.+.|+|.+...+   +.++||.+|.|+++++||+++.|+ |
T Consensus        26 r~~~~~~e~~~k~e~~~~f~~~~e~~y~~krk~~~ee~~~m~Cdc~~~~~d~~n~~~~cg~~CiNr~t~iECs~~~C~~c  105 (729)
T KOG4442|consen   26 RAQLFKKEQLLKEEALTKFENLDEKFYANKRKKKKEENDEMICDCKPKTGDGANGACACGEDCINRMTSIECSDRECPRC  105 (729)
T ss_pred             cccccccchhhhcccchhhhhhhhhhhHHhhccCcccCcceeeecccccccccccccccCccccchhhhcccCCccCCCc
Confidence            3445555555556666655555555555544444444 8899999986555   789999999999999999998999 9


Q ss_pred             CCCCCCccccccccceEEEEecCCCceeeeeccccCCCCEEEEeeceeeCHHHHHHHHHHHHhcCCCcceeeecCcceee
Q 010495           82 GVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESI  161 (509)
Q Consensus        82 ~~~C~Nr~~Qk~~~~kleV~~s~~kG~GLfA~edI~kGefI~EY~GEVIt~~E~~~R~~~y~~~g~~~~Y~~~l~~~~~I  161 (509)
                      |.+|.|++||+.++++++||.|+++||||+|.++|++|+||+||+||||++.|+++|...|+.++..|+|+|.|..+.+|
T Consensus       106 g~~C~NQRFQkkqyA~vevF~Te~KG~GLRA~~dI~~g~FI~EY~GEVI~~~Ef~kR~~~Y~~d~~kh~Yfm~L~~~e~I  185 (729)
T KOG4442|consen  106 GVYCKNQRFQKKQYAKVEVFLTEKKGCGLRAEEDIPKGQFILEYIGEVIEEKEFEKRVKRYAKDGIKHYYFMALQGGEYI  185 (729)
T ss_pred             cccccchhhhhhccCceeEEEecCcccceeeccccCCCcEEeeeccccccHHHHHHHHHHHHhcCCceEEEEEecCCcee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccccCcccccCCCCCCccceeeeeecCeeEEEEEEecCCCCCCeEEEeCCCCCCCCcceEEeeCCCCCccccCcccCC
Q 010495          162 DATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSRG  241 (509)
Q Consensus       162 DA~~~GN~aRFINHSC~PNc~~~~~~v~g~~rI~~fA~RDIkaGEELT~DYg~~~~~~~~~~ClCGa~~CRG~Lg~k~~~  241 (509)
                      ||+.+||++|||||||+|||.+++|.|+|..||||||.|.|++||||||||++++++...++|+||+++|||||||+++.
T Consensus       186 DAT~KGnlaRFiNHSC~PNa~~~KWtV~~~lRvGiFakk~I~~GEEITFDYqf~rYGr~AQ~CyCgeanC~G~IGgk~q~  265 (729)
T KOG4442|consen  186 DATKKGNLARFINHSCDPNAEVQKWTVPDELRVGIFAKKVIKPGEEITFDYQFDRYGRDAQPCYCGEANCRGWIGGKPQT  265 (729)
T ss_pred             cccccCcHHHhhcCCCCCCceeeeeeeCCeeEEEEeEecccCCCceeeEecccccccccccccccCCcccccccCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999443


Q ss_pred             -------------------cccccccccCCCccccccccc-ccC-----CccCccchhhhh------hhccccccccccC
Q 010495          242 -------------------FQEDTYLWEDDDERYSVEKIP-LYD-----SAEDEPSLTLFK------TVEATKTEYVVDG  290 (509)
Q Consensus       242 -------------------~~e~~~~~~d~~~r~~~e~ip-~~d-----~~~d~~~~~~~~------~~~~~~~~~~~~~  290 (509)
                                         ..+++..|.++..++...+++ ++|     +.+.........      ++-...+++....
T Consensus       266 da~~~~prn~~~A~~~~~~~~e~~~~kl~~~~~~~~~~~e~~~d~~~~~s~sr~~~~~~~~~~~i~~l~l~~~~~~~~~~  345 (729)
T KOG4442|consen  266 DASSLLPRNSAHALGKVIEDEEDTGKKLKKREGMSTLKAEGLSDRLLRLSLSRKMVRSPSLTTKISVLLLQTIAEDCVRS  345 (729)
T ss_pred             cccccccchhhhhccccccchhhhhhccccccccccccccccchhhhhhhcccccccccccccceeeeehhhcchHHHHH
Confidence                               112345566666666666555 322     222222111110      0000000000000


Q ss_pred             cccc-ccccccCCCCC--CCCCCcce-eeccCCCcCccc-----cc---ccccccccccccccCCccch--hhhcccccc
Q 010495          291 KEEY-SMGMNVSVKPE--NHLDSTSL-VVQPLESVPMEG-----VV---VNAIKIEESEETKLYPQDTQ--QQVFSQNNA  356 (509)
Q Consensus       291 ~~e~-~~~~~~~~~~~--~~~~~~~~-~~~~~~~~pm~~-----~~---~~~~~~~~~~~~~~~~~~~~--q~~~~~~~~  356 (509)
                      -.+. +.-...+.+..  ++...+.+ .+.-+.+||..-     .+   ++...++.|++++..+- ++  |..+++...
T Consensus       346 ~l~~~~l~~~~d~~r~~~~~~l~~~~~~~l~sf~Ip~~~~l~~~k~~~~~qr~~~~~sq~~~~vp~-~~~~~~~ss~~~~  424 (729)
T KOG4442|consen  346 FLDRHGLILVGDKGRAKIALRLYTALFLTLESFSIPTPIMLEESKVRPSRQRDATTKSQDLAPVPL-ATKNQRHSSPAEN  424 (729)
T ss_pred             HHHhhccccccchhhHHHHHHHHHHHHHHHhhcCCCCcccccccccccchhhhccchhhhcccCCc-cCccccccchhhh
Confidence            0000 00000111110  11111111 222244555441     11   12222345555555553 22  445555545


Q ss_pred             chhhcccCccccccccCCcCCCCCcccccCCCcccchhhhcccHHHHHHHH-------hhHHHHHHHhhhHHH-------
Q 010495          357 MISRIRSNSACRNYHIGPESMPKKRSQLKSNGKLKHLAQKHVDAKHVCQLL-------AFKEAQEEVLRNEEM-------  422 (509)
Q Consensus       357 ~~~~~~~~s~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~k~~~~~~~~~~~-------~~~~a~~~~~~~~~~-------  422 (509)
                      .+..+...-+    |+....-+.++++++-+|+.++..++.+.+..+-..|       +-+.+++....+.--       
T Consensus       425 ~~~~l~~~~p----~ik~~~~~~~~~~~k~~~~~~n~~~~~~~a~~~l~D~~~~r~~~g~~~~~dn~~~~~~n~~~~s~q  500 (729)
T KOG4442|consen  425 ASKTLENEKP----SIKEDITNARRKQLKFGGYNRNGSKKENVAARPLSDLRREREFNGWRSRLDNCRTDLVNHELNSRQ  500 (729)
T ss_pred             hhhhcccCCC----ccccccchhhhcchhcccccccccccccccccchhhhhhhhcccccHHHHhhccccccchhccccc
Confidence            5555544444    6777778899999999999999999999998888887       778888876654322       


Q ss_pred             ----------------------------hhHHH--HHHHHHhhhhhhhhhhhhccccCchhhHHHHHHHHHhhhcccccc
Q 010495          423 ----------------------------KNEAS--SQLASLYNDIRPAIEEHERDSQDSVATSVAEKWIEACCTKLKTEF  472 (509)
Q Consensus       423 ----------------------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (509)
                                                  +.++.  +-++.+++++|||+|||.++.|+.|.+.||..|++..|.|||+|+
T Consensus       501 ~~~~~~~st~~s~~~q~~~nn~~~~~~~~~d~r~~s~~~~~sd~e~p~~ee~~~~~~~~~v~~~a~e~sv~q~~klk~e~  580 (729)
T KOG4442|consen  501 HLPHRGRSTKPSSEYQSCSNNILPRGETREDARRRSKKSILSDLERPANEEARRSVQEEVVALVAAERSVYQKNKLKAEG  580 (729)
T ss_pred             cCCccccccccCccccccccccccccCccchhhhccccCChhhhhhhhhhhhhhhhhHHHHHHHHHHHHHhcchhhhhhh
Confidence                                        22333  337889999999999999999999999999999999999999999


Q ss_pred             hhhHHHhhhcccCCCCCCCcc-cccccCCCCccccc
Q 010495          473 DLYSSIIKNVACTPTRKPNQA-KACDANSVTEVKYL  507 (509)
Q Consensus       473 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  507 (509)
                      ||++.++.+++-+|.++.-+. +..+-.|++.++.|
T Consensus       581 ~~~~~~~d~~~~~k~~~~y~k~~~~e~~n~d~~p~~  616 (729)
T KOG4442|consen  581 DLESVLADIIADHKGAPYYPKTQQAEKLNEDTLPPL  616 (729)
T ss_pred             hhhhhhhhhhcCcccCcCCCcchhhhhhccccCCCc
Confidence            999999999999999876643 33344666666654

>KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG1079 consensus Transcriptional repressor EZH1 [Transcription] Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] Back     alignment and domain information
>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] Back     alignment and domain information
>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] Back     alignment and domain information
>smart00570 AWS associated with SET domains Back     alignment and domain information
>PF05033 Pre-SET: Pre-SET motif; InterPro: IPR007728 This region is found in a number of histone lysine methyltransferases (HMTase), N-terminal to the SET domain; it is generally described as the pre-SET domain Back     alignment and domain information
>smart00468 PreSET N-terminal to some SET domains Back     alignment and domain information
>KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>smart00508 PostSET Cysteine-rich motif following a subset of SET domains Back     alignment and domain information
>KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] Back     alignment and domain information
>KOG2084 consensus Predicted histone tail methylase containing SET domain [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1337 consensus N-methyltransferase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query509
4fmu_A278 Crystal Structure Of Methyltransferase Domain Of Hu 1e-47
3ooi_A232 Crystal Structure Of Human Histone-Lysine N-Methylt 5e-45
3ope_A222 Structural Basis Of Auto-Inhibitory Mechanism Of Hi 1e-40
2w5y_A192 Binary Complex Of The Mixed Lineage Leukaemia (Mll1 6e-24
2r3a_A300 Methyltransferase Domain Of Human Suppressor Of Var 1e-20
1ml9_A302 Structure Of The Neurospora Set Domain Protein Dim- 2e-20
3bo5_A290 Crystal Structure Of Methyltransferase Domain Of Hu 1e-17
2igq_A285 Human Euchromatic Histone Methyltransferase 1 Lengt 1e-15
3hna_A287 Crystal Structure Of Catalytic Domain Of Human Euch 1e-15
1mvh_A299 Structure Of The Set Domain Histone Lysine Methyltr 1e-15
3fpd_A261 G9a-Like Protein Lysine Methyltransferase Inhibitio 2e-15
2o8j_A281 Human Euchromatic Histone Methyltransferase 2 Lengt 7e-15
3k5k_A283 Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin 9e-15
4i51_A286 Methyltransferase Domain Of Human Euchromatic Histo 1e-14
2bqz_A161 Crystal Structure Of A Ternary Complex Of The Human 2e-10
1zkk_A167 Crystal Structure Of Hset8 In Ternary Complex With 2e-10
4ij8_A165 Crystal Structure Of The Complex Of Setd8 With Sam 3e-10
3f9z_A166 Structural Insights Into Lysine Multiple Methylatio 6e-10
3f9w_A166 Structural Insights Into Lysine Multiple Methylatio 6e-10
>pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 135/223 (60%), Gaps = 7/223 (3%)
Query: 24  YQHIYQNEFLSRKHKKQKEEDIAICVCRVDP------NNLESSCGERCLNVLTSTECTPG 77
           +  I +N +L+ + K +   DI    C   P         E +CGE CLN L   EC+  
Sbjct: 40  FDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIECS-S 98
Query: 78  YCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARR 137
            CP G +C N+RFQ+ Q+A  +++ TE +GWGL A +++ +  F++EYCGEV+  KE + 
Sbjct: 99  RCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKA 158
Query: 138 RSQAYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIF 197
           R + Y        Y + L   E IDAT KG+ +RF+NHSC+PNCET+KW V G++RVG F
Sbjct: 159 RVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFF 218
Query: 198 AKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLGAKSR 240
             + +P G+EL +DY F+ YG    +C CG+A C G+LG ++R
Sbjct: 219 TTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENR 261
>pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 Back     alignment and structure
>pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 Back     alignment and structure
>pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 Back     alignment and structure
>pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 Back     alignment and structure
>pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 Back     alignment and structure
>pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 Back     alignment and structure
>pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 Back     alignment and structure
>pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 Back     alignment and structure
>pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 Back     alignment and structure
>pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 Back     alignment and structure
>pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 Back     alignment and structure
>pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 Back     alignment and structure
>pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 Back     alignment and structure
>pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 Back     alignment and structure
>pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 Back     alignment and structure
>pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 Back     alignment and structure
>pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure
>pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query509
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 1e-100
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 1e-96
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 4e-96
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 1e-79
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 3e-71
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 4e-68
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 4e-66
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 2e-64
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 1e-63
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 2e-63
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 2e-47
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 2e-39
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 1e-33
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 2e-31
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 8e-16
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 8e-12
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 2e-11
3db5_A151 PR domain zinc finger protein 4; methyltransferase 1e-10
3dal_A196 PR domain zinc finger protein 1; methyltransferase 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 8e-05
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 Back     alignment and structure
 Score =  301 bits (773), Expect = e-100
 Identities = 92/216 (42%), Positives = 124/216 (57%), Gaps = 2/216 (0%)

Query: 22  PSYQHIYQNEFLSRKHK-KQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCP 80
           P Y+HI  N  + R         +I  C C+    N        C+N +   EC P  CP
Sbjct: 18  PPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDEN-PCGIDSECINRMLLYECHPTVCP 76

Query: 81  CGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQ 140
            G  C+NQ F K QY + ++ +T  RGWGL    +IK G+F+ EY GE+I  +E R R +
Sbjct: 77  AGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIR 136

Query: 141 AYETQGLKDAYIICLNALESIDATVKGSHARFINHSCQPNCETRKWNVLGEIRVGIFAKQ 200
             +   + + Y++ L+    IDA  KG++ARF+NH CQPNCET+KW+V G+ RVG+FA  
Sbjct: 137 YAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALS 196

Query: 201 DIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLG 236
           DI  GTEL ++YN E  G  K  C CGA  CSGFLG
Sbjct: 197 DIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query509
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 100.0
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 100.0
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 100.0
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 100.0
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 100.0
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 100.0
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 100.0
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 100.0
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 100.0
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 100.0
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 99.95
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 99.94
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 99.94
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 99.93
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 99.92
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 99.9
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 99.78
3db5_A151 PR domain zinc finger protein 4; methyltransferase 99.76
3dal_A196 PR domain zinc finger protein 1; methyltransferase 99.72
3ray_A237 PR domain-containing protein 11; structural genomi 99.62
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 99.48
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 98.77
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 98.77
3qww_A433 SET and MYND domain-containing protein 2; methyltr 98.64
3qxy_A449 N-lysine methyltransferase SETD6; epigenetics, pro 96.7
2h21_A440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 96.66
3smt_A497 Histone-lysine N-methyltransferase SETD3; histone 95.44
3qww_A433 SET and MYND domain-containing protein 2; methyltr 80.82
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.2e-55  Score=430.44  Aligned_cols=219  Identities=42%  Similarity=0.798  Sum_probs=201.4

Q ss_pred             CCCCCCCceeecccccccccccc-CCCCCCccccccCCCCCCCCccccCccccccccccCCCCCCCCCCCCCcccccccc
Q 010495           17 QCEEFPSYQHIYQNEFLSRKHKK-QKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQRFQKCQY   95 (509)
Q Consensus        17 ~~~~pP~y~~I~~n~~~~~~~~~-~~~~~~~~C~C~~~c~~~~~~C~~~C~n~~~~~EC~p~~C~C~~~C~Nr~~Qk~~~   95 (509)
                      ...+||+|++|+.|++..+.+.. ...++...|+|+..+.+ .|+|..+|+|+++.+||++..|+|+..|.||++|++.+
T Consensus        13 ~~~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~-~C~~~~~C~nr~~~~EC~~~~C~c~~~C~Nr~~q~~~~   91 (232)
T 3ooi_A           13 NDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDEN-PCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQY   91 (232)
T ss_dssp             HCCSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSS-TTCTTSCCHHHHTTBCCCTTTCTTGGGCCCCHHHHTCC
T ss_pred             cCCCCCCceEeeccccccccccccCCcccCCcccccCCCCC-CCCCCCCCcCcCceeEeCCCCCCCCCCcCCccccCCCC
Confidence            34679999999999998875543 44567889999976544 24555789999999999987899999999999999999


Q ss_pred             ceEEEEecCCCceeeeeccccCCCCEEEEeeceeeCHHHHHHHHHHHHhcCCCcceeeecCcceeeecccccCcccccCC
Q 010495           96 AKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKDAYIICLNALESIDATVKGSHARFINH  175 (509)
Q Consensus        96 ~kleV~~s~~kG~GLfA~edI~kGefI~EY~GEVIt~~E~~~R~~~y~~~g~~~~Y~~~l~~~~~IDA~~~GN~aRFINH  175 (509)
                      ++++|++++++||||||+++|++|+||+||+|++++..++..|...+...+..+.|+|.++.+++|||+.+||++|||||
T Consensus        92 ~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNH  171 (232)
T 3ooi_A           92 PEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNH  171 (232)
T ss_dssp             CCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEE
T ss_pred             ccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccc
Confidence            99999999999999999999999999999999999999999998877777777899999999999999999999999999


Q ss_pred             CCCCccceeeeeecCeeEEEEEEecCCCCCCeEEEeCCCCCCCCcceEEeeCCCCCccccC
Q 010495          176 SCQPNCETRKWNVLGEIRVGIFAKQDIPVGTELAYDYNFEWYGGTKVRCLCGAATCSGFLG  236 (509)
Q Consensus       176 SC~PNc~~~~~~v~g~~rI~~fA~RDIkaGEELT~DYg~~~~~~~~~~ClCGa~~CRG~Lg  236 (509)
                      ||+|||.++.|.+++..+|+|||+|||++||||||||++++|+...|.|+||+++|||+||
T Consensus       172 SC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG  232 (232)
T 3ooi_A          172 CCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG  232 (232)
T ss_dssp             CSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred             cCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcCC
Confidence            9999999999999999999999999999999999999999999889999999999999997
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 509
d1ml9a_284 b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T 7e-38
d1mvha_269 b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S 2e-36
d2f69a2171 b.85.7.1 (A:194-364) Histone H3 K4-specific methyl 3e-34
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 5e-19
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 Back     information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

 Score =  138 bits (348), Expect = 7e-38
 Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 33/226 (14%)

Query: 30  NEFLSRKHKKQKEEDIAICVCRVDPNNLESSCGERCLNVLTSTECTPGYCPCGVFCKNQR 89
            +         +++  A          L     +    +    EC  G C C   C N+ 
Sbjct: 63  PDSDEEADPYTRKKRFAYYSQGAKKGLLRDRVLQSQEPIY---ECHQG-CACSKDCPNRV 118

Query: 90  FQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEARRRSQAYETQGLKD 149
            ++ +    ++ +T+ RGWG+    NIK GQF+  Y GE+I+ +EA RR         KD
Sbjct: 119 VERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKD 178

Query: 150 AYIICLNALES--------------IDATVKGSHARFINHSCQPNCETRKWNV----LGE 191
            Y+  L+                  +D        RFINHSC PN               
Sbjct: 179 VYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHI 238

Query: 192 IRVGIFAKQDIPVGTELAYDYNFEWYG-----------GTKVRCLC 226
             + +FA +DIP GTEL +DY     G               +CLC
Sbjct: 239 HDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 284
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query509
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 100.0
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 100.0
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 99.93
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 99.91
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 98.27
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 82.58
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure
class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: Histone lysine methyltransferases
domain: Dim-5
species: Fungus (Neurospora crassa) [TaxId: 5141]

Probab=100.00  E-value=1.8e-45  Score=366.66  Aligned_cols=210  Identities=27%  Similarity=0.424  Sum_probs=169.6

Q ss_pred             ccCcccccCCCCCCCC-CceeeccccccccccccCCCCCCccccccCCC--CCCCCccccCccc----------------
Q 010495            7 LMPLFPSENLQCEEFP-SYQHIYQNEFLSRKHKKQKEEDIAICVCRVDP--NNLESSCGERCLN----------------   67 (509)
Q Consensus         7 ~~pl~~~n~~~~~~pP-~y~~I~~n~~~~~~~~~~~~~~~~~C~C~~~c--~~~~~~C~~~C~n----------------   67 (509)
                      .+||+++|++|.+.|| .|+||.++++....... ......+|+|..++  ....|.|...+..                
T Consensus         1 ~~pi~~~N~vd~~~~p~~f~Yi~~~~~~~~~~~~-~~~~~~gC~C~~~~~c~~~~C~C~~~~~~~~~~~~~~~~~~~~~~   79 (284)
T d1ml9a_           1 QLPISIVNREDDAFLNPNFRFIDHSIIGKNVPVA-DQSFRVGCSCASDEECMYSTCQCLDEMAPDSDEEADPYTRKKRFA   79 (284)
T ss_dssp             CCCEEEECSSSSCCCCTTCEECSSCEECTTCCCC-CGGGCCCCCCSSTTGGGSTTSGGGTTSCCC-----------CCSS
T ss_pred             CCCEEEEeCCCCCCCCCCCEECccEEeCCCCccC-CccCCCCCCCcCCCCcCCCCCcChhhcCccccccccccccccccc
Confidence            4899999999988765 69999999876543333 23345689997653  2334555332210                


Q ss_pred             ------------------cccccccCCCCCCCCCCCCCccccccccceEEEEecCCCceeeeeccccCCCCEEEEeecee
Q 010495           68 ------------------VLTSTECTPGYCPCGVFCKNQRFQKCQYAKTKLVKTEGRGWGLLADENIKAGQFIIEYCGEV  129 (509)
Q Consensus        68 ------------------~~~~~EC~p~~C~C~~~C~Nr~~Qk~~~~kleV~~s~~kG~GLfA~edI~kGefI~EY~GEV  129 (509)
                                        ....+||++ .|+|+..|.||++|++.+.+++|++++.+||||||+++|++|+||+||.|++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~i~EC~~-~C~C~~~C~Nr~~q~g~~~~lev~kt~~kG~Gv~a~~~I~kGt~I~eY~Gev  158 (284)
T d1ml9a_          80 YYSQGAKKGLLRDRVLQSQEPIYECHQ-GCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEI  158 (284)
T ss_dssp             BBCSSTTBTSBCHHHHHHCCCEECCCT-TCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEE
T ss_pred             cccccccccccccccccCCCceeCCCC-CCCcCCCCCCeeccCCCccCEEEEEcCCCceEEeeCCCcCCCCEEEEecCcc
Confidence                              111489995 8999999999999999999999999999999999999999999999999999


Q ss_pred             eCHHHHHHHHHHHHhcCCCcceeeecCc--------------ceeeecccccCcccccCCCCCCccceeeeeec----Ce
Q 010495          130 ISWKEARRRSQAYETQGLKDAYIICLNA--------------LESIDATVKGSHARFINHSCQPNCETRKWNVL----GE  191 (509)
Q Consensus       130 It~~E~~~R~~~y~~~g~~~~Y~~~l~~--------------~~~IDA~~~GN~aRFINHSC~PNc~~~~~~v~----g~  191 (509)
                      |+..+++++...+......+.|++.++.              .++|||+..||++|||||||+||+.++.|.++    +.
T Consensus       159 i~~~ea~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~iDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~  238 (284)
T d1ml9a_         159 ITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHI  238 (284)
T ss_dssp             ECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGG
T ss_pred             cCHHHHHHHHHHHHhhccCCccceecccccccccccccccCCceeEeeeeccchhheeeccccCCcceEEEEeccCCCCc
Confidence            9999999988877666666778777653              35899999999999999999999999877654    35


Q ss_pred             eEEEEEEecCCCCCCeEEEeCCCCCCC
Q 010495          192 IRVGIFAKQDIPVGTELAYDYNFEWYG  218 (509)
Q Consensus       192 ~rI~~fA~RDIkaGEELT~DYg~~~~~  218 (509)
                      ++|+|||+|||++||||||||++.+|+
T Consensus       239 ~~i~~~A~rdI~~GEELt~dYg~~~~~  265 (284)
T d1ml9a_         239 HDLALFAIKDIPKGTELTFDYVNGLTG  265 (284)
T ss_dssp             CEEEEEESSCBCTTCEEEECTTC----
T ss_pred             eEEEEEECCccCCCCEEEEecCCCCCC
Confidence            799999999999999999999988764
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure