Citrus Sinensis ID: 010523
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU58 | 960 | ATPase 4, plasma membrane | yes | no | 0.765 | 0.405 | 0.835 | 0.0 | |
| P23980 | 704 | Plasma membrane ATPase 2 | N/A | no | 0.720 | 0.519 | 0.825 | 0.0 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.765 | 0.406 | 0.827 | 0.0 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.724 | 0.384 | 0.827 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.765 | 0.406 | 0.830 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.765 | 0.406 | 0.820 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.807 | 0.431 | 0.727 | 1e-179 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.714 | 0.381 | 0.768 | 1e-176 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.763 | 0.408 | 0.763 | 1e-175 | |
| Q43128 | 947 | ATPase 10, plasma membran | no | no | 0.834 | 0.447 | 0.706 | 1e-174 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/389 (83%), Positives = 358/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 270 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 329
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGM
Sbjct: 330 GMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGM 389
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R
Sbjct: 390 LADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIER 449
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 450 RVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRAL 509
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGF
Sbjct: 510 NLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 569
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 570 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 629
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 630 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P23980|PMA2_SOLLC Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/389 (82%), Positives = 353/389 (90%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RL+ QG ITKRM+AI +MA
Sbjct: 14 MYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMA 73
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS+ EN D ID AIVGM
Sbjct: 74 GMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRTENQDAIDTAIVGM 133
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R
Sbjct: 134 LADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIER 193
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+ VI+KFAERGLRSL VAYQEVPEG KESSG PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 194 RVHTVIDKFAERGLRSLGVAYQEVPEGRKESSGGPWQFIGLLPLFDPPRHDSAETIRRAL 253
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI +LP+DELIEKADGF
Sbjct: 254 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDELIEKADGF 313
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 314 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 373
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 374 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 402
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/389 (82%), Positives = 359/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I R
Sbjct: 386 LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/389 (82%), Positives = 353/389 (90%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RL+ QG ITKRM+AI +MA
Sbjct: 267 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMA 326
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS+ EN D IDAAIVGM
Sbjct: 327 GMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMVVLMAARASRTENQDAIDAAIVGM 386
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R
Sbjct: 387 LADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIER 446
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSL VAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 447 RVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRAL 506
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKM+TGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKADGF
Sbjct: 507 NLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPIDELIEKADGF 566
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 567 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 626
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 627 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/389 (83%), Positives = 354/389 (91%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RL+ QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDK LIE+FA GVDADTVVLMAARAS+ EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDADTVVLMAARASRTENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQIL+L HNKS I R
Sbjct: 386 LADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILHLAHNKSDIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALPVDELIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPVDELIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/389 (82%), Positives = 352/389 (90%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RL+ QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDK LIE+FA G+DADTVVLMAARAS++EN D ID AIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDADTVVLMAARASRIENQDAIDTAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R
Sbjct: 386 LADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+ VI+KFAERGLRSL VAYQEVPEG KES+G PWQFI L+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQFIALLPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+DELIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIAALPIDELIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 629 bits (1621), Expect = e-179, Method: Compositional matrix adjust.
Identities = 310/426 (72%), Positives = 351/426 (82%), Gaps = 16/426 (3%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
MF IQHR YR+G+ NLLVLLIGGIPIAMPTVLSVTMAIGS +LS QG ITKRM+AI +MA
Sbjct: 262 MFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNL+E+F GVD D V+L+AARAS+ EN D IDAA+VGM
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAARASRTENQDAIDAAMVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+EVHFLPF+P KRTALTYID++G HR +KG+PEQIL L + K + R
Sbjct: 382 LADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCKEDVKR 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+AVI+K+AERGLRSLAVA QEVPE SKES+G PWQF+GL+PLFDPP HDSAETIR+AL
Sbjct: 442 KVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLPLFDPPRHDSAETIRKAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++D S+ ALPVDELIEKADGF
Sbjct: 502 HLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 562 AGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAF 420
EPGL+VII+AVL SR IFQRM+NY + + T+ V+ L A
Sbjct: 622 EPGLSVIISAVLTSRCIFQRMKNYTIYAVS----------------ITIRIVLGFLLIAL 665
Query: 421 TSKKDF 426
K DF
Sbjct: 666 IWKYDF 671
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 299/389 (76%), Positives = 339/389 (87%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
MF IQ R+YR G+ NLLVLLIGGIPIAMPTVLSVTMAIGS +LS QG ITKRM+AI ++A
Sbjct: 262 MFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEELA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNL+E+FA GVD + V+L+AARAS+VEN D IDA +VGM
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAARASRVENQDAIDACMVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+EVHFLPF+PT KRTALTYID+EG HR +KG+PEQI+ L + K + R
Sbjct: 382 LADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPEQIITLCNCKEDVKR 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV++VI K+AERGLRSLAVA QEVPE SK+S G PWQFIGL+PLFDPP HDSAETIR+AL
Sbjct: 442 KVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLPLFDPPRHDSAETIRKAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ +LPVDELIEKADGF
Sbjct: 502 VLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQ + HI GM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 562 AGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SR IFQRM+NY + +
Sbjct: 622 EPGLSVIISAVLTSRCIFQRMKNYTIYAV 650
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 297/389 (76%), Positives = 335/389 (86%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R YR G++NLLVLLIGGIPIAMP+VLSVTMA GS RL QG ITKRM+AI +MA
Sbjct: 262 MYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHRLFQQGAITKRMTAIEEMA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIVGM
Sbjct: 322 GMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K + R
Sbjct: 382 LADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDVRR 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRRAL
Sbjct: 442 KVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRRAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKADGF
Sbjct: 502 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKKADIGIAV DATDAAR A+DIVLT
Sbjct: 562 AGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 650
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q43128|PMA10_ARATH ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 613 bits (1580), Expect = e-174, Method: Compositional matrix adjust.
Identities = 305/432 (70%), Positives = 353/432 (81%), Gaps = 8/432 (1%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
MF +QHR YR G+NNLLVLLIGGIPIAMPTVLSVT+AIGS RLS QG ITKRM+AI +MA
Sbjct: 270 MFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMA 329
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLCCDKTGTLTLN LTVDKNLIE+F +D DT++L+A RAS++EN D IDAAIV M
Sbjct: 330 GMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDAIDAAIVSM 389
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADP+EARA+I+E+HFLPF+P KRTA+TYIDS+GK +R TKG+PEQ+LNL K++I +
Sbjct: 390 LADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLCQQKNEIAQ 449
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V A+I++FAE+GLRSLAVAYQE+PE S S G PW+F GL+PLFDPP HDS ETI RAL
Sbjct: 450 RVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDSGETILRAL 509
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
SLG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L G + DE A+PVDELIE ADGF
Sbjct: 510 SLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDELIEMADGF 568
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQ H+ GM G+GVNDAPALKKADIGIAVADATDAARS+ADIVLT
Sbjct: 569 AGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIVLT 628
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAI 415
+PGL+VII+AVL SRAIFQRMRNY V + L T + E +F + +IAI
Sbjct: 629 DPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPPFMVLIIAI 688
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 689 LNDGTIMTISKD 700
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | ||||||
| 449440750 | 959 | PREDICTED: ATPase 4, plasma membrane-typ | 0.765 | 0.405 | 0.840 | 0.0 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.836 | 0.444 | 0.780 | 0.0 | |
| 30692952 | 960 | H(+)-ATPase 4 [Arabidopsis thaliana] gi| | 0.765 | 0.405 | 0.835 | 0.0 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.720 | 0.378 | 0.840 | 0.0 | |
| 449528800 | 959 | PREDICTED: LOW QUALITY PROTEIN: ATPase 4 | 0.765 | 0.405 | 0.838 | 0.0 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 0.720 | 0.382 | 0.832 | 0.0 | |
| 312282347 | 956 | unnamed protein product [Thellungiella h | 0.765 | 0.406 | 0.827 | 0.0 | |
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 0.724 | 0.384 | 0.830 | 0.0 | |
| 114336 | 704 | RecName: Full=Plasma membrane ATPase 2; | 0.720 | 0.519 | 0.825 | 0.0 | |
| 15241907 | 956 | H(+)-ATPase 11 [Arabidopsis thaliana] gi | 0.765 | 0.406 | 0.827 | 0.0 |
| >gi|449440750|ref|XP_004138147.1| PREDICTED: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/389 (84%), Positives = 356/389 (91%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 269 MYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 328
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIVGM
Sbjct: 329 GMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGM 388
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I R
Sbjct: 389 LADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIER 448
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 449 KVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRAL 508
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKADGF
Sbjct: 509 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGF 568
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 569 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 628
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 629 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/432 (78%), Positives = 372/432 (86%), Gaps = 7/432 (1%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+FA GVD DTVVLMAARAS++EN D ID AIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRIENQDAIDTAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA IQEVHFLPF+PT KRTALTYIDSEGKMHRV+KG+PEQILNL NKS+I R
Sbjct: 386 LADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLARNKSEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAI 415
EPGL+VII+AVL SRAIFQRM+NY + + L + E +F + +IAI
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEFDFPPFMVLIIAI 685
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 686 LNDGTIMTISKD 697
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30692952|ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase 4, plasma membrane-type; AltName: Full=Proton pump 4 gi|26451228|dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana] gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/389 (83%), Positives = 358/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 270 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 329
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGM
Sbjct: 330 GMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGM 389
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R
Sbjct: 390 LADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIER 449
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 450 RVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRAL 509
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGF
Sbjct: 510 NLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 569
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 570 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 629
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 630 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 658
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/389 (84%), Positives = 356/389 (91%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 276 MYPIQDRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 335
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+FA GVDAD VVLMAARAS++EN D ID AIVGM
Sbjct: 336 GMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADAVVLMAARASRIENQDAIDTAIVGM 395
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA IQEVHFLPF+PT KRTALTYIDS GKMHRV+KG+PEQILNL HNKS I R
Sbjct: 396 LADPKEARAGIQEVHFLPFNPTDKRTALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIER 455
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 456 RVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRAL 515
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+DELIEKADGF
Sbjct: 516 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIAALPIDELIEKADGF 575
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 576 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 635
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 636 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 664
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449528800|ref|XP_004171391.1| PREDICTED: LOW QUALITY PROTEIN: ATPase 4, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/389 (83%), Positives = 356/389 (91%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 269 MYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 328
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNL+E+FA GVD DTVVLMAARAS+ EN D ID AIVGM
Sbjct: 329 GMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGM 388
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA IQEVHFLPF+PT KRTALTYID EGKMHRV+KG+PEQILNL HNKS+I R
Sbjct: 389 LADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIER 448
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+AVI+KFAERGLRSLAVAYQEVP+G KES+G PWQF+GL+PLFDPP H+SAETIRRAL
Sbjct: 449 KVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHESAETIRRAL 508
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI ALPVDELIEKADGF
Sbjct: 509 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGF 568
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 569 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 628
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 629 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/389 (83%), Positives = 356/389 (91%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+FA G+D DTVVLMAARAS+VEN D ID AIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPDTVVLMAARASRVENQDAIDTAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA +QE+HFLPF+PT KRTALTY+D +GKMHRV+KG+PEQILNL HNKS I R
Sbjct: 386 LADPKEARAGVQELHFLPFNPTDKRTALTYLDRDGKMHRVSKGAPEQILNLAHNKSDIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFVGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESIVALP+DELIEKADGF
Sbjct: 506 DLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIVALPIDELIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282347|dbj|BAJ34039.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/389 (82%), Positives = 359/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++E+HFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HNKS+I R
Sbjct: 386 LADPKEARAGVREIHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKSEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+ VI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHTVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFVGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESI ALP+D+LIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIGALPIDDLIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/389 (83%), Positives = 359/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HNK++I R
Sbjct: 386 LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKAEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|114336|sp|P23980.1|PMA2_SOLLC RecName: Full=Plasma membrane ATPase 2; AltName: Full=Proton pump 2 | Back alignment and taxonomy information |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/389 (82%), Positives = 353/389 (90%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RL+ QG ITKRM+AI +MA
Sbjct: 14 MYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMA 73
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNL+E+FA GVDADTVVLMAARAS+ EN D ID AIVGM
Sbjct: 74 GMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDADTVVLMAARASRTENQDAIDTAIVGM 133
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+PT KRTALTY+D EGKMHRV+KG+PEQILNL HNKS I R
Sbjct: 134 LADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKMHRVSKGAPEQILNLAHNKSDIER 193
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+ VI+KFAERGLRSL VAYQEVPEG KESSG PWQFIGL+PLFDPP HDSAETIRRAL
Sbjct: 194 RVHTVIDKFAERGLRSLGVAYQEVPEGRKESSGGPWQFIGLLPLFDPPRHDSAETIRRAL 253
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI +LP+DELIEKADGF
Sbjct: 254 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDELIEKADGF 313
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAV DATDAARSA+DIVLT
Sbjct: 314 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 373
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 374 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 402
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15241907|ref|NP_201073.1| H(+)-ATPase 11 [Arabidopsis thaliana] gi|12230459|sp|Q9LV11.1|PMA11_ARATH RecName: Full=ATPase 11, plasma membrane-type; AltName: Full=Proton pump 11 gi|8809663|dbj|BAA97214.1| plasma membrane proton ATPase-like [Arabidopsis thaliana] gi|21928115|gb|AAM78085.1| AT5g62670/MRG21_9 [Arabidopsis thaliana] gi|38564278|gb|AAR23718.1| At5g62670/MRG21_9 [Arabidopsis thaliana] gi|332010258|gb|AED97641.1| H(+)-ATPase 11 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/389 (82%), Positives = 359/389 (92%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I R
Sbjct: 386 LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKKADIGIAVADATDAARSA+DIVLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 654
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 508 | ||||||
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.834 | 0.441 | 0.704 | 7.1e-180 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.834 | 0.443 | 0.697 | 3.1e-179 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.836 | 0.447 | 0.648 | 2.8e-163 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.836 | 0.447 | 0.643 | 1.8e-159 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.765 | 0.410 | 0.676 | 1.3e-158 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.836 | 0.445 | 0.613 | 1.8e-157 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.836 | 0.447 | 0.629 | 2.1e-156 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.834 | 0.446 | 0.620 | 3.4e-156 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.830 | 0.439 | 0.618 | 9.8e-146 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.834 | 0.447 | 0.634 | 4.8e-144 |
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1488 (528.9 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 305/433 (70%), Positives = 342/433 (78%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 270 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 329
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAARAS++EN D IDAAIVGM
Sbjct: 330 GMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGM 389
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPK+ARA IQEVHFLPF+PT KRTALTYID+EG HRV+KG+PEQILNL HNKS+I R
Sbjct: 390 LADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIER 449
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQ+VPEG K+S+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 450 RVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRAL 509
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ++DESIVALPVDELIEKADGF
Sbjct: 510 NLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 569
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK VLT
Sbjct: 570 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 629
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TVIA 414
EPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +IA
Sbjct: 630 EPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWQFDFPPFMVLIIA 688
Query: 415 ILQ--TAFTSKKD 425
IL T T KD
Sbjct: 689 ILNDGTIMTISKD 701
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1481 (526.4 bits), Expect = 3.1e-179, Sum P(2) = 3.1e-179
Identities = 302/433 (69%), Positives = 343/433 (79%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 266 MYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F GVDADTVVLMAA+AS++EN D IDAAIVGM
Sbjct: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGM 385
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHFLPF+PT KRTALTYIDS+GKMHRV+KG+PEQILNL HN+++I R
Sbjct: 386 LADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIER 445
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V+AVI+KFAERGLRSLAVAYQEVPEG+KES+G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 446 RVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRAL 505
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +DESI ALP+D+LIEKADGF
Sbjct: 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGF 565
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQAR HICGM G+GVNDAPALKK VLT
Sbjct: 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 625
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLD------TVIA 414
EPGL+VII+AVL SRAIFQRM+NY + + ++ + + L ++ D +IA
Sbjct: 626 EPGLSVIISAVLTSRAIFQRMKNYTIYAVS-ITIRIVLGFMLLALIWKFDFPPFMVLIIA 684
Query: 415 ILQ--TAFTSKKD 425
IL T T KD
Sbjct: 685 ILNDGTIMTISKD 697
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1356 (482.4 bits), Expect = 2.8e-163, Sum P(2) = 2.8e-163
Identities = 280/432 (64%), Positives = 322/432 (74%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R YR PIAMP+VLSVTMA GS RL QG ITKRM+AI +MA
Sbjct: 262 MYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHRLFQQGAITKRMTAIEEMA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLCCDKTGTLTLNKLTVDKNL+E+FA GV + V L+AARAS++EN D IDAAIVGM
Sbjct: 322 GMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAARASRIENQDAIDAAIVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA ++EVHF PF+P KRTALTY+DS+G HR +KG+PEQILNL + K + R
Sbjct: 382 LADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCKEDVRR 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+ VI+KFAERGLRSLAVA QEV E K++ G PWQ +GL+PLFDPP HDSAETIRRAL
Sbjct: 442 KVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLLPLFDPPRHDSAETIRRAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQ +D S+ ALPVDELIEKADGF
Sbjct: 502 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIV LQ RNHICGM G+GVNDAPALKK VLT
Sbjct: 562 AGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDG----LSSTEFIQVL-ELNFLFTLDTVIAI 415
EPGL+VII+AVL SRAIFQRM+NY + + + FI ++ + +F + +IAI
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWQFDFSPFMVLIIAI 681
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 682 LNDGTIMTISKD 693
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1348 (479.6 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 278/432 (64%), Positives = 325/432 (75%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 262 MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+VGM
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+EVHFLPF+P KRTALTYIDS+G HRV+KG+PEQIL+L + + + +
Sbjct: 382 LADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKGAPEQILDLANARPDLRK 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV + I+K+AERGLRSLAVA Q VPE +KES G PW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 442 KVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPS+AL G D+D +I ++PV+ELIEKADGF
Sbjct: 502 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDSNIASIPVEELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKK VLT
Sbjct: 562 AGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF----IQVL-ELNFLFTLDTVIAI 415
EPGL+VII+AVL SRAIFQRM+NY + + F I ++ E +F + +IAI
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAI 681
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 682 LNDGTIMTISKD 693
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1331 (473.6 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 263/389 (67%), Positives = 302/389 (77%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 265 MYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 324
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDK+LIE+F +D+D+VVLMAARAS++EN D IDA+IVGM
Sbjct: 325 GMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAARASRIENQDAIDASIVGM 384
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
L DPKEARA I EVHFLPF+P KRTA+TYID G HR +KG+PEQI+ L + + + R
Sbjct: 385 LGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKGAPEQIIELCNLQGETKR 444
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
K + VI+ FAERGLRSL VA Q VPE +KES GSPW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 445 KAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRHDSAETIRRAL 504
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI ETGRRLGMGTNMYPS++L G +DES+V +P+DELIEKADGF
Sbjct: 505 ELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPIDELIEKADGF 564
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK VLT
Sbjct: 565 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 624
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGI 389
EPGL+VII+AVL SRAIFQRM+NY + +
Sbjct: 625 EPGLSVIISAVLTSRAIFQRMKNYTIYAV 653
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1297 (461.6 bits), Expect = 1.8e-157, Sum P(2) = 1.8e-157
Identities = 265/432 (61%), Positives = 310/432 (71%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 267 MYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDK+++E+F +D D +++ AARAS+VEN D IDA IVGM
Sbjct: 327 GMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNAARASRVENQDAIDACIVGM 386
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
L DP+EAR I EVHF PF+P KRTA+TYID+ G HRV+KG+PEQI+ L + + +
Sbjct: 387 LGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVSKGAPEQIIELCNLREDASK 446
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+ + +I+KFA+RGLRSLAV Q V E K S G PWQF+GL+PLFDPP HDSAETIRRAL
Sbjct: 447 RAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGLLPLFDPPRHDSAETIRRAL 506
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL GQD+DESI +LPVDELIEKADGF
Sbjct: 507 DLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIASLPVDELIEKADGF 566
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ HICGM G+GVNDAPALK+ VLT
Sbjct: 567 AGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLT 626
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVLELNFLFTLDT----VIAI 415
EPGL+VI++AVL SRAIFQRM+NY + + + +L L + F ++AI
Sbjct: 627 EPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLALIWKFDFSPFMVLIVAI 686
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 687 LNDGTIMTISKD 698
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1337 (475.7 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 272/432 (62%), Positives = 326/432 (75%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R YR PIAMPTVLSVTMAIGS +LS QG ITKRM+AI +MA
Sbjct: 263 MYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMA 322
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNLIE++ GV+ D V+L AARAS+VEN D IDAA+VGM
Sbjct: 323 GMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAARASRVENQDAIDAAMVGM 382
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+E+HFLPF+P KRTALT+IDS G HRV+KG+PEQIL+L + ++ + +
Sbjct: 383 LADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSKGAPEQILDLCNARADLRK 442
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V++ I+K+AERGLRSLAV+ Q VPE +KESSGSPW+F+G++PLFDPP HDSAETIRRAL
Sbjct: 443 RVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVLPLFDPPRHDSAETIRRAL 502
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAIAKETGRRLGMG+NMYPSS+L G+ +DE++ +PV++LIEKADGF
Sbjct: 503 DLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKDEAMAHIPVEDLIEKADGF 562
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ R HICGM G+GVNDAPALKK VLT
Sbjct: 563 AGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLT 622
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEF-IQVLELNFLFTLDT----VIAI 415
EPGL+VII+AVL SRAIFQRM+NY + + F ++ L + F +IAI
Sbjct: 623 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAI 682
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 683 LNDGTIMTISKD 694
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1301 (463.0 bits), Expect = 3.4e-156, Sum P(2) = 3.4e-156
Identities = 268/432 (62%), Positives = 316/432 (73%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQHR+YR PIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 265 MYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 324
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKLTVDKNLIE+F+ VD D V+L++ARAS+VEN D ID +IV M
Sbjct: 325 GMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSARASRVENQDAIDTSIVNM 384
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
L DPKEARA I EVHFLPF+P KRTA+TYID+ G+ HR +KG+PEQI+ L K + R
Sbjct: 385 LGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIELCDLKGETKR 444
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+ + +I+KFAERGLRSL VA Q VPE KES+G+PW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 445 RAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDSAETIRRAL 504
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAI KETGRRLGMGTNMYPSS+L +++D++ +PVDELIEKADGF
Sbjct: 505 DLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDDTTGGVPVDELIEKADGF 563
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIV+ LQ R HI GM G+GVNDAPALKK VLT
Sbjct: 564 AGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLT 623
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAI 415
EPGL+VI++AVL SRAIFQRM+NY + + L + E +F + +IAI
Sbjct: 624 EPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDFSPFMVLIIAI 683
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 684 LNDGTIMTISKD 695
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1300 (462.7 bits), Expect = 9.8e-146, Sum P(2) = 9.8e-146
Identities = 267/432 (61%), Positives = 314/432 (72%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
++ +Q R YR PIAMPTVLSVTMAIG+ RL+ QG ITKRM+AI +MA
Sbjct: 265 IYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHRLAQQGAITKRMTAIEEMA 324
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNLIE+F G+D D VLMAARA+++EN D ID AIV M
Sbjct: 325 GMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMAARAARLENQDAIDTAIVSM 384
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
L+DPKEARA I+E+HFLPF P +RTALTY+D EGKMHRV+KG+PE+IL++ HNK +I
Sbjct: 385 LSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVSKGAPEEILDMAHNKLEIKE 444
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV+A I+KFAERGLRSL +AYQEVP+G + G PW F+ L+PLFDPP HDSA+TI RAL
Sbjct: 445 KVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVALLPLFDPPRHDSAQTIERAL 504
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
LG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L + E + VDELIE ADGF
Sbjct: 505 HLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNNTEGV---SVDELIENADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ+R HICGM G+GVNDAPALKK VLT
Sbjct: 562 AGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARGASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-GLSSTEFIQVL----ELNFLFTLDTVIAI 415
EPGL+VII+AVL SRAIFQRM+NY + + + +L E +F + VIAI
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDFPPFMVLVIAI 681
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 682 LNDGTIMTISKD 693
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1337 (475.7 bits), Expect = 4.8e-144, Sum P(2) = 4.8e-144
Identities = 274/432 (63%), Positives = 320/432 (74%)
Query: 1 MFAIQHREYRTXXXXXXXXXXXXXPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
MF +QHR YR PIAMPTVLSVT+AIGS RLS QG ITKRM+AI +MA
Sbjct: 270 MFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMA 329
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLCCDKTGTLTLN LTVDKNLIE+F +D DT++L+A RAS++EN D IDAAIV M
Sbjct: 330 GMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDAIDAAIVSM 389
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADP+EARA+I+E+HFLPF+P KRTA+TYIDS+GK +R TKG+PEQ+LNL K++I +
Sbjct: 390 LADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLCQQKNEIAQ 449
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
+V A+I++FAE+GLRSLAVAYQE+PE S S G PW+F GL+PLFDPP HDS ETI RAL
Sbjct: 450 RVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDSGETILRAL 509
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
SLG+ VKMITGDQLAIAKETGRRLGMGTNMYPSS+L G + DE A+PVDELIE ADGF
Sbjct: 510 SLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EAIPVDELIEMADGF 568
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLT 360
AGVFPEHKYEIVK LQ H+ GM G+GVNDAPALKK VLT
Sbjct: 569 AGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIVLT 628
Query: 361 EPGLNVIITAVLISRAIFQRMRNYMVRGID-----GLSSTEFIQVLELNFLFTLDTVIAI 415
+PGL+VII+AVL SRAIFQRMRNY V + L T + E +F + +IAI
Sbjct: 629 DPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPPFMVLIIAI 688
Query: 416 LQ--TAFTSKKD 425
L T T KD
Sbjct: 689 LNDGTIMTISKD 700
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8354 | 0.7657 | 0.4052 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| AHA4 | AHA4; ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism; mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase ; The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity) (960 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| AVP1 | AVP1; ATPase/ hydrogen-translocating pyrophosphatase; Encodes a H(+)-translocating (pyrophospha [...] (770 aa) | • | • | 0.905 | |||||||
| AtPPa6 | AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase; En [...] (300 aa) | • | 0.899 | ||||||||
| AtPPa5 | AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5); inorganic diphosphatase/ pyrophosphatase; En [...] (216 aa) | • | 0.899 | ||||||||
| AtPPa4 | AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase; Encodes a soluble p [...] (216 aa) | • | 0.899 | ||||||||
| AtPPa3 | AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3); inorganic diphosphatase/ pyrophosphatase; En [...] (216 aa) | • | 0.899 | ||||||||
| AtPPa2 | AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2); inorganic diphosphatase/ pyrophosphatase; En [...] (218 aa) | • | 0.899 | ||||||||
| AVPL1 | vacuolar-type H+-translocating inorganic pyrophosphatase, putative; vacuolar-type H+-translocat [...] (802 aa) | • | 0.899 | ||||||||
| AtPPa1 | AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase; Encodes a soluble p [...] (212 aa) | • | 0.899 | ||||||||
| PER66 | peroxidase; encodes peroxidase involved in the lignification of tracheary elements (TE) in root [...] (322 aa) | • | 0.677 | ||||||||
| AT4G38510 | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump [...] (487 aa) | • | 0.599 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 508 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 7e-93 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-74 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-47 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-47 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-46 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-39 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-37 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-36 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-36 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-33 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 4e-30 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 7e-27 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-25 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-24 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-23 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-20 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-20 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-18 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 5e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 6e-13 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 7e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-07 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-06 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-05 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 2e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 564 bits (1455), Expect = 0.0
Identities = 226/422 (53%), Positives = 286/422 (67%), Gaps = 17/422 (4%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
+F + +R GL LVLL+GGIPIAMP VLSVTMA+G+ L+ + I R++AI ++A
Sbjct: 225 LFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELA 284
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMD+LC DKTGTLTLNKL++D+ L F G D D V+L AA AS+ E+ D ID A++G
Sbjct: 285 GMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGS 342
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIG 179
D KEAR + + F+PFDP KRT T D E GK +VTKG+P+ IL+L NK +I
Sbjct: 343 AKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIE 402
Query: 180 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 239
KV +++ A RG R+L VA W F+GL+PLFDPP HD+ ETI RA
Sbjct: 403 EKVEEKVDELASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERA 454
Query: 240 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 299
LG+ VKM+TGD LAIAKET RRLG+GTN+Y + L D + + + E++E ADG
Sbjct: 455 RHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADG 513
Query: 300 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 359
FA VFPEHKYEIV+ LQ R H+ GM G+GVNDAPALKKAD+GIAVA ATDAARSAADIVL
Sbjct: 514 FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVL 573
Query: 360 TEPGLNVIITAVLISRAIFQRMRNYMVRGIDG---LSSTEFIQVLELNFLFTLDTV--IA 414
TEPGL+VI+ A+L SR IFQRM++Y++ I + + +L LNF F V IA
Sbjct: 574 TEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIA 633
Query: 415 IL 416
IL
Sbjct: 634 IL 635
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 7e-93
Identities = 137/427 (32%), Positives = 202/427 (47%), Gaps = 54/427 (12%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLN 76
L L + +P +P V+++ +A+G++R++ I + ++AI + +DV+C DKTGTLT N
Sbjct: 303 LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQN 362
Query: 77 KLTVDKNLIEIFAGGVDADT-----------VVLMAARASQVE--------NLDVIDAAI 117
K+TV K I I GG D D +L AA + V D + A+
Sbjct: 363 KMTVKK--IYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGAL 420
Query: 118 V------GMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILN- 170
V G D + + +PFD KR ++ EGK KG+PE IL
Sbjct: 421 VEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILER 480
Query: 171 ------LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS----GSPWQFIG 220
L + R + + + A GLR LAVAY+++ K+ S F+G
Sbjct: 481 CKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLG 540
Query: 221 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD 280
L + DPP D E I G+ V MITGD + A + G+ + + G +
Sbjct: 541 LTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE 600
Query: 281 -----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 335
+E + EL+E+ FA V PE K IV+ LQ H+ M G+GVNDAPAL
Sbjct: 601 LDALSDEE------LAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPAL 654
Query: 336 KKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSS 394
K AD+GIA+ TDAA+ AADIVL + I+ AV+ R ++ ++ + I L S
Sbjct: 655 KAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF----ILYLLS 710
Query: 395 TEFIQVL 401
+VL
Sbjct: 711 KNVGEVL 717
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 4e-74
Identities = 116/374 (31%), Positives = 182/374 (48%), Gaps = 58/374 (15%)
Query: 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKT 70
L L++L+ +P A+P ++V +A+G RL+ +G++ + ++A+ ++ +D LC DKT
Sbjct: 189 KALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKT 248
Query: 71 GTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIV---GMLADPKEA 127
GTLT NK+T+ + I G D + ++ D ++ A++ ++ +
Sbjct: 249 GTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKSAELVGKADKG 304
Query: 128 RADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVIN 187
+ + + PF KR ++ +G KG+PE IL +N
Sbjct: 305 NKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN-------YEEKYL 357
Query: 188 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 247
+ A +GLR LA A +E+ + +F+GLI DP D+ ETI + G+ V
Sbjct: 358 ELARQGLRVLAFASKELEDD--------LEFLGLITFEDPLRPDAKETIEELKAAGIKVV 409
Query: 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307
MITGD + AK + LG+ D FA V PE
Sbjct: 410 MITGDNVLTAKAIAKELGI-------------------------------DVFARVSPEQ 438
Query: 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 367
K +IV+ LQ + HI M G+GVNDAPALKKAD+GIA+ A++AADIVL + L+ I
Sbjct: 439 KLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADIVLLDDDLSAI 493
Query: 368 ITAVLISRAIFQRM 381
+ AV R IF +
Sbjct: 494 VKAVKEGRKIFSNI 507
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 1e-47
Identities = 121/420 (28%), Positives = 191/420 (45%), Gaps = 69/420 (16%)
Query: 19 LLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKL 78
L + IP +P +++VT+A+G R+S + I +++ ++ + ++V+C DKTGTLT N +
Sbjct: 281 LAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHM 340
Query: 79 TVDK--------NLIEIFA----GGVDADTVVLMAARASQVENL---------------- 110
TV K ++ + G V D VL V +
Sbjct: 341 TVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA 400
Query: 111 -----DVIDAAIVGMLA-----DPKEARADIQEVHFLPFDPTGK--RTALTYIDSEGKMH 158
+ D A++ +L D +E + EV PF K + +M
Sbjct: 401 DTLLGNPTDVALIELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMC 457
Query: 159 RVTKGSPEQILNLLHNKSK-----------IGRKVNAVINKFAERGLRSLAVAYQEVPEG 207
+ KG+ EQ+L K + + A GLR +A A PE
Sbjct: 458 FM-KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEK 514
Query: 208 SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267
+ + F+GL+ + DPP E + ++ G+ + MITGD A RRLGM
Sbjct: 515 GQLT------FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP 568
Query: 268 TNMYPSSALSGQDRDE-SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326
S ++SG+ D L +++ K FA PEHK +IVK LQ R + M G
Sbjct: 569 --SKTSQSVSGEKLDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624
Query: 327 NGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 385
+GVNDAPALK ADIG+A+ TD A+ AAD++LT+ I++A+ + IF ++N++
Sbjct: 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFI 684
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 176 bits (447), Expect = 2e-47
Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 35/387 (9%)
Query: 21 IGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80
+G P +P +++ T+A G+ +LS Q VI KR+ AI + MD+LC DKTGTLT +K+ +
Sbjct: 330 VGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVL 389
Query: 81 DKNLIEIFAGGVDADTVVLMAARASQ----VENLDVIDAAIVGMLADPKEAR--ADIQEV 134
+ + +I G ++ V+ A S ++NL +D A++ + + + Q++
Sbjct: 390 ENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL--LDTAVLEGVDEESARSLASRWQKI 444
Query: 135 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG----------RKVNA 184
+PFD +R ++ ++ + KG+ E+ILN+ G R++
Sbjct: 445 DEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKR 504
Query: 185 VINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLIPLFDPPIHDSAETIRRALS 241
V + +GLR +AVA + +P + S G I DPP +A ++ +
Sbjct: 505 VTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKA 564
Query: 242 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL---IEKAD 298
G+ VK++TGD +A + +G+ L G D I L DEL E+
Sbjct: 565 SGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSD----IETLSDDELANLAERTT 616
Query: 299 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
FA + P HK IV L+ H+ G +G+G+NDAPAL+ ADIGI+V A D AR AADI+
Sbjct: 617 LFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADII 676
Query: 359 LTEPGLNVIITAVLISRAIFQRMRNYM 385
L E L V+ V+ R F M Y+
Sbjct: 677 LLEKSLMVLEEGVIEGRRTFANMLKYI 703
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 1e-46
Identities = 112/389 (28%), Positives = 192/389 (49%), Gaps = 31/389 (7%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLN 76
L + +G P +P ++S +A G+ +S + VI K +SAI + MD+LC DKTGTLT +
Sbjct: 291 LAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD 350
Query: 77 KLTVDKNLIEIFAGGVDADTVVLMA--ARASQVENLDVIDAAIVGMLAD--PKEARADIQ 132
K+ ++K+ I + G ++ V+ MA Q +V+D A++ L + ++ + +
Sbjct: 351 KIELEKH---IDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWK 407
Query: 133 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG----------RKV 182
+V +PFD +R ++ + + KG+ E++L + +K G ++
Sbjct: 408 KVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSEL 467
Query: 183 NAVINKFAERGLRSLAVAYQEVPEGSKESS---GSPWQFIGLIPLFDPPIHDSAETIRRA 239
+ + +G+R +AVA + + G + + G + DPP + E I
Sbjct: 468 QDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAAL 527
Query: 240 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL---IEK 296
G+ VK++TGD + + +G+ N L G D I L +EL + K
Sbjct: 528 FKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGAD----IEELSDEELARELRK 579
Query: 297 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 356
FA + P K I+ L+ H G +G+G+NDAPAL+KAD+GI+V A D A+ A+D
Sbjct: 580 YHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASD 639
Query: 357 IVLTEPGLNVIITAVLISRAIFQRMRNYM 385
I+L E L V+ V+ R F + Y+
Sbjct: 640 IILLEKSLMVLEEGVIEGRNTFGNILKYL 668
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 5e-39
Identities = 118/467 (25%), Positives = 196/467 (41%), Gaps = 111/467 (23%)
Query: 19 LLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLT---- 74
L + IP +P V++ +A+G+++++ + I +++ ++ + V+C DKTGTLT
Sbjct: 246 LAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305
Query: 75 --------------LNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE-----------N 109
LN+ V G + D V A E +
Sbjct: 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSS 365
Query: 110 LDV--------------------------IDAAIVGMLADPKEA-------RADIQEVHF 136
LD + A G+ + + A +++
Sbjct: 366 LDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLAT 425
Query: 137 LPFDPTGKRTALTYIDSEGKMHRV-TKGSPEQIL---NLLHNK--------SKIGRKVNA 184
L F R +++ + +++ KG+PE +L + N K+ + +
Sbjct: 426 LEFSRD--RKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILS 483
Query: 185 VINKFAER-GLRSLAVAYQEVPEGSKESSG----------SPWQFIGLIPLFDPP---IH 230
VI + LR LA+A++++P+ +E S FIG++ + DPP +
Sbjct: 484 VIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVA 543
Query: 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 290
D+ E R A G+ V MITGD A+ RR+G+ P ++ + S
Sbjct: 544 DAIEKCRTA---GIRVIMITGDNKETAEAICRRIGI---FSPDEDVTFK----SFTGREF 593
Query: 291 DELIEKADG--------FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 342
DE+ F+ V P HK E+V+ LQ + I M G+GVNDAPALKKADIGI
Sbjct: 594 DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGI 653
Query: 343 AVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN---YMV 386
A+ T+ A+ A+D+VL + I+ AV RAI+ M+ YM+
Sbjct: 654 AMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMI 700
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 1e-37
Identities = 113/386 (29%), Positives = 189/386 (48%), Gaps = 37/386 (9%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLN 76
L + +G P +P ++S +A G+ ++ + V+ KR++AI + MDVLC DKTGTLT +
Sbjct: 324 LAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQD 383
Query: 77 KLTVDKNLIEIFAGGVDADTVVLMA----ARASQVENLDVIDAAIV--GMLADPKEARAD 130
++ ++ +L G + V+ +A S ++NL +D A+V A
Sbjct: 384 RIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNL--MDQAVVAFAEGNPEIVKPAG 438
Query: 131 IQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIG----------R 180
++V LPFD +R ++ D++G+ + KG+ E++L + +
Sbjct: 439 YRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRE 498
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKE---SSGSPWQFI--GLIPLFDPPIHDSAET 235
++ A+ + G R L VA +E+P G S+ + G + DPP +A
Sbjct: 499 RLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPA 558
Query: 236 IRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL-- 293
I G+ VK++TGD + + R +G+ P L G + I A+ L
Sbjct: 559 IAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE----IEAMDDAALAR 610
Query: 294 -IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAAR 352
+E+ FA + P K ++K LQA H G +G+G+NDAPAL+ AD+GI+V D A+
Sbjct: 611 EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAK 670
Query: 353 SAADIVLTEPGLNVIITAVLISRAIF 378
+ADI+L E L V+ V+ R F
Sbjct: 671 ESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 5e-36
Identities = 101/368 (27%), Positives = 156/368 (42%), Gaps = 67/368 (18%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAI--GSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLT 74
L +L+ P A+ L+ AI G R + +G++ K A+ +A +D + DKTGTLT
Sbjct: 360 LAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 75 LNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEV 134
K V ++ A D D ++ +AA Q + AIV A+ + E
Sbjct: 418 EGKPEV----TDVVALDGDEDELLALAAALEQHSE-HPLAKAIVKAAAERGLPDVEDFEE 472
Query: 135 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGL 194
G+ +++E RV G+ LL + ++ I G
Sbjct: 473 I------PGRG-----VEAEVDGERVLVGNAR----LLGEEGIDLPLLSERIEALESEGK 517
Query: 195 RSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 254
+ VA + +G+I L D D+ E I +LG+ V M+TGD
Sbjct: 518 TVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564
Query: 255 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314
A+ + LG +DE+ A + PE K EIV+
Sbjct: 565 RTAEAIAKELG------------------------IDEV------RAELLPEDKAEIVRE 594
Query: 315 LQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374
LQA M+G+G+NDAPAL AD+GIA+ TD A AAD+VL L+ + A+ +S
Sbjct: 595 LQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLS 654
Query: 375 RAIFQRMR 382
RA + ++
Sbjct: 655 RATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 5e-36
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 73/373 (19%)
Query: 18 VLLIG---GIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLT 74
VL++ + +A P + V + + ++R G++ K A+ +A + + DKTGTLT
Sbjct: 203 VLVVACPCALGLATPVAILVAIGVAARR----GILIKGGDALEKLAKVKTVVFDKTGTLT 258
Query: 75 LNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEV 134
K TV IE ++ +L A A + + + AIV A + +
Sbjct: 259 TGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV--------RYAKKRGL 308
Query: 135 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL----NLLHNKSKIGRKVNAVINKFA 190
+ + + +G T E++ L + ++N+
Sbjct: 309 ELPK------QEDVEEVPGKGV--EATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGE 360
Query: 191 ERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL-SLGLGVKMI 249
+G + VA + +G+I L D ++ E I + G+ + M+
Sbjct: 361 SQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVML 407
Query: 250 TGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 309
TGD + A+ LG +DE+ A + PE K
Sbjct: 408 TGDNRSAAEAVAAELG------------------------IDEV------HAELLPEDKL 437
Query: 310 EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 369
IVK LQ + M+G+G+NDAPAL AD+GIA+ +D A AADIVL L+ + T
Sbjct: 438 AIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPT 497
Query: 370 AVLISRAIFQRMR 382
A+ +SR + ++
Sbjct: 498 AIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 6e-33
Identities = 94/356 (26%), Positives = 146/356 (41%), Gaps = 69/356 (19%)
Query: 27 AMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE 86
A PTV++V + +K GV+ K A+ A +D + DKTGTLT K TV +
Sbjct: 253 ATPTVIAVATGLAAKN----GVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVH 306
Query: 87 IFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRT 146
+F + + L AA + E+ + AIV + + + +P G
Sbjct: 307 VFGESDRDELLALAAALEAGSEH--PLAKAIVSYAKAKGITLSQVSDFKAIP----GIGV 360
Query: 147 ALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE 206
T EG ++ G+ + L N K +V L E+
Sbjct: 361 EGTV---EGHTIQL--GNEKL---LGENGLKTDGEVEEGGGT-----TSVLVAVNGEL-- 405
Query: 207 GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 266
G++ L D ++ E I+ G+ M+TGD AK + LG
Sbjct: 406 ------------AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG- 452
Query: 267 GTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326
IE + A V P+ K ++K LQ + + M+G
Sbjct: 453 ---------------------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVG 483
Query: 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 382
+G+NDAPAL +AD+GIA+ TD A AAD+VL LN + TA+ +SR +R++
Sbjct: 484 DGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 4e-30
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 67/433 (15%)
Query: 7 REYRTGLNNLLVLLIGGIPIAMPTVL--SVTMAI--GSKRLSLQGVITKRMSAIVDMAGM 62
E + ++ + + +A+P L +VT+A+ K++ + + ++A M
Sbjct: 319 EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSA 378
Query: 63 DVLCCDKTGTLTLNKLTVDKNLI-EIFAGGVDADTVVLMAARASQVENLDV--------- 112
+C DKTGTLT N ++V + I E D V R VE + +
Sbjct: 379 TAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVD 438
Query: 113 -----------IDAAIVGM----LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKM 157
+ A++ L D +E RA+ + V PF+ K ++ S GK
Sbjct: 439 RGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKY 498
Query: 158 HRVTKGSPEQILNLLHNK------SKIGRK-----VNAVINKFAERGLRSLAVAY----- 201
KG+ E +L + + VI A LR++ +AY
Sbjct: 499 REFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAP 558
Query: 202 QEVPEGSKESSGSPWQFIGLIPLFDP---PIHDSAETIRRALSLGLGVKMITGDQLAIAK 258
+E P + G IG++ + DP + ++ + +RA G+ V+M+TGD + AK
Sbjct: 559 EEFPRKDYPNKG--LTLIGVVGIKDPLRPGVREAVQECQRA---GITVRMVTGDNIDTAK 613
Query: 259 ETGRRLGMGTNMYPSSALSGQD-----RDESIVALPVDELIEKADGFAGVFPEHKYEIVK 313
R G+ T + A+ G++ +E LP K A P K +V
Sbjct: 614 AIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP------KLRVLARSSPLDKQLLVL 665
Query: 314 HLQARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAADIVLTEPGLNVIITAVL 372
L+ + + G+G NDAPALK AD+G ++ + T+ A+ A+DI+L + I+ AV
Sbjct: 666 MLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 725
Query: 373 ISRAIFQRMRNYM 385
R ++ +R ++
Sbjct: 726 WGRNVYDNIRKFL 738
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 7e-27
Identities = 115/465 (24%), Positives = 193/465 (41%), Gaps = 113/465 (24%)
Query: 16 LLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTL 75
L+ +++ +P + ++V + + +KR++ + + K + A+ + +C DKTGTLT
Sbjct: 298 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 357
Query: 76 NKLTV-----DKNLIEIFAGGVDADT---------------------VVLMAARA---SQ 106
N++TV D + E ADT + + RA +
Sbjct: 358 NRMTVAHMWFDNQIHE-------ADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAG 410
Query: 107 VENLDVIDAAIVG-------------MLADPKEARADIQEVHFLPFDPTGKR--TALTYI 151
EN+ ++ A+ G L E R +V +PF+ T K +
Sbjct: 411 QENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENE 470
Query: 152 DSEGKMH-RVTKGSPEQILN-----LLHNKSK-IGRKVNAVINK-------FAER--GLR 195
D H V KG+PE+IL L+H K + + ++ ER G
Sbjct: 471 DPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFC 530
Query: 196 SLAVAYQEVPEGSK---ESSGSPWQ---FIGLIPLFDPPIHDSAETIRRALSLGLGVKMI 249
L + ++ PEG + + P F+GLI + DPP + + + S G+ V M+
Sbjct: 531 HLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMV 590
Query: 250 TGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVA---LPVDELIEKADG------- 299
TGD AK + +G+ + G + E I A +PV ++ +
Sbjct: 591 TGDHPITAKAIAKGVGIIS--------EGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642
Query: 300 ---------------------FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 338
FA P+ K IV+ Q + I + G+GVND+PALKKA
Sbjct: 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 702
Query: 339 DIGIAVADA-TDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 382
DIG+A+ A +D ++ AAD++L + I+T V R IF ++
Sbjct: 703 DIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 747
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-25
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 123 DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV-TKGSPEQILNLLHN-KSKIGR 180
+ K A + + PFD KR A Y D+ G+ + + KG+ E+I+ + K G
Sbjct: 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGV 576
Query: 181 KVN-----------AVINKFAERGLRSLAVAYQEVPEG------------SKESSGSPWQ 217
K++ A + A GLR LA A + + ++ ++ S +
Sbjct: 577 KISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLE 636
Query: 218 FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSS-- 274
F+GLI ++DPP ++SA + + G+ V M+TGD AK + +G + N
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 275 -----ALSGQD----RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 325
++G DE + L L+ A P+ K ++++ L R C M
Sbjct: 697 IMDSMVMTGSQFDALSDEEVDDLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMT 751
Query: 326 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNY 384
G+GVND+P+LK A++GIA+ + +D A+ A+DIVL++ I+ A+ R +F + +
Sbjct: 752 GDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKF 811
Query: 385 MVR 387
++
Sbjct: 812 VLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-24
Identities = 100/438 (22%), Positives = 167/438 (38%), Gaps = 105/438 (23%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAG-MDVLCCDKTGTLTL 75
L ++ +P A+P LS+ + RL +G+ I + AG +DV C DKTGTLT
Sbjct: 403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRI-NFAGKIDVCCFDKTGTLTE 461
Query: 76 NKLTV--------DKNLIEIF---AGGVDADTVVLMAARAS--QVEN------LDVIDAA 116
+ L + ++ ++I + + T +A S ++E LD
Sbjct: 462 DGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFE 521
Query: 117 IVG------------------MLADPKEARADIQEVHFLPFDPTGKRTA-LTYIDSEGKM 157
G + D I + F +R + + + E
Sbjct: 522 ATGWTLEEDDESAEPTSILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERSP 579
Query: 158 HRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVP--------EGSK 209
KG+PE I +L + V+ + G R LA+AY+E+P + S+
Sbjct: 580 DAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSR 638
Query: 210 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETG---- 261
++ S F+G I +P D+ E I+ + MITGD +A+E G
Sbjct: 639 DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNP 698
Query: 262 -RRLGMGTNMYPSSALS------------------------GQDRDESIVALP------- 289
L + P S GQD E ++A
Sbjct: 699 SNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSG 758
Query: 290 -------------VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
+ L+ FA + P+ K +V+ LQ ++ GM G+G ND ALK
Sbjct: 759 KAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALK 818
Query: 337 KADIGIAVADATDAARSA 354
+AD+GI++++A +A+ +A
Sbjct: 819 QADVGISLSEA-EASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 9e-23
Identities = 96/360 (26%), Positives = 149/360 (41%), Gaps = 81/360 (22%)
Query: 16 LLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAG-MDVLCCDKTGTLT 74
L+ LL+ IP + +LS G R++ VI A V+ AG +D L DKTGT+T
Sbjct: 253 LVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRA-VEAAGDVDTLLLDKTGTIT 311
Query: 75 L-NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLD-----VIDAAIVGMLADPKEAR 128
L N+ + I GV + + A AS + V A +G+
Sbjct: 312 LGNRQASEF----IPVPGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELR---ED 364
Query: 129 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVIN 187
F+PF +T ++ +D G + KG+ + I + I ++A ++
Sbjct: 365 DLQSHAEFVPFT---AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVD 420
Query: 188 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PPIHDSAETIRRALSLGL 244
+ + G L V E + +G+I L D P I + +R+ +
Sbjct: 421 EVSRLGGTPLVVV-----ENGR--------ILGVIYLKDIVKPGIKERFAELRK-----M 462
Query: 245 GVK--MITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 298
G+K MITGD AIA E G VD+ I +A
Sbjct: 463 GIKTVMITGDNPLTAAAIAAEAG----------------------------VDDFIAEAT 494
Query: 299 GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
PE K +++ QA + M G+G NDAPAL +AD+G+A+ T AA+ AA++V
Sbjct: 495 ------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 1e-20
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 36/175 (20%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAIAKETGRRLGMGTNMYPSSA 275
++G I L D P D+AE I +LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 276 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 335
+DE+ A + PE K EIVK L+ + M+G+G+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 336 KKADIGIAV-ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 389
AD+GIA+ A +D A AD+VL L+ + A+ ++R R R + + +
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLAR----RTRRIVKQNV 492
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 94.1 bits (235), Expect = 3e-20
Identities = 100/377 (26%), Positives = 156/377 (41%), Gaps = 116/377 (30%)
Query: 16 LLVLLIGGIPIAMPTVLSVTMAIG---SKRLSLQGVITKRMSAIVDMAG-MDVLCCDKTG 71
L+ LL+ IP + +LS AIG R+ VI A V+ AG +D L DKTG
Sbjct: 252 LVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRA-VEAAGDVDTLLLDKTG 307
Query: 72 TLTL-NKLTVDKNLIEIF--AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP---- 124
T+TL N+ + F GV + ++ DAA + LAD
Sbjct: 308 TITLGNRQASE------FLPVPGVTEE---------------ELADAAQLSSLADETPEG 346
Query: 125 -------------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNL 171
+E F+PF +T ++ +D +G + KG+ + I
Sbjct: 347 RSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRY 401
Query: 172 LH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---P 227
+ N +++A +++ A +G L VA E ++ +G+I L D P
Sbjct: 402 VESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR--------VLGVIYLKDIVKP 448
Query: 228 PIHDSAETIRRALSLGLGVK--MITGD-QL---AIAKETGRRLGMGTNMYPSSALSGQDR 281
I + +R+ +G+K MITGD L AIA E G
Sbjct: 449 GIKERFAELRK-----MGIKTVMITGDNPLTAAAIAAEAG-------------------- 483
Query: 282 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341
VD+ + +A PE K +++ QA + M G+G NDAPAL +AD+G
Sbjct: 484 --------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 529
Query: 342 IAVADATDAARSAADIV 358
+A+ T AA+ A ++V
Sbjct: 530 VAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 8e-20
Identities = 100/367 (27%), Positives = 152/367 (41%), Gaps = 78/367 (21%)
Query: 26 IAMPTVLSVT--MAI--GSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVD 81
IA P L + M+I G R + GV+ + A+ + +D L DKTGTLT K V
Sbjct: 477 IACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVV 536
Query: 82 KNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPF-D 140
++ F GVD + +AA Q + + ARA + + +
Sbjct: 537 A--VKTF-NGVDEAQALRLAAALEQGSSHPL--------------ARAILDKAGDMTLPQ 579
Query: 141 PTGKRT-ALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAV 199
G RT + E + H + G+ LL+ + + + A I A +G + +
Sbjct: 580 VNGFRTLRGLGVSGEAEGHALLLGNQ----ALLNEQQVDTKALEAEITAQASQGATPVLL 635
Query: 200 AYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL----A 255
A + L+ + DP DS ++R G + M+TGD A
Sbjct: 636 AVDG-------------KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682
Query: 256 IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHL 315
IAKE G +DE+I AGV P+ K E +K L
Sbjct: 683 IAKEAG----------------------------IDEVI------AGVLPDGKAEAIKRL 708
Query: 316 QARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 375
Q++ M+G+G+NDAPAL +AD+GIA+ +D A A I L L + A+ ISR
Sbjct: 709 QSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISR 768
Query: 376 AIFQRMR 382
A + M+
Sbjct: 769 ATLRNMK 775
|
Length = 834 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 2e-18
Identities = 95/352 (26%), Positives = 148/352 (42%), Gaps = 66/352 (18%)
Query: 16 LLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTL 75
L+ LL+ IP + +LS G R+ VI A+ +D L DKTGT+TL
Sbjct: 253 LVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITL 312
Query: 76 -NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEV 134
N+L + I A GVD T+ A AS + D + + +LA R D +
Sbjct: 313 GNRLASEF----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQS 366
Query: 135 HFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERG 193
F +T ++ I+ + + KG+ + I + N I ++ +++ A +G
Sbjct: 367 LHATFVEFTAQTRMSGINLDNG-RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQG 425
Query: 194 LRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD---PPIHDSAETIRRALSLGLGVKMIT 250
L V E ++ G+I L D I + +R+ +G+ MIT
Sbjct: 426 GTPLVVC-----EDNR--------IYGVIYLKDIVKGGIKERFAQLRK---MGIKTIMIT 469
Query: 251 GDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306
GD AIA E G VD+ I +A PE
Sbjct: 470 GDNRLTAAAIAAEAG----------------------------VDDFIAEAT------PE 495
Query: 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
K +++ QA + M G+G NDAPAL +AD+G+A+ T AA+ AA++V
Sbjct: 496 DKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 5e-13
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
+GLI L D D+ + I +LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
D AG+ PE K + V L + M+G+G+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 376
A IGIA+ TD A AD LT L + + +SRA
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 70.9 bits (173), Expect = 6e-13
Identities = 79/374 (21%), Positives = 147/374 (39%), Gaps = 60/374 (16%)
Query: 16 LLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTL 75
L+ L + IP + +LS G R++ ++ K ++ ++VL DKTGT+T
Sbjct: 252 LIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311
Query: 76 NKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVH 135
++ + ++ AA S + + D + + LA + +
Sbjct: 312 G----NRMADAFIPVKSSSFERLVKAAYESSIAD-DTPEGRSIVKLAYKQHIDLPQEVGE 366
Query: 136 FLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGL 194
++PF + + + + E V KG+P ++ + I ++A++ +++G
Sbjct: 367 YIPFTAETRMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGG 421
Query: 195 RSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 254
L V +G+I L D E R +G+ M TGD
Sbjct: 422 TPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNE 468
Query: 255 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314
A + G VD + + PE K +++
Sbjct: 469 LTAATIAKEAG------------------------VDRFVAECK------PEDKINVIRE 498
Query: 315 LQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374
QA+ HI M G+G NDAPAL +A++G+A+ T +A+ AA+++ + ++ VLI
Sbjct: 499 EQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIG 558
Query: 375 RAIFQRMRNYMVRG 388
+ + M RG
Sbjct: 559 KQLL------MTRG 566
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 7e-09
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 280 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 339
DR S+V L I FAG PE K +I++ L+ R M+GNG ND AL++AD
Sbjct: 54 DRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREAD 113
Query: 340 IGIAV---ADATDAARSAADIVLTEPGLNVIITA 370
+GI + AD+VL E + +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 8e-07
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 219 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG 278
+GLI L DP + E ++ G+ + ++TGD A R LG+ + +S
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSA 140
Query: 279 QDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 338
V P ++ E A ++ L + M+G+GVND PA K A
Sbjct: 141 DLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 339 D 339
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 24 IPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKL 78
IP ++ VLS+TMA+G+ +S + VI +++ A+ + ++ +C DKTGT+T K+
Sbjct: 321 IPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAI 56
+ ++ L L +L+ P A+P + + +A+G+ RL+ +G++ K +SA+
Sbjct: 168 FRGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSAL 220
|
Length = 222 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 362
IG+ ND + A G+AVA+A + + AAD V +
Sbjct: 179 IGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 291 DELIEKADGFAG------VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADI 340
+ L + G V +K + + L + I +G+G ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 341 GIAVADATDAARSAADIVLTEPGL 364
GIA +A + ADI + + L
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDL 212
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 324 MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
G+G+ND L+ A G+A+ +A + ++ AD V
Sbjct: 209 AFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
G+G ND L+ A +G+A+ +A+ ++AAD V
Sbjct: 208 FGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.95 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.66 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.14 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.1 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.08 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.05 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.04 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.03 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.97 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.97 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.96 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.93 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.93 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.92 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.89 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.83 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.82 | |
| PLN02887 | 580 | hydrolase family protein | 98.81 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.76 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.69 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.68 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.67 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.65 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.64 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.59 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.59 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.57 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.51 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.46 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.41 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.38 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.36 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.27 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.19 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.18 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.15 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.12 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.1 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.05 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.96 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.95 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.86 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.82 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.8 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.79 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.75 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.7 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.69 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.68 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.62 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.59 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.56 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.49 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.48 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.48 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.48 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.45 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.44 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.33 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.3 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.29 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.25 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.21 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.17 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.16 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.11 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.05 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.05 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.98 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.98 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.97 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.95 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.93 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.89 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.85 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.83 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.82 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.74 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.68 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.66 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.62 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.61 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.57 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.53 | |
| PLN02940 | 382 | riboflavin kinase | 96.5 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.3 | |
| PLN02811 | 220 | hydrolase | 96.27 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.25 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.21 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.12 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.11 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.09 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.01 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.99 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.94 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.89 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.86 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.84 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.77 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.59 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 95.21 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.16 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.99 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.88 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.81 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.64 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.61 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.43 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.29 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.21 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.13 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.72 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.68 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.6 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 93.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.19 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.06 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 92.18 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.63 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 90.05 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 88.34 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.0 | |
| PLN02423 | 245 | phosphomannomutase | 87.47 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 87.27 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 86.55 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 85.69 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 85.62 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 84.87 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 84.86 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 83.44 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.74 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 80.36 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 80.25 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.05 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 80.03 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-107 Score=828.05 Aligned_cols=498 Identities=75% Similarity=1.106 Sum_probs=477.9
Q ss_pred CcccccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 1 ~~~~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
||+++++.|+.++.++++++|+++|.|||++++++|++|+++|+++|+++|+++|+|+|+++|++|+|||||||.|+++|
T Consensus 266 my~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSv 345 (942)
T KOG0205|consen 266 MYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 345 (942)
T ss_pred hhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceec
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
++..++.+..+.++|.+++.|+++++.+|+|++|+|++++++||++++.+|++++|+||||.+||.+.+|.+++|+++++
T Consensus 346 dknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~ 425 (942)
T KOG0205|consen 346 DKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRV 425 (942)
T ss_pred CcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
+||+|++|++.|+.+.++++++++.+++|+++|+|.|+||++.+|+..+++.+.+|+|+|++++.||||+++.++|++..
T Consensus 426 sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 426 SKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred cCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
..|+.|.|+|||....++++++++|+.+|++++..+.|...++.+...++++++++++.||.+.|+||+++|+.||++||
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~h 585 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKH 585 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDG--------- 391 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~--------- 391 (508)
.|+|+|||+||+|+||+||+|||+.+++|+|+.++|||+++++++.|+.++..||.+|+||++|.+|++..
T Consensus 586 i~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfm 665 (942)
T KOG0205|consen 586 IVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFM 665 (942)
T ss_pred eecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887721
Q ss_pred --------------------------------------------------------------------------------
Q 010523 392 -------------------------------------------------------------------------------- 391 (508)
Q Consensus 392 -------------------------------------------------------------------------------- 391 (508)
T Consensus 666 l~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f 745 (942)
T KOG0205|consen 666 LIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTF 745 (942)
T ss_pred HHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHHHHHHhhhhcccccccccc
Confidence
Q ss_pred -----------HHHHHHHHHhh----------------------------------------------------------
Q 010523 392 -----------LSSTEFIQVLE---------------------------------------------------------- 402 (508)
Q Consensus 392 -----------~~~~i~~~~~~---------------------------------------------------------- 402 (508)
+++++|+++++
T Consensus 746 ~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~g 825 (942)
T KOG0205|consen 746 GVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAG 825 (942)
T ss_pred ceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeee
Confidence 55555555555
Q ss_pred ------ccccccHHHHHHH---------------HHhhcccccccchhHHHHHHHHhhcccccCCCCCCccccccccccc
Q 010523 403 ------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGE 461 (508)
Q Consensus 403 ------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~ 461 (508)
+..|+|++.+.+. ...+|++...||.++++++|+..||++||++++++ +|
T Consensus 826 viw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~~---------~~ 896 (942)
T KOG0205|consen 826 VIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEG---------RE 896 (942)
T ss_pred eEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCcc---------ch
Confidence 4578888888875 24567778899999999999999999999999951 68
Q ss_pred cchhHHHHHhhhhHHhhhhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 462 LSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 462 ~~~~~~~~~rr~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
+|+++||++||+|++||||+||||||+|||+||||+|+++| |||||
T Consensus 897 ~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 897 LSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 99999999999999999999999999999999999999999 99997
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-82 Score=712.12 Aligned_cols=445 Identities=30% Similarity=0.448 Sum_probs=382.0
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|.+.+..++++.++++|++||+.++++++.|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.++++..
T Consensus 294 ~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~ 373 (917)
T COG0474 294 GLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING 373 (917)
T ss_pred cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999988752
Q ss_pred ccCCCC---------hHHHHHHHHHhcccC--------CCChHHHHHHhhhcCc------hhhhccceEEEEecCCCCCc
Q 010523 88 FAGGVD---------ADTVVLMAARASQVE--------NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGK 144 (508)
Q Consensus 88 ~~~~~~---------~~~~l~~aa~~~~~~--------~~~~~~~ai~~~~~~~------~~~~~~~~~~~~~pf~~~~k 144 (508)
.....+ ...++..++.|+... ..||.|.|++.++.+. ...+..+++++++||+|.+|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rK 453 (917)
T COG0474 374 GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERK 453 (917)
T ss_pred CcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCce
Confidence 111111 113566677776432 3589999999988643 23344556799999999999
Q ss_pred eEEEEEEecCCeEEEEEcCcHHHHHhhhcC-------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc----cCCC
Q 010523 145 RTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK----ESSG 213 (508)
Q Consensus 145 r~s~~~~~~~g~~~~~~kGa~e~il~~~~~-------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~----~~~e 213 (508)
||++++++.+|+++.++|||||.|+++|.. .++..+.+.+..++|+++|||++++||+.++..+. +..|
T Consensus 454 rMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E 533 (917)
T COG0474 454 RMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIE 533 (917)
T ss_pred EEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhh
Confidence 999999987888999999999999999973 45677889999999999999999999998765544 5789
Q ss_pred CCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHH
Q 010523 214 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 293 (508)
Q Consensus 214 ~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (508)
+++.|+|+++++||||++++++|+.|+++||+|||+||||..||+++|++||+..+.....+++|.+.+...++ ++.+.
T Consensus 534 ~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~ 612 (917)
T COG0474 534 SDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-ELAEL 612 (917)
T ss_pred ccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999766444557777776644333 66778
Q ss_pred hhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 294 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 294 ~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+++..+|||++|+||.++|+.||++|+.|+|+|||+||+||||+|||||||+ +|+|+||++||+++++++|..+..+|+
T Consensus 613 ~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~ 692 (917)
T COG0474 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVV 692 (917)
T ss_pred hhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999999999999 699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 373 ISRAIFQRMRNYMVRGIDGLSSTE-FIQVLELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 373 ~~R~~~~~i~~~~~~~~~~~~~~i-~~~~~~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
+||++|+|++|++.|.+..+...+ +..+..++ .+.|+.++|++ ++++++.+|++.++.+++.++.|.++|++...+
T Consensus 693 eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~ 772 (917)
T COG0474 693 EGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEG 772 (917)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCcccc
Confidence 999999999999999998665533 33333333 24799999999 777788999999999989999999996644443
Q ss_pred CCcccccc
Q 010523 449 DTSMFSVR 456 (508)
Q Consensus 449 ~~~~~~~~ 456 (508)
+|+.+
T Consensus 773 ---i~~~~ 777 (917)
T COG0474 773 ---LFNRK 777 (917)
T ss_pred ---ccchh
Confidence 56433
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-80 Score=648.13 Aligned_cols=441 Identities=26% Similarity=0.398 Sum_probs=367.8
Q ss_pred ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeee
Q 010523 7 REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE 86 (508)
Q Consensus 7 ~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~ 86 (508)
+.+.+-+..++++-+++||++||.++++++|.|.+||+|++++||++.++|+||.+++||+|||||||+|+|+|.+.|+.
T Consensus 277 k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~ 356 (972)
T KOG0202|consen 277 KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIP 356 (972)
T ss_pred hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEec
Confidence 34445577889999999999999999999999999999999999999999999999999999999999999999998762
Q ss_pred ccc-----------CCC------------------Ch---HHHHHHHHHhcccC-----------CCChHHHHHHhhhcC
Q 010523 87 IFA-----------GGV------------------DA---DTVVLMAARASQVE-----------NLDVIDAAIVGMLAD 123 (508)
Q Consensus 87 ~~~-----------~~~------------------~~---~~~l~~aa~~~~~~-----------~~~~~~~ai~~~~~~ 123 (508)
... .++ +. .+++.+++.|+... ...|.+.|+..++..
T Consensus 357 ~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeK 436 (972)
T KOG0202|consen 357 DGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEK 436 (972)
T ss_pred ccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHH
Confidence 210 001 11 23445555554211 234677777655421
Q ss_pred c-----h---h-----------hhccceEEEEecCCCCCceEEEEEEecCCe--EEEEEcCcHHHHHhhhc---------
Q 010523 124 P-----K---E-----------ARADIQEVHFLPFDPTGKRTALTYIDSEGK--MHRVTKGSPEQILNLLH--------- 173 (508)
Q Consensus 124 ~-----~---~-----------~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~--~~~~~kGa~e~il~~~~--------- 173 (508)
- . . ....++.+..+||++.+|+|++.+.+..|+ ...|.|||+|.++++|+
T Consensus 437 m~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~ 516 (972)
T KOG0202|consen 437 MGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQT 516 (972)
T ss_pred cCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCce
Confidence 1 0 0 112334568999999999999999986664 68899999999999994
Q ss_pred ---CChhHHHHHHHHHHHHHHccCeeEEEEeeecCC-----------CCccCCCCCcEEEEEeccCCCCCcchHHHHHHH
Q 010523 174 ---NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE-----------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRA 239 (508)
Q Consensus 174 ---~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~-----------~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l 239 (508)
.++..++.+.+...+++++|||||++|+++.+. ..+...|++|+|+|++++.||||++++++|+.|
T Consensus 517 ~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c 596 (972)
T KOG0202|consen 517 KVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELC 596 (972)
T ss_pred eeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHH
Confidence 234567889999999999999999999997763 124567899999999999999999999999999
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhh
Q 010523 240 LSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA 317 (508)
Q Consensus 240 ~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~ 317 (508)
+++||+|+|+|||+.+||++||+++|+..+.. ....++|++.++ +...+.++...+..+|+|++|.||.+||+.||+
T Consensus 597 ~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~ 675 (972)
T KOG0202|consen 597 RQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQS 675 (972)
T ss_pred HHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHh
Confidence 99999999999999999999999999976543 456777777663 334455677888899999999999999999999
Q ss_pred cCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 318 RNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTE 396 (508)
Q Consensus 318 ~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i 396 (508)
+|.+|+|+|||+||+||||.|||||||| +|+++||+|||+||.||||+.|+.||++||.+|.||++|+.|.+..+...+
T Consensus 676 ~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 676 RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred cCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999999999 899999999999999999999999999999999999999999998655444
Q ss_pred -HHHHhhcc-ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 397 -FIQVLELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 397 -~~~~~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
+++++..+ .-.||.++|+| .++..+.+|.-++|.++...++|.||||....|
T Consensus 756 ~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~ 810 (972)
T KOG0202|consen 756 VLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDG 810 (972)
T ss_pred HHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCC
Confidence 44455544 45899999999 455556999999999999999999999977665
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-81 Score=655.79 Aligned_cols=485 Identities=21% Similarity=0.310 Sum_probs=411.0
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
+-+...+.++++++|++||+++++++|+++++|.+++.+||+++|||+||+.++||+|||||||+|+|+|.+.|+....+
T Consensus 384 ~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~ 463 (1034)
T KOG0204|consen 384 KFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHY 463 (1034)
T ss_pred HHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccc
Confidence 44555566788999999999999999999999999999999999999999999999999999999999999988633211
Q ss_pred C--------CChHH--HHHH-HHHhccc-------------CCCChHHHHHHhhhc----CchhhhccceEEEEecCCCC
Q 010523 91 G--------VDADT--VVLM-AARASQV-------------ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPT 142 (508)
Q Consensus 91 ~--------~~~~~--~l~~-aa~~~~~-------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~ 142 (508)
. .++.. ++.. .+..+.. -..+|.++|++++.. +....|...+..+++||||.
T Consensus 464 k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~ 543 (1034)
T KOG0204|consen 464 KVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSV 543 (1034)
T ss_pred cccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcc
Confidence 1 22211 1111 1111100 123688999998753 44455677789999999999
Q ss_pred CceEEEEEEecCCeEEEEEcCcHHHHHhhhcC-----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC---
Q 010523 143 GKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS--- 208 (508)
Q Consensus 143 ~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~--- 208 (508)
+|+|+++++.++|..+.++|||.|.++..|.. +++....++..++.|+.+|||++|+||+++.+..
T Consensus 544 kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~ 623 (1034)
T KOG0204|consen 544 KKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEE 623 (1034)
T ss_pred cceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCC
Confidence 99999999987776349999999999999962 3445568999999999999999999999864331
Q ss_pred -----ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhh
Q 010523 209 -----KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDE 283 (508)
Q Consensus 209 -----~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~ 283 (508)
.+.++.+++++|+++++||.|||++++|+.|+++||.|.|+||||..||++||.+|||.+.......+.|.+..
T Consensus 624 ~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr- 702 (1034)
T KOG0204|consen 624 PSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR- 702 (1034)
T ss_pred CCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-
Confidence 13457899999999999999999999999999999999999999999999999999998776666777777766
Q ss_pred hhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCC
Q 010523 284 SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEP 362 (508)
Q Consensus 284 ~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~ 362 (508)
.+.+.+.++++.+..++||.+|.+|.-+|+.|+.+|++|+++|||.||+|||++||||.||| .|+++||++|||||+||
T Consensus 703 ~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DD 782 (1034)
T KOG0204|consen 703 ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDD 782 (1034)
T ss_pred hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcC
Confidence 45566778899999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhh
Q 010523 363 GLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE--LNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQ 439 (508)
Q Consensus 363 ~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 439 (508)
||++|+.++.|||.+|.||+||++|.++.+..|+...+.. ...-.||..+|+| .++++.....+++..|++...+|.
T Consensus 783 NFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~ 862 (1034)
T KOG0204|consen 783 NFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMK 862 (1034)
T ss_pred chHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhc
Confidence 9999999999999999999999999997665555444433 2367999999999 788999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 440 RTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 440 ~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
|+|+|...| +-.+++++.+- -+...||--+-.|+..-++..-+.+.+...-.+|||+
T Consensus 863 RkP~GR~~~----LIt~tMwknil--------~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTi 919 (1034)
T KOG0204|consen 863 RKPVGRTKP----LITRTMWKNIL--------GQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTI 919 (1034)
T ss_pred CCCCCCCCc----chHHHHHHHHH--------HHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheee
Confidence 999999999 55788888777 7888999999999999998887777776544556653
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-77 Score=669.88 Aligned_cols=435 Identities=26% Similarity=0.412 Sum_probs=370.8
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+++|.+++.+++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+
T Consensus 312 ~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~ 391 (903)
T PRK15122 312 TKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL 391 (903)
T ss_pred ccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred eecccCCCChHHHHHHHHHhcc--cCCCChHHHHHHhhhcCch--hhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 85 IEIFAGGVDADTVVLMAARASQ--VENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 85 i~~~~~~~~~~~~l~~aa~~~~--~~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
. ..+.+.++++.+++.++. ....||++.|++.++.... ..+..++.++++||++.+|+|++++++.+|+++.+
T Consensus 392 ~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~ 468 (903)
T PRK15122 392 D---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLI 468 (903)
T ss_pred c---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEE
Confidence 2 123345667777665432 2235799999999875432 12345788899999999999999988777888999
Q ss_pred EcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-----cCCCCCcEEEEEeccC
Q 010523 161 TKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-----ESSGSPWQFIGLIPLF 225 (508)
Q Consensus 161 ~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-----~~~e~~l~~lG~i~l~ 225 (508)
+||+||.++++|.. +++..+++.+..++++.+|+|++++||++++..+. +..|++++|+|+++++
T Consensus 469 ~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~ 548 (903)
T PRK15122 469 CKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFL 548 (903)
T ss_pred ECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEecc
Confidence 99999999999962 22345667888899999999999999998865321 2357899999999999
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
||||++++++|++|+++||+|+|+|||+..+|.++|+++||.. ..+++|.+.+. ++..++.+.+++..+|||++|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sP 623 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTP 623 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCH
Confidence 9999999999999999999999999999999999999999953 34566666543 344467778888999999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 385 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~ 385 (508)
+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|+.|+.++++||++|+||+||+
T Consensus 624 e~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i 703 (903)
T PRK15122 624 LQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL 703 (903)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-h-hccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 386 VRGIDGLSSTEFIQV-L-ELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 386 ~~~~~~~~~~i~~~~-~-~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
.|.+..++..++..+ . .+..++|+.++|+||..+++-.+.++++.+++..+.| |+|+....+
T Consensus 704 ~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m-~~P~~~~~~ 767 (903)
T PRK15122 704 NMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFL-RKPRKWDAK 767 (903)
T ss_pred HHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhc-CCCCCCChh
Confidence 999976554443322 2 2335589999999966666656899999999999999 999755444
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-77 Score=670.38 Aligned_cols=432 Identities=27% Similarity=0.427 Sum_probs=370.8
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+++|.+++..++++++++|||+||++++++++.|+++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+.
T Consensus 313 ~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~ 392 (902)
T PRK10517 313 YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENH 392 (902)
T ss_pred HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred eeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHhhhcCch--hhhccceEEEEecCCCCCceEEEEEEecCCeEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 159 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~ 159 (508)
+ . ..+.+.++++..++.++.. ...||+|.|++.++.... .....++.++++||++.+|+|++++.+.++..+.
T Consensus 393 ~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~ 469 (902)
T PRK10517 393 T-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQL 469 (902)
T ss_pred e-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEE
Confidence 3 1 1234556777777765432 235799999998865322 2345678899999999999999988877777889
Q ss_pred EEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---cCCCCCcEEEEEeccCC
Q 010523 160 VTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFD 226 (508)
Q Consensus 160 ~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D 226 (508)
++||+||.++++|.. +++..+.+.+..++++++|+|++++||++++..+. ...|++++|+|+++|+|
T Consensus 470 ~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 470 ICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD 549 (902)
T ss_pred EEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhC
Confidence 999999999999963 22345667788899999999999999998764322 12367999999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|||++++++|++|+++||+|+|+|||++.+|.++|+++||.. ..++.|.+.+ .++..++.+.+++..+|||++|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe 624 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIE-TLSDDELANLAERTTLFARLTPM 624 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHH
Confidence 999999999999999999999999999999999999999952 3466666554 34445677788899999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|..|++++++||++|+||+||+.
T Consensus 625 ~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~ 704 (902)
T PRK10517 625 HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704 (902)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-h-ccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccc
Q 010523 387 RGIDGLSSTEFIQVL-E-LNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 387 ~~~~~~~~~i~~~~~-~-~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
|.+..++..++..+. . +..++|+.++|+||..+++-.+.++++.++..++.|+|||+
T Consensus 705 ~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r 763 (902)
T PRK10517 705 MTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCC
Confidence 999876655544432 2 23457999999996666666788999999999999999887
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=657.87 Aligned_cols=419 Identities=52% Similarity=0.806 Sum_probs=360.5
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+.+|.+++.+++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+
T Consensus 229 ~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~ 308 (755)
T TIGR01647 229 RGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL 308 (755)
T ss_pred cCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred eecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecC-CeEEEEEcC
Q 010523 85 IEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKG 163 (508)
Q Consensus 85 i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~-g~~~~~~kG 163 (508)
.. ..+.+.++++.+++.+++..+.||++.|++.++.+....+..++.++++||++.+|+|++++.+.+ |+.+.++||
T Consensus 309 ~~--~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kG 386 (755)
T TIGR01647 309 PF--FNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKG 386 (755)
T ss_pred ec--CCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeC
Confidence 32 223667888888887765556789999999987765544566888999999999999999887654 777889999
Q ss_pred cHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCC
Q 010523 164 SPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG 243 (508)
Q Consensus 164 a~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~G 243 (508)
+||.+++.|....+..+++++.+++++.+|+|++++||++ .+++|+|+|+++|+||||+|++++|++|+++|
T Consensus 387 a~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG 458 (755)
T TIGR01647 387 APQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLG 458 (755)
T ss_pred ChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCC
Confidence 9999999998776777888899999999999999999973 26789999999999999999999999999999
Q ss_pred CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEE
Q 010523 244 LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICG 323 (508)
Q Consensus 244 i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~ 323 (508)
|+|+|+|||++.+|.++|+++||..+.+....+......+.+...++++++++.++|||++|+||.++|+.||++|++|+
T Consensus 459 I~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~Va 538 (755)
T TIGR01647 459 VEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVG 538 (755)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEE
Confidence 99999999999999999999999764332222211111223344456788889999999999999999999999999999
Q ss_pred EEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 010523 324 MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLE 402 (508)
Q Consensus 324 ~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~-~~~ 402 (508)
|+|||+||+|||++|||||||++++|.|+++||+||++++|+.|+.++++||++|+||+||+.|.+..++..++.. +..
T Consensus 539 mvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~ 618 (755)
T TIGR01647 539 MTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLI 618 (755)
T ss_pred EEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998766554433 223
Q ss_pred ccccccHHHHHHHHHhhcccccccchhHHHH
Q 010523 403 LNFLFTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 403 ~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
++..+|++++++|+..+++..+.++++.++.
T Consensus 619 l~~~~~l~~~~il~~~l~~d~~~~~l~~~~~ 649 (755)
T TIGR01647 619 LILNFYFPPIMVVIIAILNDGTIMTIAYDNV 649 (755)
T ss_pred HHhCcchhHHHHHHHHHHHhHhHhhccCCCC
Confidence 3334679999999666666666766665554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-76 Score=660.83 Aligned_cols=432 Identities=25% Similarity=0.410 Sum_probs=367.9
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+++|.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.
T Consensus 278 ~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~ 357 (867)
T TIGR01524 278 LMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKH 357 (867)
T ss_pred HhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred eeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHhhhcCc--hhhhccceEEEEecCCCCCceEEEEEEecCCeEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHR 159 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~ 159 (508)
+. ..+.+.++++.+++.++.. ...||++.|++.++.+. ...+..++.++.+||++.+|+|++++.+.++..+.
T Consensus 358 ~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~ 434 (867)
T TIGR01524 358 ID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRL 434 (867)
T ss_pred ec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEE
Confidence 31 2234566677777654432 23479999999887543 12345678889999999999999988876666789
Q ss_pred EEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---cCCCCCcEEEEEeccCC
Q 010523 160 VTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFD 226 (508)
Q Consensus 160 ~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D 226 (508)
++||+||.++++|.. +++..+++.+.+++++++|+|++++||++++..+. +..|++|+|+|+++++|
T Consensus 435 ~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~D 514 (867)
T TIGR01524 435 ICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLD 514 (867)
T ss_pred EEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeC
Confidence 999999999999963 23345678888999999999999999998865432 12478899999999999
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|||++++++|++|+++||+|+|+|||+..+|.++|+++||..+ .++.|.+.++ +...++.+.+++..+|||++|+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIEE-LSDEELARELRKYHIFARLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHH
Confidence 9999999999999999999999999999999999999999632 3556655432 3344567778888999999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
||.++|+.+|++|++|+|+|||+||+|||++|||||||++|+|.|+++||+||++++|+.|+.++++||++|+||+||+.
T Consensus 590 ~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~ 669 (867)
T TIGR01524 590 QKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669 (867)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-h-ccccccHHHHHHHHHhhcccccccchhHHHHHHHHhhcccc
Q 010523 387 RGIDGLSSTEFIQVL-E-LNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 387 ~~~~~~~~~i~~~~~-~-~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
|.+..++..++..+. . +..++|+.++|+||..+++-.+.++++.+++..+.|++||+
T Consensus 670 ~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 670 MTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQ 728 (867)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCC
Confidence 999765555543332 2 23457999999996555555789999999999999987766
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-75 Score=664.22 Aligned_cols=438 Identities=26% Similarity=0.394 Sum_probs=363.4
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc-
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF- 88 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~- 88 (508)
.+.+..+++++++++|++||++++++++.|+++|+++|++||+++++|+||++++||+|||||||+|+|+|.+.++...
T Consensus 307 ~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~ 386 (1053)
T TIGR01523 307 KEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFG 386 (1053)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCc
Confidence 5677788999999999999999999999999999999999999999999999999999999999999999998775310
Q ss_pred ----c---CCC---------------------------------------C---------hHHHHHHHHHhcccC-----
Q 010523 89 ----A---GGV---------------------------------------D---------ADTVVLMAARASQVE----- 108 (508)
Q Consensus 89 ----~---~~~---------------------------------------~---------~~~~l~~aa~~~~~~----- 108 (508)
. .++ + ..+++..++.|+...
T Consensus 387 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~ 466 (1053)
T TIGR01523 387 TISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDD 466 (1053)
T ss_pred eEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccC
Confidence 0 000 0 013555566664311
Q ss_pred -------CCChHHHHHHhhhcCch----------hh-------------------hccceEEEEecCCCCCceEEEEEEe
Q 010523 109 -------NLDVIDAAIVGMLADPK----------EA-------------------RADIQEVHFLPFDPTGKRTALTYID 152 (508)
Q Consensus 109 -------~~~~~~~ai~~~~~~~~----------~~-------------------~~~~~~~~~~pf~~~~kr~s~~~~~ 152 (508)
..||.|.|++.++.... .. +..++.++.+||+|.+|||++++++
T Consensus 467 ~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~ 546 (1053)
T TIGR01523 467 ATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYED 546 (1053)
T ss_pred CCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEe
Confidence 24899999998753211 00 2346789999999999999999987
Q ss_pred cCC-eEEEEEcCcHHHHHhhhcC------------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC-----------
Q 010523 153 SEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS----------- 208 (508)
Q Consensus 153 ~~g-~~~~~~kGa~e~il~~~~~------------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~----------- 208 (508)
.++ ++++|+|||||.|+++|.. +++.++++.+.+++|+++|+|||++||+.+++.+
T Consensus 547 ~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~ 626 (1053)
T TIGR01523 547 NHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETL 626 (1053)
T ss_pred CCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhcccc
Confidence 554 4789999999999999962 2234677888999999999999999999886432
Q ss_pred -ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--------CCccccCC
Q 010523 209 -KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALSGQ 279 (508)
Q Consensus 209 -~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--------~~~~~~~~ 279 (508)
++..|++|+|+|+++++||||++++++|+.|+++||+|+|+|||+..+|.++|+++||..... ...+++|.
T Consensus 627 ~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~ 706 (1053)
T TIGR01523 627 NRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS 706 (1053)
T ss_pred chhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH
Confidence 234578999999999999999999999999999999999999999999999999999964311 23466666
Q ss_pred chhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchh
Q 010523 280 DRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIV 358 (508)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADiv 358 (508)
+.+. +.+.++.++.++..+|||++|+||.++|+.+|++|+.|+|+|||+||+|||+.|||||||| +|++.|+++||++
T Consensus 707 ~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADiv 785 (1053)
T TIGR01523 707 QFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIV 785 (1053)
T ss_pred Hhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEE
Confidence 5542 3333456677788899999999999999999999999999999999999999999999999 8999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cc------ccccHHHHHHHH-HhhcccccccchhH
Q 010523 359 LTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN------FLFTLDTVIAIL-QTAFTSKKDFGKEE 430 (508)
Q Consensus 359 l~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~~------~~~pl~~~~~l~-~~~~~~~~~~~~~~ 430 (508)
+++++|+.|+.++.+||++|+|+++++.|.+..++..++..+.. ++ ..+|++++|+|| +++.+.+|.+.++.
T Consensus 786 l~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~ 865 (1053)
T TIGR01523 786 LSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGL 865 (1053)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999998766555444332 22 247999999995 55566899999999
Q ss_pred HHHHHHHhhcccccCCCC
Q 010523 431 RELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 431 ~~~~~~~~~~~p~g~~~~ 448 (508)
+++..+.|+|+|+....+
T Consensus 866 e~~~~~~m~~~Pr~~~~~ 883 (1053)
T TIGR01523 866 EKAAPDLMDRLPHDNEVG 883 (1053)
T ss_pred CCCChhHHhcCCCCCCcc
Confidence 999999999999854433
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=657.16 Aligned_cols=435 Identities=22% Similarity=0.347 Sum_probs=365.1
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|.+++..++++++++||||||+++|++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 322 ~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 401 (941)
T TIGR01517 322 TFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGE 401 (941)
T ss_pred HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEec
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred cc---CC----CC--hHHHHHHHHHhcccC------------CCChHHHHHHhhhcC----chhhhccceEEEEecCCCC
Q 010523 88 FA---GG----VD--ADTVVLMAARASQVE------------NLDVIDAAIVGMLAD----PKEARADIQEVHFLPFDPT 142 (508)
Q Consensus 88 ~~---~~----~~--~~~~l~~aa~~~~~~------------~~~~~~~ai~~~~~~----~~~~~~~~~~~~~~pf~~~ 142 (508)
.. .+ .+ ..+++..++.++... ..||.|.|++.++.. ....+..++.++.+||++.
T Consensus 402 ~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~ 481 (941)
T TIGR01517 402 QRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSE 481 (941)
T ss_pred ceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCC
Confidence 10 00 01 122333333332211 246899999988642 2223445677889999999
Q ss_pred CceEEEEEEecCCeEEEEEcCcHHHHHhhhcCC----------hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc---
Q 010523 143 GKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK----------SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--- 209 (508)
Q Consensus 143 ~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~----------~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~--- 209 (508)
+|+|+++++..+++++.++|||||.+++.|... .+..+.+.+.+++++++|+|++++||++++.++.
T Consensus 482 ~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~ 561 (941)
T TIGR01517 482 RKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK 561 (941)
T ss_pred CCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc
Confidence 999999998777778999999999999999531 0135678888999999999999999999864432
Q ss_pred cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 010523 210 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 289 (508)
Q Consensus 210 ~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
+..|++|+|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|++|||..+. ..+++|.+.+. +...+
T Consensus 562 ~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~~-l~~~e 638 (941)
T TIGR01517 562 DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG--GLAMEGKEFRR-LVYEE 638 (941)
T ss_pred cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC--ceEeeHHHhhh-CCHHH
Confidence 2347899999999999999999999999999999999999999999999999999996432 34566665543 33345
Q ss_pred hhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHH
Q 010523 290 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 290 ~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~ 368 (508)
..+++++..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|.|+++||+++++++|+.|+
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~ 718 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 718 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHH
Confidence 66778888999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccC
Q 010523 369 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE--LNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 369 ~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
.++++||++|+|+++++.|.+..++..+.+.+.. +....|+++++++ ++++++.+|.+.++.+++..+.|+++|...
T Consensus 719 ~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~ 798 (941)
T TIGR01517 719 RAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 798 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC
Confidence 9999999999999999999998777666555432 2356799999999 666666789999999999999999999743
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-74 Score=652.58 Aligned_cols=440 Identities=23% Similarity=0.347 Sum_probs=367.1
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+.+|.+++.+++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++
T Consensus 286 ~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~ 365 (997)
T TIGR01106 286 ILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 365 (997)
T ss_pred HhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeecc--c-CC--------CCh-----HHHHHHHHHhcccC---------------CCChHHHHHHhhhc----Cchhhh
Q 010523 84 LIEIF--A-GG--------VDA-----DTVVLMAARASQVE---------------NLDVIDAAIVGMLA----DPKEAR 128 (508)
Q Consensus 84 ~i~~~--~-~~--------~~~-----~~~l~~aa~~~~~~---------------~~~~~~~ai~~~~~----~~~~~~ 128 (508)
++... . .+ .+. +.++..++.|+... ..+|.|.|++.++. +....+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~ 445 (997)
T TIGR01106 366 WFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMR 445 (997)
T ss_pred EECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHH
Confidence 75211 0 00 111 24556677765321 24789999998764 223345
Q ss_pred ccceEEEEecCCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCe
Q 010523 129 ADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLR 195 (508)
Q Consensus 129 ~~~~~~~~~pf~~~~kr~s~~~~~~---~g~~~~~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr 195 (508)
..++.++.+||+|.+|||++++... ++++++++|||||.|+++|.. +++.++.+.+.+++++++|+|
T Consensus 446 ~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlR 525 (997)
T TIGR01106 446 ERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGER 525 (997)
T ss_pred hhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 6788999999999999999887642 246789999999999999952 234567788899999999999
Q ss_pred eEEEEeeecCCCCc--------c---CCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 196 SLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 196 ~l~vA~~~~~~~~~--------~---~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
|+++||+.+++++. + ..|++|+|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|+++
T Consensus 526 vla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 526 VLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred EEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 99999998864321 1 127899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhcc--eEeecChhhHHHHHHHHhhcCC
Q 010523 265 GMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 265 gi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
|+..+... ..+++|.+.+. +.+.++++++++.. +|||++|+||.++|+.+|+.|+
T Consensus 606 gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~ 684 (997)
T TIGR01106 606 GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA 684 (997)
T ss_pred CCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC
Confidence 99643210 13455554432 22234556666654 9999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ 399 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~ 399 (508)
+|+|+|||+||+|||++|||||||| +|++.|+++||+||++|+|+.|+++|++||++|.|+++++.|.+..++..++..
T Consensus 685 vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 685 IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred EEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999999999999 699999999999999999999999999999999999999999998776665544
Q ss_pred Hhhcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhccccc
Q 010523 400 VLELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHG 444 (508)
Q Consensus 400 ~~~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 444 (508)
+...+ ...|++++|+| ++++++++|.+.++.+++.++.|.|+|+.
T Consensus 765 ~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~ 812 (997)
T TIGR01106 765 LIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRN 812 (997)
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcC
Confidence 43322 45799999999 66777788999999999999999999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-72 Score=630.70 Aligned_cols=433 Identities=26% Similarity=0.400 Sum_probs=364.4
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+.+|.+++..++++++++||||||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++
T Consensus 266 ~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i 345 (884)
T TIGR01522 266 FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKI 345 (884)
T ss_pred HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eeecc-c---C--CC-------------------ChHHHHHHHHHhcccC--------CCChHHHHHHhhhcCc--hhhh
Q 010523 84 LIEIF-A---G--GV-------------------DADTVVLMAARASQVE--------NLDVIDAAIVGMLADP--KEAR 128 (508)
Q Consensus 84 ~i~~~-~---~--~~-------------------~~~~~l~~aa~~~~~~--------~~~~~~~ai~~~~~~~--~~~~ 128 (508)
+.... . . ++ ...+++..++.|+... ..||+|.|++.++... ...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~ 425 (884)
T TIGR01522 346 WTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLR 425 (884)
T ss_pred EecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHH
Confidence 64210 0 0 00 1134555666665432 1369999999887532 2233
Q ss_pred ccceEEEEecCCCCCceEEEEEEe-cCCeEEEEEcCcHHHHHhhhcC-----------ChhHHHHHHHHHHHHHHccCee
Q 010523 129 ADIQEVHFLPFDPTGKRTALTYID-SEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAERGLRS 196 (508)
Q Consensus 129 ~~~~~~~~~pf~~~~kr~s~~~~~-~~g~~~~~~kGa~e~il~~~~~-----------~~~~~~~~~~~~~~~a~~Glr~ 196 (508)
..++.++.+||++.+|||+++++. .+++.+.++||+||.++..|.. +++.++++.+.+++++++|+|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rv 505 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRV 505 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEE
Confidence 467889999999999999998876 3567889999999999999952 1234567788889999999999
Q ss_pred EEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc
Q 010523 197 LAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276 (508)
Q Consensus 197 l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~ 276 (508)
+++||+++ +++|+|+|+++++||||++++++|+.|+++|++++|+|||+..+|.++|+++|+.... ..++
T Consensus 506 l~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v 575 (884)
T TIGR01522 506 IAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT--SQSV 575 (884)
T ss_pred EEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--Ccee
Confidence 99999974 4579999999999999999999999999999999999999999999999999996532 2345
Q ss_pred cCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhc
Q 010523 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAA 355 (508)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aA 355 (508)
+|++.+ .+...++.+.+++..+|||++|+||..+|+.+|+.|+.|+|+|||+||+||+++|||||+|| ++++.++++|
T Consensus 576 ~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aa 654 (884)
T TIGR01522 576 SGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAA 654 (884)
T ss_pred EhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhc
Confidence 555443 23334566778888999999999999999999999999999999999999999999999998 6999999999
Q ss_pred chhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcc-ccccHHHHHHH-HHhhcccccccchhHHH
Q 010523 356 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERE 432 (508)
Q Consensus 356 Divl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~-~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~ 432 (508)
|+++++++|+.|++++++||++|+|+++++.|.+..++..+.+.+ ..++ ...|++++|+| ++++...+|.++++.++
T Consensus 655 Divl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~ 734 (884)
T TIGR01522 655 DMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEP 734 (884)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCC
Confidence 999999999999999999999999999999999987665554432 3333 45799999999 55555578889999999
Q ss_pred HHHHHhhcccccCCC
Q 010523 433 LLWAHAQRTLHGLQP 447 (508)
Q Consensus 433 ~~~~~~~~~p~g~~~ 447 (508)
+.++.|+|+|+....
T Consensus 735 ~~~~~m~~~P~~~~~ 749 (884)
T TIGR01522 735 VDKDVMRKPPRPRND 749 (884)
T ss_pred CChhHhhCCCCCCCC
Confidence 999999999975433
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=629.20 Aligned_cols=435 Identities=26% Similarity=0.361 Sum_probs=359.2
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc--
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-- 88 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~-- 88 (508)
..+..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 238 ~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~ 317 (917)
T TIGR01116 238 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSS 317 (917)
T ss_pred HHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcc
Confidence 345567889999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ---------cCCCC-------------------hHHHHHHHHHhcccC------------CCChHHHHHHhhhcCch---
Q 010523 89 ---------AGGVD-------------------ADTVVLMAARASQVE------------NLDVIDAAIVGMLADPK--- 125 (508)
Q Consensus 89 ---------~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~~~~ai~~~~~~~~--- 125 (508)
..+++ .+.++..++.|+... ..+|.|.|++.++.+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~ 397 (917)
T TIGR01116 318 SSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPA 397 (917)
T ss_pred cccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCc
Confidence 00000 123455666666421 24899999998754211
Q ss_pred -----------------hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcC-----------Chh
Q 010523 126 -----------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-----------KSK 177 (508)
Q Consensus 126 -----------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~-----------~~~ 177 (508)
..+..++.++.+||+|.+|||++++++ +++++.|+|||||.|++.|.. +++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~ 476 (917)
T TIGR01116 398 TKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDK 476 (917)
T ss_pred hhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHH
Confidence 123457789999999999999999875 467889999999999999963 134
Q ss_pred HHHHHHHHHHHHHH-ccCeeEEEEeeecCCCC----------ccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 178 IGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS----------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 178 ~~~~~~~~~~~~a~-~Glr~l~vA~~~~~~~~----------~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
..+++.+.+++|++ +|+||+++||+.++++. .+..|++|+|+|+++++||||++++++|+.|+++|+++
T Consensus 477 ~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v 556 (917)
T TIGR01116 477 MKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRV 556 (917)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEE
Confidence 56678889999999 99999999999986422 13458899999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEE
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGM 324 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~ 324 (508)
+|+|||+..+|.++|+++|+..+... ...+.|.+.+. +...+..+..++..+|||++|+||.++|+.+|+.|+.|+|
T Consensus 557 ~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~ 635 (917)
T TIGR01116 557 IMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAM 635 (917)
T ss_pred EEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999999999653211 22345544322 2223345566777899999999999999999999999999
Q ss_pred EcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 010523 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-L 403 (508)
Q Consensus 325 vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~ 403 (508)
+|||+||+|||+.|||||+|++|++.++++||+++.+++|+.|++++++||++|+|+++++.|.+..++..++..+.. +
T Consensus 636 iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 715 (917)
T TIGR01116 636 TGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAA 715 (917)
T ss_pred ecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998766555444332 3
Q ss_pred c-ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCCC
Q 010523 404 N-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQP 447 (508)
Q Consensus 404 ~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 447 (508)
+ ...|+++++++ +++++++.|.+.++.+++.++.|.+||+....
T Consensus 716 ~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~ 761 (917)
T TIGR01116 716 LGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDE 761 (917)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCC
Confidence 3 34799999999 66666789999999999999999999975433
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-71 Score=633.87 Aligned_cols=435 Identities=21% Similarity=0.224 Sum_probs=352.2
Q ss_pred cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeee
Q 010523 6 HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLI 85 (508)
Q Consensus 6 ~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i 85 (508)
+.+|.+.+.+++.+++++||++||++++++++.|+.+|+|+|++||++.++|.+|++|++|||||||||+|+|+|.+.+.
T Consensus 392 ~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 392 GRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred CCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred ecccCC----------CChHHHHHHHHHhccc------CCCChHHHHHHhhhcCchhh-------------------hcc
Q 010523 86 EIFAGG----------VDADTVVLMAARASQV------ENLDVIDAAIVGMLADPKEA-------------------RAD 130 (508)
Q Consensus 86 ~~~~~~----------~~~~~~l~~aa~~~~~------~~~~~~~~ai~~~~~~~~~~-------------------~~~ 130 (508)
...... ..........+.|+.. ...||+|.|++.+.+...+. ...
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 551 (1054)
T TIGR01657 472 LSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQE 551 (1054)
T ss_pred ccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCce
Confidence 211000 1112234445555432 23589999999976421110 145
Q ss_pred ceEEEEecCCCCCceEEEEEEecC-CeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCC--
Q 010523 131 IQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-- 207 (508)
Q Consensus 131 ~~~~~~~pf~~~~kr~s~~~~~~~-g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~-- 207 (508)
+++++.+||+|.+|||+++++..+ ++.+.++|||||.|+++|... ..++.+.+.+++|+++|+||+++||+++++.
T Consensus 552 ~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~ 630 (1054)
T TIGR01657 552 LSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630 (1054)
T ss_pred EEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCccch
Confidence 778999999999999999998743 567899999999999999743 4567888999999999999999999998742
Q ss_pred ------CccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---------
Q 010523 208 ------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--------- 272 (508)
Q Consensus 208 ------~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--------- 272 (508)
+++..|++|+|+|+++|+||+|++++++|+.|+++||+|+|+|||++.||.++|+++||..+...
T Consensus 631 ~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~ 710 (1054)
T TIGR01657 631 QKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710 (1054)
T ss_pred hhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccc
Confidence 23557899999999999999999999999999999999999999999999999999999643210
Q ss_pred ------------------------------------------CccccCCchhhh--hhcCChhHHhhhcceEeecChhhH
Q 010523 273 ------------------------------------------SSALSGQDRDES--IVALPVDELIEKADGFAGVFPEHK 308 (508)
Q Consensus 273 ------------------------------------------~~~~~~~~~~~~--~~~~~~~~~~~~~~v~a~~~P~~K 308 (508)
..+++|+..+.. ....++.+++.+..||||++|+||
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK 790 (1054)
T TIGR01657 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQK 790 (1054)
T ss_pred cCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHH
Confidence 011222221111 111235567788899999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 309 YEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRG 388 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~ 388 (508)
.++|+.||+.|+.|+|+|||+||+||||+|||||||+++ | |..+||+++.+++|+.|+++|++||+++.++++.+.|.
T Consensus 791 ~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~ 868 (1054)
T TIGR01657 791 ETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYM 868 (1054)
T ss_pred HHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999865 3 45899999999999999999999999999998888776
Q ss_pred HHHHHHHHHHHHhhccccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccc
Q 010523 389 IDGLSSTEFIQVLELNFLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLH 443 (508)
Q Consensus 389 ~~~~~~~i~~~~~~~~~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 443 (508)
+......++..+.......|++.+|++ .+.+...++.+.++.+++..+++.++|.
T Consensus 869 ~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~ 924 (1054)
T TIGR01657 869 ALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP 924 (1054)
T ss_pred HHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC
Confidence 654433333322222345799999988 4555557778889999999999998884
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-65 Score=590.05 Aligned_cols=437 Identities=19% Similarity=0.247 Sum_probs=346.4
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHH------HHHHhC----CCeecCchHHHHhccccEEEcccccccccCce
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGS------KRLSLQ----GVITKRMSAIVDMAGMDVLCCDKTGTLTLNKL 78 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~------~~l~~~----gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m 78 (508)
+...+..++.++...+|++||+.++++...++ .+|.++ ++++|+.++.|+||+|++||+|||||||+|+|
T Consensus 296 ~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M 375 (1057)
T TIGR01652 296 GFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIM 375 (1057)
T ss_pred HHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeE
Confidence 33478889999999999999999999999999 888875 49999999999999999999999999999999
Q ss_pred EEEeeeeecccCC-------------C--------------------C----------------hHHHHHHHHHhccc--
Q 010523 79 TVDKNLIEIFAGG-------------V--------------------D----------------ADTVVLMAARASQV-- 107 (508)
Q Consensus 79 ~v~~~~i~~~~~~-------------~--------------------~----------------~~~~l~~aa~~~~~-- 107 (508)
+++++++....++ . + ..+++..++.|+..
T Consensus 376 ~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~ 455 (1057)
T TIGR01652 376 EFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455 (1057)
T ss_pred EEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccc
Confidence 9999876321000 0 0 12345556666542
Q ss_pred -----C-------CCChHHHHHHhhhcCch------------------hhhccceEEEEecCCCCCceEEEEEEecCCeE
Q 010523 108 -----E-------NLDVIDAAIVGMLADPK------------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKM 157 (508)
Q Consensus 108 -----~-------~~~~~~~ai~~~~~~~~------------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~ 157 (508)
. ..+|.|.|++.++...+ .....++.++.+||++.+|||++++++.+|++
T Consensus 456 ~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~ 535 (1057)
T TIGR01652 456 EFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRI 535 (1057)
T ss_pred cccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeE
Confidence 1 24799999998754221 01245788999999999999999999888888
Q ss_pred EEEEcCcHHHHHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cC
Q 010523 158 HRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ES 211 (508)
Q Consensus 158 ~~~~kGa~e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~ 211 (508)
++++||||+.|+++|.. +++..+++.+++++|+.+|+||+++||+.+++++. +.
T Consensus 536 ~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 615 (1057)
T TIGR01652 536 KLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAES 615 (1057)
T ss_pred EEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999974 34567788999999999999999999999875421 34
Q ss_pred CCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC------------------
Q 010523 212 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS------------------ 273 (508)
Q Consensus 212 ~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~------------------ 273 (508)
.|++|+|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||+..+....
T Consensus 616 iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i 695 (1057)
T TIGR01652 616 IEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAI 695 (1057)
T ss_pred HHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999997543221
Q ss_pred ---------------------ccccCCchhhhhhcC---ChhHHhhhcc--eEeecChhhHHHHHHHHhhc-CCEEEEEc
Q 010523 274 ---------------------SALSGQDRDESIVAL---PVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIG 326 (508)
Q Consensus 274 ---------------------~~~~~~~~~~~~~~~---~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~-g~~v~~vG 326 (508)
.+++|+..+...... .+.++...+. +|||++|+||.++|+.+|+. |++|+|+|
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iG 775 (1057)
T TIGR01652 696 KFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIG 775 (1057)
T ss_pred HHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 123333332222111 1233444444 99999999999999999998 99999999
Q ss_pred CCCCChhhhhcCCeeEEecC-chHHHHhhcchhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 010523 327 NGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-L 403 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~-~~~~a~~aADivl~~~~l~~i~~~i-~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~-~ 403 (508)
||+||+|||++|||||++.+ ...+|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.+.-++..++.++.. +
T Consensus 776 DG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 776 DGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 334688999999976 99999998 7899999999999999887554443333222 1
Q ss_pred ----cccccHHHHHHH-HHhhcccccccchh--HHHHHHHHhhcccccCCC
Q 010523 404 ----NFLFTLDTVIAI-LQTAFTSKKDFGKE--ERELLWAHAQRTLHGLQP 447 (508)
Q Consensus 404 ----~~~~pl~~~~~l-~~~~~~~~~~~~~~--~~~~~~~~~~~~p~g~~~ 447 (508)
....|++.++++ +++++++.|.+.++ +++..++.+.++|+.++.
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~ 904 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYRE 904 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHH
Confidence 122345555555 88999999988664 477778899999985543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-64 Score=541.96 Aligned_cols=334 Identities=22% Similarity=0.347 Sum_probs=287.7
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
++...+..++++++++|||+||..++++++.|+++|+|+|+++|+++++|++|++|+||||||||||+|++.+.+.. .
T Consensus 244 ~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~-~- 321 (673)
T PRK14010 244 NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI-P- 321 (673)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE-e-
Confidence 55667888889999999999999999999999999999999999999999999999999999999999887776532 1
Q ss_pred ccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 88 FAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 88 ~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
..+.+.++++..++.++..++ ||++.|++.++...... ......+++||++.+|+|++.+ +|+ .+.||+++.
T Consensus 322 -~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~ 393 (673)
T PRK14010 322 -VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNS 393 (673)
T ss_pred -CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHH
Confidence 234556677777777776544 69999999876532111 0111245689999999999864 343 566999999
Q ss_pred HHhhhcCC-hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|... ......+.+..++++++|+|+++++.+ ++++|+++++||+|+|++++|++|+++||++
T Consensus 394 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~v 460 (673)
T PRK14010 394 MVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIET 460 (673)
T ss_pred HHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeE
Confidence 99999642 123344667778899999999998753 4899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.+|.++|+++|+. ++|+|++|+||.++|+.+|++|+.|+|+|
T Consensus 461 vMiTGDn~~TA~aIA~elGI~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtG 510 (673)
T PRK14010 461 VMCTGDNELTAATIAKEAGVD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTG 510 (673)
T ss_pred EEECCCCHHHHHHHHHHcCCc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEEC
Confidence 999999999999999999995 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSS 394 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~ 394 (508)
||+||+|||++|||||||++|+|.||++||+|+++++|+.|++++++||++|.|+++++.|.+.++..
T Consensus 511 DGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 511 DGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred CChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-63 Score=537.09 Aligned_cols=328 Identities=26% Similarity=0.366 Sum_probs=285.2
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
.++..++++++++|||+|+.+++++...|+++|+|+|+++|+++++|+||++|+||||||||||+|+|++.+.+. ..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~ 323 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VP 323 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CC
Confidence 388999999999999999999999999999999999999999999999999999999999999999999987542 23
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCc-h--hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~-~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+.++++..++.++..++| |.+++++.++... + ..+..++..+++||++.++++++.+ +| ..+.||+++.
T Consensus 324 ~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~ 397 (679)
T PRK01122 324 GVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDA 397 (679)
T ss_pred CCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHH
Confidence 56777888888888877665 9999999886531 1 1111244677899999888777643 34 5789999999
Q ss_pred HHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|.. ....++++.+..++++++|.|++++|++. +++|+++++||+|+|++++|++|+++||++
T Consensus 398 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~v 464 (679)
T PRK01122 398 IRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKT 464 (679)
T ss_pred HHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeE
Confidence 9999953 22345677888899999999999999753 899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.+|.++|+++|++ +++|+++|+||.++|+.+|++|+.|+|+|
T Consensus 465 vMiTGDn~~TA~aIA~elGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtG 514 (679)
T PRK01122 465 VMITGDNPLTAAAIAAEAGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTG 514 (679)
T ss_pred EEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 999999999999999999994 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID 390 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~ 390 (508)
||+||+|||++|||||||++|+|.|+++||+|++++||+.|++++++||++.-.--....|++.
T Consensus 515 DGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 515 DGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred CCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999999999999999999999999999999976322233444443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-65 Score=534.29 Aligned_cols=439 Identities=23% Similarity=0.347 Sum_probs=365.6
Q ss_pred cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeee
Q 010523 6 HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLI 85 (508)
Q Consensus 6 ~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i 85 (508)
+++|-+++.+++.++++.+|++||..+++.++...++|++++.++|++++.|+||..++||+|||||||+|+|+|...|.
T Consensus 310 gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~ 389 (1019)
T KOG0203|consen 310 GYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWF 389 (1019)
T ss_pred cchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeecc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred ecccC----------------CCChHHHHHHHHHhccc---------------CCCChHHHHHHhhh----cCchhhhcc
Q 010523 86 EIFAG----------------GVDADTVVLMAARASQV---------------ENLDVIDAAIVGML----ADPKEARAD 130 (508)
Q Consensus 86 ~~~~~----------------~~~~~~~l~~aa~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~ 130 (508)
+.... +..-..+.+++..|++. .+.++.+.|+.++. .+..+.|..
T Consensus 390 d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~ 469 (1019)
T KOG0203|consen 390 DNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRER 469 (1019)
T ss_pred CCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHh
Confidence 32110 11123566777777643 24467888988875 344566788
Q ss_pred ceEEEEecCCCCCceEEEEEEecC---CeEEEEEcCcHHHHHhhhc----------CChhHHHHHHHHHHHHHHccCeeE
Q 010523 131 IQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH----------NKSKIGRKVNAVINKFAERGLRSL 197 (508)
Q Consensus 131 ~~~~~~~pf~~~~kr~s~~~~~~~---g~~~~~~kGa~e~il~~~~----------~~~~~~~~~~~~~~~~a~~Glr~l 197 (508)
.+.+..+||||++|..-.+....+ .+..+..||+||.++++|+ .++...+.+++...++...|-||+
T Consensus 470 ~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVl 549 (1019)
T KOG0203|consen 470 NPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVL 549 (1019)
T ss_pred hHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHH
Confidence 888999999999999877666533 5677888999999999996 345677888999999999999999
Q ss_pred EEEeeecCCCCc-----------cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCC
Q 010523 198 AVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 198 ~vA~~~~~~~~~-----------~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi 266 (508)
+++++.+++..+ ..+..+|.|+|++++.||||..+++++..|+.+||+|+|+|||++.||+++|+..||
T Consensus 550 gF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 550 GFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI 629 (1019)
T ss_pred HHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence 999999886532 234578999999999999999999999999999999999999999999999999997
Q ss_pred CCCCC---C---------C----------ccccCCchhhhhhcCChhHHhhhcc--eEeecChhhHHHHHHHHhhcCCEE
Q 010523 267 GTNMY---P---------S----------SALSGQDRDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKHLQARNHIC 322 (508)
Q Consensus 267 ~~~~~---~---------~----------~~~~~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~g~~v 322 (508)
..... . . .++.|.+.. .+...++++++.... ||||.||+||..||+.+|+.|..|
T Consensus 630 i~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiV 708 (1019)
T KOG0203|consen 630 ISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIV 708 (1019)
T ss_pred ecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEE
Confidence 43211 0 0 112222221 233344566665543 899999999999999999999999
Q ss_pred EEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 323 GMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 323 ~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
+++|||+||+||||+|||||||| .|+|++|+|||+||+||||++|+..+++||.+|+|+||.+.|.++.++--+.-++.
T Consensus 709 aVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~ 788 (1019)
T KOG0203|consen 709 AVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLL 788 (1019)
T ss_pred EEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHH
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999876655443333
Q ss_pred hcc--ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccC
Q 010523 402 ELN--FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 402 ~~~--~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
.++ .-+|+..+.+| .......+|.+.+.+|.+..++|+|+|+..
T Consensus 789 fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p 835 (1019)
T KOG0203|consen 789 FILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNP 835 (1019)
T ss_pred HHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCC
Confidence 333 45688888888 666666899999999999999999999853
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-62 Score=526.47 Aligned_cols=366 Identities=28% Similarity=0.355 Sum_probs=311.8
Q ss_pred ccccc-ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 2 FAIQH-REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 2 ~~~~~-~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
|++.. .+|..++.+++++|+++|||||.+++|+++..|+.+++|+||++|+.+++|+++++|+++||||||||+|+|+|
T Consensus 344 w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v 423 (713)
T COG2217 344 WPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV 423 (713)
T ss_pred HHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEE
Confidence 55555 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
.++.. .. + ++++++.+++..+..++| |+++||++++.+.. ....+.++.+|-- +-.+ . .+| ..+
T Consensus 424 ~~v~~--~~-~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~~-~---v~g--~~v 487 (713)
T COG2217 424 TDVVA--LD-G-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVEDFEEIPGR---GVEA-E---VDG--ERV 487 (713)
T ss_pred EEEec--CC-C-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccceeeeccC---cEEE-E---ECC--EEE
Confidence 88542 22 3 788999999999998776 99999999765432 1122223344421 1111 1 245 567
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
..|++..+.+.-. +... .....+.+.++|..++.++.++ +++|++.+.|++|++++++|++|+
T Consensus 488 ~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~~a~~aI~~L~ 550 (713)
T COG2217 488 LVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALK 550 (713)
T ss_pred EEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCChhHHHHHHHHH
Confidence 7899998854321 1111 5567788899999999999987 899999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
+.|++++|+||||..+|.++|+++||+ ++++++.|++|.++|+.||++|+
T Consensus 551 ~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~~V~~l~~~g~ 600 (713)
T COG2217 551 ALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAEIVRELQAEGR 600 (713)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHHHHHHHHhcCC
Confidence 999999999999999999999999994 47999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV 400 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~ 400 (508)
+|+|||||+||+|||..||||||||.|+|.|+++||++|+++++..++.+++.||+++++||+|+.|++.++..++.+.+
T Consensus 601 ~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~ 680 (713)
T COG2217 601 KVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAA 680 (713)
T ss_pred EEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred hhccccccHHHHHHHHHhhcccccccchhHHHHHH
Q 010523 401 LELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 435 (508)
Q Consensus 401 ~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 435 (508)
+.++ ++..-...|.+++..+..++.|...+
T Consensus 681 ~g~l-----~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 681 GGLL-----TPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred Hhhc-----CHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 6622 23333377788888888877776653
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-62 Score=555.12 Aligned_cols=440 Identities=18% Similarity=0.198 Sum_probs=338.6
Q ss_pred HHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCC----------CeecCchHHHHhccccEEEcccccccccCceEEEe
Q 010523 13 LNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQG----------VITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDK 82 (508)
Q Consensus 13 i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~g----------ilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~ 82 (508)
+..+++++...||++|++.+.+.....+..+.++. +.+|+.+..|+||+|++||+|||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33345666689999999999999977677787765 78999999999999999999999999999999999
Q ss_pred eeeecccCC-----------------------------------------CC------hHHHHHHHHHhcccC-------
Q 010523 83 NLIEIFAGG-----------------------------------------VD------ADTVVLMAARASQVE------- 108 (508)
Q Consensus 83 ~~i~~~~~~-----------------------------------------~~------~~~~l~~aa~~~~~~------- 108 (508)
|++....++ .+ ..+++...+.|+...
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 987321000 00 023556667776431
Q ss_pred -----------CCChHHHHHHhhhcCch----------------hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEE
Q 010523 109 -----------NLDVIDAAIVGMLADPK----------------EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVT 161 (508)
Q Consensus 109 -----------~~~~~~~ai~~~~~~~~----------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~ 161 (508)
..+|.+.|++.++.+.+ ..+..|+.++.+||+|.+|||++++++.+|+.++++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 12688999998765322 235678899999999999999999998888899999
Q ss_pred cCcHHHHHhhhcCC--hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cCCCC
Q 010523 162 KGSPEQILNLLHNK--SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGS 214 (508)
Q Consensus 162 kGa~e~il~~~~~~--~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~~e~ 214 (508)
||||+.|+++|... .+..+++.+++++|+++|+|||++|||.++++++ +..|+
T Consensus 634 KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 713 (1178)
T PLN03190 634 KGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVEN 713 (1178)
T ss_pred ecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhc
Confidence 99999999999742 4567788999999999999999999999975432 24589
Q ss_pred CcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc------------------
Q 010523 215 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL------------------ 276 (508)
Q Consensus 215 ~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~------------------ 276 (508)
+|+++|+++++||||++++++|+.|+++||+|||+|||+.++|+++|+.||+.++......+
T Consensus 714 dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~ 793 (1178)
T PLN03190 714 NLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVM 793 (1178)
T ss_pred CcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999996553322111
Q ss_pred -----------------------------cCCchhhhhh---cCChhHHhhhcc--eEeecChhhHHHHHHHHhhc-CCE
Q 010523 277 -----------------------------SGQDRDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKHLQAR-NHI 321 (508)
Q Consensus 277 -----------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~-g~~ 321 (508)
+|...+.... ...+.++..++. +|||++|.||+++|+.+|+. +++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~v 873 (1178)
T PLN03190 794 SKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDM 873 (1178)
T ss_pred hhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcE
Confidence 1111111111 012334444444 79999999999999999997 589
Q ss_pred EEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH----H
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGIDGLSS----T 395 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~~~~~~----~ 395 (508)
|+|+|||+||++||++|||||++. ....+|..+||+.+.+ |..+.+++. |||+.|+|+.+.+.|.+.-++. .
T Consensus 874 tlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 874 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred EEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999975 3455788899999966 888988887 9999999999999987742222 2
Q ss_pred HHHHHhhccccccHH--HHHHHHHhhccccccc--chhHHHHHHHHhhcccccCCCCCC-cccc
Q 010523 396 EFIQVLELNFLFTLD--TVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS 454 (508)
Q Consensus 396 i~~~~~~~~~~~pl~--~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~~~~~-~~~~ 454 (508)
+|.++...++..++- .+..+++++||+.|++ |..++.-.+....+.|+.++.-+. ..|+
T Consensus 952 f~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n 1015 (1178)
T PLN03190 952 FWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN 1015 (1178)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC
Confidence 222222222222222 2223399999999886 578888888888999997765433 3444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-59 Score=505.82 Aligned_cols=330 Identities=26% Similarity=0.336 Sum_probs=287.5
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeeccc
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA 89 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~ 89 (508)
..++..++++++++|||+++...+.....|+++|+|+|+++|+++++|+||++|+||||||||||+|+|++.+++. .
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~ 323 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---A 323 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---c
Confidence 3468888999999999999888888878899999999999999999999999999999999999999999987642 2
Q ss_pred CCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhh--ccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 90 GGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 90 ~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
.+.+.++++..++.++..++| |++++++.++.+..... ..++..++.||++.++++++.+. +| ..+.||++|.
T Consensus 324 ~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~ 398 (675)
T TIGR01497 324 QGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDA 398 (675)
T ss_pred CCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHH
Confidence 356778888888888877654 99999998765321111 12345678999998777765443 44 5789999999
Q ss_pred HHhhhcCC-hhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~-~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+++.|... ...+..+.+.+++++++|.|++++|++. +++|+++++||+||+++++|++|+++|+++
T Consensus 399 i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v 465 (675)
T TIGR01497 399 IKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKT 465 (675)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEE
Confidence 99888532 2344567788899999999999999864 899999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+|||+..+|..+|+++|+. +++++++|++|..+|+.+|++|+.|+|+|
T Consensus 466 ~miTGD~~~ta~~iA~~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvG 515 (675)
T TIGR01497 466 IMITGDNRLTAAAIAAEAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTG 515 (675)
T ss_pred EEEcCCCHHHHHHHHHHcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 999999999999999999994 37999999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGID 390 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~ 390 (508)
||.||+|||+.|||||||+++++.++++||+++++++|+.|++++++||+++-+......|++.
T Consensus 516 DG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 516 DGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIA 579 (675)
T ss_pred CCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeec
Confidence 9999999999999999999999999999999999999999999999999999887777777764
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-58 Score=487.71 Aligned_cols=372 Identities=24% Similarity=0.282 Sum_probs=312.8
Q ss_pred ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeee
Q 010523 7 REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIE 86 (508)
Q Consensus 7 ~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~ 86 (508)
.+++.++..++++|+++|||||+++.|++...|....+++|+|+|..+++|.+.++++++||||||||+|+++|.+..+
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~- 605 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS- 605 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe-
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999988543
Q ss_pred cccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhh--ccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCc
Q 010523 87 IFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEAR--ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGS 164 (508)
Q Consensus 87 ~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa 164 (508)
+.+..+..+++.+++..+..+.| |+.+|++.|+.+..... ........+|-.. ....+. .+|+ .++.|+
T Consensus 606 -~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~~~~~~~pg~g--~~~~~~---~~~~--~i~iGN 676 (951)
T KOG0207|consen 606 -LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEG--IYVTVT---VDGN--EVLIGN 676 (951)
T ss_pred -cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCccccceeecccCCC--cccceE---Eeee--EEeech
Confidence 33336778888887777777565 99999999987554211 1222233333322 221111 2332 277899
Q ss_pred HHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC
Q 010523 165 PEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL 244 (508)
Q Consensus 165 ~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi 244 (508)
.+++...- ....+.++..+++-...|..+.++++.+ +++|++.++|++|+|+..+|+.|+++|+
T Consensus 677 ~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv~~l~D~vr~~a~~av~~Lk~~Gi 740 (951)
T KOG0207|consen 677 KEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGVFALEDQVRPDAALAVAELKSMGI 740 (951)
T ss_pred HHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEEEEeccccchhHHHHHHHHHhcCc
Confidence 99886532 2344557788888899999999999988 9999999999999999999999999999
Q ss_pred cEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEE
Q 010523 245 GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGM 324 (508)
Q Consensus 245 ~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~ 324 (508)
+++|+||||..+|.++|+++|+. +++|++.|+||.++|+.+|+.++.|+|
T Consensus 741 ~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaM 790 (951)
T KOG0207|consen 741 KVVMLTGDNDAAARSVAQQVGID------------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAM 790 (951)
T ss_pred eEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEeccCchhhHHHHHHHHhcCCcEEE
Confidence 99999999999999999999974 489999999999999999999999999
Q ss_pred EcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010523 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 404 (508)
Q Consensus 325 vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 404 (508)
+|||+||+|||..|||||+|+.+++.|.++|||||+.+++..++.+|..||+++.|+|.|+.|++.++...+.+.++.|+
T Consensus 791 VGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~ 870 (951)
T KOG0207|consen 791 VGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFA 870 (951)
T ss_pred EeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888887765
Q ss_pred cc-ccHHHHHHHHHhhcccccccchhHHHHH
Q 010523 405 FL-FTLDTVIAILQTAFTSKKDFGKEERELL 434 (508)
Q Consensus 405 ~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~ 434 (508)
.+ +-|.+..--..|++++.+++-...-.+.
T Consensus 871 P~~~~L~Pw~A~lama~SSvsVv~sSllLk~ 901 (951)
T KOG0207|consen 871 PFGIVLPPWMASLAMAASSVSVVLSSLLLKR 901 (951)
T ss_pred CCccccCchHHHHHHHhhhHHHhhhHHHHhh
Confidence 33 2233333337888898888754444443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-55 Score=483.26 Aligned_cols=358 Identities=26% Similarity=0.320 Sum_probs=295.1
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+++.+|..++.+++++|+++|||||+++.|+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|.+.
T Consensus 378 ~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~ 457 (741)
T PRK11033 378 LFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDI 457 (741)
T ss_pred HccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEE
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred eeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEE-EE-ecCCeEEEEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALT-YI-DSEGKMHRVT 161 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~-~~-~~~g~~~~~~ 161 (508)
+. ..+.+.++++.+++..+..++ ||+++|++.++.+.. + .+||.+..+.+.-. ++ ..+|+ .+.
T Consensus 458 ~~---~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~~-----~----~~~~~~~~~~~~g~Gv~~~~~g~--~~~ 522 (741)
T PRK11033 458 HP---ATGISESELLALAAAVEQGST-HPLAQAIVREAQVRG-----L----AIPEAESQRALAGSGIEGQVNGE--RVL 522 (741)
T ss_pred Ee---cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhcC-----C----CCCCCcceEEEeeEEEEEEECCE--EEE
Confidence 42 234677888888877776644 599999998764321 1 14565555544321 21 13554 345
Q ss_pred cCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHh
Q 010523 162 KGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 241 (508)
Q Consensus 162 kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~ 241 (508)
.|+++.+.+ ..+.+...++++..+|.|+++|+++. +++|+++++|++|+|++++|++|++
T Consensus 523 ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 523 ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecCCchhHHHHHHHHHH
Confidence 689988754 12344556778899999999999865 8999999999999999999999999
Q ss_pred CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCE
Q 010523 242 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHI 321 (508)
Q Consensus 242 ~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~ 321 (508)
.|++++|+|||+..+|..+|+++||. .++++.|++|..+|+.+|+. +.
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~~~v~~l~~~-~~ 630 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPEDKVKAVTELNQH-AP 630 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHHHHHHHHHHhcC-CC
Confidence 99999999999999999999999993 46789999999999999965 58
Q ss_pred EEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
|+|+|||+||+|||+.|||||+|+++++.++++||+++.++++..++.++++||++++||++|+.|++..+...+.+.+.
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887776666543
Q ss_pred hccccccHHHHHHHHHhhcccccccchhHHHH
Q 010523 402 ELNFLFTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 402 ~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
. ++|+ +.-.+.+..++..+..++.|..
T Consensus 711 g---~~~~--~~a~~~~~~ss~~v~~Nslrl~ 737 (741)
T PRK11033 711 G---ITGL--WLAVLADSGATALVTANALRLL 737 (741)
T ss_pred h---hhHH--HHHHHHHcChHHHHHHHHHhhc
Confidence 2 2221 1112455556666666665544
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-56 Score=472.42 Aligned_cols=390 Identities=24% Similarity=0.332 Sum_probs=307.6
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+.+....+.++|.++.+.+|+|||.+++++..++.+||.|+||+|-+++.+-..|+++++|||||||||++.+.+....
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 46778888999999999999999999999999999999999999999999999999999999999999999999886533
Q ss_pred eecccC---C----------------------CCh-HHHHHHHHHhccc------CCCChHHHHHHhhhc----------
Q 010523 85 IEIFAG---G----------------------VDA-DTVVLMAARASQV------ENLDVIDAAIVGMLA---------- 122 (508)
Q Consensus 85 i~~~~~---~----------------------~~~-~~~l~~aa~~~~~------~~~~~~~~ai~~~~~---------- 122 (508)
. .... + ..+ -.+....+.|+.. -..||+|..+.+..+
T Consensus 491 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 491 P-VERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred e-ccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccc
Confidence 2 1100 0 001 0122223333321 123566654443211
Q ss_pred --------------Cchh-----h---h-ccceEEEEecCCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhhcCChhH
Q 010523 123 --------------DPKE-----A---R-ADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKI 178 (508)
Q Consensus 123 --------------~~~~-----~---~-~~~~~~~~~pf~~~~kr~s~~~~~~-~g~~~~~~kGa~e~il~~~~~~~~~ 178 (508)
+|.. . . ..+..++.+||+|.-+||||++.++ +.+++.|+|||||.|.+.|.. +.+
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tv 648 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETV 648 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccC
Confidence 0100 0 0 1467889999999999999999874 568899999999999999964 467
Q ss_pred HHHHHHHHHHHHHccCeeEEEEeeecCCC--------CccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEc
Q 010523 179 GRKVNAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 250 (508)
Q Consensus 179 ~~~~~~~~~~~a~~Glr~l~vA~~~~~~~--------~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlT 250 (508)
+..+.+.++.|+.+|+|++++|+|.++.. .++..|++++|+|++.|++++|++++.+|++|.++.|+++|+|
T Consensus 649 P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcT 728 (1140)
T KOG0208|consen 649 PADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCT 728 (1140)
T ss_pred CccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEc
Confidence 88899999999999999999999999866 3678899999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCCCC---------------Cccc--------------------------------------c
Q 010523 251 GDQLAIAKETGRRLGMGTNMYP---------------SSAL--------------------------------------S 277 (508)
Q Consensus 251 GD~~~~a~~ia~~lgi~~~~~~---------------~~~~--------------------------------------~ 277 (508)
|||..||..+|++|||...... ...+ +
T Consensus 729 GDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~s 808 (1140)
T KOG0208|consen 729 GDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMS 808 (1140)
T ss_pred CCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEec
Confidence 9999999999999999542100 0000 0
Q ss_pred CCchhhhh--hcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhc
Q 010523 278 GQDRDESI--VALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 355 (508)
Q Consensus 278 ~~~~~~~~--~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aA 355 (508)
|+..+-.. ....++.+..+..+||||+|+||.++|+.||+.|+.|+|+|||+||+.|||+|||||+++++. |.-||
T Consensus 809 G~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE--ASvAA 886 (1140)
T KOG0208|consen 809 GKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE--ASVAA 886 (1140)
T ss_pred CchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh--HhhcC
Confidence 00000000 001134567788899999999999999999999999999999999999999999999998653 67789
Q ss_pred chhccCCChhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q 010523 356 DIVLTEPGLNVIITAVLISRA----IFQRMRNYMVRGIDGLSSTEFI 398 (508)
Q Consensus 356 Divl~~~~l~~i~~~i~~~R~----~~~~i~~~~~~~~~~~~~~i~~ 398 (508)
.+.-.-++.+.+++.|++||+ .|..+|-...|+++.+...+++
T Consensus 887 pFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L 933 (1140)
T KOG0208|consen 887 PFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL 933 (1140)
T ss_pred ccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee
Confidence 999888899999999999998 4666666677877665555443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-54 Score=459.70 Aligned_cols=308 Identities=34% Similarity=0.533 Sum_probs=275.0
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|..++.+++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||||+|+|+|.++++.
T Consensus 176 ~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~- 254 (499)
T TIGR01494 176 SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVL- 254 (499)
T ss_pred cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEec-
Confidence 4889999999999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred ccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 88 FAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 88 ~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
. . +. ...||++.+++.++... .++..||++..+++++++...++ .++||+++.
T Consensus 255 -~-~-------------~~-~s~hp~~~ai~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~ 307 (499)
T TIGR01494 255 -G-G-------------EY-LSGHPDERALVKSAKWK--------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEF 307 (499)
T ss_pred -C-C-------------Cc-CCCChHHHHHHHHhhhc--------CcceeccCCCCceEEEEEecCCc---EEEeCCHHH
Confidence 1 0 12 24469999999877531 23567999999999988875333 478999999
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEE
Q 010523 168 ILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 247 (508)
Q Consensus 168 il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~ 247 (508)
+.+.|.. +.+..+++..+|+|++++|++. +++|++.++|++|++++++|+.|+++|++++
T Consensus 308 i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~ 367 (499)
T TIGR01494 308 VLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAKETISELREAGIRVI 367 (499)
T ss_pred HHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEE
Confidence 9988742 2334556888999999999986 8999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcC
Q 010523 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGN 327 (508)
Q Consensus 248 mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGD 327 (508)
|+|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+||
T Consensus 368 ~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 368 MLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred EEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 9999999999999999987 6889999999999999999999999999
Q ss_pred CCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010523 328 GVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 401 (508)
Q Consensus 328 G~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~ 401 (508)
|.||+||++.|||||+|+ ++++||++++++++..+..++.+||++++++++++.|++..+...+.+.+.
T Consensus 415 g~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 415 GVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred ChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 688999999999999999999999999999999999999887776666654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-56 Score=496.33 Aligned_cols=443 Identities=19% Similarity=0.192 Sum_probs=339.2
Q ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHH----------hCCCeecCchHHHHhccccEEEcccccccccCceE
Q 010523 10 RTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLS----------LQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLT 79 (508)
Q Consensus 10 ~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~----------~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~ 79 (508)
...+..++.++...+|++|.+.+.+.-...+.... ...+.+|..+.-|+||+|++|++|||||||+|.|+
T Consensus 325 ~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~ 404 (1151)
T KOG0206|consen 325 FVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSME 404 (1151)
T ss_pred HHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceee
Confidence 44567778888889999998777766555543322 23578999999999999999999999999999999
Q ss_pred EEeeeeecccCCCC--------------------------------------------hHHHHHHHHHhcccC-------
Q 010523 80 VDKNLIEIFAGGVD--------------------------------------------ADTVVLMAARASQVE------- 108 (508)
Q Consensus 80 v~~~~i~~~~~~~~--------------------------------------------~~~~l~~aa~~~~~~------- 108 (508)
+.+|.|....++.. ..+.....+.|+...
T Consensus 405 F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~ 484 (1151)
T KOG0206|consen 405 FKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDS 484 (1151)
T ss_pred eecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCc
Confidence 99998754322111 113444555554321
Q ss_pred ------CCChHHHHHHhhhcCchh----------------hhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHH
Q 010523 109 ------NLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPE 166 (508)
Q Consensus 109 ------~~~~~~~ai~~~~~~~~~----------------~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e 166 (508)
..+|.+.|++..+.+..- ....|+.++.++|+|.||||||++++++|+..++||||+.
T Consensus 485 ~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADs 564 (1151)
T KOG0206|consen 485 GKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADS 564 (1151)
T ss_pred cceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcch
Confidence 135667777765432211 1357899999999999999999999999999999999999
Q ss_pred HHHhhhc-CChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc-------------------------cCCCCCcEEEE
Q 010523 167 QILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK-------------------------ESSGSPWQFIG 220 (508)
Q Consensus 167 ~il~~~~-~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~-------------------------~~~e~~l~~lG 220 (508)
+|.+++. +.....++..+++++|+.+|+|+||+||++++++++ +.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 9999998 556788889999999999999999999999987653 34589999999
Q ss_pred EeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--------------------
Q 010523 221 LIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD-------------------- 280 (508)
Q Consensus 221 ~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~-------------------- 280 (508)
.+++||+++++++++|+.|++||||+||+|||+.+||+++|..|++..+.+....+...+
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999976644333332211
Q ss_pred -------------------------hhhhhhcCC---h--hHHhhhcceEeecChhhHHHHHHHHhhc-CCEEEEEcCCC
Q 010523 281 -------------------------RDESIVALP---V--DELIEKADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGV 329 (508)
Q Consensus 281 -------------------------~~~~~~~~~---~--~~~~~~~~v~a~~~P~~K~~iV~~l~~~-g~~v~~vGDG~ 329 (508)
....+.... + ...-+++.+|||++|.||+.+|+..++. +..+++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 111111100 1 1234567799999999999999999754 88999999999
Q ss_pred CChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhc
Q 010523 330 NDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGIDGLSSTEF----IQVLEL 403 (508)
Q Consensus 330 ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~~~~~~~i~----~~~~~~ 403 (508)
||++|++.|||||+++ ....+|..+||+.+.+ |.-+-+++. |||+.|.|+.++++|.+.-+....+ .++...
T Consensus 805 NDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~g 882 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNG 882 (1151)
T ss_pred ccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 9999999999999997 5677788999999987 666666554 8999999999999998864333222 222222
Q ss_pred cccccHHHHHHH--HHhhccccccc--chhHHHHHHHHhhcccccCCCCCC-cccc
Q 010523 404 NFLFTLDTVIAI--LQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS 454 (508)
Q Consensus 404 ~~~~pl~~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~~~~~-~~~~ 454 (508)
+..-|+---..+ ++++|+++|++ |..++..+.....+.|..++.-+. .+|+
T Consensus 883 fSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~ 938 (1151)
T KOG0206|consen 883 FSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFN 938 (1151)
T ss_pred CCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccc
Confidence 222222222222 89999998886 678888888999999998877654 4454
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=462.93 Aligned_cols=363 Identities=27% Similarity=0.314 Sum_probs=304.0
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
|..++..++++|+++|||||++++|+++..++.+++|+|+++|+++++|+++++|++|||||||||+|+|+|.+...
T Consensus 464 ~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~--- 540 (834)
T PRK10671 464 IVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKT--- 540 (834)
T ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEc---
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
..+.+.++++.+++..++.++| |+++|+++++.+.. .......+.+| ++ .+... .+| ..+.+|+++.+
T Consensus 541 ~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~~~~~~~~-----g~-Gv~~~-~~g--~~~~~G~~~~~ 608 (834)
T PRK10671 541 FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQVNGFRTLR-----GL-GVSGE-AEG--HALLLGNQALL 608 (834)
T ss_pred cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCcccceEec-----ce-EEEEE-ECC--EEEEEeCHHHH
Confidence 2345677888888888777665 99999998764211 01111122222 11 11111 245 35667999987
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 248 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~m 248 (508)
.+... ..+.+...++++.++|.++++++++. .++|++.+.|++||+++++|++|++.|++++|
T Consensus 609 ~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~ 671 (834)
T PRK10671 609 NEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAALQRLHKAGYRLVM 671 (834)
T ss_pred HHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchhhHHHHHHHHHHCCCeEEE
Confidence 54221 12345666778889999999999876 89999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCC
Q 010523 249 ITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 328 (508)
Q Consensus 249 lTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG 328 (508)
+|||+..++..+++++|+. .+++++.|++|.++++.++.+++.|+|+|||
T Consensus 672 ~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg 721 (834)
T PRK10671 672 LTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDG 721 (834)
T ss_pred EcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCC
Confidence 9999999999999999995 3689999999999999999999999999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL-- 406 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~-- 406 (508)
.||++|++.||+||+||++++.++++||++++++++..|..++++||+++.+|++|+.|++.++..++.+.++.+...
T Consensus 722 ~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g 801 (834)
T PRK10671 722 INDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTG 801 (834)
T ss_pred HHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999988887554321
Q ss_pred ccHHHHHHHHHhhcccccccchhHHHH
Q 010523 407 FTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 407 ~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
+.++|+.-...|.+++..++.++.|..
T Consensus 802 ~~l~p~~a~~~m~~ss~~vv~nslrl~ 828 (834)
T PRK10671 802 TLLNPVVAGAAMALSSITVVSNANRLL 828 (834)
T ss_pred cccCHHHHHHHhcccceeehhhhHHhc
Confidence 235666556889999999998887654
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-53 Score=434.38 Aligned_cols=430 Identities=21% Similarity=0.243 Sum_probs=328.8
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhC----CCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQ----GVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~----gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
++.+|-..+.+++.+....||++|-+-+.++...-.+....+ |.++|+.+.-|+||.|.++.+|||||||+|.|.+
T Consensus 346 ~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~ 425 (1051)
T KOG0210|consen 346 FGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEF 425 (1051)
T ss_pred CCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchhee
Confidence 578899999999999999999999999999998888888765 6789999999999999999999999999999999
Q ss_pred EeeeeecccCCCCh----------------------------------HHHHHHHHHhcccCC------------CChHH
Q 010523 81 DKNLIEIFAGGVDA----------------------------------DTVVLMAARASQVEN------------LDVID 114 (508)
Q Consensus 81 ~~~~i~~~~~~~~~----------------------------------~~~l~~aa~~~~~~~------------~~~~~ 114 (508)
+|+++...+.+.+. .+.....+.|++..+ .+|.+
T Consensus 426 KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDE 505 (1051)
T KOG0210|consen 426 KKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDE 505 (1051)
T ss_pred eeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCe
Confidence 99876433221110 122333444443311 02233
Q ss_pred HHHHhhhc-----------------CchhhhccceEEEEecCCCCCceEEEEEEec-CCeEEEEEcCcHHHHHhhhcCCh
Q 010523 115 AAIVGMLA-----------------DPKEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKS 176 (508)
Q Consensus 115 ~ai~~~~~-----------------~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~-~g~~~~~~kGa~e~il~~~~~~~ 176 (508)
-|++++-. .+......|++++.|||++..|||++++++. .|+...|.|||+.+|-....
T Consensus 506 VAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq--- 582 (1051)
T KOG0210|consen 506 VAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ--- 582 (1051)
T ss_pred EEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---
Confidence 33333211 1111124789999999999999999999985 68889999999999977663
Q ss_pred hHHHHHHHHHHHHHHccCeeEEEEeeecCCCCcc--------------------------CCCCCcEEEEEeccCCCCCc
Q 010523 177 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE--------------------------SSGSPWQFIGLIPLFDPPIH 230 (508)
Q Consensus 177 ~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~--------------------------~~e~~l~~lG~i~l~D~~r~ 230 (508)
..+++++.-..+|++|+|+|.+|.+.+++++++ ..|.+++++|+.+.||++++
T Consensus 583 -~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~ 661 (1051)
T KOG0210|consen 583 -YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQD 661 (1051)
T ss_pred -cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhh
Confidence 445677788899999999999999999876532 34789999999999999999
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--------------------------CccccCCchhhh
Q 010523 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--------------------------SSALSGQDRDES 284 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--------------------------~~~~~~~~~~~~ 284 (508)
+++.+++.||++||+|||+|||+.+||..+|+..++.+.... ..++.|+...-.
T Consensus 662 dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~c 741 (1051)
T KOG0210|consen 662 DVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFC 741 (1051)
T ss_pred hhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHH
Confidence 999999999999999999999999999999999998653221 223344433322
Q ss_pred hh--cCChhHHhh--hcceEeecChhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchh
Q 010523 285 IV--ALPVDELIE--KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIV 358 (508)
Q Consensus 285 ~~--~~~~~~~~~--~~~v~a~~~P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADiv 358 (508)
+. +.++-++.+ .+.++||++|+||+++++.+|++ |..|+++|||.||+.|+++||+||++. ....+|.-|||+.
T Consensus 742 l~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfS 821 (1051)
T KOG0210|consen 742 LKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFS 821 (1051)
T ss_pred HHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhcccc
Confidence 21 222334443 35689999999999999999986 889999999999999999999999985 6778899999999
Q ss_pred ccCCChhHHHHHHH-HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhhccccccHHHHHHH----HHhhcccccccch
Q 010523 359 LTEPGLNVIITAVL-ISRAIFQRMRNYMVRGI-----DGLSSTEFIQVLELNFLFTLDTVIAI----LQTAFTSKKDFGK 428 (508)
Q Consensus 359 l~~~~l~~i~~~i~-~~R~~~~~i~~~~~~~~-----~~~~~~i~~~~~~~~~~~pl~~~~~l----~~~~~~~~~~~~~ 428 (508)
+++ |+.+.+++. +||..|+|-.+...|.+ +....++|.. ++.|.|....|-. +.+.-++.|+|.+
T Consensus 822 Itq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~---v~yF~~V~LyqG~LmvgysT~YTmlPVFSl 896 (1051)
T KOG0210|consen 822 ITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSS---VFYFAPVALYQGFLMVGYSTCYTMLPVFSL 896 (1051)
T ss_pred HHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHH---HhhhcchHHhhhhHHHHHHHHHHHhhhhee
Confidence 988 999998776 79999999886655544 3455555443 3446677777664 6667778888875
Q ss_pred -hHHHHHHHHhhcccc
Q 010523 429 -EERELLWAHAQRTLH 443 (508)
Q Consensus 429 -~~~~~~~~~~~~~p~ 443 (508)
-++.-........|.
T Consensus 897 v~d~Dv~~~~a~~yPE 912 (1051)
T KOG0210|consen 897 VLDRDVSESLAVLYPE 912 (1051)
T ss_pred eecccccHHHHhhhHH
Confidence 334444444444554
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-50 Score=433.39 Aligned_cols=328 Identities=29% Similarity=0.380 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
|..++.+++++|+++|||||++++|+++..++.+++|+||++|+++++|+|+++|+||||||||||+|+|+|.+... .
T Consensus 224 ~~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~--~ 301 (562)
T TIGR01511 224 WLFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHV--F 301 (562)
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec--C
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999988532 2
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
.+.+.++++.+++.+++.++| |+++|++.++..........+..+.+|. +..... .+| ..+..|+++.+
T Consensus 302 -~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~~---~~g--~~~~iG~~~~~ 370 (562)
T TIGR01511 302 -GDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEGT---VEG--TKIQLGNEKLL 370 (562)
T ss_pred -CCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEEE---ECC--EEEEEECHHHH
Confidence 345677888888888777665 9999999887532211111222233321 112221 244 45678999987
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 248 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~m 248 (508)
.+... . +.++.++|.+++.++.+. +++|++.++|++||+++++|++|++.|++++|
T Consensus 371 ~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~i 426 (562)
T TIGR01511 371 GENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLRPEAKEVIQALKRRGIEPVM 426 (562)
T ss_pred HhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccccHHHHHHHHHHHHcCCeEEE
Confidence 43211 1 112457899999998765 89999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCC
Q 010523 249 ITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG 328 (508)
Q Consensus 249 lTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG 328 (508)
+|||+..++..+++++|+. +|+++.|++|.++++.++.+++.|+|+|||
T Consensus 427 lSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg 475 (562)
T TIGR01511 427 LTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDG 475 (562)
T ss_pred EcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCC
Confidence 9999999999999999982 578889999999999999999999999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 404 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 404 (508)
.||++|++.||+||+|+.+++.++++||+++.++++..+..++++||+++++|++|+.|++..+..++.+.++.+.
T Consensus 476 ~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 476 INDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred CccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998999999999999999999999999999999999999999999988888877765543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=431.23 Aligned_cols=333 Identities=28% Similarity=0.368 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
.++.+++++++++|||+||+++|++++.++++|+++|+++|+++++|+++++|++|||||||||+|+|+|.+... . .
T Consensus 195 ~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~ 271 (556)
T TIGR01525 195 GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-D 271 (556)
T ss_pred hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-C
Confidence 789999999999999999999999999999999999999999999999999999999999999999999988543 1 2
Q ss_pred CCC--hHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccce-EEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~--~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~-~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+ .++++.+++.++...+ ||++.|++.++......... . ....+| .+..... .+|. ..+..|+++.
T Consensus 272 ~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~ 341 (556)
T TIGR01525 272 DASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRL 341 (556)
T ss_pred CCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHH
Confidence 223 6778887777776654 59999999987532211110 1 112222 1112211 2331 3566799887
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCC-CcE
Q 010523 168 ILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG-LGV 246 (508)
Q Consensus 168 il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~G-i~v 246 (508)
+ + ... .+ .......++++.++|+|+++++++. +++|.+.++|++||+++++|+.|++.| +++
T Consensus 342 ~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 342 L-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred H-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-------------EEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 6 2 111 11 1223455677889999999999865 899999999999999999999999999 999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+|||+..++..+++++|+. .+|+++.|++|.++++.++..++.|+|+|
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~------------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vG 454 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGID------------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVG 454 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCC------------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 999999999999999999994 36889999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL 403 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~ 403 (508)
||.||++|++.||+||+++++++.+++.||+++.+++++.+.+++++||++++++++|+.|++..+..++.+.+..+
T Consensus 455 Dg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999899999999999999999999999999999999999999999998888887776554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-49 Score=423.08 Aligned_cols=339 Identities=27% Similarity=0.375 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc
Q 010523 9 YRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF 88 (508)
Q Consensus 9 ~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~ 88 (508)
+..++.+++++++++|||+||+++|+++..++++++|+|+++|+++++|+++++|++|||||||||+|+|+|.+.+.
T Consensus 193 ~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--- 269 (536)
T TIGR01512 193 WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP--- 269 (536)
T ss_pred cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQI 168 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~i 168 (508)
.+++.+++.++...+ ||++.|+++++.+.. .+.....+|. +..... .+|+ .+..|+++.+
T Consensus 270 ------~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~----~~~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~ 329 (536)
T TIGR01512 270 ------AEVLRLAAAAEQASS-HPLARAIVDYARKRE----NVESVEEVPG----EGVRAV---VDGG--EVRIGNPRSL 329 (536)
T ss_pred ------HHHHHHHHHHhccCC-CcHHHHHHHHHHhcC----CCcceEEecC----CeEEEE---ECCe--EEEEcCHHHH
Confidence 367777776666544 599999998875321 2223333332 111111 2453 3456888766
Q ss_pred HhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cEE
Q 010523 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVK 247 (508)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v~ 247 (508)
.+... ..+..+|.+++.++.+. .++|.+.++|++||+++++|++|+++|+ +++
T Consensus 330 ~~~~~-------------~~~~~~~~~~~~v~~~~-------------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~ 383 (536)
T TIGR01512 330 EAAVG-------------ARPESAGKTIVHVARDG-------------TYLGYILLSDEPRPDAAEAIAELKALGIEKVV 383 (536)
T ss_pred hhcCC-------------cchhhCCCeEEEEEECC-------------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEE
Confidence 43210 14567788988887654 8999999999999999999999999999 999
Q ss_pred EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcC
Q 010523 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGN 327 (508)
Q Consensus 248 mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGD 327 (508)
|+|||+..++..+++++|+. .+|+++.|++|..+++.++.+++.|+|+||
T Consensus 384 vvTgd~~~~a~~i~~~lgi~------------------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 384 MLTGDRRAVAERVARELGID------------------------------EVHAELLPEDKLEIVKELREKYGPVAMVGD 433 (536)
T ss_pred EEcCCCHHHHHHHHHHcCCh------------------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 99999999999999999994 258889999999999999999999999999
Q ss_pred CCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 010523 328 GVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL 406 (508)
Q Consensus 328 G~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~ 406 (508)
|.||++|++.||+||+++ ++++.++.+||+++.++++..+.+++.+||++++++++|+.|++..+..++.+.+..+ +
T Consensus 434 g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~--~ 511 (536)
T TIGR01512 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV--L 511 (536)
T ss_pred CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--c
Confidence 999999999999999999 7899999999999999999999999999999999999999999988888877766442 1
Q ss_pred ccHHHHHHHHHhhcccccccchhHH
Q 010523 407 FTLDTVIAILQTAFTSKKDFGKEER 431 (508)
Q Consensus 407 ~pl~~~~~l~~~~~~~~~~~~~~~~ 431 (508)
-| +.-...|.+++..+..++.|
T Consensus 512 ~p---~~aa~~m~~ss~~v~~ns~r 533 (536)
T TIGR01512 512 PL---WLAVLGHEGSTVLVILNALR 533 (536)
T ss_pred cH---HHHHHHHcChHHHHHHHHHh
Confidence 12 22224455555555544443
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-45 Score=379.13 Aligned_cols=324 Identities=25% Similarity=0.324 Sum_probs=259.8
Q ss_pred HHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC---------
Q 010523 20 LIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------- 90 (508)
Q Consensus 20 li~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~--------- 90 (508)
|...+|.-||+-++++...+...|+|.|++|..|-.|.-.|++|+.|||||||||+..|.|..+- ....
T Consensus 437 lTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~~~~~~s 514 (1160)
T KOG0209|consen 437 LTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEGALTPAS 514 (1160)
T ss_pred EeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecc--cccCCcccccchh
Confidence 34458999999999999999999999999999999999999999999999999999999998632 1110
Q ss_pred CCChHHHHHHHHHhc------ccCCCChHHHHHHhhhcCchhh------h----ccceEEEEecCCCCCceEEEEEEec-
Q 010523 91 GVDADTVVLMAARAS------QVENLDVIDAAIVGMLADPKEA------R----ADIQEVHFLPFDPTGKRTALTYIDS- 153 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~------~~~~~~~~~~ai~~~~~~~~~~------~----~~~~~~~~~pf~~~~kr~s~~~~~~- 153 (508)
....+.+. ..+.|+ ..--.||+++|.+..++...+. + ..+++.+.+.|.|.-|||+++....
T Consensus 515 ~~p~~t~~-vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~ 593 (1160)
T KOG0209|consen 515 KAPNETVL-VLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQG 593 (1160)
T ss_pred hCCchHHH-HHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhccc
Confidence 01122233 333332 2234589999999877532221 1 2477889999999999999887642
Q ss_pred ---CCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCC--------CCccCCCCCcEEEEEe
Q 010523 154 ---EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLI 222 (508)
Q Consensus 154 ---~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~--------~~~~~~e~~l~~lG~i 222 (508)
+-+++...|||||.|.+++. +++..+++...+|+++|.|||+++|+.++. ..+++.|++|.|.|++
T Consensus 594 ~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFl 670 (1160)
T KOG0209|consen 594 PGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFL 670 (1160)
T ss_pred CCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeE
Confidence 23678889999999998875 677788889999999999999999999873 2467899999999999
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCc----------------------------
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS---------------------------- 274 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~---------------------------- 274 (508)
.|.-|+|+|++++|+.|++.+++|+|+||||+.||..+|+++|+..+.....
T Consensus 671 if~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 671 IFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred EEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 9999999999999999999999999999999999999999999966422111
Q ss_pred -----------cccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 275 -----------ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 275 -----------~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
+++|+..+.......+..++.++.+|||+.|.||..++..|++.|+.++|+|||.||+.|||.||||||
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVA 830 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVA 830 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhccccee
Confidence 112222222222223456677888999999999999999999999999999999999999999999999
Q ss_pred ecCchH
Q 010523 344 VADATD 349 (508)
Q Consensus 344 ~~~~~~ 349 (508)
+-+++.
T Consensus 831 LL~~~~ 836 (1160)
T KOG0209|consen 831 LLNNPE 836 (1160)
T ss_pred hhcCCh
Confidence 875433
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-43 Score=349.09 Aligned_cols=315 Identities=26% Similarity=0.373 Sum_probs=272.4
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccC
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG 90 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 90 (508)
-.+..++++|++.||-.++-.++.--..|+.|+.+.|++-+++.++|..|.+|++..|||||+|.|+-.-.+.+ -.+
T Consensus 248 ~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~ 324 (681)
T COG2216 248 ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVP 324 (681)
T ss_pred cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCC
Confidence 35778899999999999999999888889999999999999999999999999999999999999987765543 245
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchh-h-hccce-EEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 91 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE-A-RADIQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~-~-~~~~~-~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
+.+.+++...+..++-. .+.|..+.|+..+.+... . ....+ ...+.||+.+.++..+-.. ++ ..+.||+.+.
T Consensus 325 gv~~~~la~aa~lsSl~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~da 399 (681)
T COG2216 325 GVSEEELADAAQLASLA-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDA 399 (681)
T ss_pred CCCHHHHHHHHHHhhhc-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CC--ceeecccHHH
Confidence 78888888877776654 334777778776543211 1 11222 3578999987766655332 23 6778999999
Q ss_pred HHhhhcCCh-hHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcE
Q 010523 168 ILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGV 246 (508)
Q Consensus 168 il~~~~~~~-~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v 246 (508)
+........ ..++.+....++.++.|-++|.|+.++ +++|++.++|-+||+.+|-+.+||+.||+.
T Consensus 400 i~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkT 466 (681)
T COG2216 400 IRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKT 466 (681)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeE
Confidence 998876433 478889999999999999999999876 999999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEc
Q 010523 247 KMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 247 ~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vG 326 (508)
+|+||||+.||..+|++.|+++ ..|+++||+|.++|+.-|.+|+.|+|+|
T Consensus 467 vM~TGDN~~TAa~IA~EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtG 516 (681)
T COG2216 467 VMITGDNPLTAAAIAAEAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTG 516 (681)
T ss_pred EEEeCCCHHHHHHHHHHhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcC
Confidence 9999999999999999999963 5799999999999999999999999999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA 376 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~ 376 (508)
||.||+|||.+||||+||.+|+++||++++.|=+|.|...+.+.++.|++
T Consensus 517 DGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKq 566 (681)
T COG2216 517 DGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQ 566 (681)
T ss_pred CCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhh
Confidence 99999999999999999999999999999999999999999999999987
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=229.45 Aligned_cols=211 Identities=31% Similarity=0.404 Sum_probs=155.9
Q ss_pred ccEEEcccccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCC
Q 010523 62 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 141 (508)
Q Consensus 62 i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~ 141 (508)
|++||||||||||+|++.+ . . .+...++.++...+..++| |++.++..+....... ........++
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~~~~~~--- 66 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLESFSEFI--- 66 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEEEEEET---
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhhheeee---
Confidence 6899999999999999998 1 0 4566777777666666554 9999999876542211 1122222222
Q ss_pred CCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEE
Q 010523 142 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 221 (508)
Q Consensus 142 ~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~ 221 (508)
.+...... ++. +. |+++.+....... .............|.+.+.++. ++.++|.
T Consensus 67 --~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 67 --GRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp --TTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred --eccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 11111111 111 22 8888886654321 1112222334566777777775 3489999
Q ss_pred eccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 222 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 222 i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
+.+.|++|++++++|+.|+++|++++|+|||+..++..+++.+||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ec--ChhhH--HHHHHHHhhcCCEEEEEcCCCCChhhhhcCC
Q 010523 302 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 302 ~~--~P~~K--~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad 339 (508)
++ +|++| ..+++.|+.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-16 Score=129.65 Aligned_cols=123 Identities=28% Similarity=0.409 Sum_probs=109.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
.+.+.++---++=++++++|++|++. ++|++.|||..-+....|+.+|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 57888888899999999999999999 99999999999999999999999643
Q ss_pred cceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe-c--CchHHHHhhcchhccCCChhHHHHH
Q 010523 297 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A--DATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~-~--~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
.+|+...|+.|..+++.|+.++++|.|+|||+||.+||++||+||.. + +..+.+..+||+|+.+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999885 4 4677788999999865 5544443
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=116.59 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=99.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 305 (508)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+.+.... . .+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 58899999999999999999999999988888899999984311000000000000 0 000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+.|.+.++.+.++ ...|+++|||.||.+|++.|++|||+ ++.+..++.||.++..+++++++.++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888877654 35799999999999999999999999 888999999999999999999987664
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.7e-10 Score=105.39 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=95.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.+.|+.+++.| ++.++||.....+..+++.+|+.........+.+.. .+ .......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~------------tG~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RV------------VGYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---ee------------ECeeecCcc
Confidence 57999999999999975 999999999999999999999963211111111100 00 000114578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
+|..+++.+++.+..+.++|||.||.+|++.||+||++..... .+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHH-HHHhCCCCCcccCHHHHHHHHHHH
Confidence 8999999998888889999999999999999999999975444 444555443345677777777655
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.5e-10 Score=107.60 Aligned_cols=145 Identities=26% Similarity=0.330 Sum_probs=101.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCcc-cc---CC-----chh---h---hh-----
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSA-LS---GQ-----DRD---E---SI----- 285 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~-~~---~~-----~~~---~---~~----- 285 (508)
+.+.+.++|+++++.|++++++||+....+..+.+.+|+..... ++.. .. +. ..+ + ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999853211 1111 10 00 000 0 00
Q ss_pred ------h---------------cCC---hhHHhhhc----c-----eEeecChhh--HHHHHHHHhhc----CCEEEEEc
Q 010523 286 ------V---------------ALP---VDELIEKA----D-----GFAGVFPEH--KYEIVKHLQAR----NHICGMIG 326 (508)
Q Consensus 286 ------~---------------~~~---~~~~~~~~----~-----v~a~~~P~~--K~~iV~~l~~~----g~~v~~vG 326 (508)
. ..+ ..+.+++. . .+..+.|.. |..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0 000 00111111 0 112334433 77766666543 34699999
Q ss_pred CCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 327 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 327 DG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
|+.||.+|++.|++|+||+++.+.+|+.||+|..+++-+++.++|+
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999999999999998876
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.6e-10 Score=110.93 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|..-++.|.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 355555554433 245999999999999999999999999999999999999999999999998886
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-09 Score=106.22 Aligned_cols=153 Identities=19% Similarity=0.193 Sum_probs=105.7
Q ss_pred EeccCCC-CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CC-------ccccCCchh--------
Q 010523 221 LIPLFDP-PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PS-------SALSGQDRD-------- 282 (508)
Q Consensus 221 ~i~l~D~-~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~-------~~~~~~~~~-------- 282 (508)
.+.-.+. +.+.+.++|+++++.|+++.++||.....+..+.+++++..-.+ ++ ..+.....+
T Consensus 13 TLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~ 92 (264)
T COG0561 13 TLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELL 92 (264)
T ss_pred CccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHH
Confidence 3333444 88999999999999999999999999999999999999964110 00 000000000
Q ss_pred ------------------------h---------------------hhh----------cCChhHH---hhh-----cce
Q 010523 283 ------------------------E---------------------SIV----------ALPVDEL---IEK-----ADG 299 (508)
Q Consensus 283 ------------------------~---------------------~~~----------~~~~~~~---~~~-----~~v 299 (508)
. ... .....+. +.+ ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 172 (264)
T COG0561 93 ELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLT 172 (264)
T ss_pred HHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceE
Confidence 0 000 0000010 000 001
Q ss_pred E-------eecChh--hHHHHHHHHhhc-CC---EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH
Q 010523 300 F-------AGVFPE--HKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 300 ~-------a~~~P~--~K~~iV~~l~~~-g~---~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~ 366 (508)
+ ..+.|. +|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-++
T Consensus 173 ~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~G 252 (264)
T COG0561 173 VSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDG 252 (264)
T ss_pred EEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchH
Confidence 1 233343 687777777663 43 4999999999999999999999999999999999999989999999
Q ss_pred HHHHHHH
Q 010523 367 IITAVLI 373 (508)
Q Consensus 367 i~~~i~~ 373 (508)
|.++|+.
T Consensus 253 v~~~l~~ 259 (264)
T COG0561 253 VAEALEK 259 (264)
T ss_pred HHHHHHH
Confidence 9988874
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=104.77 Aligned_cols=144 Identities=21% Similarity=0.249 Sum_probs=99.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCC--------chhhhhh----------
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQ--------DRDESIV---------- 286 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~--------~~~~~~~---------- 286 (508)
.+-+.+.++|++|++.|+++.++||.....+..+.+.+++....+ +...+... .....+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 377899999999999999999999999999999999999853211 11111000 0000000
Q ss_pred -----cC------------C---hhHHhhhcc-------eEeecCh--hhHHHHHHHHhhc----CCEEEEEcCCCCChh
Q 010523 287 -----AL------------P---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAP 333 (508)
Q Consensus 287 -----~~------------~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ND~~ 333 (508)
.. . ..+.+++.. .+..++| ..|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 0 000111111 1123333 4788777777553 235999999999999
Q ss_pred hhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 334 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 334 al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
|++.|++|+||+++.+.+++.||+|...++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888888765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.8e-09 Score=98.71 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec--ChhhHHHH
Q 010523 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEI 311 (508)
Q Consensus 234 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~i 311 (508)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|... .|+-...+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 46899999999999999999999999999999952 22222 23333444
Q ss_pred HHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHH
Q 010523 312 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 312 V~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i 367 (508)
++.++-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 44444344679999999999999999999999999999999999999876665544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-09 Score=101.92 Aligned_cols=129 Identities=21% Similarity=0.267 Sum_probs=93.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee-cCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 305 (508)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+.. .+.......+.. +. ..+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~---~~----------~~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGK---LT----------GLVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCE---EE----------EEecCcccCC
Confidence 579999999999999999999999999999999999999853 111111100000 00 000001 123
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
..|..+++.+.++ ...|+++||+.||.++++.|+++++++ +.+..+++||+++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3466777665544 246999999999999999999999985 567788899999999999887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.6e-09 Score=105.78 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=56.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch--hccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi--vl~~~~l~~i~~~i~ 372 (508)
.|..-++.|.+. ...|+++|||.||.+||+.|+.||||+|+.+.+|++||. |+.+++-+++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666543 246999999999999999999999999999999999997 777888999998875
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.5e-09 Score=103.62 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc--hhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD--ivl~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+. ...|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 365555555443 24599999999999999999999999999999999988 6778888999998886
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.3e-09 Score=96.82 Aligned_cols=117 Identities=25% Similarity=0.314 Sum_probs=88.0
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
++++.+.+.|. .+|++|++.|+++.++||+....+..+.+.+|+...
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------- 70 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------- 70 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------
Confidence 34555544443 289999999999999999999999999999998521
Q ss_pred cceEeecChhhHHHHHHHHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH-HHHHH
Q 010523 297 ADGFAGVFPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 371 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~-i~~~i 371 (508)
|... ..|.+.++.+.+ ....|+|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 71 ---~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 71 ---YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred ---Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 1111 234444444332 3467999999999999999999999999988889999999998776444 44433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.3e-09 Score=100.92 Aligned_cols=146 Identities=23% Similarity=0.258 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-cccCCc--------hhh-h----------
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALSGQD--------RDE-S---------- 284 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-~~~~~~--------~~~-~---------- 284 (508)
.+.+.+.++|+++++.|++++++||++...+..+.+.+|+....+ +.. +...+. ... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 367888999999999999999999999999999999999643211 010 000000 000 0
Q ss_pred ----hh-cC-------------C---hhHHhhhc---------ceEeecCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 010523 285 ----IV-AL-------------P---VDELIEKA---------DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 328 (508)
Q Consensus 285 ----~~-~~-------------~---~~~~~~~~---------~v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG 328 (508)
.. .. . ...+.++. ..+..+.| .+|..-++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 00 0 00111111 01223333 3677777776553 3569999999
Q ss_pred CCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH----HHHHHH
Q 010523 329 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 372 (508)
Q Consensus 329 ~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~----i~~~i~ 372 (508)
.||.+|++.|++|+||+|+.+.+|+.||.|...++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 655554
|
catalyze the same reaction as SPP. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=98.38 Aligned_cols=122 Identities=20% Similarity=0.173 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 304 (508)
.+++|++.+.++.+++.|.+|+++||-...-+..+++.+|+....-+.....+.... . .+. --+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt----G----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT----G----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe----c----------eeeeeecC
Confidence 568999999999999999999999999999999999999996533221111110000 0 122 2345
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCC
Q 010523 305 PEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 362 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g~---~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~ 362 (508)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++.... ..+..|+......
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~-~l~~~a~~~~~~~ 202 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP-KLRALADVRIWPI 202 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH-HHHHHHHHhcChh
Confidence 57888888666553 44 5999999999999999999999997433 3555666665443
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=98.48 Aligned_cols=66 Identities=23% Similarity=0.201 Sum_probs=56.7
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
..|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-++|.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 4688877777653 35799999999999999999999999999999999999999988778888765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-08 Score=99.42 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555544332 2 45999999999999999999999999999999999999999999999998886
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=108.96 Aligned_cols=52 Identities=23% Similarity=0.401 Sum_probs=49.8
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|+++|||.||.+||+.|++||||+||.+.+|+.||+|..+++-++|.++|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5999999999999999999999999999999999999999999999998886
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-08 Score=82.50 Aligned_cols=64 Identities=30% Similarity=0.383 Sum_probs=52.2
Q ss_pred CCChHHHHHHhhhcCc------hhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhc
Q 010523 109 NLDVIDAAIVGMLADP------KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 173 (508)
Q Consensus 109 ~~~~~~~ai~~~~~~~------~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~ 173 (508)
..+|.+.|++.++... ...+..++.++.+||+|.+|||+++++ .++...+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 4568888888876533 345678999999999999999999998 334566799999999999996
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.7e-08 Score=90.88 Aligned_cols=102 Identities=26% Similarity=0.334 Sum_probs=80.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHH
Q 010523 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 313 (508)
Q Consensus 234 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 313 (508)
..|+.|++.|+++.++||.....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 58999999999999999999999999999999842 1221 233544444
Q ss_pred HHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHH
Q 010523 314 HLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 314 ~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i 367 (508)
.+.+ ....|+||||+.||.+|++.|+++++++++.+..+..||+++..++-.+.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCH
Confidence 4422 23579999999999999999999999988888888999999975543333
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.8e-08 Score=96.51 Aligned_cols=65 Identities=23% Similarity=0.292 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
.|..-++.+.+. ...++++||+.||.+|++.|++|++|+++.+.+++.||+++.+++-++|.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 477777776554 24699999999999999999999999999999999999999988888887653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-07 Score=88.62 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+...........++.. +. ......|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i~------------~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---IT------------GYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---EE------------Cccccccc
Confidence 3579999999999999 99999999999999999999998531111111100000 00 00012467
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch-hccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi-vl~~~~l~~i~~~i~ 372 (508)
.|...++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888889999888899999999999999999999999887544444445555 44 44676665544
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.7e-07 Score=91.97 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.4
Q ss_pred hHHHHHHHHhh----c--CCEEEEEcCCCCChhhhhcCCeeEEecCch---HHHHhh---cchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA----R--NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA---ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~----~--g~~v~~vGDG~ND~~al~~AdvGIa~~~~~---~~a~~a---ADivl~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+ . ...++++||+.||.+||+.|++||||+|+. +..|+. +++|...++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 45555555543 3 567999999999999999999999999987 468876 458888999999998886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.5e-08 Score=83.84 Aligned_cols=113 Identities=24% Similarity=0.393 Sum_probs=89.3
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
-|+.++++||+|.++||.+...+..-++.+||.. +|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHHH
Confidence 3899999999999999999999999999999941 2222 3566666655
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH----HHHHHHHHHHHHH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIFQ 379 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~----i~~~i~~~R~~~~ 379 (508)
|.++ -..|+++||..||.|+|+..++++|+.++.+..++.||+|+...+-.+ +.++|..++..+.
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 5443 456999999999999999999999999999999999999998766444 4455555544433
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.9e-07 Score=87.75 Aligned_cols=117 Identities=25% Similarity=0.331 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.++++.|++.|+++.++|+-....+..+.+.+|+.. .+.......+... . +-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~--~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGF--I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCe--E----------ecceeeEEccc
Confidence 478999999999999999999999999999999999999742 1111111110000 0 00112224466
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 356 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD 356 (508)
.|..+++.+.++ ...++++||+.||.+|++.|++++++.......+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 777777666443 34699999999999999999999999865555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.8e-07 Score=91.27 Aligned_cols=66 Identities=21% Similarity=0.174 Sum_probs=52.3
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCChhhhhcCCeeEEecCch-HH-----HHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-DA-----ARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~-------~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~-~~-----a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|..-++.+.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|++....+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46655555533 3457999999999999999999999999544 21 3457999999999999998887
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.9e-07 Score=86.23 Aligned_cols=139 Identities=13% Similarity=0.017 Sum_probs=87.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC-CccccCCchhhhhhcCChhHHhhhcceEe-ec
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGFA-GV 303 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~ 303 (508)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....++. ...+.++.... ..+..+.. .+. .+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~---~~p~~~~~----~~~~~c 141 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI---DWPHPCDG----TCQNQC 141 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---eCCCCCcc----ccccCC
Confidence 36899999999999999999999999999888888888754333222 12222221110 00000000 000 11
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
...|..+++.++.....|+|+|||.||.+|++.||+.++-+.-.+-.+..---...-.+|..+...+.
T Consensus 142 -g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 142 -GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred -CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 34689999998888888999999999999999999987754211111111111122255777766554
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.6e-07 Score=89.20 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=54.4
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCCCChhhhhcCCeeEEecCchHHHH----hhc-chhc--cCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~----~g-~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~----~aA-Divl--~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-+++.++|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666655543 35 889999999999999999999999999999988 666 6777 5777889988876
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.4e-07 Score=82.81 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=83.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCC-CCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+-|++++.++.|++.|.+|.++||.-...+..++.++||+.. .+....+.+..-. +..... --.-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk--~~gfd~--------~~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK--YLGFDT--------NEPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc--cccccc--------CCccccCC
Confidence 468999999999999999999999999999999999999752 3322222221110 000000 00112234
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCChhhhhcCCeeEEecC--chHHHHhhcchhc
Q 010523 307 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVL 359 (508)
Q Consensus 307 ~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~AdvGIa~~~--~~~~a~~aADivl 359 (508)
.|.+++..+++. ...++|||||.||.+|+..||.=|+.+. --+..+..|+..+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 688999988874 3468999999999999999887777652 2333444454443
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.8e-07 Score=84.90 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=68.8
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh---
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE--- 306 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~--- 306 (508)
+++.+.|+.++++|++++|+||+....+..+++.+|++........+.... ......+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211111111000 01123444444
Q ss_pred hHHHHHHHH------hhcCCEEEEEcCCCCChhhhh
Q 010523 307 HKYEIVKHL------QARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 307 ~K~~iV~~l------~~~g~~v~~vGDG~ND~~al~ 336 (508)
.|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 399999999 445789999999999999986
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.5e-06 Score=81.69 Aligned_cols=130 Identities=22% Similarity=0.307 Sum_probs=83.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+..+.+. ....... .. ......
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~------~~--~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDE------NE--PTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccC------CC--cccCCc
Confidence 67999999999999999999999999999999999999963 2221111110000 0000000 00 001123
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCCCChhhhhc--CCeeEEecCc--hHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~--AdvGIa~~~~--~~~a~~aADivl~~~~l~~i~~ 369 (508)
.|...++.+.++ ...++++||+.||..|.+. ++++++.+.. .+.....+|+++.+ +..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 477777766654 3579999999999999887 5666666532 23344568988854 666654
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.36 E-value=2e-06 Score=82.31 Aligned_cols=135 Identities=15% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCC-CCC-CccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYP-SSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
+++|++.++++.|++.|+++.++||-....+..+.+.+ +... .+. ...+.++.... ..+..... -+..-.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~~~----~~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPCDE----HCQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCccc----cccccC
Confidence 57999999999999999999999999999999988887 6431 110 11122211100 00000000 000000
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHh--hcchhccCCChhHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS--AADIVLTEPGLNVIITAV 371 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~--aADivl~~~~l~~i~~~i 371 (508)
...|..+++.++..+..|+|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ .+|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1247888888888778899999999999999999997773311122111 133333 4566666554
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.2e-06 Score=78.41 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchh---hhhhcCChhHHhhhcceEee-
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRD---ESIVALPVDELIEKADGFAG- 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~a~- 302 (508)
++++++.+.++.|++.|+++.++|+........+.+..|+.... . .++...... ......+ .++..+..
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~~~~~g~~~~~~-----~~~~~~~~~ 144 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-I-EIYSNPASFDNDGRHIVWP-----HHCHGCCSC 144 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-e-EEeccCceECCCCcEEEec-----CCCCccCcC
Confidence 67899999999999999999999999999999999988885321 1 111111000 0000000 00001111
Q ss_pred cChhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 303 VFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
.....|..+++.++.. ...++++|||.||..|.+.||+-.|
T Consensus 145 ~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223588999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.9e-06 Score=77.94 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=69.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+++++.+.++.+++.|++++++||.....+..+++.+|+.. .+.......++. .+... . ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g--~~~g~----~----~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNG--LLTGP----I----EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCC--EEeCc----c----CCcccCCcch
Confidence 57999999999999999999999999999999999999852 111111100000 00000 0 0001245678
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCCCChhhhhcC
Q 010523 308 KYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 338 (508)
Q Consensus 308 K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~A 338 (508)
|...++.+.+. ...++++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.6e-06 Score=77.93 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=88.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ..++.++... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 357899999999999999999999999999999999999985321 1111111100 011123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
+--..+++.++.....++++||+.||+.+.+.+++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 32344555565566789999999999999999998 566542 2334445688887 5688888777643
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.6e-06 Score=77.43 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=76.3
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~ 304 (508)
.++++++.+.|+.+++.|++++++||.....+..+++.+|+.. .+......+++. ..... +. ..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g--~~~g~----------~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDG--IYTGN----------IDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCC--EEeCC----------ccCCCCC
Confidence 4579999999999999999999999999999999999999853 211111110000 00000 00 1234
Q ss_pred hhhHHHHHHHHhh-cC---CEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 305 PEHKYEIVKHLQA-RN---HICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 305 P~~K~~iV~~l~~-~g---~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
++.|...++.+.+ .+ ..+.++||+.+|.+|++.|+.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 5778877766544 33 368999999999999999999998863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.12 E-value=1e-05 Score=78.96 Aligned_cols=147 Identities=16% Similarity=0.141 Sum_probs=96.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC--C--CCc-cccCC-c-hhh---------------
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--Y--PSS-ALSGQ-D-RDE--------------- 283 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~--~--~~~-~~~~~-~-~~~--------------- 283 (508)
.+..|...++++++++.|+.++++||........+.+.+++.... + ++. ++.+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 345688899999999999999999999999999999988875431 1 111 11110 0 000
Q ss_pred --hhh---cC--------------------C----h---hHHhhh----cce-Ee-----ecCh--hhHHHHHHHHhhc-
Q 010523 284 --SIV---AL--------------------P----V---DELIEK----ADG-FA-----GVFP--EHKYEIVKHLQAR- 318 (508)
Q Consensus 284 --~~~---~~--------------------~----~---~~~~~~----~~v-~a-----~~~P--~~K~~iV~~l~~~- 318 (508)
... .. . . .+.+.. ..+ ++ .+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 00 0 0 000110 000 11 2343 3677777777653
Q ss_pred ---CCEEEEEcCCCCChhhhhc-CCeeEEecCchHHHHhhcc-------hhccCCChhHHHHHHH
Q 010523 319 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 372 (508)
Q Consensus 319 ---g~~v~~vGDG~ND~~al~~-AdvGIa~~~~~~~a~~aAD-------ivl~~~~l~~i~~~i~ 372 (508)
...|+++||+.||.+|++. ++.|++|+++.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887654 6666667788888776
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=76.59 Aligned_cols=127 Identities=19% Similarity=0.212 Sum_probs=92.4
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
...+-|++++++..|+++|++..++|++....+..+.+..|+..-.. .+..++.. ....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~-----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDV-----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCC-----------------CCCCcC
Confidence 34577899999999999999999999999999999999999964321 11111100 112235
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCC---eeEEecC--chHHHHhhcchhccCCChhHHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad---vGIa~~~--~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
|.....+++.+......++||||..+|..|-++|+ ||+..|. ........+|+++.+ +..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHHh
Confidence 66666666776666557999999999999999998 6666663 345566779999844 777665543
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.7e-05 Score=74.94 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++||.....+....+.+|+.... . .++..++. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCcC-----------------CCCCCChH
Confidence 57899999999999999999999999998888888888884311 1 11111000 01122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--c--CchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--A--DATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~--~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+++.++-....|+||||+.+|..+-+.+++. |++ | ...+..+..+|+++. ++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 33445555555567899999999999999999984 333 3 233445667898874 466665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.2e-05 Score=67.87 Aligned_cols=118 Identities=15% Similarity=0.076 Sum_probs=75.7
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
....++.+++.+.+++|++.|++++++||.....+....+.+|+... ...++........... ...........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPK-EGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhccc-ccccccccccccCC
Confidence 34558899999999999999999999999999999999999887311 1111111100000000 00000011112334
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcC-CeeEE
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA-DIGIA 343 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~A-dvGIa 343 (508)
-.|+.+..+.+.+......++++||+.+|..|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 456666666677666667899999999999999984 44554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.95 E-value=1e-05 Score=78.33 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc----hhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD----ivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.++ | ..|+++||+.||.+|++.+++||+|+++.+..+..|| +|...++-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877654 3 3689999999999999999999999999999999999 7877888889998886
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.4e-05 Score=72.02 Aligned_cols=123 Identities=17% Similarity=0.166 Sum_probs=82.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++..+... .....|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6799999999999999999999999999999888999985321 1111111100 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cC-c-hHHHHhhcchhccCCChhHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--AD-A-TDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~-~-~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-..+++.++.....+++|||+.+|..+-+.|++- |++ +. . .+.....+|+++. ++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3445555554556799999999999999999983 333 32 2 2233456888774 577776654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=7.6e-05 Score=73.90 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.+++.++++.|++.|+++.++||.....+..+....|+.... ..++.+++.. .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 367899999999999999999999999998888888888874311 1111111000 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC----chHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+--..+.+.+.-....|+||||+.||..+.+.|++ .+++.. ..+.....+|.++. ++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 21223444444345679999999999999999997 344432 23334457888884 4777765433
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.1e-05 Score=71.95 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3445567999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.79 E-value=7e-05 Score=70.98 Aligned_cols=122 Identities=15% Similarity=0.167 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ..++.++... .....|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985321 1111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cCc--hHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADA--TDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~~--~~~a~~aADivl~~~~l~~i~~ 369 (508)
-=..+.+.++.....++++||+.+|..+.+.|++- |.+ |.. .+.....+|+++.+ +..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 22334444444456799999999999999999985 334 211 22233468888743 665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0001 Score=78.36 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
|+++++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.++. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 4789999999999999999999999999999999999997221 111111 1135566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA 350 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~ 350 (508)
.|.+.++..... +.+.++||..||.++++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 776654432222 2267899999999999999999999855433
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00023 Score=67.95 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+.+.++|+.|++.|++++++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44889999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00019 Score=70.15 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+++.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 357899999999999999999999999999998888888854321 2222221110 1122333
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCee-EEe
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
-=....+.+.-. ...|+||||..+|..+-+.|++- |++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 333444444432 45699999999999999999973 444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00016 Score=69.67 Aligned_cols=124 Identities=14% Similarity=0.152 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 46899999999999999999999999988888888888874321 111111110 01223344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cCc--h-HHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADA--T-DAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~~--~-~~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.++-....|+||||+.||..+-+.|++. |++ |.. . ......+|+++.+ +..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 34455666666677899999999999999999975 333 321 1 2233568888844 66665543
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=9.6e-05 Score=70.74 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+........+.+.+|+..-. ..++.++.. ......|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCHH
Confidence 56799999999999999999999999999999999999885321 111111100 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeE-EecCc---hHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVADA---TDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGI-a~~~~---~~~a~~aADivl~~~~l~~i~ 368 (508)
-=..+.+.+.-....|+++||..||+.+.+.|++.. .+..+ .+.-...+|+++.+ +..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 222233333333467999999999999999999854 33322 11222356777643 65554
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=69.25 Aligned_cols=140 Identities=9% Similarity=0.085 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHh-CCCcEEEEcCCcHHHHHHHHHHhCCC--CCC----C--CCc----cccCCchh-------hhhh
Q 010523 227 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMG--TNM----Y--PSS----ALSGQDRD-------ESIV 286 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~-~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~----~--~~~----~~~~~~~~-------~~~~ 286 (508)
.+-+++.++|++|++ .|+.++++||+....+..+...+++. ... . ... .+..+... +...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999997 79999999999999988887766542 100 0 000 00000000 0000
Q ss_pred ---------------------cCC---hhHH----hhhc--------ceEeecChh--hHHHHHHHHhhc----CCEEEE
Q 010523 287 ---------------------ALP---VDEL----IEKA--------DGFAGVFPE--HKYEIVKHLQAR----NHICGM 324 (508)
Q Consensus 287 ---------------------~~~---~~~~----~~~~--------~v~a~~~P~--~K~~iV~~l~~~----g~~v~~ 324 (508)
..+ ...+ .... ..+.++.|. +|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000 0001 1010 012233443 677777766543 357999
Q ss_pred EcCCCCChhhhhcC----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 325 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 325 vGDG~ND~~al~~A----dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+||+.||.+||+.+ +.||+||++. ..|++.|.+ ...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999875 457777754 555555443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00052 Score=67.70 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++||.....+..+-+.+|+..-.. ..++.+++.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 457899999999999999999999999988877777777643211 1222211100 1112233
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCe
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI 340 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~Adv 340 (508)
-=....+.+.-. ...|+||||+.+|..+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 223334444433 3579999999999999999997
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00032 Score=66.92 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=80.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
.++.+|+.+.++.|++.|+++.++|+-....+..+.+.+|+.. +.+ ..++.+.+.. ...-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 3688999999999999999999999999999999999998852 211 1222221110 01122
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCeeE--EecCc--h--HHHHhhcchhccCCChhHHHHH
Q 010523 305 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVADA--T--DAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~AdvGI--a~~~~--~--~~a~~aADivl~~~~l~~i~~~ 370 (508)
|+-=....+.+.-. ...++||||+.+|..+-+.|++.. ++..+ + ......+|.++. ++..+...
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 33223333444333 367999999999999999999975 34322 1 122345777764 46655443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=65.20 Aligned_cols=134 Identities=10% Similarity=0.056 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC---C-ccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP---S-SALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...... . ..+..+. .+...+ .+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG---vltG~~-~P--------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG---VLKGFK-GP--------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC---eEeCCC-CC---------
Confidence 35799999999999999999999999999999999999998422110 0 0011100 000000 00
Q ss_pred ecChhhHHHHHH-----HHh--hcCCEEEEEcCCCCChhhhhcC---CeeEEec--Cc-----hHHHHhhcchhccCCCh
Q 010523 302 GVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 364 (508)
Q Consensus 302 ~~~P~~K~~iV~-----~l~--~~g~~v~~vGDG~ND~~al~~A---dvGIa~~--~~-----~~~a~~aADivl~~~~l 364 (508)
-+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| +. -+.-.++=|||+.+|.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 011134554333 222 2346799999999999997654 2223333 32 22355778999998766
Q ss_pred hHHHHHHH
Q 010523 365 NVIITAVL 372 (508)
Q Consensus 365 ~~i~~~i~ 372 (508)
-.++..|.
T Consensus 267 ~~v~~~il 274 (277)
T TIGR01544 267 LEVANSIL 274 (277)
T ss_pred chHHHHHH
Confidence 55655543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00049 Score=65.42 Aligned_cols=105 Identities=12% Similarity=0.010 Sum_probs=74.1
Q ss_pred CCCcchHHHH-HHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I-~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.. +-+.+.... .+ ..-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~t--------g~-~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYG--------GW-VLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEc--------cE-ECCccC
Confidence 3488999999 5788899999999999999999999999861 1111 100000000 00 011236
Q ss_pred ChhhHHHHHHHH-hhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 304 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 304 ~P~~K~~iV~~l-~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
.-++|..-++.. ......+.+-||+.||.|||+.|+.++++..
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888766644 3344567789999999999999999999974
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00014 Score=76.26 Aligned_cols=72 Identities=25% Similarity=0.237 Sum_probs=54.7
Q ss_pred eecChh--hHHHHHHHHhhc-------CCEEEEEcCCCCChhhhhcCC-eeEEecCchHHHHhhc--------chhc-cC
Q 010523 301 AGVFPE--HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVL-TE 361 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~-------g~~v~~vGDG~ND~~al~~Ad-vGIa~~~~~~~a~~aA--------Divl-~~ 361 (508)
..+.|. .|..-++.|.++ ...|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++. .+
T Consensus 167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~ 246 (413)
T PLN02382 167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATE 246 (413)
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCC
Confidence 344554 488877777554 347899999999999999999 6999999999888753 3332 35
Q ss_pred CChhHHHHHHH
Q 010523 362 PGLNVIITAVL 372 (508)
Q Consensus 362 ~~l~~i~~~i~ 372 (508)
++-++|.++|.
T Consensus 247 ~~~~GI~~al~ 257 (413)
T PLN02382 247 RCAAGIIQAIG 257 (413)
T ss_pred CCccHHHHHHH
Confidence 56788888876
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00054 Score=66.85 Aligned_cols=116 Identities=12% Similarity=0.153 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+.... ..++.+++.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1122221110 1122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec--Cc-hHHHHhhcchhccC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA--DA-TDAARSAADIVLTE 361 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~--~~-~~~a~~aADivl~~ 361 (508)
--....+.++-....++||||..+|..+-+.|++- |++. .. .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 33445555555567799999999999999999974 3343 22 22223468888755
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0006 Score=67.07 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999853
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.001 Score=65.88 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++.++.. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC------------------C--CCHH
Confidence 46789999999999999999999999999999999999985321 1 11111100 0 0111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC--c--hHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--A--TDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~--~--~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.++-....|+||||+.+|..+-+.|++- |++.. . .+.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11222333333456799999999999999999974 33332 1 223345689888 4477777654
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0026 Score=67.75 Aligned_cols=174 Identities=21% Similarity=0.254 Sum_probs=116.4
Q ss_pred cEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc------------------c
Q 010523 216 WQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL------------------S 277 (508)
Q Consensus 216 l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~------------------~ 277 (508)
-.|.|++.+.-+++++....|+.|-++-|+.+-.+-.+....+-+|.++||......-..+ .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3699999999999999999999999999999999999999999999999984311100000 0
Q ss_pred C---------------Cchhhhhhc----------------------------CC-----hhHHhh-------hcceEee
Q 010523 278 G---------------QDRDESIVA----------------------------LP-----VDELIE-------KADGFAG 302 (508)
Q Consensus 278 ~---------------~~~~~~~~~----------------------------~~-----~~~~~~-------~~~v~a~ 302 (508)
+ +...+.+.. ++ +...+. -...|.+
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 000000000 00 000011 1125889
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCC--hhhhhcCCeeEEecCc-------------hHH-HHhhcc----------
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVND--APALKKADIGIAVADA-------------TDA-ARSAAD---------- 356 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND--~~al~~AdvGIa~~~~-------------~~~-a~~aAD---------- 356 (508)
++|+.-.++|+.+|+.|.+++.+|...|- .-.+-+||++|++..- +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 99999999999999999999999998874 3456789999998631 111 111222
Q ss_pred -------hhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 357 -------IVLTEPGLNVIITAVLISRAIFQRMRNYMVRGI 389 (508)
Q Consensus 357 -------ivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~ 389 (508)
+-+....+-.+.++|+-+|.-..-+|+.++|.+
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 222222344567778888887788888777765
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00092 Score=65.72 Aligned_cols=121 Identities=18% Similarity=0.114 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4688999999999999999999999999999999898888532 11222221110 1122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec-CchHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA-DATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~-~~~~~a~~aADivl~~~~l~~i~ 368 (508)
-=...++.++-....|+||||..+|+.+-+.|++- |++. ..+......+|+++.+ +..+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 22344555555566799999999999999999983 3443 2222222357877644 55443
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00082 Score=61.82 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=60.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH--------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG 299 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~--------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (508)
+-|++.+++++|++.|+++.++|+.... .....-+..|+..- +......+++. .
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12222334454210 00000000000 0
Q ss_pred EeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 300 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
...-.|+-=..+++.+....+.|+||||..+|..+-+.|++- |++.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 112233333455555555556799999999999999999974 4454
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.001 Score=63.19 Aligned_cols=107 Identities=11% Similarity=0.023 Sum_probs=72.9
Q ss_pred CCCcchHHHHH-HHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~-~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++|++.++|+ .+++.|++++++|+-....+..+++..++... ..++ +-+.+.. .. .+ ..-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g-------g~-~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG-------GW-VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC-------ce-EcCccCCC
Confidence 36899999995 78889999999999999999999988655210 0011 0000000 00 00 01134667
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 306 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 306 ~~K~~iV~~l-~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
++|..-++.. ......+.+-||+.||.|||+.||.++++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888766644 3233456789999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=70.31 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 67899999999999999999999999999999999999884321 1122211110 011232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC--chHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD--ATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~--~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
--....+.+ ....|+++||..+|+.+-+.|++ .|++.. ..+.....+|+++. ++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHHH
Confidence 112222222 24579999999999999999997 455532 22222345788874 477777766544
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00065 Score=63.69 Aligned_cols=94 Identities=19% Similarity=0.137 Sum_probs=66.7
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
.+++.+++.++++.|++.|+++.++||.....+..+-+.+|+..-. ..++.+++ +.....
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 3446677899999999999999999999999999999999985321 11111111 111334
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcC
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 338 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~A 338 (508)
|+--..+++.++-....|+||||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444555666665667899999999999876654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0014 Score=62.45 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. + ..++.+++. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 468999999999999999999999988776666656666631 1 111111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch-HHHHhhcchhccC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 361 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~-~~a~~aADivl~~ 361 (508)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33344455555567899999999999999999984 6665332 2223456776643
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0023 Score=69.86 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.-+.+.++|++|+++|++++++||.....+..+.+++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3357799999999999999999999999999999999974
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0018 Score=62.47 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=64.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
.|.+++.+.++.+++.|+++.++||.. ..++..+.+..|++...+...++.++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 367889999999999999999999964 568888888899952211122222211
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 303 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++ +|.+.
T Consensus 172 ~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v~ 211 (237)
T PRK11009 172 PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARGIRIL 211 (237)
T ss_pred CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcEEEEe
Confidence 0113344433 3444 48999999999999999998 45553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0013 Score=62.59 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|++++++|+-....+....+.+|+.... ..++.+++. ....-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEeccC-----------------CCCCCCHH
Confidence 46889999999999999999999999888888888888874211 111111110 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEec
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVA 345 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~ 345 (508)
-=..+.+.+.-....++||||.. +|+.+-+.|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22233444444456799999998 99999999997 45555
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0046 Score=69.86 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=46.7
Q ss_pred hhHHHHHHHHhhc--CCEEEEEcCCCCChhhhhcC---CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~A---dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
-+|...++.+.+. ...++++||+.||.+||+.+ +.+|+||++ +.+|++.+.++ ..+...+.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 3688888887764 35799999999999999986 588888874 46788988753 55555544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0018 Score=61.02 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 265 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg 265 (508)
++.+.+.++|++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0024 Score=65.67 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+|+.++++.|++.|+++.++|+.....+..+-+.+||.... ..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999984311 1111111110 0112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCchHHH-HhhcchhccCCChhHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAA-RSAADIVLTEPGLNVI 367 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~~~a-~~aADivl~~~~l~~i 367 (508)
-=...++.++-....|+||||..+|+.|-+.|++- |++..+.... ...+|+++.+ +..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 33445555655677899999999999999999984 4444322221 2347877744 5544
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0023 Score=64.17 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=75.6
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+... . +.+.. ...++. ..-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i-~-~~~~~--------~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL-I-GRPPD--------MHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh-h-CCcch--------hhhccc-CCCCC
Confidence 3678899999999999999999999999999999999999988853111111 1 11100 000000 00123
Q ss_pred cChhhHHHHHHHHhh-cCCEEEEEcCCCCChhhhhcCCee
Q 010523 303 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~-~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 456667777766544 347899999999999999999985
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0021 Score=60.14 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+++++|++.|+++.++|+-+........+.+|+... +. .++..++.. .....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~~-----------------~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-FD-AVLSADAVR-----------------AYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-hh-eeEehhhcC-----------------CCCCCHH
Confidence 4679999999999999999999999998888888888887421 11 111111100 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+.+.+.-....+++|||+.+|+.+-+.+++-
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11334444544566799999999999999999874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0043 Score=57.96 Aligned_cols=144 Identities=20% Similarity=0.299 Sum_probs=94.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-------cCCchhhhhh------cCChhHHh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-------SGQDRDESIV------ALPVDELI 294 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~-------~~~~~~~~~~------~~~~~~~~ 294 (508)
+-|++.++.+.|+.. ...+++|---..-+..+|..+|++.......-+ -.....+.+. ..+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 468999999998876 455566666777889999999995422211111 1111111111 11222333
Q ss_pred hhc-ceEeecChhhHHHHHHHHhhc------------------CCEEEEEcCCCCChhhhhcCC-e-eEEec-CchHHHH
Q 010523 295 EKA-DGFAGVFPEHKYEIVKHLQAR------------------NHICGMIGNGVNDAPALKKAD-I-GIAVA-DATDAAR 352 (508)
Q Consensus 295 ~~~-~v~a~~~P~~K~~iV~~l~~~------------------g~~v~~vGDG~ND~~al~~Ad-v-GIa~~-~~~~~a~ 352 (508)
++. ++|.+..|..-.+|++.++.- ....+++||++.|+.||+.+. - |+|++ ||.+-|-
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 332 367787777655555544432 223689999999999999885 2 47777 7878788
Q ss_pred hhcchhccCCChhHHHHHHH
Q 010523 353 SAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 353 ~aADivl~~~~l~~i~~~i~ 372 (508)
..||+.+..++...+...|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999998888776
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0017 Score=62.62 Aligned_cols=91 Identities=21% Similarity=0.245 Sum_probs=62.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD----~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... + ..++.++... ..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------CC
Confidence 4555999999999999999999998 66789999999999531 1 1222221110 01
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEe
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 344 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~ 344 (508)
.| +|. ..+++.+ .++|+||..||..+-+.|++ +|++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 232 2344444 48999999999999999987 3444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0024 Score=63.65 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.+.++.|++.|+++.++|+-.......+-...+... .... .++.+++. ......|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 468899999999999999999999988877766555443211 0000 01111100 0112223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=..+.+.+.-....++||||+.+|+.+-+.|++. |++..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 333444555555566799999999999999999985 334322 11112357777743
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0052 Score=56.80 Aligned_cols=127 Identities=20% Similarity=0.152 Sum_probs=71.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+.|++.+++++|++.|+++.++|..... ....+-+..|+. +...+.......+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LDGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cceEEECCCCCCCC--------
Confidence 5799999999999999999999987621 111222334441 11100000000000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch--H-HHHhhc--chhccCCChhH
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT--D-AARSAA--DIVLTEPGLNV 366 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~--~-~a~~aA--Divl~~~~l~~ 366 (508)
.....-.|+--..+++.+.-....++||||..+|+.+-+.|++. |.+..+. . .....+ |+++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 00112233433445555555567899999999999999999974 3343221 1 122234 7776 34666
Q ss_pred HHHHHH
Q 010523 367 IITAVL 372 (508)
Q Consensus 367 i~~~i~ 372 (508)
+.+.+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 665543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0019 Score=59.62 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+... +....+.+|+.... ..++.+.+. ......|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 4679999999999999999999997532 34566777774221 111111100 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=....+.+.-....|+||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22233344433345699999999999999999974
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0026 Score=61.06 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++|+.....+...-+..|+... + ..++.+++.. ...-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~-----------------~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG-----------------YPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC-----------------CCCCCHH
Confidence 5689999999999999999999999888888777777777421 1 1111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecC
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 346 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~ 346 (508)
-=....+.+.-....|+||||..+|+.+-+.|++. +++.+
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 11223344444456799999999999999999995 44554
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0011 Score=59.89 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=68.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|++++++|+..........+.+|+... +. .++..++.. .....|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f~-~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-FD-EIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-CS-EEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-cc-cccccchhh-----------------hhhhHHH
Confidence 4688999999999999999999999999999999999998521 11 111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+++.++-....+++|||+..|+.+-+.|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22445566655677899999999999999998874
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0037 Score=59.46 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++. +++.++|+-....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4678999999999999 999999999988888888888885321 1111111000 0111222
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCC-CChhhhhcCCe-eEEecC--chHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHL-QARNHICGMIGNGV-NDAPALKKADI-GIAVAD--ATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l-~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~--~~~~a~~aADivl~~~~l~~i~~ 369 (508)
-=...++.+ .-....+++|||.. +|..+-+.+++ +|.+.. .+......+|.++. ++..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 123344444 43456799999998 89999999997 344432 22112234555653 3555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0024 Score=62.32 Aligned_cols=60 Identities=25% Similarity=0.358 Sum_probs=50.2
Q ss_pred EeecCh--hhHHHHHHHHhhcCCEEEEEcC----CCCChhhhhcC-CeeEEecCchHHHHhhcchhc
Q 010523 300 FAGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 359 (508)
Q Consensus 300 ~a~~~P--~~K~~iV~~l~~~g~~v~~vGD----G~ND~~al~~A-dvGIa~~~~~~~a~~aADivl 359 (508)
+.++.| -+|..-++.|.++...|+++|| |.||.+||+.| -.|++++++.+..+..+.+++
T Consensus 179 ~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 345555 4799999999887889999999 99999999987 578888899999998887664
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0059 Score=53.15 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=63.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 298 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (508)
++.+++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999988 77777888888874210 00000
Q ss_pred eEeecChhhHHHHHHHHh-hcCCEEEEEcC-CCCChhhhhcCCee
Q 010523 299 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIG 341 (508)
Q Consensus 299 v~a~~~P~~K~~iV~~l~-~~g~~v~~vGD-G~ND~~al~~AdvG 341 (508)
....-.|+-=..+++.++ -....++|||| ..+|..+-+.+++-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 001112222234455552 45578999999 59999999998873
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0046 Score=55.93 Aligned_cols=108 Identities=14% Similarity=0.022 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce--EeecCh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG--FAGVFP 305 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~a~~~P 305 (508)
++|+-++.++.+++.+++++++|+........+-..++=...++...+.+.+..- ..-..+..+ .....-
T Consensus 74 Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i--------h~dg~h~i~~~~ds~fG 145 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI--------HIDGQHSIKYTDDSQFG 145 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE--------cCCCceeeecCCccccC
Confidence 6899999999999999999999998877666666655411111111111110000 000000000 112233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
.+|...|+.+.+....+.|+|||+.|.+|-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 57999999999999999999999999999888777554
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0064 Score=55.72 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... + ..++.+++. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 568999999999999999999999988777 555555777421 1 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 340 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv 340 (508)
-=..+.+.+......++++||...|+.+-+.+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3334445555556789999999999999998887
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0034 Score=57.81 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++.++. .....|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 57899999999999999999999987 5566677777774211 11111100 0011222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K--~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.. ..+.+.+......+++|||+.+|+.+-+.|++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 223333333346799999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0051 Score=63.98 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~-~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.+++.++++.|++.|+++.++|+.....+...-. ..|+.... ..++.+++. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 357999999999999999999999998887776554 56663211 111111110 0112223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=..+++.+.-....|+||||+.+|+.+-+.|++. |++..+ .......+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 322344455554567899999999999999999985 445432 22233446666533
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.01 Score=56.57 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|+ .|+++.++|+.....+...-+.+|+.... . .++.+++. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 68999999998888888777778874211 1 11111100 00111222
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCC-CChhhhhcCCee-EEecC-chH-HHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVAD-ATD-AARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~-ND~~al~~AdvG-Ia~~~-~~~-~a~~aADivl~~~~l~~i~~~i 371 (508)
-=..+++.+.-. ...|++|||.. +|+.+-+.|++- |.+.. +.. .....+|+++. ++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 222334444322 35799999998 799999999984 44442 211 11124677763 366665543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.015 Score=55.60 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH-HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~-ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.++|+.|++.|+++.++||-....... ..+..++.. .+ ..++.+++.+ .....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~---------------~~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE---------------VKQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh---------------ccCCCCCc
Confidence 467999999999999999999999987643322 222223311 00 1111111000 00011122
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~---~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~ 361 (508)
+-=...++.+. -....|+||||...|+.+-+.|++- |.+..+ +......+|+++.+
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~ 202 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSS 202 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcC
Confidence 22233444443 3346799999999999999999984 444322 21122356777644
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.019 Score=52.60 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=73.8
Q ss_pred HHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCC
Q 010523 189 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMG 267 (508)
Q Consensus 189 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~ 267 (508)
+.+.|.+.+.+-... ++. ..=...+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~--~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLV--YPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccc--cCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788888776543 111 00123567899999999999999999999988 57777777777763
Q ss_pred CCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEec
Q 010523 268 TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVA 345 (508)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~ 345 (508)
.. .+ ...-.|+-=..+.+.+......++||||.. .|..+-+.|++ +|.+.
T Consensus 85 ~~-------~~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 85 VL-------PH---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred EE-------cC---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 10 00 011122211223333333456799999998 79999999998 45454
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.031 Score=50.47 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=65.4
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~---~ia~~l---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
+|...+++.++++++++.|++++++||.....+. .....+ | ++. . ..+......-.... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g-~li~~~g~~~~~~~---------~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--G-PVLLSPDRLFAALH---------R 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--c-eEEEcCCcchhhhh---------c
Confidence 4677899999999999999999999999987774 444442 2 321 0 11111111100000 0
Q ss_pred cceEeecChh-hHHHHHHHHhh-----cCCEEEEEcCCCCChhhhhcCCee
Q 010523 297 ADGFAGVFPE-HKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 297 ~~v~a~~~P~-~K~~iV~~l~~-----~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.+.. ..|+ .|...++.+.+ ....++.+|++.+|+.+.++++|-
T Consensus 93 -e~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -cccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1111 2233 47777777766 346778899999999999887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0084 Score=53.46 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++.|++.++++.|++.|+++.++|.... ..+..+.+.+|+.... .........+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~~------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPADN------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCCCC-------
Confidence 3689999999999999999999998762 3455566777774110 00000000000
Q ss_pred HHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 292 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.....-.|+-=..+++.+.-....|+||||...|+.+-+.+++-
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00011111111233333443456799999999999999998874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.024 Score=52.04 Aligned_cols=112 Identities=8% Similarity=-0.036 Sum_probs=70.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
.......-.-++.|++.++++.|++.|+++.++|+- ....+..+-..+|+...- . ..++.....
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~--------~-------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG--------K-------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC--------C-------cccHHHhce
Confidence 345555556678899999999999999999999976 888888888888874100 0 000000000
Q ss_pred hcceEeecChhhH--HHHHHHHhhc------CCEEEEEcCCCCChhhhhcCCeeEEe
Q 010523 296 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 344 (508)
Q Consensus 296 ~~~v~a~~~P~~K--~~iV~~l~~~------g~~v~~vGDG~ND~~al~~AdvGIa~ 344 (508)
..+.+.-.+..| ..+.+.+.+. ...|+||||...|+.+-+.|++-...
T Consensus 100 -~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 -DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 011111111112 2345555432 45799999999999999999985443
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0082 Score=54.49 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCcccc----CCchhhhhhc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALS----GQDRDESIVA 287 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~~~----~~~~~~~~~~ 287 (508)
++-|++.+++++|++.|+++.++|.-. ...+..+...+|+. +...++. .++.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCC------
Confidence 356899999999999999999999742 34455666777773 1111111 0000
Q ss_pred CChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 288 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 288 ~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
-+..-.|+-=..+++.+......++||||+.+|..+-+.+++. |.+.
T Consensus 100 -----------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 100 -----------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 0011111111222333332345699999999999999999985 4443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0076 Score=58.78 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHH-----HHhhc---c-hhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSAA---D-IVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~-----a~~aA---D-ivl~~~~l~~i~~~i~ 372 (508)
..|...|+.|+++ ...|+++||+.||.+||..++-||.++|+.+. ..... . ++-..+.-.+|++++.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4699999988876 24688899999999999999999999998776 22222 2 3445566777887776
Q ss_pred H
Q 010523 373 I 373 (508)
Q Consensus 373 ~ 373 (508)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.01 Score=53.01 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
..+++.+.++.|++.|+++.++|+-....+....+.. +.. .+. .++..+ ++.....|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~-~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFD-LILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCc-EEEecC------------------CCCCCcCHHH
Confidence 3478999999999999999999999988888777664 321 111 111100 0111122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCC
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad 339 (508)
=..+.+.+.-.. .|++|||..+|..+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 233334444345 7999999999998877764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.021 Score=52.52 Aligned_cols=128 Identities=15% Similarity=0.124 Sum_probs=65.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+.|++.++|+.|++.|+++.++|.-... ....+-...|+.- ...........+ .. .+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~i~~~~~~~~~-~~--~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL---DGIYYCPHHPEG-VE--EFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc---cEEEECCCCCcc-cc--ccc-
Confidence 4689999999999999999999976631 1112222333320 000000000000 00 000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecCch---HHHHhhcchhccCCChhHH
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADAT---DAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~~~---~~a~~aADivl~~~~l~~i 367 (508)
....+..-.|+-=....+.+.-....++||||..+|+.+-+.|++. |.+..+. ......+|+++.+ +..+
T Consensus 100 ---~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~--~~el 174 (176)
T TIGR00213 100 ---QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS--LADL 174 (176)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc--HHHh
Confidence 0000111122222333344444456799999999999999999984 3443221 1122347888743 5443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.067 Score=55.16 Aligned_cols=68 Identities=24% Similarity=0.222 Sum_probs=48.0
Q ss_pred eecChh---hHHHHHHHHhhc-C---C---EEEEEcCCCCChhhhhc-----CCeeEEecCchHHHHhhcchhccCCChh
Q 010523 301 AGVFPE---HKYEIVKHLQAR-N---H---ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLN 365 (508)
Q Consensus 301 a~~~P~---~K~~iV~~l~~~-g---~---~v~~vGDG~ND~~al~~-----AdvGIa~~~~~~~a~~aADivl~~~~l~ 365 (508)
-++.|. +|...|+.+.+. | . .++++||+.||..||+. +++||+|+++... -.|++.|.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HH
Confidence 355563 898888877654 2 1 25899999999999996 6899999975532 357787744 56
Q ss_pred HHHHHHH
Q 010523 366 VIITAVL 372 (508)
Q Consensus 366 ~i~~~i~ 372 (508)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 6655554
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.018 Score=54.07 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++.|+++.++|+-... .....+.+|+... +. .++...+. .+....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-fd-~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-FD-FVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-cc-eEEeeccc-----------------CCCCCCHH
Confidence 46789999999999999999999976553 4556667776321 11 11111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvG 341 (508)
-=..+++.+.-....++||||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 22233444444457899999997 899998888763
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.074 Score=47.71 Aligned_cols=109 Identities=10% Similarity=0.194 Sum_probs=79.4
Q ss_pred HHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCC-CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 185 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD-PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 185 ~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D-~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
..+.+..+|.+.+.+-.++ +++. ..+ ..-|++.+=+.+++.+|+++.++|..+..-+...+..
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~---wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVP---WDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceec---ccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4677889999999886654 3333 222 2457888889999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhh---cCCEEEEEcCCC-CChhhhhcCC
Q 010523 264 LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKAD 339 (508)
Q Consensus 264 lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~---~g~~v~~vGDG~-ND~~al~~Ad 339 (508)
+|++- ++.-.-|-.+ .+-+.+++ ....|+||||.. .|+-+=+.++
T Consensus 83 l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 83 LGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred cCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 99851 2222233332 44444544 467899999985 7988877777
Q ss_pred e
Q 010523 340 I 340 (508)
Q Consensus 340 v 340 (508)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 6
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.013 Score=52.35 Aligned_cols=95 Identities=14% Similarity=-0.042 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++||++.+.++.|+ .++++.++|.-....+..+-+.+++... +...++.+++.. ..-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~-------------------~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV-------------------FVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc-------------------ccCCe
Confidence 56999999999998 5799999999999999999998887431 111222211110 01121
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
=...++.+......|++|||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233444456789999999999998877766554
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.042 Score=52.90 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHH--HhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRA--LSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l--~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
|+-|+.++.++.+ +..|+.+.++|--|.-.-..+-+.-|+.... . .+++....-+.-..+.+...- ..-|..+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f-~-~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF-S-EIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc-c-eEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 4678999999999 4589999999999988888888888875321 1 111111000000000011100 02244555
Q ss_pred h-hhHHHHHHHHhhc----C---CEEEEEcCCCCChhhhh---cCCeeE
Q 010523 305 P-EHKYEIVKHLQAR----N---HICGMIGNGVNDAPALK---KADIGI 342 (508)
Q Consensus 305 P-~~K~~iV~~l~~~----g---~~v~~vGDG~ND~~al~---~AdvGI 342 (508)
| -=|..+++.+.+. | .+|.+||||.||..... .+|+-.
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4 3688999888765 4 68999999999975442 455543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.037 Score=52.66 Aligned_cols=96 Identities=13% Similarity=0.183 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.| ++++.++|+.....+...-+..|+.... ...++.+.+.. .....|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 3568999999988 5999999999888887777777874321 11111111100 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
-=....+.+.-....|+||||..+|..+-+.|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2233444444445679999999999999999998654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.12 Score=50.85 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=57.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
..++-|++.+.++.+++.|+++.++|+.... .+...-+..|++..... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 4457799999999999999999999998743 33455566777532111 1122
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhh
Q 010523 302 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~ 336 (508)
+-....|..-.+.+.+...+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 21223455555566555567999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.035 Score=52.42 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=58.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~--a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
++.|++.++++.|++.|+++.++|...... ........++... +. .++.+.+. ....-.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~~-----------------~~~KP~ 154 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCLE-----------------GLRKPD 154 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeeec-----------------CCCCCC
Confidence 568999999999999999999999865432 2222222333111 00 00000000 001112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 347 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~ 347 (508)
|+-=..+.+.+.-....++||||...|+.+-+.|++- |.+.+.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 2222233344444456799999999999999999984 555443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.08 Score=45.99 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC-cHHHHHHHHHHhC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 265 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD-~~~~a~~ia~~lg 265 (508)
++.+++.++++.|++.|+++.++|+. ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.079 Score=62.25 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=77.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+-|++.+.++.|+++|+++.++|+-....+...-+.+|+....+. .++.+++.. ...-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~~-----------------~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAFE-----------------NLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcccc-----------------cCCCCHHH
Confidence 568999999999999999999999999888888888888421111 111111100 11122322
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC---chHHHHhhcchhccC
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD---ATDAARSAADIVLTE 361 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~---~~~~a~~aADivl~~ 361 (508)
=....+.+.-....|++|||..+|+.+-+.|++ -|++.. ..+.....+|+++.+
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 234455555556789999999999999999998 355542 233344567777754
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.052 Score=55.53 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+. +....+......+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd-------- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPED-------- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcc--------
Confidence 57899999999999999999999983 123345556666663 1111111000000
Q ss_pred HHhhhcceEeecChhh--HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe
Q 010523 292 ELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~--K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
...++ .|+. =..+.+.+.-....++||||+.+|..+-+.|++- |.+
T Consensus 99 ------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 99 ------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred ------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 00011 1221 1122222223347899999999999999999985 444
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.091 Score=47.89 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~------------~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
+-+++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 3456667777732 111111000
Q ss_pred hcceEeecChhhHHHHHHHHh--hcCCEEEEEcCCC--------CChhhhhcCCeeE
Q 010523 296 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 342 (508)
Q Consensus 296 ~~~v~a~~~P~~K~~iV~~l~--~~g~~v~~vGDG~--------ND~~al~~AdvGI 342 (508)
.+..-.|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001111222223344443 2346799999986 6999888887643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.17 Score=49.04 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=59.2
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHH--HHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 297 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~--~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (508)
|.+.-.+.+-|++.+++++|+++|+++.++|.-...... ...+.+|+....+ ..++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~-------------------- 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIIS-------------------- 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEc--------------------
Confidence 555566778899999999999999999999986654443 4557778742111 11111
Q ss_pred ceEeecChhhHHHHHHHHhh---cCCEEEEEcCCCCChhhhhcCC
Q 010523 298 DGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGVNDAPALKKAD 339 (508)
Q Consensus 298 ~v~a~~~P~~K~~iV~~l~~---~g~~v~~vGDG~ND~~al~~Ad 339 (508)
+... ....+.+.+++ .+..+.++||+.+|...+..++
T Consensus 76 ---s~~~--~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 76 ---SGEI--AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---cHHH--HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 1100 01122222222 3567999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.095 Score=50.10 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=64.1
Q ss_pred cCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChhHHhhhcceE
Q 010523 224 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
+.-++.+|+.+++++|++.|+++.++|.........+-+..+ +... +. ..+ . ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f------------------d-~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF------------------D-TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE------------------E-eCcc
Confidence 345688999999999999999999999988776665554432 2110 00 000 0 0111
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeE
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 342 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGI 342 (508)
..-.|+-=..+.+.+.-....++++||...|+.+-++|++-.
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 122233224455555555678999999999999999999854
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.055 Score=52.60 Aligned_cols=66 Identities=20% Similarity=0.193 Sum_probs=47.4
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcC--------CeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 303 VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 303 ~~P~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~A--------dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHH
Confidence 4455788877776543 35799999999999999998 4788885332 3567898885 46666555
Q ss_pred HH
Q 010523 371 VL 372 (508)
Q Consensus 371 i~ 372 (508)
+.
T Consensus 239 L~ 240 (244)
T TIGR00685 239 LG 240 (244)
T ss_pred HH
Confidence 43
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.24 Score=47.46 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=55.6
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~---a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
.-|.-|++.+.++.+++.|++|+++||..... +..--++.|++. +...++.+... .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d-------------------~ 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLED-------------------S 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCC-------------------C
Confidence 34678999999999999999999999999755 223334456642 11122221000 0
Q ss_pred ecC-hhhHHHHHHHHhhcCCE-EEEEcCCCCChh
Q 010523 302 GVF-PEHKYEIVKHLQARNHI-CGMIGNGVNDAP 333 (508)
Q Consensus 302 ~~~-P~~K~~iV~~l~~~g~~-v~~vGDG~ND~~ 333 (508)
+.+ -.-|...-+.+.+.|+. ++.+||..+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001 11166666677777765 678999988873
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.19 Score=57.45 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=31.1
Q ss_pred CCCcchHHHHHHH-HhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 227 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 227 ~~r~~~~~~I~~l-~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
.|-+++.+++++| ++.|+.|+++||+...+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 778999999999999888876644
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.28 Score=46.00 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=34.0
Q ss_pred chHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 231 ~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999999999999999999985
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.68 E-value=1.1 Score=46.11 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=43.3
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCCCChhhhhcC-----CeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~-------g~~v~~vGDG~ND~~al~~A-----dvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|...++.|-+. +..++++||...|-.||+.. ++||.+|.... ...|++.|. +.+.+...+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L~--dp~eV~~fL~ 356 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSLQ--DPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888877653 23689999999999999855 47777874221 256788884 4666665553
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.15 Score=47.79 Aligned_cols=101 Identities=10% Similarity=0.010 Sum_probs=59.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia-~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.++++.|++.|+++.++|.-+.......- +..++... + ..++...+. ....-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDL-----------------GMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEeccc-----------------CCCCCCH
Confidence 46899999999999999999999997765443322 11233110 0 001100000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD 346 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~ 346 (508)
+-=..+++.+.-....+++|||...|+.+-+.+++- |.+.+
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecC
Confidence 222334455544567799999999999999999984 44444
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.18 Score=46.46 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=59.4
Q ss_pred hHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHH
Q 010523 232 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 311 (508)
Q Consensus 232 ~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 311 (508)
..++++.|++. +++.++||.....+...-+.+|+.... ..++..++.. .....|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 36889998865 899999999999999988888884321 1122111100 111223222334
Q ss_pred HHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 312 VKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 312 V~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
.+.++.....|++|||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444544455699999999999999999974
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.17 Score=51.39 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~----lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
++.+++.++|+.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999988887 6663210 0111
Q ss_pred cChhhHHH----HHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec
Q 010523 303 VFPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 345 (508)
Q Consensus 303 ~~P~~K~~----iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~ 345 (508)
..+..|.. +.+.+.-....++||||...|..+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 22233444 34444434578999999999999999988876554
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.44 Score=43.41 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=80.9
Q ss_pred HHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCc--EEEEcCC-------cHHHHHH
Q 010523 189 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 259 (508)
Q Consensus 189 ~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~--v~mlTGD-------~~~~a~~ 259 (508)
+.+.|.|.+.+=.++ ++ ...=++.+-++..+.+++|++.+.. |+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888875544 11 1234677889999999999998875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhc-----CCEEEEEcCCC-CChh
Q 010523 260 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 333 (508)
Q Consensus 260 ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~-----g~~v~~vGDG~-ND~~ 333 (508)
+.+.+|++- -.+...-|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 013345676667888888765 67899999974 7877
Q ss_pred hhhcCC-eeEEe
Q 010523 334 ALKKAD-IGIAV 344 (508)
Q Consensus 334 al~~Ad-vGIa~ 344 (508)
+=...+ .+|-+
T Consensus 152 ~gN~~G~~tilv 163 (168)
T PF09419_consen 152 MGNRMGSYTILV 163 (168)
T ss_pred HhhccCceEEEE
Confidence 766655 34433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.22 Score=45.81 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+++++|+ .+++++|+-....+....+.+|+... +. .++..++.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999987 47999999998888888898888431 11 11111110000 000112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-=..+++.+......++||||...|+.+-+.+++.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344555555567899999999999998888874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.29 Score=45.92 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCC-cEEEEcCCcHHH
Q 010523 178 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAI 256 (508)
Q Consensus 178 ~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi-~v~mlTGD~~~~ 256 (508)
+.+-+...++.+.++|.|.--+. -+.=.=|+-|+..++|+.+++.|- .+.++|--|.-.
T Consensus 55 Wne~M~rv~k~Lheqgv~~~~ik--------------------~~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfF 114 (256)
T KOG3120|consen 55 WNELMDRVFKELHEQGVRIAEIK--------------------QVLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFF 114 (256)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHH--------------------HHHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhH
Confidence 44555667777888886532211 111112567899999999999996 999999999877
Q ss_pred HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh-hHHHHHHHHhhc------CC-EEEEEcCC
Q 010523 257 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-HKYEIVKHLQAR------NH-ICGMIGNG 328 (508)
Q Consensus 257 a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~K~~iV~~l~~~------g~-~v~~vGDG 328 (508)
...+-+..|+.+-. . .+++....-+....+.+...- .-.-|.++.|. =|..++..++.. .+ ++.++|||
T Consensus 115 Ie~~Lea~~~~d~F-~-~IfTNPa~~da~G~L~v~pyH-~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG 191 (256)
T KOG3120|consen 115 IEEILEAAGIHDLF-S-EIFTNPACVDASGRLLVRPYH-TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDG 191 (256)
T ss_pred HHHHHHHccHHHHH-H-HHhcCCcccCCCCcEEeecCC-CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCC
Confidence 77777776663210 0 001000000000000000000 00113333222 255666555443 22 79999999
Q ss_pred CCCh-hhhhcCCeeEEec
Q 010523 329 VNDA-PALKKADIGIAVA 345 (508)
Q Consensus 329 ~ND~-~al~~AdvGIa~~ 345 (508)
.||. |+++...--+||-
T Consensus 192 ~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 192 ANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CCCcCcchhcccCceecc
Confidence 9995 5555544444553
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=90.05 E-value=0.44 Score=48.08 Aligned_cols=47 Identities=26% Similarity=0.308 Sum_probs=37.8
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGM 266 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi 266 (508)
|++.-.+.+=+++.++|+.|++.|++++++|+....+...+. +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555555667799999999999999999999999976666666 45666
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.34 E-value=1.2 Score=42.62 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=72.5
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.|++.+.++.|++.|+.+.+.|+-....+..+...+|+.... ..++.+.+. .-..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv-----------------~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDV-----------------ARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHH-----------------hcCCCCC
Confidence 367899999999999999999999999999999999999985321 111111111 0112334
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
+-=..-.+.|.-....|+.+.|..|.+.|-++|+.- |++.
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~ 186 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVP 186 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEec
Confidence 443445555555677899999999999999999974 3443
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.00 E-value=0.99 Score=41.93 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=54.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.+ +.+++|.-+.......-+.+|+..- ++. .+. ..+.++... .
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~-f~~-~f~-------------------~i~~~~~~~-~ 131 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNAL-FPG-AFS-------------------EVLMCGHDE-S 131 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHh-CCC-ccc-------------------EEEEeccCc-c
Confidence 6789999999999875 5667776544443334455555210 000 000 001122111 1
Q ss_pred HHHHHH-HHhhc-CCEEEEEcCCCCChhhhhcC--Cee-EEecCc
Q 010523 308 KYEIVK-HLQAR-NHICGMIGNGVNDAPALKKA--DIG-IAVADA 347 (508)
Q Consensus 308 K~~iV~-~l~~~-g~~v~~vGDG~ND~~al~~A--dvG-Ia~~~~ 347 (508)
|.+++. .+++. ...++||||..+|+.+-++| ++- |.+..+
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 233333 22222 34688999999999999999 984 444433
|
2 hypothetical protein; Provisional |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=87.47 E-value=0.92 Score=44.07 Aligned_cols=43 Identities=23% Similarity=0.323 Sum_probs=36.6
Q ss_pred hHHHHHHHHhhcCCEEEEEcC----CCCChhhhhc-CCeeEEecCchHH
Q 010523 307 HKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDA 350 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGD----G~ND~~al~~-AdvGIa~~~~~~~ 350 (508)
+|..-++.|+ ....|+++|| |.||.+||+. .=.||++.+-.|.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 7999999999 7789999999 8999999997 5569999765443
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=87.27 E-value=0.39 Score=39.79 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.3
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~ 267 (508)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455557778899999999999999999999988765544444 556764
|
... |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=86.55 E-value=1 Score=43.27 Aligned_cols=89 Identities=22% Similarity=0.205 Sum_probs=54.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~---~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.=|++.+.++.+++.|++|..+||++.. ....--+..|+... ...++.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 34468999999999999999999998854 23333445565321 11111111100 0000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCCCChhh
Q 010523 304 FPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 334 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~a 334 (508)
..+-|...-+.+.++|+ +++.+||..+|..-
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12237777888888865 56789999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=85.69 E-value=4.4 Score=39.77 Aligned_cols=90 Identities=21% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH---HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia---~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
..|.=|++.+..+.+++.|++|+++||+....-..+. ++.|+.. ....++.+.... -.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~--~~~LiLR~~~D~-----------------~~ 203 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT--WEKLILKDPQDN-----------------SA 203 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC--cceeeecCCCCC-----------------cc
Confidence 4566789999999999999999999999864332233 3356642 111222211000 00
Q ss_pred ecChhhHHHHHHHHhhcCC-EEEEEcCCCCChh
Q 010523 302 GVFPEHKYEIVKHLQARNH-ICGMIGNGVNDAP 333 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~ 333 (508)
.-..+-|...-+.+.+.|+ +++.+||.-+|..
T Consensus 204 ~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 204 ENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred chhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 0111234444455555666 5678999988873
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.62 E-value=1.2 Score=42.88 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=53.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-|++.++++.|++. +++.++|..+... +..|+.... . .++..++.. ...-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~~~~~~~-----------------~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVLRAGPHG-----------------RSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeEecccCC-----------------cCCCcHH
Confidence 3568999999999875 8999999866541 445653110 0 111100000 0011121
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG-~ND~~al~~AdvGIa 343 (508)
-=....+.+.-....++||||. ..|+.+-+.|++-..
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 1122334444445679999999 599999999997533
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.87 E-value=3 Score=39.43 Aligned_cols=97 Identities=12% Similarity=0.176 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-+++.++++.++.. +++.++|--.........+++|+... +...+.++. +...-|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~~--------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISED--------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEecc--------------------cccCCCC
Confidence 3567889999999888 99999999888888888899996432 221111111 1112233
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCe-eEEec
Q 010523 307 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADI-GIAVA 345 (508)
Q Consensus 307 ~K--~~iV~~l~~~g~~v~~vGDG-~ND~~al~~Adv-GIa~~ 345 (508)
.+ ....+.+.-....++||||. .||+..-+.++. +|-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 22 23344444445689999997 478566666666 45554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=84.86 E-value=0.46 Score=46.55 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=66.4
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhh-----hcceEeecC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE-----KADGFAGVF 304 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~a~~~ 304 (508)
++..++++.|++.++++.+.|+.............|+.. +...+. +..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 677888999999999999998876543322222222210 000000 001122333
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEecCch---H---HHHhhcchhccCCChhHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVADAT---D---AARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~~~---~---~a~~aADivl~~~~l~~i~~~ 370 (508)
|+-=..+.+.+......++||||.. +|..+-+.+++ +|.+..+. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3333344455554567899999996 89999999987 45554331 1 1123466666 446666543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=83.44 E-value=5.3 Score=35.92 Aligned_cols=102 Identities=20% Similarity=0.157 Sum_probs=65.9
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHH---HHHh-----CCCCCCCCCccccC-CchhhhhhcCChhHHhhh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALSG-QDRDESIVALPVDELIEK 296 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~i---a~~l-----gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 296 (508)
|..++++.+..+.+++.|++++-+|+...--+..+ -... +++ +..++.. +..-..+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP----~Gpv~~sP~~l~~al~---------- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP----DGPVLLSPDSLFSALH---------- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC----CCCEEECCcchhhhhh----------
Confidence 68999999999999999999999999996444332 2333 332 1111111 11100000
Q ss_pred cceEeecChhhHHHHHHHHhhc-----CCEEEEEcCCCCChhhhhcCCee
Q 010523 297 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 341 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~~-----g~~v~~vGDG~ND~~al~~AdvG 341 (508)
-++..+-.-+.|...++.++.. ....+..|...+|+.+.+.++|-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0123343456788888888764 34677889989999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.74 E-value=5.2 Score=43.08 Aligned_cols=98 Identities=15% Similarity=0.070 Sum_probs=61.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCC------CccccCCchhhhhhcCChhHHhhhcceE
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYP------SSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
+++++.+. +++.|. ++++|+-...-+..+|++ +|++.-+-. ...++|.-.. -
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 45555544 456774 599999999999999987 898521100 1111111000 0
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
..+.-++|..-++..........+.||..||.|||+.|+-+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134466877666433211223789999999999999999999985
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=80.36 E-value=2.2 Score=38.66 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=52.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++ ++.++|.-+.......-+.+|+.... ..++++++. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 46889999998 37789998888888888888874211 011111100 01122232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhc
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 337 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~ 337 (508)
-=....+.+.-....|+||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 2234455555556789999999999876554
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=80.25 E-value=2.9 Score=41.46 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CC-cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 228 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 228 ~r-~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.05 E-value=1.8 Score=39.23 Aligned_cols=92 Identities=16% Similarity=0.045 Sum_probs=60.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
=..||++.+.++.|.+. +++++.|-.....|..+...++.....+.. ++..++. ... .|
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~-~l~r~~~-----------------~~~--~~ 99 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR-RLYRESC-----------------VFT--NG 99 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE-EEEcccc-----------------EEe--CC
Confidence 34799999999999987 999999999999999999998864211111 1111000 000 01
Q ss_pred hhHHHHHHHHh---hcCCEEEEEcCCCCChhhhhcCCeeE
Q 010523 306 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGI 342 (508)
Q Consensus 306 ~~K~~iV~~l~---~~g~~v~~vGDG~ND~~al~~AdvGI 342 (508)
.+++.|. .....|++|||...|..+-+.+.|-|
T Consensus 100 ----~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 100 ----KYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred ----CEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 1333333 33467999999998887666655544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.03 E-value=1.9 Score=42.06 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=39.1
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788899999999999999999999999998877777764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 508 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-152 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-61 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-19 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-19 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-19 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 6e-19 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 8e-16 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 8e-15 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-14 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 7e-13 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-06 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-06 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 9e-06 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 508 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 5e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-171 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-54 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 5e-54 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-43 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 6e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-29 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 8e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-26 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-25 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 3e-22 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-12 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 2e-11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 3e-07 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 9e-07 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-06 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 1e-06 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 3e-06 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 3e-06 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-06 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-06 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 545 bits (1406), Expect = 0.0
Identities = 292/384 (76%), Positives = 334/384 (86%)
Query: 1 MFAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMA 60
M+ IQ R+YR G++NLLVLLIGGIPIAMPTVLSVTMAIGS RLS QG ITKRM+AI +MA
Sbjct: 262 MYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 321
Query: 61 GMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGM 120
GMDVLC DKTGTLTLNKL+VDKNL+E+F GV+ D V+L AA AS+VEN D IDAA+VGM
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGM 381
Query: 121 LADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGR 180
LADPKEARA I+EVHFLPF+P KRTALTYID G HRV+KG+PEQIL L + + +
Sbjct: 382 LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSK 441
Query: 181 KVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240
KV ++I+K+AERGLRSLAVA Q VPE +KES G+PW+F+GL+PLFDPP HDSAETIRRAL
Sbjct: 442 KVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRAL 501
Query: 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300
+LG+ VKMITGDQLAI KETGRRLGMGTNMYPSSAL G +D ++ ++PV+ELIEKADGF
Sbjct: 502 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF 561
Query: 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 360
AGVFPEHKYEIVK LQ R HI GM G+GVNDAPALKKADIGIAVADATDAAR A+DIVLT
Sbjct: 562 AGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLT 621
Query: 361 EPGLNVIITAVLISRAIFQRMRNY 384
EPGL+VII+AVL SRAIFQRM+NY
Sbjct: 622 EPGLSVIISAVLTSRAIFQRMKNY 645
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 417 QTAFTSKKDFGKEERELLWAHAQRTLH 443
+TAFT KKD+GKEERE W H
Sbjct: 857 KTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 507 bits (1307), Expect = e-171
Identities = 151/392 (38%), Positives = 224/392 (57%), Gaps = 21/392 (5%)
Query: 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMD 63
+ L L + I G+P+ +P V++ TMA+G+ L+ + I +++SAI +AG++
Sbjct: 314 YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVE 373
Query: 64 VLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVEN--LDVIDAAIVGML 121
+LC DKTGTLT NKL++ GVD + ++L A A+ + +D ID A + L
Sbjct: 374 ILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSL 430
Query: 122 ADPKEARADIQE---VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKI 178
A++ + + + F PFDP K+ +G+ KG+P +L + I
Sbjct: 431 KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPI 490
Query: 179 G----RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 234
+ + +FA RG RSL VA + W+ +G++P DPP HD+ +
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPPRHDTYK 542
Query: 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 294
T+ A +LGL +KM+TGD + IA+ET R+LG+GTN+Y + L + + V + +
Sbjct: 543 TVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGD-MPGSEVYDFV 601
Query: 295 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA 354
E ADGFA VFP+HKY +V+ LQ R ++ M G+GVNDAP+LKKAD GIAV ++DAARSA
Sbjct: 602 EAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSA 661
Query: 355 ADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386
ADIV PGL II A+ SR IF RM Y+V
Sbjct: 662 ADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 3e-54
Identities = 102/444 (22%), Positives = 165/444 (37%), Gaps = 93/444 (20%)
Query: 24 IPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAI-----VDMAGMDVLCCDKTGTLTLNKL 78
+P + ++V +++ +KRL+ + + K + A+ V+C DKTGTLT N++
Sbjct: 342 VPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTS-----VICSDKTGTLTQNRM 396
Query: 79 TV-----DKNLIEIFAGGVDA----------------------DTVVLMAARASQVENLD 111
TV D ++ + A V
Sbjct: 397 TVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRI 456
Query: 112 VI----DAAIVGM----LADPKEARADIQEVHFLPFDPTGKR--TALTYIDSEGKMHRV- 160
VI + A++ L + R +V +PF+ T K + T D H +
Sbjct: 457 VIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLV 516
Query: 161 TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE 210
KG+PE++L L+ + G R L + E
Sbjct: 517 MKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYP 576
Query: 211 SSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ----LA 255
+ F GL+ + DPP + + + + G+ V M+TGD A
Sbjct: 577 PGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKA 636
Query: 256 IAKETG-------RRLGMGTNMYPSSALSGQDRDESIV-------ALPVDELIEKADG-- 299
IA G + + + + V + EL+E
Sbjct: 637 IAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHP 696
Query: 300 ---FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA-TDAARSAA 355
FA P+ K IV+ Q I + G+GVND+PALKKADIG+A+ A +DAA++AA
Sbjct: 697 EMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756
Query: 356 DIVLTEPGLNVIITAVLISRAIFQ 379
D++L + I+T V R IF
Sbjct: 757 DMILLDDNFASIVTGVEQGRLIFD 780
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 5e-54
Identities = 96/453 (21%), Positives = 169/453 (37%), Gaps = 101/453 (22%)
Query: 19 LLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAI-----VDMAGMDVLCCDKTGTL 73
+++ +P + ++V + + +KR++ + + K + A+ +C DKTGTL
Sbjct: 332 IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTS-----TICSDKTGTL 386
Query: 74 TLNKLTVDKNLIEIFAGG--VDADTVVLMAARASQVENLDVIDAAIVGMLA--------- 122
T N++TV ++ +ADT + A + + + L
Sbjct: 387 TQNRMTVAH----MWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 123 ----------------------------DPKEARADIQEVHFLPFDPTGKR--TALTYID 152
+ R ++ +PF+ T K +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 153 SEGKMHRV-TKGSPEQILN-----LLHNKSK-----IGRKVNAVINKFAERGLRSLAVAY 201
S + + KG+PE+IL+ LL+ + + + G R L +
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562
Query: 202 QEVPEGSKESSGSPWQ-----------FIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 250
+PE F+GL+ + DPP + + + S G+ V M+T
Sbjct: 563 FALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVT 622
Query: 251 GDQ----LAIAKETG-------RRLGMGTNMYPSSALSGQDRDESIV-------ALPVDE 292
GD AIAK G + + ++ V L +
Sbjct: 623 GDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEV 682
Query: 293 LIEKADG-----FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA 347
L + FA P+ K IV+ Q + I + G+GVND+PALKKADIG+A+ +
Sbjct: 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 348 -TDAARSAADIVLTEPGLNVIITAVLISRAIFQ 379
+D ++ AAD++L + I+T V R IF
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 775
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-43
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 137 LPFDPTGKRTALTYIDSEGKMHRV-----TKGSPEQILNLLHNKSKIG----------RK 181
L F K ++ ++ V KG+PE +++ + K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 182 VNAVINKF--AERGLRSLAVAYQEVPEGSKESSGSPWQ----------FIGLIPLFDPPI 229
+ +VI ++ LR LA+A ++ P +E F+G++ + DPP
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALSGQDRDESIVA 287
+ +I+ G+ V MITGD A RR+G+ + A +G++ D
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD----D 661
Query: 288 LPVDELIEKADG---FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 344
LP+ E E FA V P HK +IV++LQ+ + I M G+GVNDAPALKKA+IGIA+
Sbjct: 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721
Query: 345 ADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 383
T A++A+++VL + + I+ AV RAI+ M+
Sbjct: 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-07
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 24 IPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDK 82
IP +P V++ +A+G++R++ + I + + ++ + V+C DKTGTLT N+++V K
Sbjct: 308 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-29
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
+ I + D P + + + + + GL + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
+ E + + PE K I++ L+ + MIG+GVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 382
AD+ +A+ + D +++ ADI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-29
Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 73/328 (22%)
Query: 59 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAA---RASQVENLDVIDA 115
+ + DKTGTLT + V +I D ++ +AA S+ I A
Sbjct: 10 AKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSE----HPIAA 61
Query: 116 AIVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN 174
AIV + ++ + EV F GK G R SP +
Sbjct: 62 AIV---EEAEKRGFGLTEVE--EFRAIPGKGVEGIV---NG--RRYMVVSP----GYI-- 105
Query: 175 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 234
++G K + + K ++G + + + G+I L D +S E
Sbjct: 106 -RELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADRIRPESRE 151
Query: 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELI 294
I + ++G+ M+TGD +AK LG +D+
Sbjct: 152 AISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------------LDDYF 187
Query: 295 EKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA 354
A V P K E VK +Q + ++ M+G+GVNDAPAL +AD+GIA+ TD A
Sbjct: 188 ------AEVLPHEKAEKVKEVQQK-YVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVET 240
Query: 355 ADIVLTEPGLNVIITAVLISRAIFQRMR 382
ADIVL + V +SR + +
Sbjct: 241 ADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 201
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 382
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 8e-27
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
+ + L+ + DP + ETI G+ + M+TGD A+ LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
+ +++ A + PE K IV L+ + I M G+GVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 383
KADIGIA+ TD A +A + L L I A +S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 112 bits (284), Expect = 1e-26
Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 78/342 (22%)
Query: 47 GVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQ 106
G++ K A+ + + DKTGTLT K V ++ D ++ +AA
Sbjct: 389 GILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAA---I 441
Query: 107 VENLDV--IDAAIVGMLADPKEARADIQEVHFLPFD-PTGKRTALTYIDSEG-KMHRVTK 162
E I AIV + + ++ + G+ G +
Sbjct: 442 AERRSEHPIAEAIVKKALEHGIELGEPEK-----VEVIAGE----------GVVADGILV 486
Query: 163 GSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 221
G+ L+ + + +V + K ++ VA + G+
Sbjct: 487 GNK----RLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGI 529
Query: 222 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDR 281
I + D + ++ +G+ V MITGD A+ R L
Sbjct: 530 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN---------------- 573
Query: 282 DESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 341
+D +I A V P K E VK LQA+ + +G+G+NDAPAL +AD+G
Sbjct: 574 --------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG 618
Query: 342 IAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 383
IAV +D A + DIVL L ++ A+ +SR M
Sbjct: 619 IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKT---MSK 657
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 1e-25
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
+ G+I + D + ++ +G+ V MITGD A+ R L
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN----------- 495
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
+D +I A V P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 496 -------------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 535
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMR 382
+AD+GIAV +D A + DIVL L ++ A+ +SR +++
Sbjct: 536 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 88.6 bits (219), Expect = 3e-22
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 457 SSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508
+++ EL+ +AEEA+RRAEIAR RELHTLKGHVES+++LKGLDI+ IQQSY +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-12
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 91 GVDADTVVLMAARAS--QVENLDVIDAAIV--GMLADPKEARADIQEVHFLPFDPTGKRT 146
G ++ V+ A S Q +++D A++ + + Q++ +PFD +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 147 ALTYIDSEGKMHRVTKGSPEQILNL---LHNKSKIG-------RKVNAVINKFAERGLRS 196
++ ++ V KG+ ++ILN+ + + +I RK+ V + +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 197 LAVAYQEVPEGSKESSGSPWQ---FIGLIPLFDPP 228
+AVA + +P + + G I D
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 2e-11
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 479 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 508
RELHTLKGHVE++++LKGLDI+ IQQSY +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 3e-07
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K V + + +GN V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 362 PG 363
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
+ K +K I +GN VND P +AVA A D R AA V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 362 PG 363
PG
Sbjct: 145 PG 146
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K + L I IG+ +NDA LK+ I A A R + I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 362 PG 363
G
Sbjct: 138 RG 139
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
+K L + I +G+ + D P ++K + +AVADA AD V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 362 PG 363
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 1e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K EI + ++ + + G IG+ V D +KK +AV +A + R A +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 362 PG 363
G
Sbjct: 143 NG 144
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K L + + IG+ D PA AVADA ++A D VL+
Sbjct: 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLST 141
Query: 362 PG 363
G
Sbjct: 142 HG 143
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K +HL+ + IG+ + D P +++ +G+AV++A AD
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 362 PG 363
G
Sbjct: 153 TG 154
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 4e-06
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
E K ++ L A + +G+ + D P +++ +G+AVA+A R A +
Sbjct: 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRA 152
Query: 362 PG 363
G
Sbjct: 153 QG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
K L A IG+ + D P + + + +AVADA A V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 362 PG 363
G
Sbjct: 183 KG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 5e-06
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 306 EHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
+ K + + + I G IG+ + D P ++K + + VAD A+ V
Sbjct: 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHI 158
Query: 362 PG 363
G
Sbjct: 159 KG 160
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 5e-06
Identities = 67/482 (13%), Positives = 137/482 (28%), Gaps = 179/482 (37%)
Query: 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMD 63
++ + Y N LLVLL + + + K L +T R + D
Sbjct: 238 LKSKPYE---NCLLVLL----NVQNAKAWNA-FNLSCKIL-----LTTRFKQVTD----- 279
Query: 64 VLCCDKTGTLTLNK----LTVDKNLIEIFAG--GVDADT------------VVLMAA--- 102
L T ++L+ LT D+ + + ++A
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
Query: 103 ---------RASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFD---PTGKRTALTY 150
+ + L I + + +L +P E R + P PT +L +
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVL-EPAEYRKMFDRLSVFPPSAHIPT-ILLSLIW 396
Query: 151 IDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE 210
D K ++N LH S ++ K + S+ Y E+ +
Sbjct: 397 FDVI-------KSDVMVVVNKLHKYS--------LVEKQPKESTISIPSIYLELKVKLEN 441
Query: 211 SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM 270
+ +H ++ D I K
Sbjct: 442 ---------------EYALHR---------------SIV--DHYNIPKT----------- 458
Query: 271 YPSSALSGQDRDESIVA-----LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 325
+ S L D+ + L E E+ F VF + ++ L+ +
Sbjct: 459 FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF-----LEQK------- 506
Query: 326 GNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYM 385
++ A +A+ S + + + + Y+
Sbjct: 507 ---------IRHDST------AWNASGSILNTLQQ-----------------LKFYKPYI 534
Query: 386 VRGIDGLSSTEFIQVLE--LNFLFTLDTVIA------ILQTAFTSKKDFGKEERELLWAH 437
+ ++ +++ L+FL ++ + +L+ A ++ + EE AH
Sbjct: 535 CD-----NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEE-----AH 584
Query: 438 AQ 439
Q
Sbjct: 585 KQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 46/309 (14%), Positives = 83/309 (26%), Gaps = 97/309 (31%)
Query: 271 YP--SSALSGQDRDESIVALPVDELIEKADGFAG---VFPEHKYEIV---KHLQARNH-- 320
Y S + + R S + IE+ D VF KY + +L+ R
Sbjct: 91 YKFLMSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALL 145
Query: 321 ---------ICGMIGNG--------VNDAPALKKADIGI---AVADATDAARSAADIVLT 360
I G++G+G K D I + + S ++
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN----CNSPETVLEM 201
Query: 361 EPGLNVIITAVLISRA------------IFQRMRNYMVRG--------IDGLSSTEFIQV 400
L I SR+ I +R + + + + +
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 401 LELN--FLFTLDTVIAILQTAFTSKKDF--GKEERELLWAHAQRTLHGLQPPDT-SMFS- 454
L+ L T T F DF + H L P + S+
Sbjct: 262 FNLSCKILLT---------TRFKQVTDFLSAATTTHISLDHHSM---TLTPDEVKSLLLK 309
Query: 455 -VRSSYGELSWMAEEARRR-----AEI-ARLRE--------LHTLKGHVESLIR--LKGL 497
+ +L E + I +R+ H + ++I L L
Sbjct: 310 YLDCRPQDLP---REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 498 DIDAIQQSY 506
+ ++ +
Sbjct: 367 EPAEYRKMF 375
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Query: 213 GSPWQFIGLIPLFDPPIHDSA-ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY 271
S + I L D I + E + + +I+G + +Y
Sbjct: 62 SSLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY 121
Query: 272 PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVND 331
+ A D G K ++ L N MIG+ V D
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTD 175
Query: 332 APALKKADIGIA 343
A K +D+ A
Sbjct: 176 VEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 303 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
+F K E++ LQ +I ++G+G ND K A I IA +A + + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 359 LTEPGLNVII 368
+ EP L +I
Sbjct: 197 INEPDLALIK 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 303 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
V + K +I+ L + + +G+G ND + A +G+A A + A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 359 LTEPGLNVII 368
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 303 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
+ K EI++ + I +G+G ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 359 LTEPGLNVII 368
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 325 IGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
IG+ ND P + A+ATD ++ +D V
Sbjct: 175 IGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-04
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 303 VFPEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
+ +K + + L AR +I G+G ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 359 LTEPGLNVII 368
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.97 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.96 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.82 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 99.48 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.47 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 99.44 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.36 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.32 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.31 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.3 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.26 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.23 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.2 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.07 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.02 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.0 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.97 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.92 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.9 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.89 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.88 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.87 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.86 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.85 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.85 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.83 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.83 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.77 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.76 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.75 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.72 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.71 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.68 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.68 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.66 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.63 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.62 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.49 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.46 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.46 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.46 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.46 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.45 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.44 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.42 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.42 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.38 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.37 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.29 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.29 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.27 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.26 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.26 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.26 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.25 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.24 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.24 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.24 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.23 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.22 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.22 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.2 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.19 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.18 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.15 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.15 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 98.13 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.13 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.12 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.11 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.11 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.1 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.09 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.07 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.07 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.06 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.05 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.03 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.03 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.02 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.0 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.98 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.96 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.94 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.94 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.94 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.93 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.89 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.88 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.88 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.87 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.87 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.86 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.83 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.81 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.79 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.78 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.78 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.72 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.62 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.6 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.57 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.51 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.51 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.43 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.42 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.37 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.34 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.27 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.24 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.22 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.12 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.99 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.95 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.89 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.89 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.85 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.85 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.84 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.72 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.57 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.54 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.45 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.35 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.2 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.86 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.7 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.56 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.53 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.43 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.03 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.92 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.65 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.92 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 93.68 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.28 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 92.21 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 91.87 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 90.69 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 89.63 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.65 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 87.87 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 87.06 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 86.26 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.08 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 83.07 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 82.18 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 80.8 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-78 Score=677.90 Aligned_cols=430 Identities=68% Similarity=1.043 Sum_probs=378.1
Q ss_pred cccccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEE
Q 010523 2 FAIQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVD 81 (508)
Q Consensus 2 ~~~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~ 81 (508)
|++.+++|.+++.+++++++++||||||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.
T Consensus 263 ~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~ 342 (885)
T 3b8c_A 263 YPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 342 (885)
T ss_dssp TTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCC
T ss_pred HHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEE
Confidence 44556789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEE
Q 010523 82 KNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVT 161 (508)
Q Consensus 82 ~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~ 161 (508)
+++++.+..+.+.++++.+++.++...+.||++.|++.++.++.+.+..++.++++||++.+|+|++++++.+|+.+.++
T Consensus 343 ~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~ 422 (885)
T 3b8c_A 343 KNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422 (885)
T ss_dssp SCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCC
T ss_pred EEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEE
Confidence 65544454567788899999999876567899999999988766566778889999999999999998887788888899
Q ss_pred cCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHh
Q 010523 162 KGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALS 241 (508)
Q Consensus 162 kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~ 241 (508)
||+||.++++|..+++.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|+++++||||++++++|++|++
T Consensus 423 KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~ 502 (885)
T 3b8c_A 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALN 502 (885)
T ss_dssp CCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHH
Confidence 99999999999866666777888899999999999999999998777777889999999999999999999999999999
Q ss_pred CCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCE
Q 010523 242 LGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHI 321 (508)
Q Consensus 242 ~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~ 321 (508)
+||+|+|+|||+..+|.++|+++||..+..+...+.|.+.++.+...++++++++..+|+|++|+||.++|+.+|++|+.
T Consensus 503 aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~ 582 (885)
T 3b8c_A 503 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHI 582 (885)
T ss_dssp TTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCC
T ss_pred cCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCe
Confidence 99999999999999999999999998766666677777766656777788999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-V 400 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~-~ 400 (508)
|+|+|||+||+|||+.|||||||++|++.|+++||+|+.+++|++|++++++||++|+||++|+.|.+..+...++.. .
T Consensus 583 Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~ 662 (885)
T 3b8c_A 583 VGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662 (885)
T ss_dssp CCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHH
T ss_pred EEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998655322211 1
Q ss_pred hhccccccHHHHHHHHHhhcccccccchhHH
Q 010523 401 LELNFLFTLDTVIAILQTAFTSKKDFGKEER 431 (508)
Q Consensus 401 ~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~ 431 (508)
..+.+.+|+.++++++..+++....++++.+
T Consensus 663 ~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~ 693 (885)
T 3b8c_A 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKD 693 (885)
T ss_dssp HHSSCSSCSCHHHHHHHHHHHHTTTCCCCCC
T ss_pred HHHccCcCcCHHHHHHHHHHHHHHHHhhccc
Confidence 2223446889999885555554444555443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-74 Score=644.11 Aligned_cols=417 Identities=37% Similarity=0.604 Sum_probs=354.3
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+.+|.+++.+++++++++||||||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++
T Consensus 314 ~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~ 393 (920)
T 1mhs_A 314 YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDP 393 (920)
T ss_dssp TTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCC
T ss_pred hcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred eeecccCCCChHHHHHHHHHhcccCCC--ChHHHHHHhhhcCc---hhhhccceEEEEecCCCCCceEEEEEEecCCeEE
Q 010523 84 LIEIFAGGVDADTVVLMAARASQVENL--DVIDAAIVGMLADP---KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMH 158 (508)
Q Consensus 84 ~i~~~~~~~~~~~~l~~aa~~~~~~~~--~~~~~ai~~~~~~~---~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~ 158 (508)
+. ..+.++++++..++.++...+. ||++.|++.++... ......++.++++||++.+|+|+++++..+|+.+
T Consensus 394 ~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~ 470 (920)
T 1mhs_A 394 YT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI 470 (920)
T ss_dssp BC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCE
T ss_pred ee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEE
Confidence 53 2345666777777766554444 89999999865321 1234567889999999999999999887778888
Q ss_pred EEEcCcHHHHHhhhcC----ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHH
Q 010523 159 RVTKGSPEQILNLLHN----KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAE 234 (508)
Q Consensus 159 ~~~kGa~e~il~~~~~----~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~ 234 (508)
.++||+|+.++++|.. +++..+.+.+.+++++.+|+|++++||+. .|++|+|+|+++++||||+++++
T Consensus 471 ~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R~ea~~ 542 (920)
T 1mhs_A 471 TCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPRHDTYK 542 (920)
T ss_dssp EEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCCHHHHH
T ss_pred EEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEeccccccHHH
Confidence 9999999999999974 33456678889999999999999999984 25689999999999999999999
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIV 312 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV 312 (508)
+|++|+++||+|+|+|||+..+|.++|+++||..+.+ ....+.|. +.+...++.+.+++..+|+|++|+||.++|
T Consensus 543 aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~K~~iV 619 (920)
T 1mhs_A 543 TVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQHKYNVV 619 (920)
T ss_dssp HHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTHHHHHH
T ss_pred HHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHHHHHHH
Confidence 9999999999999999999999999999999975432 12233443 233444566677888999999999999999
Q ss_pred HHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 313 KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGL 392 (508)
Q Consensus 313 ~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~ 392 (508)
+.||++|+.|+|+|||+||+|||+.|||||||++|++.|+++||+|+++++|++|++++++||++|+||++|+.|.+..+
T Consensus 620 ~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n 699 (920)
T 1mhs_A 620 EILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699 (920)
T ss_dssp HHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred HHH-HHHHHhhccccccHHHHHHHHHhhcccccccchhHHHHH
Q 010523 393 SST-EFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELL 434 (508)
Q Consensus 393 ~~~-i~~~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~ 434 (508)
... +++.+...+..+|+++.+++++.+++..|.+.++.++..
T Consensus 700 ~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~ 742 (920)
T 1mhs_A 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAP 742 (920)
T ss_dssp HHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSG
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcc
Confidence 543 333333334456788888888888887777777666543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-71 Score=635.77 Aligned_cols=440 Identities=23% Similarity=0.343 Sum_probs=362.4
Q ss_pred ccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeee
Q 010523 5 QHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNL 84 (508)
Q Consensus 5 ~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~ 84 (508)
.+++|.+++.+++++++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 318 ~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~ 397 (1028)
T 2zxe_A 318 LGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW 397 (1028)
T ss_dssp TTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEE
T ss_pred ccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eecc---cCC-----------CCh--HHHHHHHHHhccc------C---------CCChHHHHHHhhhcC----chhhhc
Q 010523 85 IEIF---AGG-----------VDA--DTVVLMAARASQV------E---------NLDVIDAAIVGMLAD----PKEARA 129 (508)
Q Consensus 85 i~~~---~~~-----------~~~--~~~l~~aa~~~~~------~---------~~~~~~~ai~~~~~~----~~~~~~ 129 (508)
+... ..+ .+. ..++..++.|+.. + ..+|.+.|++.++.. ....+.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~ 477 (1028)
T 2zxe_A 398 FDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRD 477 (1028)
T ss_dssp ETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHH
Confidence 5311 000 011 2566677776521 1 237888899987642 233456
Q ss_pred cceEEEEecCCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCee
Q 010523 130 DIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRS 196 (508)
Q Consensus 130 ~~~~~~~~pf~~~~kr~s~~~~~~---~g~~~~~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~ 196 (508)
.++.++.+||+|.+|||+++++.. +|+.+.++|||||.|+++|.. +++..+.+.+.+++++++|+||
T Consensus 478 ~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~Rv 557 (1028)
T 2zxe_A 478 RNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERV 557 (1028)
T ss_dssp HSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 788999999999999999998863 577889999999999999962 3445677888999999999999
Q ss_pred EEEEeeecCCCCc-----------cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhC
Q 010523 197 LAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 265 (508)
Q Consensus 197 l~vA~~~~~~~~~-----------~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lg 265 (508)
+++||+.+++.++ +..|.+++|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|++||
T Consensus 558 L~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lg 637 (1028)
T 2zxe_A 558 LGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637 (1028)
T ss_dssp EEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred EEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcC
Confidence 9999998865321 22368999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhcc--eEeecChhhHHHHHHHHhhcCCE
Q 010523 266 MGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKHLQARNHI 321 (508)
Q Consensus 266 i~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--v~a~~~P~~K~~iV~~l~~~g~~ 321 (508)
|..+... ..++.|.+.+. +....+++++.+.. +|+|++|+||..+|+.+|+.|+.
T Consensus 638 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~-~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~ 716 (1028)
T 2zxe_A 638 IISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD-LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAI 716 (1028)
T ss_dssp SSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT-CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh-CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCE
Confidence 9743211 01122221111 11112334455554 89999999999999999999999
Q ss_pred EEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 322 CGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV 400 (508)
Q Consensus 322 v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~ 400 (508)
|+|+|||.||+|||+.|||||||| +|++.++++||+|+.++++++|+++|++||++|+|+++++.|++..++..++..+
T Consensus 717 V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~ 796 (1028)
T 2zxe_A 717 VAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 796 (1028)
T ss_dssp EEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred EEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 6999999999999999999999999999999999999999999988776655544
Q ss_pred hhcc--ccccHHHHHHHHHhhcc-cccccchhHHHHHHHHhhcccccC
Q 010523 401 LELN--FLFTLDTVIAILQTAFT-SKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 401 ~~~~--~~~pl~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
...+ ..+|++++++++..+++ .+|.+.++.++...+.|.|+|+..
T Consensus 797 ~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~ 844 (1028)
T 2zxe_A 797 VFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNP 844 (1028)
T ss_dssp HHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCT
T ss_pred HHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCc
Confidence 4322 46799999999766666 568888888888888999999743
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-71 Score=632.33 Aligned_cols=441 Identities=21% Similarity=0.300 Sum_probs=363.7
Q ss_pred cccccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEee
Q 010523 4 IQHREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKN 83 (508)
Q Consensus 4 ~~~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~ 83 (508)
+.+++|.+++.+++++++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++
T Consensus 322 ~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~ 401 (1034)
T 3ixz_A 322 CIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHL 401 (1034)
T ss_pred HhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCC-----------C-----ChHHHHHHHHHhcccC---------------CCChHHHHHHhhhc----Cchhhh
Q 010523 84 LIEIFAGG-----------V-----DADTVVLMAARASQVE---------------NLDVIDAAIVGMLA----DPKEAR 128 (508)
Q Consensus 84 ~i~~~~~~-----------~-----~~~~~l~~aa~~~~~~---------------~~~~~~~ai~~~~~----~~~~~~ 128 (508)
++...... . ....++..++.|+... ..+|.+.|++.+.. +....+
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~ 481 (1034)
T 3ixz_A 402 WFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYR 481 (1034)
T ss_pred EECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHH
Confidence 75321100 0 0124556666664321 13688889887653 233446
Q ss_pred ccceEEEEecCCCCCceEEEEEEec---CCeEEEEEcCcHHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCe
Q 010523 129 ADIQEVHFLPFDPTGKRTALTYIDS---EGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLR 195 (508)
Q Consensus 129 ~~~~~~~~~pf~~~~kr~s~~~~~~---~g~~~~~~kGa~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr 195 (508)
..++.++.+||+|.+|+|++++... +++...++|||||.|+++|.. +++.++.+.+..++++.+|+|
T Consensus 482 ~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~R 561 (1034)
T 3ixz_A 482 ERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGER 561 (1034)
T ss_pred HhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcH
Confidence 7788999999999999998877653 367899999999999999962 345667889999999999999
Q ss_pred eEEEEeeecCCCCc-----------cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh
Q 010523 196 SLAVAYQEVPEGSK-----------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 264 (508)
Q Consensus 196 ~l~vA~~~~~~~~~-----------~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l 264 (508)
||++||+.+++.+. +..|++++|+|+++++||||++++++|++|+++||+|+|+|||+..+|.++|+++
T Consensus 562 vLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l 641 (1034)
T 3ixz_A 562 VLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV 641 (1034)
T ss_pred hheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 99999998865421 2347899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC----------------------CccccCCchhhhhhcCChhHHhhhc--ceEeecChhhHHHHHHHHhhcCC
Q 010523 265 GMGTNMYP----------------------SSALSGQDRDESIVALPVDELIEKA--DGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 265 gi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
|+..+... ..++.|.+.. .....++.+.++.. .+|+|++|+||.++|+.+|+.|+
T Consensus 642 gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~ 720 (1034)
T 3ixz_A 642 GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK-DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGA 720 (1034)
T ss_pred CCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh-hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCC
Confidence 99643210 0122222211 11111233334333 48999999999999999999999
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEec-CchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ 399 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~-~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~ 399 (508)
.|+|+|||.||+|||+.||+||||| +|++.+|++||+|+.++++++|+.+|++||++|+|+++++.|.+..++..++..
T Consensus 721 ~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 800 (1034)
T 3ixz_A 721 IVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPY 800 (1034)
T ss_pred EEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999999999999999999999999999998877665544
Q ss_pred Hhhcc--ccccHHHHHHHH-HhhcccccccchhHHHHHHHHhhcccccC
Q 010523 400 VLELN--FLFTLDTVIAIL-QTAFTSKKDFGKEERELLWAHAQRTLHGL 445 (508)
Q Consensus 400 ~~~~~--~~~pl~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 445 (508)
+...+ ..+|+.++|+|| ++..+.+|.+.++.+++.+++|+|+|+..
T Consensus 801 ~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~ 849 (1034)
T 3ixz_A 801 LIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNP 849 (1034)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCC
Confidence 33322 467999999995 55555889999999999999999999854
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-70 Score=625.03 Aligned_cols=435 Identities=25% Similarity=0.352 Sum_probs=356.6
Q ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecc--
Q 010523 11 TGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-- 88 (508)
Q Consensus 11 ~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~-- 88 (508)
..+..++++++++|||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++++...
T Consensus 295 ~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~ 374 (995)
T 3ar4_A 295 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVD 374 (995)
T ss_dssp HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCccc
Confidence 356688999999999999999999999999999999999999999999999999999999999999999998865210
Q ss_pred ------------cCCCC-------------------hHHHHHHHHHhcccC------------CCChHHHHHHhhhcCc-
Q 010523 89 ------------AGGVD-------------------ADTVVLMAARASQVE------------NLDVIDAAIVGMLADP- 124 (508)
Q Consensus 89 ------------~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~~~~ai~~~~~~~- 124 (508)
..++. ...++.+++.|+... ..+|.+.|++.++.+.
T Consensus 375 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g 454 (995)
T 3ar4_A 375 GDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMN 454 (995)
T ss_dssp TTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHC
T ss_pred CcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcC
Confidence 00000 112444556665321 1479999988654211
Q ss_pred ------h-------------hhhccceEEEEecCCCCCceEEEEEEecCC-----eEEEEEcCcHHHHHhhhcC------
Q 010523 125 ------K-------------EARADIQEVHFLPFDPTGKRTALTYIDSEG-----KMHRVTKGSPEQILNLLHN------ 174 (508)
Q Consensus 125 ------~-------------~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g-----~~~~~~kGa~e~il~~~~~------ 174 (508)
. ..+..++.++.+||+|.+|||+++++..+| +...++||+||.|+++|..
T Consensus 455 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~ 534 (995)
T 3ar4_A 455 VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTT 534 (995)
T ss_dssp TTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTE
T ss_pred CccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCC
Confidence 0 124568899999999999999999987666 5789999999999999962
Q ss_pred ----ChhHHHHHHHHHHHH--HHccCeeEEEEeeecCCCC----------ccCCCCCcEEEEEeccCCCCCcchHHHHHH
Q 010523 175 ----KSKIGRKVNAVINKF--AERGLRSLAVAYQEVPEGS----------KESSGSPWQFIGLIPLFDPPIHDSAETIRR 238 (508)
Q Consensus 175 ----~~~~~~~~~~~~~~~--a~~Glr~l~vA~~~~~~~~----------~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~ 238 (508)
+++.++.+.+.++++ +++|+||+++||++++..+ ++..|++++|+|+++++||+|++++++|+.
T Consensus 535 ~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~ 614 (995)
T 3ar4_A 535 RVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQL 614 (995)
T ss_dssp EEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHH
Confidence 234567788889999 9999999999999886432 123478999999999999999999999999
Q ss_pred HHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHh
Q 010523 239 ALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQ 316 (508)
Q Consensus 239 l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~ 316 (508)
|+++||+++|+|||+..+|.++|+++|+..... ...++.|++.+. +...+..+++++..+|+|++|+||.++|+.+|
T Consensus 615 l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~-l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~ 693 (995)
T 3ar4_A 615 CRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARVEPSHKSKIVEYLQ 693 (995)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHT-SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhh-CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHH
Confidence 999999999999999999999999999965321 123444433321 11223456677788999999999999999999
Q ss_pred hcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 317 ARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTE 396 (508)
Q Consensus 317 ~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i 396 (508)
++|+.|+|+|||+||+|||+.||+||||+++++.|+++||+++.+++|+++++++++||++|+||++++.|.+..++..+
T Consensus 694 ~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~ 773 (995)
T 3ar4_A 694 SYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 773 (995)
T ss_dssp TTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998766544
Q ss_pred HHHH-hhcc-ccccHHHHHHH-HHhhcccccccchhHHHHHHHHhhcccccCC
Q 010523 397 FIQV-LELN-FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQ 446 (508)
Q Consensus 397 ~~~~-~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 446 (508)
+..+ ..++ ...|+.++|++ +++++++.|.+.++.+++..+.|.|+|+...
T Consensus 774 ~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~ 826 (995)
T 3ar4_A 774 VCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPK 826 (995)
T ss_dssp HHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTT
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCc
Confidence 3322 2222 34789999999 6667778899999998888899999997543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-60 Score=523.66 Aligned_cols=365 Identities=24% Similarity=0.300 Sum_probs=314.8
Q ss_pred cHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeec
Q 010523 8 EYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI 87 (508)
Q Consensus 8 ~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~ 87 (508)
+|..++.+++++|+++|||||++++|+++..++.+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 366 ~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~--- 442 (736)
T 3rfu_A 366 ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV--- 442 (736)
T ss_dssp STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE---
T ss_pred hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE---
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHH
Q 010523 88 FAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQ 167 (508)
Q Consensus 88 ~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~ 167 (508)
..+.+.++++.+++..+..++ ||++.|++.++.+.. +......+|++..++.... ..+|+ .+.+|+++.
T Consensus 443 -~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~~-----~~~~~~~~f~~~~g~gv~~--~~~g~--~~~~G~~~~ 511 (736)
T 3rfu_A 443 -TDDFVEDNALALAAALEHQSE-HPLANAIVHAAKEKG-----LSLGSVEAFEAPTGKGVVG--QVDGH--HVAIGNARL 511 (736)
T ss_dssp -ESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTTC-----CCCCCCSCCCCCTTTEEEE--CSSSS--CEEEESHHH
T ss_pred -ecCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHhcC-----CCccCcccccccCCceEEE--EECCE--EEEEcCHHH
Confidence 346778889888888877655 499999998875322 2222344677766654322 23443 466799998
Q ss_pred HHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEE
Q 010523 168 ILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVK 247 (508)
Q Consensus 168 il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~ 247 (508)
+.+..... ..+.+..++++.+|+|++++|++. +++|+++++|++|++++++|++|+++|++++
T Consensus 512 ~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~ 574 (736)
T 3rfu_A 512 MQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVEDPIKSSTPETILELQQSGIEIV 574 (736)
T ss_dssp HHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECCBCSSHHHHHHHHHHHTCEEE
T ss_pred HHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEeeccchhhHHHHHHHHHHCCCeEE
Confidence 87654332 245567889999999999999965 8999999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcC
Q 010523 248 MITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGN 327 (508)
Q Consensus 248 mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGD 327 (508)
|+|||+..+|..+++++|+. .++++++|++|.++|+.+|++|+.|+|+||
T Consensus 575 mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGD 624 (736)
T 3rfu_A 575 MLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMPEDKSRIVSELKDKGLIVAMAGD 624 (736)
T ss_dssp EECSSCHHHHHHHHHHHTCC------------------------------CEECSCCHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred EECCCCHHHHHHHHHHcCCC------------------------------EEEEecCHHHHHHHHHHHHhcCCEEEEEEC
Confidence 99999999999999999995 379999999999999999999999999999
Q ss_pred CCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-
Q 010523 328 GVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL- 406 (508)
Q Consensus 328 G~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~- 406 (508)
|.||+|||+.|||||||+++++.++++||+|+.++++++|++++++||++++||++|+.|++.++...+.+.++.++.+
T Consensus 625 G~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~ 704 (736)
T 3rfu_A 625 GVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLT 704 (736)
T ss_dssp SSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTS
T ss_pred ChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988776543
Q ss_pred -ccHHHHHHHHHhhcccccccchhHHHH
Q 010523 407 -FTLDTVIAILQTAFTSKKDFGKEEREL 433 (508)
Q Consensus 407 -~pl~~~~~l~~~~~~~~~~~~~~~~~~ 433 (508)
+.++++.--..|.+++..+..++.|..
T Consensus 705 G~~l~P~~aa~~m~~Ssv~Vv~nslrl~ 732 (736)
T 3rfu_A 705 GLLLSPMIAAAAMALSSVSVIINALRLK 732 (736)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cchhhHHHHHHHHHhhHHHHHHHHHHhc
Confidence 224555555777788887776665543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-57 Score=505.89 Aligned_cols=366 Identities=23% Similarity=0.289 Sum_probs=305.1
Q ss_pred cccc-cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 2 FAIQ-HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 2 ~~~~-~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
|++. +.+|..++..++++++++|||+|++++|+++..++.+++|+|+++|+++++|+||++|+||||||||||+|+|+|
T Consensus 343 ~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v 422 (723)
T 3j09_A 343 WYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422 (723)
T ss_dssp SCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEE
T ss_pred HHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEE
Confidence 4433 567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
.+++. .+.+.++++.+++.++..++ ||++.|++.++.+........+..+..|.. .. . ...+
T Consensus 423 ~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~~~~~~~~~~~~~~g~-----g~-~-------~~~~ 484 (723)
T 3j09_A 423 TDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGE-----GV-V-------ADGI 484 (723)
T ss_dssp EEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTT-----EE-E-------ETTE
T ss_pred EEEEe----CCCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcCCCcCCccceEEecCC-----ce-E-------EEEE
Confidence 98754 24678889998888877755 499999998764322111111222222211 10 0 0236
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
.+|+++.+.+... ...+.+....++++.+|+|+++++++. +++|+++++|++|++++++|++|+
T Consensus 485 ~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~~~~~~~i~~l~ 548 (723)
T 3j09_A 485 LVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELK 548 (723)
T ss_dssp EEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSCTTHHHHHHHHH
T ss_pred EECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcchhHHHHHHHHH
Confidence 6799887755332 234567778899999999999999864 999999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
++|++++|+|||+..+|..+++++|+. .++++++|++|.++|+.++++ +
T Consensus 549 ~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~~v~~l~~~-~ 597 (723)
T 3j09_A 549 RMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSEEVKKLQAK-E 597 (723)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHHHHHHHTTT-C
T ss_pred HCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHHHHHHHHhcC-C
Confidence 999999999999999999999999994 479999999999999999998 8
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV 400 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~ 400 (508)
.|+|+|||.||+|||+.|||||||+++++.++++||+|+.+++++++++++++||++++|+++|+.|++..+...+.+.+
T Consensus 598 ~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 677 (723)
T 3j09_A 598 VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAA 677 (723)
T ss_dssp CEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888887
Q ss_pred hhcccc--ccHHHHHHHHHhhcccccccchhHHH
Q 010523 401 LELNFL--FTLDTVIAILQTAFTSKKDFGKEERE 432 (508)
Q Consensus 401 ~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~ 432 (508)
+.++.+ +.+++..--..|.+++..+..++.|.
T Consensus 678 ~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl 711 (723)
T 3j09_A 678 GLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLL 711 (723)
T ss_dssp HTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred HhhhhccccccCHHHHHHHHhccHHHHHHHHHHh
Confidence 765532 23444444456666776666555443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-57 Score=499.06 Aligned_cols=366 Identities=23% Similarity=0.289 Sum_probs=304.2
Q ss_pred cccc-cccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEE
Q 010523 2 FAIQ-HREYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTV 80 (508)
Q Consensus 2 ~~~~-~~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v 80 (508)
|++. +.+|..++..++++++++|||+||+++|+++..++.+++|+|+++|+++++|+||++|+||||||||||+|+|+|
T Consensus 265 ~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v 344 (645)
T 3j08_A 265 WYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 344 (645)
T ss_dssp SSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEE
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEE
Confidence 4433 567888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEE
Q 010523 81 DKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRV 160 (508)
Q Consensus 81 ~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~ 160 (508)
.+++. .+.+.++++.+++.++..++ ||++.|++.++.+........+.++..|.. .. . ...+
T Consensus 345 ~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g~~~~~~~~~~~~~g~-----g~-~-------~~~v 406 (645)
T 3j08_A 345 TDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGE-----GV-V-------ADGI 406 (645)
T ss_dssp EEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTT-----EE-E-------ETTE
T ss_pred EEEEe----CCCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcCCCcCCccceEEecCC-----ce-E-------EEEE
Confidence 98754 25678889999888887755 499999998765322111111122222211 10 0 0236
Q ss_pred EcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHH
Q 010523 161 TKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRAL 240 (508)
Q Consensus 161 ~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~ 240 (508)
.+|+++.+.+... ...+.+....++++.+|+|+++++++. +++|+++++|++|++++++|++|+
T Consensus 407 ~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~~~~~~~i~~L~ 470 (645)
T 3j08_A 407 LVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELK 470 (645)
T ss_dssp EEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCTTTHHHHHHHHH
T ss_pred EECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCchhHHHHHHHHHH
Confidence 6799887755322 234567778889999999999999864 999999999999999999999999
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCC
Q 010523 241 SLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNH 320 (508)
Q Consensus 241 ~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~ 320 (508)
++|++++|+|||+..+|..+++++|+. .+|++++|++|.++|+.++++ +
T Consensus 471 ~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~~~v~~l~~~-~ 519 (645)
T 3j08_A 471 RMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKSEEVKKLQAK-E 519 (645)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHHHHHHHHTTT-C
T ss_pred HCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHHHHHHHHhhC-C
Confidence 999999999999999999999999994 479999999999999999998 8
Q ss_pred EEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010523 321 ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV 400 (508)
Q Consensus 321 ~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~~~~~~~~~~i~~~~ 400 (508)
.|+|+|||.||+|||+.||+||||+++++.++++||+|+.+++++++++++++||++++|+++|+.|++..+...+.+.+
T Consensus 520 ~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~ 599 (645)
T 3j08_A 520 VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAA 599 (645)
T ss_dssp CEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhcccc--ccHHHHHHHHHhhcccccccchhHHH
Q 010523 401 LELNFL--FTLDTVIAILQTAFTSKKDFGKEERE 432 (508)
Q Consensus 401 ~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~ 432 (508)
+.++.+ +.+++..--..|.+++..+..++.|.
T Consensus 600 ~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl 633 (645)
T 3j08_A 600 GLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLL 633 (645)
T ss_dssp TTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSC
T ss_pred HhHhhhcccccCHHHHHHHHhcchHHHHHhhHHh
Confidence 664432 23444444456666666666555433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-38 Score=308.17 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=205.6
Q ss_pred HHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHH
Q 010523 38 IGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAI 117 (508)
Q Consensus 38 ~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai 117 (508)
.++.+++|+||++|+++++|.|+++++||||||||||+|+|.|.++. +.++++.+++..+..++| |++.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~h-p~a~ai 74 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSSH-PIAKAI 74 (263)
Confidence 35788999999999999999999999999999999999999998742 456777777777766554 999999
Q ss_pred HhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeE
Q 010523 118 VGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSL 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l 197 (508)
..++.+........+.+..++..+... .+ ++ ..+..|+++ .|.+ +
T Consensus 75 ~~~~~~~g~~~~~~~~~~~~~G~g~~~----~~---~~--~~~~~G~~~-------------------------~~~~-~ 119 (263)
T 2yj3_A 75 VKYAKEQGVKILEVKDFKEISGIGVRG----KI---SD--KIIEVKKAE-------------------------NNND-I 119 (263)
Confidence 887643211100111111111100000 00 00 011112211 3444 5
Q ss_pred EEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc
Q 010523 198 AVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS 277 (508)
Q Consensus 198 ~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~ 277 (508)
.++++. .+.|.+.+.|+++|++.++|+.|++.|++++|+|||+...+..+++.+|+.
T Consensus 120 ~~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------- 176 (263)
T 2yj3_A 120 AVYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------- 176 (263)
Confidence 666655 789999999999999999999999999999999999999999999999984
Q ss_pred CCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch
Q 010523 278 GQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 357 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi 357 (508)
.+|+.+.|+.|..+++.++..+..|+|||||.||+++++.||+|++++++++.+.+.||+
T Consensus 177 --------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~ 236 (263)
T 2yj3_A 177 --------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADI 236 (263)
Confidence 257778899999999999999999999999999999999999999999888889999999
Q ss_pred hccCCChhHHHHHHHHHHHHHHHHHHH
Q 010523 358 VLTEPGLNVIITAVLISRAIFQRMRNY 384 (508)
Q Consensus 358 vl~~~~l~~i~~~i~~~R~~~~~i~~~ 384 (508)
++..+++..+..++.+||+++++|++|
T Consensus 237 v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 237 ILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=263.70 Aligned_cols=280 Identities=27% Similarity=0.399 Sum_probs=211.1
Q ss_pred HHHHHHHhCCCeecCchHHHHhccccEEEcccccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHH
Q 010523 38 IGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAI 117 (508)
Q Consensus 38 ~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai 117 (508)
-|+++++|+|+++|+++++|+++++++||||||||||.+.+.+.+++. . .+ +.++++.+++..+..++ +|++.++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~-hp~~~a~ 82 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSE-HPIAEAI 82 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCC-SHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCC-CHHHHHH
Confidence 367899999999999999999999999999999999999999987543 2 24 77888888888877655 5999999
Q ss_pred HhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeE
Q 010523 118 VGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSL 197 (508)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l 197 (508)
..++..........+.+..++-.+ +.. ..+.+|.++.+.+... ...+.+....+.+..+|.+++
T Consensus 83 ~~~~~~~g~~~~~~~~~~~~~G~~--------~~~-----~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~i 146 (287)
T 3a1c_A 83 VKKALEHGIELGEPEKVEVIAGEG--------VVA-----DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAV 146 (287)
T ss_dssp HHHHHHTTCCCCCCSCEEEETTTE--------EEE-----TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCccccccceeecCCC--------eEE-----EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhCCCeEE
Confidence 887642211101111111111100 000 1244577665433221 111234556777888999999
Q ss_pred EEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc
Q 010523 198 AVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS 277 (508)
Q Consensus 198 ~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~ 277 (508)
++++.. .+.+.+...++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 147 ~~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~---------- 203 (287)
T 3a1c_A 147 IVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------- 203 (287)
T ss_dssp EEEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------
T ss_pred EEEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc----------
Confidence 999875 899999999999999999999999999999999999999999999999984
Q ss_pred CCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch
Q 010523 278 GQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 357 (508)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi 357 (508)
..|..+.|..|...++.++.. ..|+|+||+.||++|.+.|+++++++++.+..+..+|+
T Consensus 204 --------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~ 262 (287)
T 3a1c_A 204 --------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDI 262 (287)
T ss_dssp --------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSE
T ss_pred --------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCE
Confidence 256777799999999999888 89999999999999999999999998766666778999
Q ss_pred hccCCChhHHHHHHHHHHHHHHHHH
Q 010523 358 VLTEPGLNVIITAVLISRAIFQRMR 382 (508)
Q Consensus 358 vl~~~~l~~i~~~i~~~R~~~~~i~ 382 (508)
++.++++..+..++..+|+++++||
T Consensus 263 v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 263 VLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp EESSSCTHHHHHHHHTTC-------
T ss_pred EEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9988899999999999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-29 Score=243.45 Aligned_cols=276 Identities=29% Similarity=0.381 Sum_probs=206.8
Q ss_pred ecCchHHHHhccccEEEcccccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhc
Q 010523 50 TKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARA 129 (508)
Q Consensus 50 vk~~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~ 129 (508)
+|+++++|.|++++.|||||+||||.|+++|.++.. +. + +.++++.+++.++....+ ++..++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s~~-~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARSEH-PIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTCCS-HHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccCCC-HHHHHHHHHHHhcCCCCC
Confidence 589999999999999999999999999999988542 22 3 788888888877766554 888888776643221112
Q ss_pred cceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCc
Q 010523 130 DIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 209 (508)
Q Consensus 130 ~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~ 209 (508)
....+..++..+ .... .++ ..+..|.++.+........ ....++...+.+.+.+++..
T Consensus 76 ~~~~~~~~~g~~----~~~~---~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGKG----VEGI---VNG--RRYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTTE----EEEE---ETT--EEEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCCE----EEEE---ECC--EEEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 222333333211 1111 133 2334577777655433221 23456778899999888765
Q ss_pred cCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 010523 210 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 289 (508)
Q Consensus 210 ~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
.++|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 899999999999999999999999999999999999999999999999984
Q ss_pred hhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHH
Q 010523 290 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 290 ~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
..|..+.|.+|...++.+.+.. .|+|+||+.||++|++.|++|++|+++++..+..||+++..++++++..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 3578888999999999988775 6799999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 010523 370 AVLISRAIFQRMRNYMVRGID 390 (508)
Q Consensus 370 ~i~~~R~~~~~i~~~~~~~~~ 390 (508)
++..+|+++.++++|+.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-24 Score=210.32 Aligned_cols=143 Identities=11% Similarity=0.021 Sum_probs=114.1
Q ss_pred cCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC---CC-ccccCCchhhhhhcCChhHHhhhcce
Q 010523 224 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY---PS-SALSGQDRDESIVALPVDELIEKADG 299 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (508)
..+++||+++++++.|+++|++|+|+|||...++.++++++|+..... .. ..+.++........ .....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~-------~~i~~ 210 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------ELIHV 210 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECS-------SCCCT
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccc-------cccch
Confidence 457999999999999999999999999999999999999999864321 00 00111110000000 01235
Q ss_pred EeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhh---cCCeeEEec-------CchHHHHhhcchhccCCChhHHHH
Q 010523 300 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK---KADIGIAVA-------DATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 300 ~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~---~AdvGIa~~-------~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
+++..|.+|...+..+++.++.|+|+|||+||+||++ .||+||+|| ++++.+++++||||+++++..++.
T Consensus 211 ~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~ 290 (297)
T 4fe3_A 211 FNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVN 290 (297)
T ss_dssp TCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHH
T ss_pred hhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHH
Confidence 7788899999999999999999999999999999954 999999999 789999999999999999999998
Q ss_pred HHHH
Q 010523 370 AVLI 373 (508)
Q Consensus 370 ~i~~ 373 (508)
+|..
T Consensus 291 ~il~ 294 (297)
T 4fe3_A 291 SILQ 294 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8863
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=165.05 Aligned_cols=139 Identities=23% Similarity=0.341 Sum_probs=117.8
Q ss_pred cCCCChHHHHHHHHHhc--ccCCCChHHHHHHhhhcCch--hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCc
Q 010523 89 AGGVDADTVVLMAARAS--QVENLDVIDAAIVGMLADPK--EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGS 164 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~--~~~~~~~~~~ai~~~~~~~~--~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa 164 (508)
..|.+.++++.+|++++ +....||+|.|++.++.... ..+..++.++++||+|.+|||+++++..+|+..+++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 35778899999999998 55677999999999875321 235678999999999999999999987788889999999
Q ss_pred HHHHHhhhcC----------ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC---ccCCCCCcEEEEEeccCCC
Q 010523 165 PEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS---KESSGSPWQFIGLIPLFDP 227 (508)
Q Consensus 165 ~e~il~~~~~----------~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~---~~~~e~~l~~lG~i~l~D~ 227 (508)
||.|+++|.. +++.++.+.+.+++|+.+|+|||+|||+.++..+ ....|++|+|+|+++|-|.
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999972 5566788999999999999999999999987543 2346899999999999885
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=99.48 E-value=5e-15 Score=105.64 Aligned_cols=51 Identities=71% Similarity=1.076 Sum_probs=49.0
Q ss_pred cccccchhHHHHHhhhhHHhhhhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 458 SYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 458 ~~~~~~~~~~~~~rr~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
++.++++++|+++||+|++|||++|||+||+||++|+||+|++.++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 467889999999999999999999999999999999999999999999997
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.5e-14 Score=131.48 Aligned_cols=124 Identities=22% Similarity=0.396 Sum_probs=105.9
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
+|+.|++.|+++.++||++...+..+++.+|+.. +|..+ ..|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 8999999999999999999999999999999842 23333 567677766
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~----l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
+.++ ...|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|.+++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6554 467999999999999999999999999999999999999998874 56678888889999999999988
Q ss_pred HHHH
Q 010523 387 RGID 390 (508)
Q Consensus 387 ~~~~ 390 (508)
|.+.
T Consensus 182 ~~~~ 185 (189)
T 3mn1_A 182 EGHH 185 (189)
T ss_dssp TTC-
T ss_pred cccc
Confidence 8754
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-14 Score=88.07 Aligned_cols=30 Identities=73% Similarity=1.211 Sum_probs=29.4
Q ss_pred hhhhhcchhhhhhhhccCCChhhhhccccC
Q 010523 479 RELHTLKGHVESLIRLKGLDIDAIQQSYSV 508 (508)
Q Consensus 479 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 508 (508)
||+|||+||+||++||||+|+++||+||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 799999999999999999999999999998
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.2e-13 Score=135.39 Aligned_cols=155 Identities=14% Similarity=0.149 Sum_probs=109.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.+.++.|++.|+++.|+||+....+..+.+.+|+..-......+.+....... .....+....|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~---------~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQV---------LGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEE---------ESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeee---------cccccChhhhHH
Confidence 68999999999999999999999999999999999999984211000000000000000 000011122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMV 386 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i~~~~~ 386 (508)
....+.+.++-....|+|+|||.||++|++.|++|++| ++.+..++.||.++..+++.+++.++.......+++++|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 33444455544557899999999999999999999999 88899999999999999999999999988877888888888
Q ss_pred HHHHH
Q 010523 387 RGIDG 391 (508)
Q Consensus 387 ~~~~~ 391 (508)
|++..
T Consensus 328 ~~~~~ 332 (335)
T 3n28_A 328 EGHHH 332 (335)
T ss_dssp -----
T ss_pred ccccc
Confidence 87643
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-12 Score=121.17 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=100.3
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec--ChhhHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV--FPEHKYEIV 312 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~--~P~~K~~iV 312 (508)
.|+.|++.|+++.++||+....+..+.+.+|+.. +|..+ .|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 3999999999999999999999999999999852 23333 344445566
Q ss_pred HHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH----HHHHHHHHHHHHHHHHHHHHH
Q 010523 313 KHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVLISRAIFQRMRNYMVR 387 (508)
Q Consensus 313 ~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~----i~~~i~~~R~~~~~i~~~~~~ 387 (508)
+.++-....|+|+||+.||.+|++.|+++++++++.+.++..||+++.+++..+ +.+.+...|..++++.++++|
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 666555678999999999999999999999999998999999999999888554 555666677788888777665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=116.12 Aligned_cols=130 Identities=20% Similarity=0.173 Sum_probs=103.2
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhH
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 308 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 308 (508)
.+++.++|+.|++.|++++++||++...+..+.+.+|+.. .|... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecCC--CCc
Confidence 3466799999999999999999999999999999999852 22222 445
Q ss_pred HHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHH----HHHHHHHHHHHH
Q 010523 309 YEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII----TAVLISRAIFQR 380 (508)
Q Consensus 309 ~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~----~~i~~~R~~~~~ 380 (508)
...++.+.++ | ..|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++..+++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6655544332 3 6799999999999999999999999988889999999999988766666 334455667888
Q ss_pred HHHHHHHHHH
Q 010523 381 MRNYMVRGID 390 (508)
Q Consensus 381 i~~~~~~~~~ 390 (508)
++.++.|+..
T Consensus 165 ~~~~~~~~~~ 174 (180)
T 1k1e_A 165 FDTAQGFLKS 174 (180)
T ss_dssp HHCHHHHHHH
T ss_pred hhhccchhhh
Confidence 8877777653
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=7.8e-12 Score=111.38 Aligned_cols=140 Identities=21% Similarity=0.280 Sum_probs=95.9
Q ss_pred cccccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCc-hhhhccce--EEEEecCCCCCce
Q 010523 69 KTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEARADIQ--EVHFLPFDPTGKR 145 (508)
Q Consensus 69 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~~~~~pf~~~~kr 145 (508)
..||+|-|+++|..+.. ..+.+.++++.+++.++..+.| |+++||+.++.+. .......+ ...+.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~SeH-Pla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCCS-HHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCCC-HHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999988542 3578899999999999877655 9999999887532 11111110 2345789888886
Q ss_pred EEEEEEecCCeEEEEEcCcHHHHHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEecc
Q 010523 146 TALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 224 (508)
Q Consensus 146 ~s~~~~~~~g~~~~~~kGa~e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l 224 (508)
..+.+ +| ..+.+|+++.|..++.. ..+....+.+.+++++.+|.++++||.+. +++|+|++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 66 56889998776665531 11233357778889999999999999865 89999999
Q ss_pred CCCCCc
Q 010523 225 FDPPIH 230 (508)
Q Consensus 225 ~D~~r~ 230 (508)
.|++|+
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.1e-12 Score=120.13 Aligned_cols=102 Identities=21% Similarity=0.343 Sum_probs=85.0
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
.|+.|++.|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHHH
Confidence 4999999999999999999999999999999852 23333 445555555
Q ss_pred Hhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHH
Q 010523 315 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 315 l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~ 368 (508)
+.+ ....|+|+||+.||.+|++.|+++++|+++.+.+++.||+|+..++-.+++
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHH
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHH
Confidence 443 346799999999999999999999999999999999999999988766643
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-12 Score=114.24 Aligned_cols=137 Identities=19% Similarity=0.157 Sum_probs=99.9
Q ss_pred ccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHH--HhCCCCC
Q 010523 192 RGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR--RLGMGTN 269 (508)
Q Consensus 192 ~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~--~lgi~~~ 269 (508)
++.+.+++-....-....-....+-..++.+.+.|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 456666666554321111112222356777777766 3899999999999999999 67778888 45552
Q ss_pred CCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEec
Q 010523 270 MYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVA 345 (508)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~ 345 (508)
+|. .+++|...++.+.++ ...|+|+||+.||.+|++.|+++++|+
T Consensus 77 -----------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 77 -----------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp -----------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred -----------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 122 135677777766554 457999999999999999999999999
Q ss_pred CchHHHHhhcchhccCCChhHHHH
Q 010523 346 DATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 346 ~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
++.+.+++.||+|+..++-.+++.
T Consensus 126 na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 126 DACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp TCCHHHHTTCSEECSSCTTTTHHH
T ss_pred ChhHHHHHhCCEEeCCCCCccHHH
Confidence 999999999999999887777443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-11 Score=115.68 Aligned_cols=148 Identities=20% Similarity=0.114 Sum_probs=105.1
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CCc-cc--cCCch-hhh-h------------
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSS-AL--SGQDR-DES-I------------ 285 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~~-~~--~~~~~-~~~-~------------ 285 (508)
...+.+++.++|++|++.|++++++||+....+..+++.+|+....+ ++. +. .++.. ... +
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999853110 011 11 11111 000 0
Q ss_pred -----------------------hcCChhHHhh--hcc-----eEeecCh--hhHHHHHHHHhhc----CCEEEEEcCCC
Q 010523 286 -----------------------VALPVDELIE--KAD-----GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 329 (508)
Q Consensus 286 -----------------------~~~~~~~~~~--~~~-----v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ 329 (508)
......++.+ ... .+.++.| .+|...++.+.+. ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 0000001110 011 1233445 5898888887654 34699999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 330 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 330 ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
||.+|++.|++|++|+++.+.+++.||+++.+++-+++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999998876
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.4e-11 Score=109.90 Aligned_cols=105 Identities=27% Similarity=0.333 Sum_probs=88.2
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
+|+.|++.|+++.++||+....+..+++.+|+. ++... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999983 13332 556666665
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+.+. ...|+|+||+.||.+|++.|+++++++++.+.++..||+++.+++..+++..+.
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 5443 467999999999999999999999999988899999999999988777665543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=114.50 Aligned_cols=100 Identities=24% Similarity=0.318 Sum_probs=86.0
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
+|+.|++.|+++.++||++...+..+++.+|+.. +|..+ ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999942 34444 566777766
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~ 366 (508)
+.++ ...|+|+||+.||.+|++.|+++++++++.+.++..||+|+.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 6554 578999999999999999999999999988889999999999886554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=102.88 Aligned_cols=106 Identities=26% Similarity=0.288 Sum_probs=85.7
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
+++.|++.|+++.++||++...+..+.+.+|+.. .|... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------------eeccc--CChHHHHHH
Confidence 7999999999999999999999999999999852 23322 334444444
Q ss_pred H----hhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH-HHHHHH
Q 010523 315 L----QARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAVL 372 (508)
Q Consensus 315 l----~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~-i~~~i~ 372 (508)
+ .-....|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+ +.++++
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 3 333467999999999999999999999999999999999999999988666 444443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.04 E-value=3e-10 Score=117.88 Aligned_cols=136 Identities=20% Similarity=0.243 Sum_probs=105.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee----
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG---- 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~---- 302 (508)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.........+.+. .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg------------------~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG------------------TLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT------------------EEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC------------------EEEeeEccC
Confidence 78999999999999999999999999999999999999984211000000000 00111
Q ss_pred -cChhhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHH
Q 010523 303 -VFPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAI 377 (508)
Q Consensus 303 -~~P~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~ 377 (508)
..+..|..+++.+.++ ...|+|+||+.||.+|++.|++|+++ ++.+..++.||+++..+++.+++.++.++|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 2256677776665443 35799999999999999999999999 77788899999999999999999999888876
Q ss_pred HHHH
Q 010523 378 FQRM 381 (508)
Q Consensus 378 ~~~i 381 (508)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.6e-10 Score=105.33 Aligned_cols=132 Identities=20% Similarity=0.252 Sum_probs=95.4
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee--c
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--V 303 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~--~ 303 (508)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... .. ++...+. .. ...+.. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~~--~~-----------~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-SN-TLIVEND--AL-----------NGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-EE-EEEEETT--EE-----------EEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-cc-eeEEeCC--EE-----------EeeeccCCC
Confidence 357899999999999999999999999999999999999985311 00 0000000 00 000011 1
Q ss_pred ChhhHHHHHHHHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 304 FPEHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 304 ~P~~K~~iV~~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
....|..+++.+.+ ....|+++||+.||.+|++.|++++++ ++.+..++.||+++.+++|..+..++.+
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 23456665555443 346799999999999999999999999 7888889999999999999999887764
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.00 E-value=7.7e-10 Score=107.89 Aligned_cols=72 Identities=24% Similarity=0.313 Sum_probs=60.9
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
.+.|. .|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+.++++||+|+.+++-+++.++|+.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 34444 677776666543 3469999999999999999999999999999999999999999999999988873
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=107.20 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=59.0
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
..|...++.+.+. ...|+++||+.||.+|++.|++|+||+++.+.+++.||+|+.+++-+++.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 3577777666554 346999999999999999999999999999999999999999999999999887
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.92 E-value=6.6e-10 Score=111.75 Aligned_cols=143 Identities=13% Similarity=0.156 Sum_probs=96.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--h------------hhhhhcCChhH
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--R------------DESIVALPVDE 292 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~--~------------~~~~~~~~~~~ 292 (508)
++++++.++++.|++ |+.+.++||+....+......+++....... ...-+. . +........++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGT-EVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEE-BCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhccc-ccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468899999999999 9999999999977777777777763221100 000000 0 00000000000
Q ss_pred H--hhh----c--ceEe----ecChhhHHHHHHHHhhcC--CEEEEEcCCCCChhhhhcC----CeeEEecCchHHHHhh
Q 010523 293 L--IEK----A--DGFA----GVFPEHKYEIVKHLQARN--HICGMIGNGVNDAPALKKA----DIGIAVADATDAARSA 354 (508)
Q Consensus 293 ~--~~~----~--~v~a----~~~P~~K~~iV~~l~~~g--~~v~~vGDG~ND~~al~~A----dvGIa~~~~~~~a~~a 354 (508)
+ +.. . ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| ++||+| ++.+.+++.
T Consensus 181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~ 259 (332)
T 1y8a_A 181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKH 259 (332)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTT
T ss_pred HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhh
Confidence 0 000 0 0111 112567888888665543 5599999999999999999 999999 999999999
Q ss_pred cchhccCCChhHHHHHHH
Q 010523 355 ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 355 ADivl~~~~l~~i~~~i~ 372 (508)
||+|+.+++.+++..+|+
T Consensus 260 Ad~v~~~~~~dGV~~~l~ 277 (332)
T 1y8a_A 260 ADVVIISPTAMSEAKVIE 277 (332)
T ss_dssp CSEEEECSSTHHHHHHHH
T ss_pred CcEEecCCCCCHHHHHHH
Confidence 999999999999887775
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-09 Score=105.48 Aligned_cols=66 Identities=23% Similarity=0.243 Sum_probs=58.8
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.+. ...|+++||+.||.+|++.|++||||+++.+.+++.||+|+.+++-++|.++|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588777776554 345999999999999999999999999999999999999999999999998886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-09 Score=105.46 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=47.7
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.+. ...|+++||+.||.+|++.|++|+||+++.+..+++||+|+.+++-++|.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777766554 346999999999999999999999999999999999999999999999998875
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.6e-09 Score=106.70 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=94.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 305 (508)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+...........+..... .+. .-..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 478999999999999999999999999999999999999853110000000000000 000 01134
Q ss_pred hhHHHHHHHHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
..|..+++.+.+ ....|+|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..+..++.
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 556665554433 345799999999999999999999999 577778889999999899998876653
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.4e-09 Score=98.77 Aligned_cols=128 Identities=22% Similarity=0.312 Sum_probs=88.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee-cCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~-~~P 305 (508)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+... +.......+. ... ..+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG---KLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT---EEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC---EEc----------CCcccCccCC
Confidence 4567999999999999999999999998888888888887421 1000000000 000 000001 224
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
..|...+..+.++ ...|+++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 5676665554432 346999999999999999999999998 55667888999998777877654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=3.7e-09 Score=97.27 Aligned_cols=106 Identities=25% Similarity=0.324 Sum_probs=84.5
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHHH
Q 010523 235 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 314 (508)
Q Consensus 235 ~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 314 (508)
+|+.|++.|+++.++||+....+..+.+.+|+.. +|... ..|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHHH
Confidence 8999999999999999999999999999999852 22222 234444444
Q ss_pred Hhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHH-HHHH
Q 010523 315 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII-TAVL 372 (508)
Q Consensus 315 l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~-~~i~ 372 (508)
+.++ ...|+|+||+.||.++++.|+++++++++.+.++..||+++.+++..+++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4332 36799999999999999999999999887777788899999988777766 5554
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.85 E-value=9.4e-10 Score=100.77 Aligned_cols=119 Identities=20% Similarity=0.258 Sum_probs=89.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++++++.+.++.|++.|+++.++|++....+..+ +.+|+..- .......+.. .......|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----------------~~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGK-----------------FQGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTE-----------------EEEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCc-----------------eECCcCCcc
Confidence 6899999999999999999999999988877777 77776321 0000000000 001345667
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+ ....|+++||+.||.+|++.|+++++|+++.+ .||+++. ++..+.+.++
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 899998888 56789999999999999999999999997765 8899985 4777766654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.6e-09 Score=92.78 Aligned_cols=110 Identities=21% Similarity=0.275 Sum_probs=87.3
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC--hh
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PE 306 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~--P~ 306 (508)
.+++.++++.|++.|+++.++||.....+..+.+.+|+.. .|.... |+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~~ 87 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKLE 87 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCHH
Confidence 4678899999999999999999999999999999999842 122222 22
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~ 368 (508)
--..+++.++-....|+|+||+.||.++.+.|++++++.++.+..+..||+++.+.+..+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 22234444444456799999999999999999999999887778888999999988887777
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.83 E-value=9.7e-09 Score=98.97 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=56.8
Q ss_pred hHHHHHHHHhh----cCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~----~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|..-++.+.+ ....|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-+++.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 45555655544 2456999999999999999999999999999999999999999999999998886
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=9.1e-09 Score=100.87 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch--hccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi--vl~~~~l~~i~~~i~ 372 (508)
..|...++.+.+. ...|+++||+.||.+|++.|++||||+++.+.+|++||+ |+.+++-++|.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3577777776553 246999999999999999999999999999999999995 677888999998876
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=5e-09 Score=101.53 Aligned_cols=67 Identities=24% Similarity=0.272 Sum_probs=58.4
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
.|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-+++.++|+.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 477666665443 4579999999999999999999999999999999999999999999999988863
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.6e-08 Score=96.03 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=100.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCC--CC-cccc-CCc--------hhh-------hhhc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PS-SALS-GQD--------RDE-------SIVA 287 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~--~~-~~~~-~~~--------~~~-------~~~~ 287 (508)
.+.+.+.++++++++.|++++++||.....+..+.+.+|+..... +. .++. ++. ..+ ....
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 466888999999999999999999999999999999999853111 00 0010 100 000 0000
Q ss_pred C--------------------C---hhHHhhh----cceE-----eecCh--hhHHHHHHHHhhc----CCEEEEEcCCC
Q 010523 288 L--------------------P---VDELIEK----ADGF-----AGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 329 (508)
Q Consensus 288 ~--------------------~---~~~~~~~----~~v~-----a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ 329 (508)
. . ..++.++ ..+. ..+.| ..|...++.+.++ ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0 0 0111111 1111 23333 3577777766543 35699999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 330 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 330 ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
||.+|++.|+++++|+++.+..++.||+++.+++-+++.++++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999988888899999999888889988876
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=5.4e-08 Score=94.08 Aligned_cols=195 Identities=15% Similarity=0.152 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHccCeeEEEEeeecCCCC-ccCCCCCcEEEEE-----------eccCCC-CCcchHHHHHHHHhCC
Q 010523 177 KIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-KESSGSPWQFIGL-----------IPLFDP-PIHDSAETIRRALSLG 243 (508)
Q Consensus 177 ~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~-~~~~e~~l~~lG~-----------i~l~D~-~r~~~~~~I~~l~~~G 243 (508)
.+.+...+.++++.++|.++....-+...... ....+-+ .+++. +....+ +++.+.+.++.+++.+
T Consensus 30 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~l~~~-~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 108 (268)
T 3r4c_A 30 KVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFD 108 (268)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEECSSCTTCCGGGTTSCCC-EEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHhHHHHhcCCC-cEEEeCCcEEEEcCCeEEEEecCCHHHHHHHHHHHHHcC
Confidence 45667788899999999987665544432211 1111100 11210 012223 3456788889999999
Q ss_pred CcEEEEcCCcH------HHHHHHHHHhCCCCCCCCCcc--ccCCchhhh-h--hcCChhHHhhh---c------ceEeec
Q 010523 244 LGVKMITGDQL------AIAKETGRRLGMGTNMYPSSA--LSGQDRDES-I--VALPVDELIEK---A------DGFAGV 303 (508)
Q Consensus 244 i~v~mlTGD~~------~~a~~ia~~lgi~~~~~~~~~--~~~~~~~~~-~--~~~~~~~~~~~---~------~v~a~~ 303 (508)
+.+.+.+.+.. .......+..+.......... +........ . .......+... . ..+.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei 188 (268)
T 3r4c_A 109 FAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADV 188 (268)
T ss_dssp CEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEEEE
T ss_pred cEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeEEE
Confidence 99888887653 223334455554321111000 000000000 0 00000011111 0 112334
Q ss_pred Ch--hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 304 FP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 304 ~P--~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.| ..|...++.+.++ ...|+++||+.||.+|++.|++|+||+++.+.++++||+|+.+++-+++.++|+
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 44 3687777776554 346999999999999999999999999999999999999999999999998886
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.1e-09 Score=105.26 Aligned_cols=67 Identities=24% Similarity=0.234 Sum_probs=59.2
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
..|...++.+.++ ...|+++||+.||.+|++.|++||||+++.+.++++||+|+.+++-+++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4687777776554 345999999999999999999999999999999999999999999999998887
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.71 E-value=7.5e-08 Score=88.98 Aligned_cols=129 Identities=14% Similarity=0.104 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... +...+..+.+.. ....-...|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 99999999999999999999998531 101111111000 0000125688
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+...+..|+|+||+.||.+|.+.|++++++....+ .+..++.++.-+++..+...+.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHH-HHHHCTTSCEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHH-HHHHHhhhccccchHHHHHHHH
Confidence 8999999998888899999999999999999999999854433 4444443332366888877664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=92.63 Aligned_cols=129 Identities=9% Similarity=0.058 Sum_probs=89.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCC-CCCCcccc-CCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTN-MYPSSALS-GQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+...... .+.... .......+|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------ccCCCCCCc
Confidence 679999999999999999999999999999999999998531 11111110 000000 001123456
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCCCChhhhhc----CCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 306 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKK----ADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 306 ~~K~~iV~~l-~~~g~~v~~vGDG~ND~~al~~----AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
..|...+..+ .-....|+|+||+.||.+|++. +.++++++++.+..+..||+++. ++..+.+.+
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 6677666554 5567899999999999999975 33444445667778889999984 477776543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=9.4e-08 Score=87.51 Aligned_cols=136 Identities=14% Similarity=0.168 Sum_probs=87.6
Q ss_pred cccccCceEEEeeeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCc-hhh-hccceEEEEecCCCCCceEEE
Q 010523 71 GTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-KEA-RADIQEVHFLPFDPTGKRTAL 148 (508)
Q Consensus 71 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~-~~~-~~~~~~~~~~pf~~~~kr~s~ 148 (508)
||||+|+++|..+.......+.+.++++.+++.++..++| |+++||+.++.+. ... ....+.++..|-. -...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~----Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEH-PLGTAITKYCKQELDTETLGTCIDFQVVPGC----GISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSC-HHHHHHHHHHHHHHTCSCCCCCBCCEEETTT----EEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCC-HHHHHHHHHHHhhcCCCCCCCccceEEeccc----eEEE
Confidence 8999999999875431111345788899999999888776 9999999987421 100 1112223333321 1222
Q ss_pred EEEecC-----------------------------------------------CeEEEEEcCcHHHHHhhhcCChhHHHH
Q 010523 149 TYIDSE-----------------------------------------------GKMHRVTKGSPEQILNLLHNKSKIGRK 181 (508)
Q Consensus 149 ~~~~~~-----------------------------------------------g~~~~~~kGa~e~il~~~~~~~~~~~~ 181 (508)
.+.+.+ .+.+.+..|++++|.+... .+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 222200 0115788899999865321 12234
Q ss_pred HHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCC
Q 010523 182 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP 227 (508)
Q Consensus 182 ~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~ 227 (508)
+...+.++..+|..++.||.+. +++|++.+.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4556778888999999999876 89999999985
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.4e-08 Score=93.83 Aligned_cols=126 Identities=13% Similarity=0.116 Sum_probs=92.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+........++..+. ......|+-
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~------------------~~~kp~~~~ 132 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE------------------APPKPHPGG 132 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT------------------SCCTTSSHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC------------------CCCCCCHHH
Confidence 46899999999999999999999999999999999999843210011111100 011122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
-..+.+.+.-....|+++||+.||..|.+.|++ +|+|+++.+..++.||+++. ++..+...+..
T Consensus 133 ~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~--~~~el~~~~~~ 197 (205)
T 3m9l_A 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHAR--DCAQLRDLLSA 197 (205)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECS--SHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeC--CHHHHHHHHHh
Confidence 344555555455679999999999999999999 99999877777788999984 58888877764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.4e-08 Score=93.08 Aligned_cols=127 Identities=21% Similarity=0.273 Sum_probs=92.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCHH
Confidence 35789999999999999999999999999999999999874321 111111110 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe---eEEecC-chHHHHh-hcchhccCCChhHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVAD-ATDAARS-AADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv---GIa~~~-~~~~a~~-aADivl~~~~l~~i~~~i~~~ 374 (508)
--..+.+.+.-....|+++||+.||+.|++.|++ +|++++ ..+..+. .||+++ +++..+...++.+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 3445666666666789999999999999999999 888884 4344444 799998 4599888887754
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=93.31 Aligned_cols=66 Identities=24% Similarity=0.225 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++.+++.++|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688777777553 346999999999999999999999999988889999999999989999998876
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1e-07 Score=89.34 Aligned_cols=125 Identities=19% Similarity=0.249 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC-CCCCCcc-------ccCCchhhhhhcCChhHHhhhcc
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSA-------LSGQDRDESIVALPVDELIEKAD 298 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 298 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.+...+ +.+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------- 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------- 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT-----------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC-----------------
Confidence 578999999999999999999999999999999999999853 1111110 000000
Q ss_pred eEeecChhhHHHHHHHHhhc-C-CEEEEEcCCCCChhhhhcCCeeEEecCc--hHHHHhhcchhccCCChhHHHHH
Q 010523 299 GFAGVFPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 299 v~a~~~P~~K~~iV~~l~~~-g-~~v~~vGDG~ND~~al~~AdvGIa~~~~--~~~a~~aADivl~~~~l~~i~~~ 370 (508)
....+.+..|..+++.+.++ | ..|+|+||+.||..+.+.|+++|+++.. .+.....+|+++.+ +..+...
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~ 222 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGE 222 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC-
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHH
Confidence 00011233566666655443 3 5799999999999999999998888742 23445568888844 6665543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-07 Score=89.40 Aligned_cols=127 Identities=13% Similarity=0.156 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ..++.++.. ....-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCcc-----------------CCCCCCHH
Confidence 457899999999999999999999999888888888777642211 112211110 01112344
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCChhhhhcCC---eeEEecCc------------------------hHHHHhh-cch
Q 010523 307 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-ADI 357 (508)
Q Consensus 307 ~K~~iV~~l~~~g-~~v~~vGDG~ND~~al~~Ad---vGIa~~~~------------------------~~~a~~a-ADi 357 (508)
--..+.+.+.-.. ..|+++||+.||..|++.|+ ++++++++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4455666666555 78999999999999999999 56666654 2334444 899
Q ss_pred hccCCChhHHHHHHHH
Q 010523 358 VLTEPGLNVIITAVLI 373 (508)
Q Consensus 358 vl~~~~l~~i~~~i~~ 373 (508)
++ +++..+...+..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 458888777653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.4e-07 Score=86.93 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=79.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.++.. ......|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChHH
Confidence 678999999999999999999999754 66777888874321 111111110 011122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
-..+.+.+.-....|+|+||+.||+.|.+.|++++++.++.+..+ .||+++.+.+-..+..+++
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHH
Confidence 345666666666789999999999999999999999987766666 8999986644333444443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.3e-07 Score=88.09 Aligned_cols=126 Identities=10% Similarity=0.103 Sum_probs=87.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... ...-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 146 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG-----------------KLSTKED 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------SSCSHHH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC-----------------CCCCCHH
Confidence 56899999999999999999999999999999999999874211 1111110000 0001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe---eEEecCchH--HHHhhcchhccCCChhHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATD--AARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv---GIa~~~~~~--~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
--..+.+.++-....|+++||+.||..|.+.|++ +++++++.. ..+..||+++. ++..+...+..
T Consensus 147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 2233444554445689999999999999999999 777775332 23688999984 58888877763
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.45 E-value=7.4e-07 Score=83.70 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=75.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE-eecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-a~~~P 305 (508)
.+.|++.+.++.|++.|+++.++||.....+..+.+.+|+.. .+.......+.. .. ..+. ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~---~~----------g~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDGR---YT----------GRIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETTE---EE----------EEEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECCE---Ee----------eeecCCCCcc
Confidence 468999999999999999999999999999999999999852 111100000000 00 0000 11234
Q ss_pred hhHHHHHHHHhh-cC------CEEEEEcCCCCChhhhhcCCeeEEecCchH
Q 010523 306 EHKYEIVKHLQA-RN------HICGMIGNGVNDAPALKKADIGIAVADATD 349 (508)
Q Consensus 306 ~~K~~iV~~l~~-~g------~~v~~vGDG~ND~~al~~AdvGIa~~~~~~ 349 (508)
..|...++.+.+ .| ..|+++||+.||.+|++.|++++++.....
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHH
Confidence 667766655433 34 689999999999999999999999964433
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-07 Score=87.84 Aligned_cols=122 Identities=4% Similarity=-0.043 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.+++.|+++.++|++ ..+..+.+.+|+.... ..++.++.. ......|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTS-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccC-----------------CCCCCChH
Confidence 35789999999999999999999998 3445666777764211 111111110 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
--..+.+.+.-....|+++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+-.++..+
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~ 212 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFL 212 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHH
Confidence 3344555555556679999999999999999999999998877777 89999866444444433
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.7e-07 Score=90.33 Aligned_cols=131 Identities=15% Similarity=0.171 Sum_probs=90.1
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCC---------------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhh
Q 010523 227 PPIHDSAETIRRALSL-GLGVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDES 284 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~-Gi~v~mlTGD---------------------~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~ 284 (508)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........++.
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4578999999999887 9999988876 3344445555555521110000000000
Q ss_pred hhcCChhHHhhhcceEeecCh--hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchh
Q 010523 285 IVALPVDELIEKADGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358 (508)
Q Consensus 285 ~~~~~~~~~~~~~~v~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADiv 358 (508)
....+....| ..|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..+..||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333333 3566666655443 3569999999999999999999999999999999999999
Q ss_pred ccCCChhHHHHHHH
Q 010523 359 LTEPGLNVIITAVL 372 (508)
Q Consensus 359 l~~~~l~~i~~~i~ 372 (508)
+.+++-+++.++|+
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 99999999988886
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.4e-07 Score=89.35 Aligned_cols=64 Identities=22% Similarity=0.293 Sum_probs=55.1
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR-N-----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~-g-----~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.+|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++...++-+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888777654 3 679999999999999999999999999888 4 7889998888899888776
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.38 E-value=2.7e-07 Score=85.60 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.+++.|+++.++|+..........+.+|+.... ..++..+.. ......|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-----------------~~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL-----------------PYSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS-----------------SCCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEecccc-----------------CCCCCChH
Confidence 35689999999999999999999999988888888888874211 111111100 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe----cCchHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~----~~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
--..+.+.++-....|+++||+.||.+|++.|++++++ +++.+..+..||+++.+ +..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHhH
Confidence 33455566655566799999999999999999999998 44444567789998854 555443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.37 E-value=2.9e-07 Score=85.96 Aligned_cols=125 Identities=15% Similarity=0.125 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccC-----------------CCCCCChH
Confidence 35689999999999999999999999999899999988885321 111111110 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe---eEEec-CchHHHHhh-cchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVA-DATDAARSA-ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv---GIa~~-~~~~~a~~a-ADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|+++||+.||..|.+.|++ +++++ +..+..+.. ||+++. ++..+...++
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLD 220 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHH
Confidence 3334445554445679999999999999999998 55555 445555554 899984 5888887765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.6e-07 Score=85.57 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=90.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ......|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEeccc-----------------CCCCcCHH
Confidence 35789999999999999999999999998888888888885321 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe----cCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~----~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
--..+.+.+.-....|+++||+.||..|.+.|++++++ +++.+..+..+|+++. ++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 33445566655567799999999999999999999998 4554445667999984 58888887763
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-07 Score=85.42 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=79.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ..++..+.. ......|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----------------~~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDV-----------------THHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGC-----------------SSCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhc-----------------CCCCCChHH
Confidence 3589999999999999999999999988888888888774321 111111000 000111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe----cCchHHHHhh-cchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSA-ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~----~~~~~~a~~a-ADivl~~~~l~~i~~~i~ 372 (508)
-..+.+.+.-....|+++||+.||.+|++.|++++++ .++.+..+.. ||+++.+ +..+...+.
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 218 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST--LGQLISVPE 218 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--GGGGC----
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--HHHHHHhhh
Confidence 2344455544456799999999999999999998776 3444444444 8988854 666655553
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-06 Score=83.76 Aligned_cols=127 Identities=14% Similarity=0.120 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+....+ ..++.++.. ....-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDV-----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGS-----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhc-----------------CCCCCCHH
Confidence 467899999999999999999999999988888888887643211 111111110 00111233
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCChhhhhcCC---eeEEecC------------------------chHHHH-hhcch
Q 010523 307 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKAD---IGIAVAD------------------------ATDAAR-SAADI 357 (508)
Q Consensus 307 ~K~~iV~~l~~~g-~~v~~vGDG~ND~~al~~Ad---vGIa~~~------------------------~~~~a~-~aADi 357 (508)
--..+.+.+.-.. ..|+||||+.||..|.+.|+ |+|+++. +.+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 3345566666666 78999999999999999999 4566652 223333 34899
Q ss_pred hccCCChhHHHHHHHH
Q 010523 358 VLTEPGLNVIITAVLI 373 (508)
Q Consensus 358 vl~~~~l~~i~~~i~~ 373 (508)
++. ++..+..++..
T Consensus 253 v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 253 VID--SVADLETVITD 266 (277)
T ss_dssp EES--SGGGTHHHHHH
T ss_pred Eec--CHHHHHHHHHH
Confidence 984 48888877763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-06 Score=82.43 Aligned_cols=134 Identities=14% Similarity=0.068 Sum_probs=89.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhh--hh---cCChhHHhhhcceEe
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDES--IV---ALPVDELIEKADGFA 301 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~v~a 301 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+ |+.. + ..++.++..... +. ..+. ...+.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~~~~~~~~~~kp~------p~~~~ 145 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFDNDYIHIDWPHSC------KGTCS 145 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECSSSBCEEECTTCC------CTTCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEcCCceEEecCCCC------ccccc
Confidence 578999999999999999999999999888887777 6532 1 222222111000 00 0000 00011
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhh--cchhccCCChhHHHHHHHH
Q 010523 302 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSA--ADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~a--ADivl~~~~l~~i~~~i~~ 373 (508)
+-....|..+++.+......|+|+||+.||+++.+.|++.++..+..+..... +|+++ +++..+...+..
T Consensus 146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 11245688899998877889999999999999999999988653322333333 77777 458888877653
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.26 E-value=3e-07 Score=94.04 Aligned_cols=115 Identities=13% Similarity=0.126 Sum_probs=74.5
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhc-ceEeec
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-DGFAGV 303 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~a~~ 303 (508)
...++|++++.|+.|+++|++|+|+||.....+..+|+++|+..++.+..++ |......-+. .+..+. ....-+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG----~~tg~~~~~~p~~ 293 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEG----KILPKFDKDFPIS 293 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTC----CEEEEECTTSCCC
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCC----ceeeeecCcccee
Confidence 3457899999999999999999999999999999999999975443332222 1111000000 000000 000113
Q ss_pred ChhhHHHHHHHHhhc---CCEEEEEcCCCCChhhhhc-CCeeEEe
Q 010523 304 FPEHKYEIVKHLQAR---NHICGMIGNGVNDAPALKK-ADIGIAV 344 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~---g~~v~~vGDG~ND~~al~~-AdvGIa~ 344 (508)
..+.|...|+.+-.. ...++++|||.||.+||+. +|.++++
T Consensus 294 ~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 294 IREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp STHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 467899988876432 2347899999999999985 5554444
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.26 E-value=4e-07 Score=82.92 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=81.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.|++.|+++.++|+....... ..+.+|+.... ..++..+.. ......|+-
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 145 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSG-----------------FVRKPSPEA 145 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSHH
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcC-----------------CCCCCCcHH
Confidence 5789999999999999999999999987777 77777774210 011110000 001112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-..+.+.++-....|+++||+.||.+|++.|+++ |+|+++. . .+|+++. ++..+.+.+
T Consensus 146 ~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 146 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 3455566655566799999999999999999997 8888765 2 6898885 466665543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.1e-07 Score=85.22 Aligned_cols=124 Identities=13% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ......|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLD-----------------GTRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTT-----------------SCCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEecccc-----------------CCCCCCHH
Confidence 46789999999999999999999999999999999999884311 111111000 00011122
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCe---eEEecCch--HHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI---GIAVADAT--DAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~Adv---GIa~~~~~--~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.+.-. ...|+++||+.||..|.+.|++ +++++++. +..+..+|+++.+ +..+...|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 223445555555 6679999999999999999998 66666433 2335789999854 77766554
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.9e-06 Score=80.48 Aligned_cols=124 Identities=17% Similarity=0.164 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecccc-----------------CCCCcCHH
Confidence 4578999999999999 999999999998888888888874211 011110000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCC---eeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Ad---vGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|+++||+. ||..|.+.|+ ++++++++.+..+..+|+++. ++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 33445555655567899999997 9999999999 577777666666678999985 4888877665
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.24 E-value=9.8e-07 Score=82.35 Aligned_cols=124 Identities=9% Similarity=0.045 Sum_probs=82.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+++. ......
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEV-----------------LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheecccc-----------------CCCCCC
Confidence 47899999999999999999999998 88888888888874211 111110000 001112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEe---cCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~---~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
|+--..+.+.+.-....|+++||+. ||..|++.|++++++ +++.+..+..+|+++. ++..+...+.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 3222344455544456799999999 999999999999988 3322223345788774 4777776654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.8e-07 Score=84.42 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ......|+
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEV-----------------RLFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhc-----------------ccCCCChH
Confidence 46789999999999999999999999998888888888884311 111111000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe----cCchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV----ADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~----~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.+.-....|+++||+.||..|.+.|++++++ +++.+..+..+|+++. ++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 33445555555566799999999999999999999888 3344444567898885 477776554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.23 E-value=9.4e-07 Score=83.61 Aligned_cols=126 Identities=17% Similarity=0.109 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+....+. |+........++.++.. ......|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~-----------------~~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV-----------------KYGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC-----------------CCCCCChH
Confidence 4678999999999999999999999887776666666 77432110122222111 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch----HHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT----DAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~----~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|+++||+.||..|.+.|+++ |.+..+. +..+..+|+++. ++..+...+.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 33445555555566799999999999999999984 5555332 223346899984 5888877665
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.22 E-value=4.7e-07 Score=86.18 Aligned_cols=122 Identities=16% Similarity=0.173 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCHH
Confidence 46789999999999999999999999999899999999984311 1111111100 0111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC----chHHHHhhcchhccCCChhHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~----~~~~a~~aADivl~~~~l~~i~~ 369 (508)
--..+.+.+.-....|+++||+.||.+|.+.|+++ +.+.. +.+..+..+|+++.+ +..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~--~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC--HHHHHH
Confidence 44455666655567799999999999999999988 44443 233346678988844 655543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.1e-06 Score=82.92 Aligned_cols=127 Identities=15% Similarity=0.066 Sum_probs=81.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.++.. ......|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 35678999999999999999999999887777666666 77432110112211110 0111223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--h--HHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--T--DAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~--~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+--..+.+.+.-....|+++||+.||..|.+.|++. |.+..+ . +..+..||+++. ++..+...+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 333455666665567799999999999999999964 445432 2 222347999985 4888776665
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.1e-06 Score=77.46 Aligned_cols=126 Identities=12% Similarity=0.126 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhC--CCCCCCCCccccCCchhhhhhcCC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALSGQDRDESIVALP 289 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lg--i~~~~~~~~~~~~~~~~~~~~~~~ 289 (508)
++.|++.++++.|++.|+++.++|+... ..+....+.+| +..- +......++..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~-------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FMCPHGPDDGC-------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EEECCCTTSCC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEcCCCCCCCC--------
Confidence 4679999999999999999999999875 45566666777 3210 00000000000
Q ss_pred hhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe---eEEecCchHHHH----hhcchhccCC
Q 010523 290 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI---GIAVADATDAAR----SAADIVLTEP 362 (508)
Q Consensus 290 ~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv---GIa~~~~~~~a~----~aADivl~~~ 362 (508)
.+....|+-=..+.+.+.-....++||||+.||..+.+.|++ +|..+.+..... ..+|+++.+
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~- 167 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCED- 167 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESS-
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecC-
Confidence 011122333344556666566789999999999999999995 555555444433 457999854
Q ss_pred ChhHHHHHHH
Q 010523 363 GLNVIITAVL 372 (508)
Q Consensus 363 ~l~~i~~~i~ 372 (508)
+..+.+.+.
T Consensus 168 -l~el~~~l~ 176 (179)
T 3l8h_A 168 -LAAVAEQLL 176 (179)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 888777664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.7e-06 Score=80.99 Aligned_cols=122 Identities=10% Similarity=0.074 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEccccc-----------------CCCCCChH
Confidence 35789999999999999999999999999999999999984311 111111000 01112233
Q ss_pred hHHHHHHHHhhcCC-EEEEEcCCCCChhhhhcCCe-eEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~-~v~~vGDG~ND~~al~~Adv-GIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-... .|+++||+.||..|.+.|++ +|.++++.. ..+|+++. ++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceeeC--CHHHHHHHHH
Confidence 33455666665565 79999999999999999997 677776543 35677774 4888776664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.7e-06 Score=82.73 Aligned_cols=126 Identities=17% Similarity=0.089 Sum_probs=85.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcce-EeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADG-FAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~a~~~P~ 306 (508)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... +...++.++.. . .....|+
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~~i~~~~~~-----------------~~~~Kp~~~ 172 (259)
T 4eek_A 111 AIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-AGEHIYDPSWV-----------------GGRGKPHPD 172 (259)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-HCSCEECGGGG-----------------TTCCTTSSH
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-ccceEEeHhhc-----------------CcCCCCChH
Confidence 568999999999999999999999999888988888887321 01101111000 0 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc-------h-HHHHhhcchhccCCChhHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA-------T-DAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~-------~-~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
--..+.+.+.-....|++|||+.||..|.+.|+++ |.+..+ . +.....+|+++. ++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 23445555555557799999999999999999998 555433 2 233355899984 58888888764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.5e-07 Score=86.18 Aligned_cols=128 Identities=11% Similarity=0.014 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCC--cEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 227 PPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi--~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
++.+++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ..++.++..... .......
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp~ 206 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKPH 206 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTTS
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCcC
Confidence 568999999999999999 99999999999999999999985321 111111110000 0011122
Q ss_pred hhhHHHHHHHHhhcC-CEEEEEcCCCCChhhhhcCCeeEEecCchHHH------HhhcchhccCCChhHHHHHH
Q 010523 305 PEHKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAVADATDAA------RSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 305 P~~K~~iV~~l~~~g-~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a------~~aADivl~~~~l~~i~~~i 371 (508)
|+--..+.+.+.-.. ..|+++||+.||..|.+.|++|.+|+.+.... ...||+++.+ +..+..++
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 332334455555555 78999999999999999999988887433221 3377888844 66665443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-06 Score=81.81 Aligned_cols=124 Identities=14% Similarity=0.128 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... + ..++.+++. ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-f-~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-F-DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-C-SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-h-eEEEecCcC-----------------CCCCCChH
Confidence 4688999999999999999999999999888889999987421 1 111111110 01122344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc--hHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA--TDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
-...+++.+.-....|+++||+.||.+|.+.|++. |++..+ .... ..+|+++. ++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 44556666655567799999999999999999987 666532 2112 56788874 4777776654
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-05 Score=69.78 Aligned_cols=131 Identities=13% Similarity=0.106 Sum_probs=84.5
Q ss_pred cccCceEEEeeeeecccC--CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchh-h-hccceEEEEecCCCCCceEEE
Q 010523 73 LTLNKLTVDKNLIEIFAG--GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE-A-RADIQEVHFLPFDPTGKRTAL 148 (508)
Q Consensus 73 LT~n~m~v~~~~i~~~~~--~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~-~-~~~~~~~~~~pf~~~~kr~s~ 148 (508)
||+|+|+|.++.. +.. +.+.++++.+++.++..++| |+++||+.++..... . ....+.++.+|-. -+..
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~SeH-PlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~----Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSEH-PLGVAVTKYCKEELGTETLGYCTDFQAVPGC----GIGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSCS-TTHHHHHHHHHHHHTCCCCCCEEEEEEETTT----EEEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCCC-hHHHHHHHHHHHhcCCCCCCCcCceEEecCc----cEEE
Confidence 8999999987532 221 35778899999999888776 999999998742200 0 1123344444422 2222
Q ss_pred EEEec------------------------------CCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEE
Q 010523 149 TYIDS------------------------------EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLA 198 (508)
Q Consensus 149 ~~~~~------------------------------~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~ 198 (508)
.+... ..+.+.+..|+++++.+... .+...+...+..+..+|..+++
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 23221 12335778899998865321 1122344556677889999999
Q ss_pred EEeeecCCCCccCCCCCcEEEEEeccCC
Q 010523 199 VAYQEVPEGSKESSGSPWQFIGLIPLFD 226 (508)
Q Consensus 199 vA~~~~~~~~~~~~e~~l~~lG~i~l~D 226 (508)
||.+. +++|++.+.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99876 8999999987
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.4e-06 Score=79.76 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=78.0
Q ss_pred CCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.... . .+..+.+. .. .|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~------------------~~--~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDA------------------LD--RNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTC------------------SS--GGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCC------------------cC--ccc
Confidence 578999999999999 9999999999998888888888875321 1 11111110 00 111
Q ss_pred hHH----HHHHHHh--hcCCEEEEEcCCCCChhhhhcCCe---eEEecCchHH-HHh-hcchhccCCChhHHHHHHH
Q 010523 307 HKY----EIVKHLQ--ARNHICGMIGNGVNDAPALKKADI---GIAVADATDA-ARS-AADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~----~iV~~l~--~~g~~v~~vGDG~ND~~al~~Adv---GIa~~~~~~~-a~~-aADivl~~~~l~~i~~~i~ 372 (508)
.+. .+.+.+. -....|+++||+.||.+|.+.|++ +++.+..... .+. .+|+++.+ +..+...+.
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l~ 226 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHHH
Confidence 122 2334444 334579999999999999999995 4444433332 222 38888854 555555443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.12 E-value=8.1e-07 Score=81.41 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeecccc-----------------cCCCCChH
Confidence 36789999999999999999999999999999999999884311 111111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCc--hHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA--TDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~--~~~a~~aADivl~~~~l~~i~ 368 (508)
--..+.+.+.-....|+++||+.||..|.+.|++++.+.+. ....+..+|+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHHH
Confidence 33455666655567799999999999999999998777532 33334678888854 55543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.7e-06 Score=78.10 Aligned_cols=117 Identities=12% Similarity=0.034 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC-
Q 010523 227 PPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 304 (508)
++.+++.+.++.|++.| +++.++|+..........+.+|+.... . .+++.-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-~-------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-D-------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-S-------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-h-------------------------eeeecCCC
Confidence 45789999999999999 999999999888888888888874211 0 0122212
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEec-------CchHHHHhh-cchhccCCChhHHHHHH
Q 010523 305 -PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA-------DATDAARSA-ADIVLTEPGLNVIITAV 371 (508)
Q Consensus 305 -P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~-------~~~~~a~~a-ADivl~~~~l~~i~~~i 371 (508)
|+--..+.+.+.-....|+++||+. ||..|.+.|++++++- ++....... +|+++. ++..+...+
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHhc
Confidence 2222334444444456799999996 9999999999987762 233222333 488884 477776543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=76.26 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFE-----------------GVKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCC-----------------CCCCCCHH
Confidence 35789999999999999999999999988888888888874311 111111100 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEe---cCchHHHH---hhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAV---ADATDAAR---SAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~---~~~~~~a~---~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|+++||+. ||..|.+.|+++... +....... ..+|+++. ++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 22344455554556799999998 999999999987543 32222233 26888884 4777766553
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.10 E-value=1.5e-06 Score=84.34 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=58.2
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-+++.++|+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3677777776554 346999999999999999999999999998889999999999888899998886
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.2e-06 Score=80.89 Aligned_cols=125 Identities=14% Similarity=0.085 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEcccc-----------------CCCCCCHH
Confidence 46799999999999999999999999998888888898874211 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEE---ecCchHHHHhhc-chhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA---VADATDAARSAA-DIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa---~~~~~~~a~~aA-Divl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|+++||+.||..|.+.|++... .++..+..+..+ |+++. ++..+...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 233 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVN--SLSELWPLLA 233 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEES--SGGGHHHHHC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeC--CHHHHHHHHH
Confidence 3344555555556679999999999999999996543 333222223456 88874 4777776553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-06 Score=83.46 Aligned_cols=67 Identities=12% Similarity=0.219 Sum_probs=56.9
Q ss_pred eecChh--hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcC--CeeEEecCchHHHHhhcchhccC-CChhHHHHHHH
Q 010523 301 AGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKA--DIGIAVADATDAARSAADIVLTE-PGLNVIITAVL 372 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~A--dvGIa~~~~~~~a~~aADivl~~-~~l~~i~~~i~ 372 (508)
.++.|. +|..-++.|.+.-. |+++||+.||.+||+.| ++||||+++ ++.||+++.+ ++-+++.++|+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 445554 79999999887633 99999999999999999 999999998 6789999987 77888888776
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-06 Score=82.24 Aligned_cols=124 Identities=10% Similarity=0.086 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++.. ......|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEeccc-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888874211 111111100 01122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec----CchHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~----~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.+.-....|+++||+.||..|.+.|++++++- +..+..+..+|+++. ++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 334455666555567999999999999999999998773 222223456788874 477666544
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.3e-06 Score=84.51 Aligned_cols=72 Identities=29% Similarity=0.294 Sum_probs=60.9
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhcc-CCChhHHHHHHH
Q 010523 301 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT-EPGLNVIITAVL 372 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~-~~~l~~i~~~i~ 372 (508)
.++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-+++.++|+
T Consensus 216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 344444 688888777654 246999999999999999999999999998889999999999 889999998886
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.05 E-value=2.1e-06 Score=84.06 Aligned_cols=66 Identities=23% Similarity=0.294 Sum_probs=57.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 577777776553 346999999999999999999999999998899999999999999999998886
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.03 E-value=5.2e-06 Score=77.58 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|+ .|+++.++|+..........+.+|+.... ..++.++.. ......|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccC-----------------CCCCCCHH
Confidence 45789999999999 99999999999988888888888874321 111111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEecCchH--HHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATD--AARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~~~~~--~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.+.-....|+++||+. ||..|.+.|++++++.+... ..+..+|+++.+ +..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHHH
Confidence 22334444444456799999995 99999999999999875433 455678999854 77665543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=2.7e-06 Score=81.31 Aligned_cols=66 Identities=17% Similarity=0.132 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhh-------cchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSA-------ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~a-------ADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-+++.++|+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 577777776654 246999999999999999999999999998888885 889999999999998886
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.02 E-value=7.6e-06 Score=77.40 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=80.7
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.....+..+-+.+|+. . + ..++.++... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCCC-----------------CCCCCHHH
Confidence 4689999999999999999999999888888888888874 2 1 1222211100 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe--cCch-HHH-HhhcchhccCCChhHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV--ADAT-DAA-RSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~--~~~~-~~a-~~aADivl~~~~l~~i~~~i 371 (508)
=..+.+.+.-....|+||||+.||..|.+.|++. |++ +.+. +.. ...+|+++. ++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 2344455554566799999999999999999984 444 4322 333 346888884 477766544
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.00 E-value=2e-06 Score=83.25 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=60.0
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
++.|. .|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++.+++.++|+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 44444 688777777553 356999999999999999999999999988888999999999888999988875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=7.1e-06 Score=76.48 Aligned_cols=135 Identities=18% Similarity=0.184 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~---------------~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
++.|++.++++.|++.|+++.++|+.. ...+..+.+.+|+. +..........+....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~----- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVE----- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSG-----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCccc-----
Confidence 678999999999999999999999998 46677777888874 2111111111000000
Q ss_pred HHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecC---chHHHHhhcchhccCCChhH
Q 010523 292 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~---~~~~a~~aADivl~~~~l~~ 366 (508)
+. .....+..-.|+--..+.+.+.-....|+||||+.||..+.+.|++. |.+.. ..+.....+|+++. ++..
T Consensus 122 ~~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l~e 198 (211)
T 2gmw_A 122 EF-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLAD 198 (211)
T ss_dssp GG-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGG
T ss_pred cc-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CHHH
Confidence 00 00001112233333445555555566799999999999999999963 44432 22333456898884 4888
Q ss_pred HHHHHH
Q 010523 367 IITAVL 372 (508)
Q Consensus 367 i~~~i~ 372 (508)
+...+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.96 E-value=6e-06 Score=80.00 Aligned_cols=114 Identities=14% Similarity=0.031 Sum_probs=78.3
Q ss_pred CCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. + ..++.+++.. .....|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 468999999999999 99999999999988888888888742 1 1222221100 0111233
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCCCChhhhhcCCeeEEe---cCchHHHH-hhcchhccC
Q 010523 307 HKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAV---ADATDAAR-SAADIVLTE 361 (508)
Q Consensus 307 ~K~~iV~~l~~-------~g~~v~~vGDG~ND~~al~~AdvGIa~---~~~~~~a~-~aADivl~~ 361 (508)
--..+.+.+.- ....|+++||+.||..|++.|++++++ +++.+..+ ..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 33455566665 556799999999999999999977555 43333333 358988754
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.94 E-value=1e-05 Score=72.95 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=70.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.|++.|+++.++|+... .+....+.+|+.... ..++.++.. ......|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSG-----------------FKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGC-----------------CCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeecccc-----------------CCCCCCHHH
Confidence 578999999999999999999998764 566677777763211 001110000 001112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcc
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 356 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aAD 356 (508)
-..+.+.+.-. .|+++||+.||.+|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 23344444433 799999999999999999999888766666666554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.94 E-value=5.7e-06 Score=78.05 Aligned_cols=122 Identities=10% Similarity=0.053 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+........+.+.+|+. +. .++.++.. ......|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~---f~-~~~~~~~~-----------------~~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP---WD-VIIGSDIN-----------------RKYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC---CS-CCCCHHHH-----------------TCCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC---ee-EEEEcCcC-----------------CCCCCCHH
Confidence 4578999999999987 999999999999888989999884 11 11111000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHH----------HHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDA----------ARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~----------a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|++|||+.||..|.+.|++++++.+.... .+..+|+++. ++..+...+.
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~ 247 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLR 247 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhc
Confidence 22234444444456799999999999999999999998752211 2567888884 5888887775
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=75.20 Aligned_cols=124 Identities=11% Similarity=0.103 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.++.. ......|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEeccc-----------------CCCCCChH
Confidence 4678999999999999 999999999988888888888874311 111111000 01111222
Q ss_pred hHHHHHHHHh-hcCCEEEEEcCCC-CChhhhhcCCee-EEecCc--hHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQ-ARNHICGMIGNGV-NDAPALKKADIG-IAVADA--TDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~-~~g~~v~~vGDG~-ND~~al~~AdvG-Ia~~~~--~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+. -....|++|||+. ||..|.+.|+++ |.+..+ .+..+..+|+++. ++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 2233344443 3345799999998 999999999995 445433 4455667899985 4888877664
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.93 E-value=4e-06 Score=79.44 Aligned_cols=122 Identities=11% Similarity=0.091 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+........+.+.+|+. +. .++.++.. ....-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~-~~~~~~~~-----------------~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WD-MLLCADLF-----------------GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CS-EECCHHHH-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cc-eEEeeccc-----------------ccCCCCHH
Confidence 3568999999999885 999999999998888888888874 11 11111000 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecC-----c---hHHH--HhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD-----A---TDAA--RSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~-----~---~~~a--~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|++|||+.||..|.+.|++++++.+ + .+.. +..+|+++. ++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 3334555555556779999999999999999999999875 1 1112 567899984 4888877664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.91 E-value=7.1e-06 Score=78.21 Aligned_cols=123 Identities=13% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|+ |+++.++|+.....+..+.+.+|+.... ..++.++.. ......|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEcccc-----------------CCCCCCHH
Confidence 56799999999999 9999999999999888888888874211 111111100 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCc---------------------------hHHHHhhcchhc
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADA---------------------------TDAARSAADIVL 359 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~---------------------------~~~a~~aADivl 359 (508)
--..+.+.+.-....|+++||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33445555554556799999999999999999999887654 112234578887
Q ss_pred cCCChhHHHHHHH
Q 010523 360 TEPGLNVIITAVL 372 (508)
Q Consensus 360 ~~~~l~~i~~~i~ 372 (508)
. ++..+...+.
T Consensus 232 ~--~~~el~~~l~ 242 (253)
T 1qq5_A 232 P--ALGDLPRLVR 242 (253)
T ss_dssp S--SGGGHHHHHH
T ss_pred C--CHHHHHHHHH
Confidence 4 4887776654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.89 E-value=7.7e-06 Score=74.90 Aligned_cols=121 Identities=11% Similarity=0.119 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.++.. ....-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhc-----------------CCCCCCHH
Confidence 35689999 9999999 999999999988888888888874321 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe-c---CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-A---DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~-~---~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.++ ...|+++||+.||..|.+.|+++..+ . +..+.....+|+++. ++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 3344556665 56799999999999999999998666 2 222222345788874 4777766553
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.88 E-value=7.7e-06 Score=76.31 Aligned_cols=122 Identities=12% Similarity=0.109 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++ |+++.++|+..........+.++- .+ ..++.+.+. ......|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~~~~-----------------~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITAQDV-----------------GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEHHHH-----------------TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEcccc-----------------CCCCCCHH
Confidence 568999999999999 899999999888776666554331 11 111111000 01223344
Q ss_pred hHHHH---HHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEecCch-----------HHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEI---VKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADAT-----------DAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~i---V~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~~~~-----------~~a~~aADivl~~~~l~~i~~~i 371 (508)
-.... .+.+.-....|++|||+. ||..|.+.|++++++.+.. +..+..+|+++. ++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHH
Confidence 33344 334444456799999996 9999999999999985422 223477899984 488887766
Q ss_pred H
Q 010523 372 L 372 (508)
Q Consensus 372 ~ 372 (508)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=3e-06 Score=80.48 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia-~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.+++.++++.|++.|+++.++|+.........- +..|+... + ..++.+++.+ .......|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f-~~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-F-SHIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-S-SCEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-e-eeEEecchhh---------------ccCCCCCh
Confidence 46889999999999999999999999866544322 21233211 1 1111111000 00111122
Q ss_pred hhHHHHHHHHhhcC--CEEEEEcCCCCChhhhhcCC---eeEEecCchHHHHhhcchhccCCChhHHH
Q 010523 306 EHKYEIVKHLQARN--HICGMIGNGVNDAPALKKAD---IGIAVADATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 306 ~~K~~iV~~l~~~g--~~v~~vGDG~ND~~al~~Ad---vGIa~~~~~~~a~~aADivl~~~~l~~i~ 368 (508)
+--..+.+.+.-.. ..|++|||+.||..|.+.|+ ++++.+++.+..+..||+++.+ +..+.
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s--l~el~ 240 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS--LQDFQ 240 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC--GGGCC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC--HHHhh
Confidence 22233334443333 78999999999999999999 5566666656677889999854 65543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=8.1e-06 Score=75.87 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=79.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe--ecCh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA--GVFP 305 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a--~~~P 305 (508)
+.+++.+.++.++. ++.++|+........+.+.+|+... ++..++.++.. ... .-.|
T Consensus 88 ~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~-----------------~~~~~kpk~ 146 (229)
T 2fdr_A 88 IIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDL-----------------GADRVKPKP 146 (229)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHH-----------------CTTCCTTSS
T ss_pred cCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEecccc-----------------ccCCCCcCH
Confidence 46788888877764 9999999998888888888887421 10111111000 000 1122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCchH-------HHHhh-cchhccCCChhHHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADATD-------AARSA-ADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~~-------~a~~a-ADivl~~~~l~~i~~~i~ 372 (508)
+--..+.+.+.-....|+++||+.||.+|++.|+++ |++.++.. ..++. ||+++. ++..+...+.
T Consensus 147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 222344555555556799999999999999999998 77775433 35666 999985 4777766553
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=9.7e-07 Score=81.38 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=78.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+++. ......|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 3578999999999999 999999999988888888877763210 011111000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecC----chHHHHhhcchhccCCChhHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~----~~~~a~~aADivl~~~~l~~i~ 368 (508)
--..+.+.++-....|+++||+.||.+|.+.|++++++.+ +.+..+. +|+++.+ +..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 3344555555556679999999999999999999988743 2333444 8888744 55544
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=72.90 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcH---HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQL---AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~---~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
++.|++.++++.|++.|+++.++|+... ..+..+.+.+|+.... ..++...+... .......
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~KP 98 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEKP 98 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCTT
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCCc
Confidence 5789999999999999999999998776 7888888999984311 11111110000 0001122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCee-EEecCchH-----HHH-hhcchhccCCChhHHHHHHHHHH
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVADATD-----AAR-SAADIVLTEPGLNVIITAVLISR 375 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG-~ND~~al~~AdvG-Ia~~~~~~-----~a~-~aADivl~~~~l~~i~~~i~~~R 375 (508)
.|+--..+.+.+......|+||||+ .+|..+-+.|++. |.+..+.. ... ..+|.++...++..+..++...+
T Consensus 99 ~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 3343445556665556789999999 7999999999985 44443321 111 26788887557999998888765
Q ss_pred HH
Q 010523 376 AI 377 (508)
Q Consensus 376 ~~ 377 (508)
.-
T Consensus 179 ~~ 180 (189)
T 3ib6_A 179 KI 180 (189)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1e-05 Score=77.75 Aligned_cols=66 Identities=26% Similarity=0.298 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++.++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 566666555443 457999999999999999999999999988888999999998888888988775
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=1.2e-05 Score=74.33 Aligned_cols=115 Identities=11% Similarity=0.082 Sum_probs=77.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++ |+++.++|+.....+...-+.+|+.... ..+ +.+...+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i-----------------------~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGI-----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEE-----------------------EEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eee-----------------------ecCCCCCC
Confidence 357899999999999 9999999999988888888888884211 111 11111112
Q ss_pred hHHHHHH----HHhhcCCEEEEEcCCCCChhhhhcCCe---eEEecCc-hHHHH-hhcchhccCCChhHHHH
Q 010523 307 HKYEIVK----HLQARNHICGMIGNGVNDAPALKKADI---GIAVADA-TDAAR-SAADIVLTEPGLNVIIT 369 (508)
Q Consensus 307 ~K~~iV~----~l~~~g~~v~~vGDG~ND~~al~~Adv---GIa~~~~-~~~a~-~aADivl~~~~l~~i~~ 369 (508)
.|..+.+ .+.-....|++|||+.||+.|.+.|++ +++++.+ .+..+ ..+|+++.+ +..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 2333333 333334579999999999999999998 5666544 33333 358988854 665544
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.79 E-value=1.5e-05 Score=72.61 Aligned_cols=90 Identities=12% Similarity=0.143 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee--c
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--V 303 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~--~ 303 (508)
++.|++.++|+.|++.|+++.++||.. ...+..+.+.+|+... |.. .
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~------------------------------f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY------------------------------FVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT------------------------------EEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh------------------------------cceeEE
Confidence 578999999999999999999999998 7889999999998531 111 1
Q ss_pred ChhhHHH----HHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC
Q 010523 304 FPEHKYE----IVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD 346 (508)
Q Consensus 304 ~P~~K~~----iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~ 346 (508)
.+..|.. +.+.+.-....|++|||+.+|+.+.+.|++. |.+..
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECC
Confidence 1223333 3333333445799999999999999999985 44443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.78 E-value=6.8e-05 Score=71.05 Aligned_cols=117 Identities=16% Similarity=0.095 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEee--cC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG--VF 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~--~~ 304 (508)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++. ..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 45789999999999 99999999999988888888888874211 0 01221 12
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEec-CchH--------HHHhhcch-hccCCChhHHHHHHH
Q 010523 305 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA-DATD--------AARSAADI-VLTEPGLNVIITAVL 372 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~-~~~~--------~a~~aADi-vl~~~~l~~i~~~i~ 372 (508)
|+--..+.+.+.-....|+++||+. ||..|.+.|++++++- .+.. .....+|+ ++ +++..+...+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 3333445555555567899999999 9999999999987653 3221 11235776 66 44777776654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.2e-05 Score=77.39 Aligned_cols=123 Identities=14% Similarity=0.199 Sum_probs=83.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+.. .......|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~-----------------~~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEA-----------------AGWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHH-----------------HSSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeecc-----------------cCCCCCCHHH
Confidence 5689999999999999999999987664 57777888874211 11111000 0012223444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEecCchHH------HHhhcchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVADATDA------ARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~~~~~~------a~~aADivl~~~~l~~i~~~i~ 372 (508)
-..+.+.+.-....|+||||+. ||+.|.+.|++++++.+.... ....+|+++. ++..+...+.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 4556666665667899999997 999999999999887642211 2236899984 4888887765
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.72 E-value=1.2e-05 Score=78.10 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=33.6
Q ss_pred hHHHHHHHHhh-----cCCE--EEEEcCCCCChhhhhcCCeeEEecCch---HHHHhh--cc-hhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA-----RNHI--CGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--AD-IVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~-----~g~~--v~~vGDG~ND~~al~~AdvGIa~~~~~---~~a~~a--AD-ivl~~~~l~~i~~~i~ 372 (508)
.|...++.+.+ .... ++++||+.||.+|++.|++||+|+++. +..++. || +++.+++-+++.++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 56665555433 2345 999999999999999999999999886 555543 78 8988888999988876
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.62 E-value=4.7e-05 Score=69.30 Aligned_cols=99 Identities=11% Similarity=0.067 Sum_probs=69.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+.. .......|+-
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~-----------------~~~~Kp~~~~ 146 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSA-----------------LGVMKPNPAM 146 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHH-----------------HSCCTTCHHH
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeecc-----------------cCCCCCCHHH
Confidence 6799999999999999 99999999998888888888874211 11111000 0011223333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecC
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 346 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~ 346 (508)
-..+.+.+.-....|+++||+.||..|.+.|++...+-+
T Consensus 147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 344555555556679999999999999999999877653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.60 E-value=1.5e-05 Score=76.17 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=45.8
Q ss_pred hhHHHHHHHHhhc-----CCEEEEEcCCCCChhhhhcCCeeEEecCch-HHHHhhcchhccC
Q 010523 306 EHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIGIAVADAT-DAARSAADIVLTE 361 (508)
Q Consensus 306 ~~K~~iV~~l~~~-----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~-~~a~~aADivl~~ 361 (508)
-+|...++.+.+. ...|+++||+.||.+||+.|++||+|+++. +..++.||+|+.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4577766666443 457999999999999999999999999987 6678889988754
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00015 Score=66.82 Aligned_cols=124 Identities=18% Similarity=0.139 Sum_probs=81.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++.+++. ......|+-
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-d-~~~~~~~~-----------------~~~KP~p~~ 145 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-D-VMVFGDQV-----------------KNGKPDPEI 145 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECGGGS-----------------SSCTTSTHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-c-cccccccc-----------------CCCcccHHH
Confidence 4689999999999999999999999999999999999985321 1 11111100 112233443
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-E-Ee--c-CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-I-AV--A-DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-I-a~--~-~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
=..+.+.+.-....|+||||..+|+.+-+.|++. | ++ + +..+...++.+.++.+ ...+++.+.
T Consensus 146 ~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 146 YLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred HHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 3455666666667899999999999999999974 3 22 3 2334444444444433 344554443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.51 E-value=1.3e-05 Score=73.63 Aligned_cols=102 Identities=6% Similarity=0.002 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH------hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~------lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
++.|++.+.++.|++ |+++.++|+........+.+. +|+.... ..++.++. ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~-----------------~~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQ-----------------MGK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHH-----------------HTC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeecc-----------------cCC
Confidence 357899999999999 999999999887776666655 4542110 00110000 001
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCch
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 348 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~ 348 (508)
....|+--..+.+.+.-....|+++||+.||..|.+.|+++..+.++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 112233334455555555667999999999999999999998887543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=7.3e-05 Score=71.98 Aligned_cols=57 Identities=23% Similarity=0.331 Sum_probs=48.2
Q ss_pred hHHHHHHHH-hhcCCEEEEEcC----CCCChhhhhcCC-eeEEecCchHHHHhhcchhccCCC
Q 010523 307 HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVLTEPG 363 (508)
Q Consensus 307 ~K~~iV~~l-~~~g~~v~~vGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aADivl~~~~ 363 (508)
+|..-++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+..+..||+|+..++
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 577777777 222468999999 999999999999 699999999999999999987654
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.43 E-value=4.7e-05 Score=64.72 Aligned_cols=103 Identities=10% Similarity=0.082 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+ .......|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~-----------------~~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGE-----------------LGVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHH-----------------HSCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEecc-----------------CCCCCCCHH
Confidence 36688999999999999999999999888777777777764311 11111000 001122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCch
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT 348 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~~ 348 (508)
--..+.+.+......++||||+.+|..+.+.+++. |.+..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~ 121 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFD 121 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHH
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChH
Confidence 33344455544455799999999999999999974 3343443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.42 E-value=4.5e-05 Score=71.22 Aligned_cols=136 Identities=15% Similarity=-0.011 Sum_probs=78.0
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 290 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~---------------~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~ 290 (508)
.++.|++.++|+.|++.|+++.++|+... ..+....+.+|+. +..........+..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF---VDMVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc---eeeEEEeecCCCCcee----
Confidence 46789999999999999999999999987 6777788888873 1110000000000000
Q ss_pred hHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeE--EecCc--h-HHHHhhcchhccCCChh
Q 010523 291 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI--AVADA--T-DAARSAADIVLTEPGLN 365 (508)
Q Consensus 291 ~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGI--a~~~~--~-~~a~~aADivl~~~~l~ 365 (508)
+. .....+..-.|.-=..+.+.+.-....++||||+.||..+.+.|++.. .+..+ . +.....+|+++. ++.
T Consensus 128 -~~-~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~--~l~ 203 (218)
T 2o2x_A 128 -LA-IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS--ELG 203 (218)
T ss_dssp -TC-CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH--HHH
T ss_pred -ec-ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc--cHH
Confidence 00 000000111122222344444444567999999999999999999753 33322 1 112234676663 366
Q ss_pred HHHHHHH
Q 010523 366 VIITAVL 372 (508)
Q Consensus 366 ~i~~~i~ 372 (508)
.+...+.
T Consensus 204 el~~~l~ 210 (218)
T 2o2x_A 204 DLLAAIE 210 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00023 Score=68.23 Aligned_cols=123 Identities=10% Similarity=0.117 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++ ++++.++|+.....+....+.+|+.... ..++.+++. ....-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCC-----------------CCCCCCHH
Confidence 467999999999998 6999999999998888888899984321 111111110 01122233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCe--eEEecCchH---HHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADI--GIAVADATD---AARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG-~ND~~al~~Adv--GIa~~~~~~---~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.+.-....|+||||+ .||+.+-+.|++ .|.+..+.. .....+|+++. ++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 3344555555556679999995 999999999999 577763321 12345788774 477776655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00034 Score=64.28 Aligned_cols=95 Identities=11% Similarity=0.061 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++||.....+..+.. . +...++.+++.. ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 467999999999999999999999998877644432 1 111122211110 1112233
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 307 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 307 ~K~~iV~~l~~~g-~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
--....+.+.-.. ..|+||||..+|+.+-+.|++ .|++.
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 2233444444332 579999999999999999997 45554
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00014 Score=69.09 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=42.9
Q ss_pred hHHHHHHHH-hhcCCEEEEEcC----CCCChhhhhcCCe-eEEecCchHHHHhhcchhc
Q 010523 307 HKYEIVKHL-QARNHICGMIGN----GVNDAPALKKADI-GIAVADATDAARSAADIVL 359 (508)
Q Consensus 307 ~K~~iV~~l-~~~g~~v~~vGD----G~ND~~al~~Adv-GIa~~~~~~~a~~aADivl 359 (508)
+|..-++.| .-....|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHCC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhcC
Confidence 566666666 223568999999 9999999999988 9999999999999999873
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.24 E-value=1.5e-05 Score=72.85 Aligned_cols=103 Identities=5% Similarity=-0.035 Sum_probs=62.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~-lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.+.++.|++.|+++.++|+........+... +|+... + ..++.+. + .......|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-~~~~~~~------------~-----~~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLSQ------------D-----LGMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEHH------------H-----HTCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-e-eeEEEec------------c-----cCCCCCCH
Confidence 4578999999999999999999998664332221111 121000 0 0000000 0 00111223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCch
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADAT 348 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~ 348 (508)
+--..+.+.+.-....|+++||+.||..|.+.|++...+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 3344555666555677999999999999999999987766443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00025 Score=72.26 Aligned_cols=138 Identities=13% Similarity=0.101 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+........++.+++....-... ..........|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~------~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY------PQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHS------TTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccccccc------ccccCCCCCCHH
Confidence 57899999999999999999999999999998888899985321101233322211000000 000000111222
Q ss_pred hHHHHHHHHh--------------hcCCEEEEEcCCCCChhhhhcCCee-EEecCc------hHH-HHhhcchhccCCCh
Q 010523 307 HKYEIVKHLQ--------------ARNHICGMIGNGVNDAPALKKADIG-IAVADA------TDA-ARSAADIVLTEPGL 364 (508)
Q Consensus 307 ~K~~iV~~l~--------------~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~------~~~-a~~aADivl~~~~l 364 (508)
-=....+.+. -....|+||||+.+|+.+-++|++. |++..+ .+. ....+|+++.+ +
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~s--l 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH--L 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--G
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECC--H
Confidence 1112222222 1246799999999999999999975 555432 122 23468888854 7
Q ss_pred hHHHHHHH
Q 010523 365 NVIITAVL 372 (508)
Q Consensus 365 ~~i~~~i~ 372 (508)
..+...+.
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 77776553
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00026 Score=65.55 Aligned_cols=118 Identities=17% Similarity=0.196 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++. +++.++|+.... -+.+|+.... ..++.++ . .......|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~~------------~-----~~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCAE------------D-----LGIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEHH------------H-----HTCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEcc------------c-----cCCCCcCHH
Confidence 3578999999999998 999999987653 2333432100 0000000 0 001112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCeeEEec----CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIAVA----DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvGIa~~----~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--..+.+.+.-....|++|||+. ||..|.+.|+++.++- +..+. ...+|+++. ++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 33445555555567799999998 9999999999987762 11122 567888885 4888877664
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00042 Score=66.34 Aligned_cols=43 Identities=21% Similarity=0.334 Sum_probs=34.8
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcC---CcHHHHHHHHHHhCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 267 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 267 (508)
.+.+-+++.++|+++++.|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 344557899999999999999999999 5666666666777874
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00018 Score=67.19 Aligned_cols=103 Identities=9% Similarity=-0.019 Sum_probs=68.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH------hCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR------LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~------lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
++.|++.++++.|++. +++.++|+........+.+. +|+... + ..++.+. + ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~~------------~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-F-EKTYLSY------------E-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-C-SEEEEHH------------H-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-C-CEEEeec------------c-----cCC
Confidence 3568999999999998 99999999998877766543 333110 0 0000000 0 011
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchH
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 349 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~ 349 (508)
....|+--..+.+.+.-....|++|||+.||+.+.+.|+++..+.+..+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 2223344445566666566789999999999999999999988775443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0009 Score=63.98 Aligned_cols=40 Identities=13% Similarity=0.146 Sum_probs=33.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcC---CcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTG---D~~~~a~~ia~~lgi~ 267 (508)
+-+++.++|+++++.|++++++|| ............+|+.
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 346899999999999999999988 6666677777788874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=60.65 Aligned_cols=117 Identities=9% Similarity=-0.004 Sum_probs=69.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+... .+....+.+|+.... ..++.+++. ......|+-
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 155 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPKI 155 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CCH
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHHH
Confidence 568999999999999999999999876 467788888874211 111111100 011122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCC-ChhhhhcCCeeEE-ecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVN-DAPALKKADIGIA-VADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~N-D~~al~~AdvGIa-~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
-..+.+.+.-.. +||||+.+ |..+.+.|++... +..+... .+. +.++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 156 FGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCB--SSHHHHHHHH
T ss_pred HHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEE--CCHHHHHHHH
Confidence 233444443332 99999998 9999999999644 4322110 111 4444 4466666554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00015 Score=65.33 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=63.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCch-hhhhhcCCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDR-DESIVALPV 290 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD---------------~~~~a~~ia~~lgi~~~~~~~~~~~~~~~-~~~~~~~~~ 290 (508)
++.|++.++++.|++.|+++.++|+. ....+..+.+.+|+. +...+..+... ++....++
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP- 117 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKP- 117 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTT-
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCC-
Confidence 57799999999999999999999997 456777788888874 21111111000 00000001
Q ss_pred hHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc
Q 010523 291 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 347 (508)
Q Consensus 291 ~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~ 347 (508)
.|+-=..+.+.+.-....|+||||..+|+.+-+.|++. |.+..+
T Consensus 118 -------------~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 118 -------------KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp -------------SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred -------------CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 11111112233333445689999999999999999985 555543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00087 Score=63.63 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=78.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.+.|+... +..+-+.+|+.... ..++.+++. ......|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~F--d~i~~~~~~-----------------~~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKF--DFIADAGKC-----------------KNNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGC--SEECCGGGC-----------------CSCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccch--hhhHhhhccccccc--ceeeccccc-----------------CCCCCcHH
Confidence 4678999999999999999988776543 45667788885321 112211111 11223344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCchHHHHhhcchhccCCChhHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~~~a~~aADivl~~~~l~~i 367 (508)
-=..+++.+.-....|+||||..+|+.+-+.|++ .|++++..+. ..||+++.+ +..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~~--l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEESS--GGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEECC--hHhC
Confidence 4455666666666789999999999999999998 5777654332 358998854 6554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0017 Score=62.10 Aligned_cols=84 Identities=15% Similarity=0.084 Sum_probs=62.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
.++.|++.+.++.|++.|+++.++||... +.+....+.+|+..-.-. .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-------------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK-------------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-------------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-------------------------eeEe
Confidence 46788999999999999999999999865 477777788999531000 1222
Q ss_pred ecChhhHHHHHHHHhhcC-CEEEEEcCCCCChhh
Q 010523 302 GVFPEHKYEIVKHLQARN-HICGMIGNGVNDAPA 334 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g-~~v~~vGDG~ND~~a 334 (508)
+-....|....+.+.+.| .+|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 323456778888887754 468999999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0024 Score=59.58 Aligned_cols=113 Identities=10% Similarity=0.102 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|++.| ++.++|+.....+....+.+|+.... . . .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~-----------------------~-~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-E-----------------------G-RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-T-----------------------T-CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-C-----------------------e-eEEec---C
Confidence 57899999999999999 99999999988888888888873210 0 0 00111 1
Q ss_pred hHHHHHHHHh--hcCCEEEEEcCCCC---ChhhhhcCCee-EEecCc-----hHHHHhh--cchhccCCChhHHHHH
Q 010523 307 HKYEIVKHLQ--ARNHICGMIGNGVN---DAPALKKADIG-IAVADA-----TDAARSA--ADIVLTEPGLNVIITA 370 (508)
Q Consensus 307 ~K~~iV~~l~--~~g~~v~~vGDG~N---D~~al~~AdvG-Ia~~~~-----~~~a~~a--ADivl~~~~l~~i~~~ 370 (508)
.|..+++.+. -....|+||||+.+ |..+-+.|++. |.+..+ .+..+.. +|+++.+ +..+...
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~ 221 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDLVEM 221 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGGGGC
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHHHHH
Confidence 2222333222 24578999999999 66666778864 444322 2233332 7888744 6655443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0017 Score=62.30 Aligned_cols=84 Identities=13% Similarity=0.068 Sum_probs=61.6
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 301 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 301 (508)
+++.|++.+.++.|++.|+++.++||... +.+..-.+.+|++.-. . ..++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~-~------------------------~~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE-E------------------------SAFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS-G------------------------GGEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc-c------------------------cceec
Confidence 56788999999999999999999999864 4677777889985310 0 01222
Q ss_pred ecChhhHHHHHHHHhhcC-CEEEEEcCCCCChhh
Q 010523 302 GVFPEHKYEIVKHLQARN-HICGMIGNGVNDAPA 334 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g-~~v~~vGDG~ND~~a 334 (508)
+-.-..|....+.+.+.| ..|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 322345777777777774 468999999999985
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0011 Score=63.16 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=47.6
Q ss_pred eecChh--hHHHHHHHHhhcCCEEEEEcC----CCCChhhhhcCC-eeEEecCchHHHHhhcchhc
Q 010523 301 AGVFPE--HKYEIVKHLQARNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 359 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~g~~v~~vGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aADivl 359 (508)
-++.|. +|..-++.|.+....|+++|| |.||.+||+.|+ +|++|+++.+..+..+++..
T Consensus 179 leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 179 FDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKIIA 244 (246)
T ss_dssp EEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHhc
Confidence 344444 677777777666678999999 799999999996 89999999998888776653
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.003 Score=61.66 Aligned_cols=101 Identities=13% Similarity=-0.011 Sum_probs=68.3
Q ss_pred ccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHH---HHHHHH--------hCCCCCCCCCccccCCchhhhhhcCChh
Q 010523 223 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALSGQDRDESIVALPVD 291 (508)
Q Consensus 223 ~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a---~~ia~~--------lgi~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (508)
..++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+. +. .++.+++.
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~~-~~~~~~~~---------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---LV-MQCQREQG---------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---CS-EEEECCTT----------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---ch-heeeccCC----------
Confidence 34678899999999999999999999999885432 233333 5762 11 11111110
Q ss_pred HHhhhcceEeecChhhHHHHHHHHhhcCC-EEEEEcCCCCChhhhhcCCee-EEec
Q 010523 292 ELIEKADGFAGVFPEHKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 292 ~~~~~~~v~a~~~P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
..+..|+-|..+.+.+..... .++|+||..+|+.|-+.|++- |++.
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~ 297 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 297 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence 012346677777777755443 468999999999999999984 4443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.014 Score=54.93 Aligned_cols=40 Identities=28% Similarity=0.260 Sum_probs=34.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 267 (508)
+-+.+.++++.+++.|+++.++| |............+|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788899999999999999999 99888887777777774
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.012 Score=55.98 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=36.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 267 (508)
+++-+++.++|+++++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 4566889999999999999999999 88888887777888874
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0083 Score=56.47 Aligned_cols=100 Identities=9% Similarity=0.035 Sum_probs=67.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~-----------------~~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQL-----------------KNSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGC-----------------SSCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--ccccccccc-----------------cCCCCcHH
Confidence 4678999999999999999999998654 34456777874321 111211111 01222333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCc
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADA 347 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~ 347 (508)
-=....+.+.-....|+||||..+|+.+-++|++ .|++..+
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 3345556666667789999999999999999997 4666643
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.56 E-value=0.013 Score=56.24 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=34.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 267 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~ 267 (508)
.++-|++.++|+.|++.|+++.++||.. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999988 34445555677885
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.0075 Score=55.93 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=33.9
Q ss_pred HHHHhhcCCEEEEEcCC-CCChhhhhcCCeeEEe---cCch-HHHH---hhcchhccC
Q 010523 312 VKHLQARNHICGMIGNG-VNDAPALKKADIGIAV---ADAT-DAAR---SAADIVLTE 361 (508)
Q Consensus 312 V~~l~~~g~~v~~vGDG-~ND~~al~~AdvGIa~---~~~~-~~a~---~aADivl~~ 361 (508)
.+.+.-....|+++||+ .||..|++.|++++++ |... +..+ ..+|+++.+
T Consensus 186 ~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 186 LNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 33343345679999999 7999999999998543 3332 3333 367888754
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.013 Score=56.09 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=72.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh---CCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL---GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
++.|++.++++.|++.|+++.++|+.+...+..+-+.+ |+... + ..++.+ .+....
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~-------------------~~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHFDT-------------------KIGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEECG-------------------GGCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEEec-------------------CCCCCC
Confidence 57899999999999999999999999887777665543 34221 0 111110 001122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecC-c-h--HHHHhhcchhccC
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD-A-T--DAARSAADIVLTE 361 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~-~-~--~~a~~aADivl~~ 361 (508)
.|+-=..+.+.+.-....|+||||..+|+.+-+.|++- |.+.. + . +.....+|.++.+
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 23322445566655567899999999999999999974 45532 1 1 1222456777643
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.0077 Score=57.42 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=35.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 267 (508)
++ +++.++|++++++|++++++| |..........+.+|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 35 899999999999999999999 77788888888888874
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.015 Score=57.59 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=70.1
Q ss_pred cCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccC-----Cchh--------hhhhcCCh
Q 010523 224 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG-----QDRD--------ESIVALPV 290 (508)
Q Consensus 224 l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~-----~~~~--------~~~~~~~~ 290 (508)
....+.++..+.++.++++|++|+|+||-....+..+|..++..-++.+..++-. .... +..+....
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccc
Confidence 3345679999999999999999999999999999999998633222212211110 0000 00000000
Q ss_pred hHHhhhcceEe-----ecChhhHHHHHHHHhhc-CCEEEEEcCC-CCChhhhhc--CCeeEEe
Q 010523 291 DELIEKADGFA-----GVFPEHKYEIVKHLQAR-NHICGMIGNG-VNDAPALKK--ADIGIAV 344 (508)
Q Consensus 291 ~~~~~~~~v~a-----~~~P~~K~~iV~~l~~~-g~~v~~vGDG-~ND~~al~~--AdvGIa~ 344 (508)
........... .+.-+.|...|+..-.. ...+++.||+ -.|.+||.. ++.|+.+
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 00000000111 12245687777765543 3468999999 479999965 4445544
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.061 Score=50.37 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=30.1
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 267 (508)
.+++-+++.++++.+++.|+++.++| |.........-..+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 34444788899999999999999999 55555555555566664
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.92 E-value=0.039 Score=53.79 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=33.7
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEc---CCcHHHHHHHHHHhCCC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAKETGRRLGMG 267 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlT---GD~~~~a~~ia~~lgi~ 267 (508)
+++-+++.+++++|++.|++++++| |..........+.+|+.
T Consensus 36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4556789999999999999999999 56666666666677774
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=93.68 E-value=0.048 Score=56.74 Aligned_cols=98 Identities=6% Similarity=-0.011 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCC------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGD------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 300 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD------~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (508)
++.+++.++++.|++.|+++.++|+. ......... .|+... + ..++.+++. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-f-d~i~~~~~~-----------------~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-F-DFLIESCQV-----------------GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-S-SEEEEHHHH-----------------TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-e-eEEEecccc-----------------CC
Confidence 46789999999999999999999996 222222211 122110 0 111111100 01
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEec
Q 010523 301 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 345 (508)
Q Consensus 301 a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~ 345 (508)
..-.|+-=..+.+.+.-....|++|||..||+.+.+.|++....-
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 222333334555666656678999999999999999999975543
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.28 E-value=0.0086 Score=55.42 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=55.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHH----HHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceE--e
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF--A 301 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~----ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--a 301 (508)
+.+++.+.++.|++.|+++.++|+.....+.. +....+.. ..+... ..+ .
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i--------~~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP--------ATNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC--------TTTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcc--------ccccch----------------hhhcCC
Confidence 46789999999999999999999986432222 22222221 000000 001 1
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 302 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 302 ~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
...|+-...+. ++.|- ++||||..+|+.+-+.|++- |.+.
T Consensus 145 KP~p~~~~~~~---~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQWL---QDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHHHH---HHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHH---HHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 12233333333 33443 99999999999999999984 5554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=92.21 E-value=0.0028 Score=57.55 Aligned_cols=83 Identities=16% Similarity=0.222 Sum_probs=56.3
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 227 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+. +.+ ++ +
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf-----------------------~~i------~~---~ 120 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWV-----------------------EQH------LG---P 120 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHH-----------------------HHH------HC---H
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCch-----------------------hhh------cC---H
Confidence 5789999999999999 9999999998876666666665540 111 11 1
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCC----hhhhh-cCCee-EEec
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVND----APALK-KADIG-IAVA 345 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND----~~al~-~AdvG-Ia~~ 345 (508)
...+.+.-....++|+||+.+| +.+-+ .|++- |.+.
T Consensus 121 ----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~ 162 (193)
T 2i7d_A 121 ----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFT 162 (193)
T ss_dssp ----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEEC
T ss_pred ----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEE
Confidence 1333344345678999999988 66655 66653 4444
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=91.87 E-value=0.096 Score=53.65 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=33.1
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc------------HHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ------------LAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~------------~~~a~~ia~~lgi~ 267 (508)
+-+++.++|+.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22366777888873
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=90.69 E-value=0.15 Score=50.90 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=37.1
Q ss_pred EEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCC
Q 010523 220 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMG 267 (508)
Q Consensus 220 G~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~ 267 (508)
|++.-.+.+=|++.++|+.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 3444455666899999999999999999999875 34566666678885
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=89.63 E-value=0.25 Score=46.82 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh--C---------CCCCCCCCccccCCchhhhhhcCChhHHhh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL--G---------MGTNMYPSSALSGQDRDESIVALPVDELIE 295 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (508)
++.|++.++++. |+++.++|..+...+..+-+.+ | +..- + ...+ +..+.
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~-~-~~~f--------------~~~~~ 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY-I-DGYF--------------DINTS 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG-C-CEEE--------------CHHHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh-c-ceEE--------------eeecc
Confidence 567899988887 9999999999988777766655 3 2100 0 0000 00000
Q ss_pred hcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec
Q 010523 296 KADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA 345 (508)
Q Consensus 296 ~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~ 345 (508)
...-.|+-=..+.+.+.-....|+||||..+|+.+-+.|++- |.+.
T Consensus 185 ----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~ 231 (253)
T 2g80_A 185 ----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLAS 231 (253)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 012223333445556655567899999999999999999974 4443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.65 E-value=0.51 Score=40.54 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=33.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~ 267 (508)
+-+++.++|+++++.|++++++||.+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34689999999999999999999997 56667777788874
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=87.87 E-value=0.014 Score=52.91 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=32.6
Q ss_pred CCCcchHHHHHHHHhC-CCcEEEEcCCcHHHHHHHHHHhCC
Q 010523 227 PPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 266 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~-Gi~v~mlTGD~~~~a~~ia~~lgi 266 (508)
++.|++.++++.|++. |+++.++|+.....+...-+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999877655555555554
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=87.06 E-value=0.36 Score=45.32 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=34.3
Q ss_pred HHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCee-EEec--CchH-HHHh---hcchhccC
Q 010523 309 YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA--DATD-AARS---AADIVLTE 361 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG-~ND~~al~~AdvG-Ia~~--~~~~-~a~~---aADivl~~ 361 (508)
..+.+.+.-....|+||||+ .||+.+.+.|++. |.+. .+.. ..+. .+|+++.+
T Consensus 190 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 190 ERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 33445554445679999999 6999999999986 4443 2221 2222 57888743
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.26 E-value=0.17 Score=46.11 Aligned_cols=91 Identities=13% Similarity=0.036 Sum_probs=62.8
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
.+||++.+.++.|++. +++++.|.-....|..+...++.... + ..++.+++.. .
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f-~~~l~rd~~~-----------------------~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-F-RARLFRESCV-----------------------F 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-E-EEEECGGGCE-----------------------E
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-E-EEEEEcccce-----------------------e
Confidence 4699999999999998 99999999999999999999998531 1 1112211110 0
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCCCChhhhhcCCeeEE
Q 010523 307 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIGIA 343 (508)
Q Consensus 307 ~K~~iV~~l~~---~g~~v~~vGDG~ND~~al~~AdvGIa 343 (508)
.|...++.++. ....|++++|..++..+-..+++-|.
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 11122233333 33579999999999988777766553
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.08 E-value=0.41 Score=42.84 Aligned_cols=90 Identities=13% Similarity=0.043 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
.+||++.+.++.+.+. +++++.|.-....|..+...++... .+ ...+.+++.. .
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f-~~~~~rd~~~-----------------------~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AF-RARLFRESCV-----------------------F 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CE-EEEECGGGSE-----------------------E
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cE-EEEEeccCce-----------------------e
Confidence 4699999999999998 9999999999999999999998853 11 1111111100 0
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCCCChhhhhcCCeeE
Q 010523 307 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADIGI 342 (508)
Q Consensus 307 ~K~~iV~~l~~---~g~~v~~vGDG~ND~~al~~AdvGI 342 (508)
.|..+++.+.. ....|+++||..++..+=..+++-|
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 11112233332 3457999999999998766666654
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=83.07 E-value=1.6 Score=41.40 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=36.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+-+.+.++|++|++.|++++++||.....+..+.+.+|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999985
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=82.18 E-value=1 Score=42.13 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=35.2
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
+.+.++|++|++.|++++++||.....+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999985
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=80.80 E-value=5.1 Score=37.58 Aligned_cols=87 Identities=16% Similarity=0.066 Sum_probs=56.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEe-ecCh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVFP 305 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-~~~P 305 (508)
.+-+.+.++|++ ++.|++++++||+....+..+.+.+|+... +....+|...... . ...++. .+++
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~--~~I~~NGa~i~~~-~---------~~~i~~~~l~~ 85 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTF--PTIAYNGAIVYLP-E---------EGVILNEKIPP 85 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCC--CEEEGGGTEEEET-T---------TEEEEECCBCH
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCC--eEEEeCCeEEECC-C---------CCEEEecCCCH
Confidence 366788999999 999999999999999999999999998431 1222223221100 0 001222 3556
Q ss_pred hhHHHHHHHHhhcCCEEEEEc
Q 010523 306 EHKYEIVKHLQARNHICGMIG 326 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vG 326 (508)
+.-.++++.+++.+..+...+
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~ 106 (268)
T 1nf2_A 86 EVAKDIIEYIKPLNVHWQAYI 106 (268)
T ss_dssp HHHHHHHHHHGGGCCCEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEEE
Confidence 666788888887654333333
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 508 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-28 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-09 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 3e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 8e-08 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 1e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-06 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 4e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 108 bits (271), Expect = 2e-28
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 275
DPP + +I+ G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 276 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 335
+ + E +A FA V P HK +IV++LQ+ + I M G+GVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 336 KKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371
KKA+IGIA+ T A++A+++VL + + I+ AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 107 bits (268), Expect = 4e-26
Identities = 27/331 (8%), Positives = 85/331 (25%), Gaps = 37/331 (11%)
Query: 64 VLCCDKTGTLTLNKLTV-----DKNLIEIFAGGVDAD-------TVVLMAARASQVENLD 111
+ + + + DK L ++ + G++++ + + ++ + +
Sbjct: 41 HIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDE 100
Query: 112 VIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQIL 169
+ + + ++ + L + + + + + ++
Sbjct: 101 IEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160
Query: 170 NLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-- 227
+ + A+ + + + + K+ + + + G I
Sbjct: 161 VSDATLFSL----KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF-KTGYIYQEIILR 215
Query: 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD------- 280
P+ + + G + + TG LG+ + D
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENM 275
Query: 281 -RDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD 339
+ P A Y + ++G+ + D + +K
Sbjct: 276 YPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335
Query: 340 I-GIAVA-------DATDAARSAADIVLTEP 362
I A + AD V+
Sbjct: 336 ATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 80.9 bits (199), Expect = 6e-19
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276
D + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 277 SGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 336
P K E VK LQA+ + +G+G+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 337 KADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371
+AD+GIAV +D A + DIVL L ++ A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 63.7 bits (154), Expect = 3e-12
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 27/148 (18%)
Query: 111 DVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKR--TALTYIDSEGKMHRVTKGS 164
D ++A++ + ++ R +V + F+ T K + D+ V KG+
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 165 PEQILNLLHNKSKIGRKV----------NAVINKFAERGLRSLAVAYQEVPEGSKESSGS 214
PE+IL+ + G+++ + G R L +P G
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 215 P-----------WQFIGLIPLFDPPIHD 231
F+GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 54.2 bits (129), Expect = 5e-09
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 293
E + + +I+G + +Y + A D
Sbjct: 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 141
Query: 294 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 353
+ K ++ L N MIG+ V D A K +D+ A + R
Sbjct: 142 ------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECRE 195
Query: 354 AADIVLTEPGLNVIITAVLISRAIFQRMRN 383
L I + + + + ++N
Sbjct: 196 QNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 54.1 bits (129), Expect = 6e-09
Identities = 26/211 (12%), Positives = 64/211 (30%), Gaps = 33/211 (15%)
Query: 39 GSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVV 98
G + + + + + +V++A + LC D + + + G +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 99 LMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMH 158
+ + + + + A R +++ L F K ++ ++
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 159 R-----VTKGSPEQILNLLHNKSKIGRKV------------NAVINKFAERGLRSLAVAY 201
KG+PE +++ + +V LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 202 QEVPEGSKESSGSPWQ----------FIGLI 222
++ P +E F+G++
Sbjct: 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 51.2 bits (122), Expect = 3e-08
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 363
++++K IG+ D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 50.8 bits (120), Expect = 8e-08
Identities = 15/68 (22%), Positives = 24/68 (35%)
Query: 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 363
+ + L + +G+G ND A K +AVA A + AD V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 364 LNVIITAV 371
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 50.2 bits (118), Expect = 1e-07
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 300 FAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVL 359
E +I K +G+G ND KKA + IA A + ADI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 360 TEPGLNVIITAV 371
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (118), Expect = 1e-07
Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 16/197 (8%)
Query: 169 LNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPP 228
++ L + V + + + A G A E + S +
Sbjct: 27 IDELAKICGVEDAV-SEMTRRAMGGAVPFKAALTERLALIQPSR--EQVQRLIAEQPPHL 83
Query: 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 288
E + R + V +I+G +I + +L + ++ L E
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGE----- 138
Query: 289 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHI--CGMIGNGVNDAPALKKADIGIAVA- 345
+ K +++K L+ + H MIG+G D A AD I
Sbjct: 139 ----YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 346 -DATDAARSAADIVLTE 361
+ A +T+
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.4 bits (114), Expect = 5e-07
Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 17/212 (8%)
Query: 171 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH 230
L I K I ++GL +++ V + +
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGINGPVFGENGGIMF 72
Query: 231 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 290
D+ +I++ S T L + + TN + ++ E + +
Sbjct: 73 DNDGSIKKFFS-----NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRK 127
Query: 291 DELIEKADGFAGVF-------PEHKYEIVKHLQARNHI----CGMIGNGVNDAPALKKAD 339
+ F + E K V L+ + +IG+ ND P +
Sbjct: 128 EAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPV 187
Query: 340 IGIAVADATDAARSAADIVLTEPGLNVIITAV 371
A+ATD ++ +D V I
Sbjct: 188 RKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 1e-06
Identities = 10/58 (17%), Positives = 18/58 (31%)
Query: 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTE 361
+ K + V ++ + G+ ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 305 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL 364
++KH N ++G+ ND L AVA+ATD+A+S A VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 365 NVIITAVL 372
+ +L
Sbjct: 269 EGAVAYLL 276
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 46.6 bits (110), Expect = 5e-06
Identities = 9/61 (14%), Positives = 29/61 (47%)
Query: 17 LVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKTGTLTLN 76
+ L + IP +P V++ +A+G++R++ + I + + ++ + + ++
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 77 K 77
Sbjct: 245 S 245
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 44.1 bits (103), Expect = 2e-05
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 307 HKYEIVKHLQARNHI----CGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
K + + + I G+G ND L+ A IG+A+ A + ++AAD V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
+ L + IG+ ND ++ A +G+AV +A + + A+ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 43.4 bits (101), Expect = 3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 307 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIV 358
K + +K L + +I +G+ +ND L+ A G+A+ +A + +S AD V
Sbjct: 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 16/84 (19%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Query: 275 ALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 334
LS + +D V +E ++ + + I + G+ ND
Sbjct: 163 ILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV-VFGDNENDLFM 221
Query: 335 LKKADIGIAVADATDAARSAADIV 358
++A + +A+ +A + + A+DIV
Sbjct: 222 FEEAGLRVAMENAIEKVKEASDIV 245
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 4e-05
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 307 HKYEIVKHLQARNHICG----MIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 362
HK + L R + IG+ NDA LK A A+ +A + + A +
Sbjct: 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDN 249
Query: 363 GLNVIITAV 371
+ +
Sbjct: 250 NHEGALNVI 258
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 36.9 bits (84), Expect = 0.003
Identities = 9/59 (15%), Positives = 17/59 (28%)
Query: 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEP 362
+ +HL + G+ ND + + G+ V +A D
Sbjct: 163 KGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSR 221
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 508 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.83 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.59 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.31 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.27 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.19 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.15 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.11 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.09 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.07 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.06 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.0 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.99 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.98 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.91 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.89 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.87 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.65 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.65 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.59 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.49 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.07 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.85 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.85 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.8 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.74 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.72 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.67 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.65 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.17 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.14 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.11 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.89 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.88 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.7 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.67 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.55 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 96.48 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.27 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.08 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.01 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.48 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.48 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.98 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.54 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.49 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 94.32 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.19 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.2 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.63 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.12 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.79 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.48 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 86.5 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.7e-33 Score=253.82 Aligned_cols=148 Identities=38% Similarity=0.531 Sum_probs=129.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
||||++++++|+.|+++||+|||+|||+..+|.++|+++||..+... ...+.+.+.+ .....+..+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD-DLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHH-HSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccc-hhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999764321 1222332222 22233445678888999999
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
+|+||..+|+.||+.|++|+|+|||.||+|||+.|||||+++++++.|+++||+++++++|..|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=5.2e-30 Score=221.89 Aligned_cols=125 Identities=34% Similarity=0.479 Sum_probs=109.9
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhh
Q 010523 217 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 296 (508)
Q Consensus 217 ~~lG~i~l~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (508)
+..+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345678999999999999999999999999999999999999999999994
Q ss_pred cceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 297 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 297 ~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.+|++++|++|..+|+.+|.. +.|+|+|||.||+|||+.|||||+++++++.++++||+++++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 479999999999999999875 68999999999999999999999999999999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=5.7e-30 Score=261.41 Aligned_cols=312 Identities=10% Similarity=-0.019 Sum_probs=209.7
Q ss_pred chHHHHhccccEEEcccccccccCceEEEeeeeec-----ccCCCChH-HHHHHHHHhc----ccCCCChHHHHHHhhhc
Q 010523 53 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI-----FAGGVDAD-TVVLMAARAS----QVENLDVIDAAIVGMLA 122 (508)
Q Consensus 53 ~~alE~l~~i~~i~~DKTGTLT~n~m~v~~~~i~~-----~~~~~~~~-~~l~~aa~~~----~~~~~~~~~~ai~~~~~ 122 (508)
..+.|.||..+++|+|||||+|.|+|++..+.-+. ...+.+.+ ++....+.+. .....++...+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 35568999999999999999999999875422100 01122222 2221111111 01122244444443322
Q ss_pred Cch----hhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHhhhcCChhHHHHHHHHHHHHHHccCeeEE
Q 010523 123 DPK----EARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLA 198 (508)
Q Consensus 123 ~~~----~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~~~~~~~~~~~~~~~~~~~~a~~Glr~l~ 198 (508)
... ..+..+.....+||++.+|+|+......++.+..+.+|+++.+ ...+....++...+++++.+|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL----HVSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT----TCSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhc----CCcHHHHHHHHhHHHHHHHHHHHHHH
Confidence 111 1234555667789999999987654433333334445666544 22333445566788899999999999
Q ss_pred EEeeecCCCCccCCCCCcEEEEEeccCCCCC--cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc
Q 010523 199 VAYQEVPEGSKESSGSPWQFIGLIPLFDPPI--HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 276 (508)
Q Consensus 199 vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r--~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~ 276 (508)
++++..+....+ ....+...|++..++++| ++++++|+.|+++|++++|+|||+..+|..+++++|+........+.
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred Hhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 998765322211 122334578999999955 59999999999999999999999999999999999996543333333
Q ss_pred cCCchhh--------hhhcCChhHHhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCC---eeEEec
Q 010523 277 SGQDRDE--------SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVA 345 (508)
Q Consensus 277 ~~~~~~~--------~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Ad---vGIa~~ 345 (508)
.+++... .....+..+.+..+..+++++|++|..+++.++..++.|+|||||.||++|+|.|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 3332211 11123344556666789999999999999999999999999999999999999999 999998
Q ss_pred -CchHHH----HhhcchhccCCChhHHHHHH
Q 010523 346 -DATDAA----RSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 346 -~~~~~a----~~aADivl~~~~l~~i~~~i 371 (508)
.+++.. +..||+|+ +++..+..++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 455443 34799999 4577776554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=3e-20 Score=173.67 Aligned_cols=136 Identities=18% Similarity=0.247 Sum_probs=106.0
Q ss_pred HHHHHHHHhcccC---------------CCChHHHHHHhhhc----CchhhhccceEEEEecCCCCCceEEEEEEec--C
Q 010523 96 TVVLMAARASQVE---------------NLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDS--E 154 (508)
Q Consensus 96 ~~l~~aa~~~~~~---------------~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~--~ 154 (508)
.++..+++|+... ..+|.+.|++.++. +....+..++.++.+||+|.+|+|+++++.. +
T Consensus 36 ~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~ 115 (214)
T d1q3ia_ 36 ALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNP 115 (214)
T ss_dssp HHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCT
T ss_pred HHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCC
Confidence 3556677775432 24889999998764 3445677889999999999999999999864 4
Q ss_pred CeEEEEEcCcHHHHHhhhc----------CChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCC-----------ccCCC
Q 010523 155 GKMHRVTKGSPEQILNLLH----------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSG 213 (508)
Q Consensus 155 g~~~~~~kGa~e~il~~~~----------~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~-----------~~~~e 213 (508)
+.+++|+|||||.|+++|+ .+++.++.+.+.+++|+.+|+|||++||+.++..+ .+..+
T Consensus 116 ~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e 195 (214)
T d1q3ia_ 116 QSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPT 195 (214)
T ss_dssp TSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCC
T ss_pred CceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhc
Confidence 5688899999999999997 45677889999999999999999999999987543 23457
Q ss_pred CCcEEEEEeccCCCCCcc
Q 010523 214 SPWQFIGLIPLFDPPIHD 231 (508)
Q Consensus 214 ~~l~~lG~i~l~D~~r~~ 231 (508)
++|+|+|++++.||||++
T Consensus 196 ~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 196 EKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp SSEEEEEEEEEESCCSCC
T ss_pred CCCEEEEEEEEEeCCCCC
Confidence 899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.59 E-value=7.5e-16 Score=145.90 Aligned_cols=97 Identities=20% Similarity=0.346 Sum_probs=80.8
Q ss_pred hccceEEEEecCCCCCceEEEEEEecCC-----eEEEEEcCcHHHHHhhhc----------CChhHHHHHHHHHHHH--H
Q 010523 128 RADIQEVHFLPFDPTGKRTALTYIDSEG-----KMHRVTKGSPEQILNLLH----------NKSKIGRKVNAVINKF--A 190 (508)
Q Consensus 128 ~~~~~~~~~~pf~~~~kr~s~~~~~~~g-----~~~~~~kGa~e~il~~~~----------~~~~~~~~~~~~~~~~--a 190 (508)
+..++.++.+||+|.+|||+++++..++ .+.+|+|||||.|+++|. .+++.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4678899999999999999999987654 357899999999999996 3456777788888876 6
Q ss_pred HccCeeEEEEeeecCCCCc----------cCCCCCcEEEEEecc
Q 010523 191 ERGLRSLAVAYQEVPEGSK----------ESSGSPWQFIGLIPL 224 (508)
Q Consensus 191 ~~Glr~l~vA~~~~~~~~~----------~~~e~~l~~lG~i~l 224 (508)
++|+|||++||+.++.... +.+|++|+|+|+++|
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999975542 234789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.31 E-value=9.5e-13 Score=121.91 Aligned_cols=148 Identities=22% Similarity=0.198 Sum_probs=103.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--Cc-cccC------Cchhh----------hhh-
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SS-ALSG------QDRDE----------SIV- 286 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~-~~~~------~~~~~----------~~~- 286 (508)
.+.+.+.++|++|++.|++++++||+....+..++..+++...... .. .... ..... ...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999988542110 00 0000 00000 000
Q ss_pred -------------------cCC---hhHHhhhcc---------eEeec--ChhhHHHHHHHHhhc----CCEEEEEcCCC
Q 010523 287 -------------------ALP---VDELIEKAD---------GFAGV--FPEHKYEIVKHLQAR----NHICGMIGNGV 329 (508)
Q Consensus 287 -------------------~~~---~~~~~~~~~---------v~a~~--~P~~K~~iV~~l~~~----g~~v~~vGDG~ 329 (508)
... ..++..+.. .+..+ ....|...++.+..+ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 111111110 11222 234677777766443 45799999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHH
Q 010523 330 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 374 (508)
Q Consensus 330 ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~ 374 (508)
||.+||+.|++||||+++++.++++||+|+..++.+++.++|.+.
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999988754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.27 E-value=4.7e-12 Score=117.68 Aligned_cols=148 Identities=19% Similarity=0.144 Sum_probs=103.7
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCC--Ccc-ccCCch----------hhh---hh--
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSA-LSGQDR----------DES---IV-- 286 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~--~~~-~~~~~~----------~~~---~~-- 286 (508)
...+.+++.+++++|++.|++++++||++...+..+...+|+...... ... +..+.. ... ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999999999998543210 000 000000 000 00
Q ss_pred ---------------------cCChhHHhh-----hcce-----EeecCh--hhHHHHHHHHhhc----CCEEEEEcCCC
Q 010523 287 ---------------------ALPVDELIE-----KADG-----FAGVFP--EHKYEIVKHLQAR----NHICGMIGNGV 329 (508)
Q Consensus 287 ---------------------~~~~~~~~~-----~~~v-----~a~~~P--~~K~~iV~~l~~~----g~~v~~vGDG~ 329 (508)
....+.+.. ...+ +....| .+|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000000100 0011 223333 3788888777553 34599999999
Q ss_pred CChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 330 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 330 ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
||.+|++.|++||||+++.+.+++.||+|+..++..+|.++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999998887
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.19 E-value=2e-11 Score=109.29 Aligned_cols=101 Identities=25% Similarity=0.270 Sum_probs=83.7
Q ss_pred HHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhhHHHHHH
Q 010523 234 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 313 (508)
Q Consensus 234 ~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 313 (508)
..|+.++..|+.+.++||+....+...++.+++.. ++... .+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~~--~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccccc--ccHHHHHH
Confidence 36999999999999999999999999999999842 23333 34444444
Q ss_pred HH----hhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhH
Q 010523 314 HL----QARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 314 ~l----~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~ 366 (508)
.+ +-....|+++||+.||.+||+.|++|+|++++.+.++..||+|+..++-.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 43 333567999999999999999999999999999999999999999988665
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=1.8e-11 Score=116.48 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=61.6
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.+.|. +|...++.+.+. ...++++|||.||.+||+.|++|++|+++.+.++..||+|+..++-+++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 598888887664 345999999999999999999999999999999999999999888899998876
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.11 E-value=2.3e-11 Score=112.66 Aligned_cols=149 Identities=15% Similarity=0.047 Sum_probs=106.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+....+......+...... ..+ ......+....|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~--~~~----~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI--DWP----HSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE--ECT----TCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee--ccc----cccccccccCCHH
Confidence 3689999999999999999999999999999999999988644322111111110000 000 0001234567899
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHHHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRM 381 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~~R~~~~~i 381 (508)
.|..+++.++..++.|+|+||+.||.+|++.||+++|++...+.+++..--...-.+|+.|...+..-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998755555544322233467998888777555554444
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=5.5e-11 Score=110.05 Aligned_cols=121 Identities=18% Similarity=0.191 Sum_probs=89.4
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCC--c--cccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS--S--ALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
++|++.++|+.|++.|++++++||.....+..+++.+|+.....-. . ..+|.... . .......
T Consensus 83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-----~--------~~~~p~~ 149 (217)
T d1nnla_ 83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-----F--------DETQPTA 149 (217)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-----E--------CTTSGGG
T ss_pred cCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-----c--------eeeeeee
Confidence 6899999999999999999999999999999999999996321000 0 00010000 0 0001124
Q ss_pred ChhhHHHHHHHHhhc--CCEEEEEcCCCCChhhhhcCCeeEEecC--chHHHHhhcchhccC
Q 010523 304 FPEHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVAD--ATDAARSAADIVLTE 361 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~--g~~v~~vGDG~ND~~al~~AdvGIa~~~--~~~~a~~aADivl~~ 361 (508)
.+..|..+++.++.+ ...|+++|||.||.+|++.||++||++. .....++.||+++.+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 467799999998764 3469999999999999999999999973 445667789998854
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=1.1e-10 Score=111.74 Aligned_cols=71 Identities=21% Similarity=0.269 Sum_probs=61.8
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.++|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||+++++.+++.||+|+..++-++|.++|+
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34554 798888888654 346999999999999999999999999999999999999999888999998886
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=3.3e-11 Score=114.60 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=62.5
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 301 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
..++|. .|...++.|.++ ...|+++|||.||.+||+.|+.|+||+++.+.+|+.||+|+..++-+++.++|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 345564 599888888664 245999999999999999999999999999999999999999999999988886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.00 E-value=5.5e-11 Score=112.77 Aligned_cols=73 Identities=26% Similarity=0.283 Sum_probs=62.5
Q ss_pred eecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 301 AGVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 301 a~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
..+.|. .|...++.|.++ ...++++|||.||.+||+.|+.||||++|.+.+++.||+|...++-+++.++|+.
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344454 688888777653 4579999999999999999999999999999999999999998889999998863
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.99 E-value=5.9e-11 Score=107.63 Aligned_cols=136 Identities=21% Similarity=0.189 Sum_probs=93.1
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++.+++.+.++.++..|..+.++||.....+....+..+........... ......... . .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~----~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIV--KDGKLTGDV---E----GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE--ETTEEEEEE---E----CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcc--ccccccccc---c----cccccccccc
Confidence 367789999999999999999999999999999999988874321100000 000000000 0 0000001112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
.....+.+.++.....++++|||.||.+|++.|++|||| ++.+..++.||+|+..+++++|+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 222333444444566799999999999999999999999 88889999999999999999987654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.98 E-value=1.2e-09 Score=98.56 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=92.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+..++....++.+ +.+.++.++|+.............++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchh
Confidence 3455666666665 5789999999999999999999888753211111000000 01123445566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~~ 373 (508)
.+...++.++.....|+|+|||.||.+||+.||+||||+...+..++++|++.. .++..+..++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677888889999999999999999999999999999995556666677777764 678888876653
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.91 E-value=6.7e-11 Score=122.32 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=70.4
Q ss_pred ccHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHhCCCeecCchHHHHhccccEEEcccc--cccccCceEEEe
Q 010523 7 REYRTGLNNLLVLLIGGIPIAMPTVLSVTMAIGSKRLSLQGVITKRMSAIVDMAGMDVLCCDKT--GTLTLNKLTVDK 82 (508)
Q Consensus 7 ~~~~~~i~~~l~lli~~iP~alp~~~~~~~~~~~~~l~~~gilvk~~~alE~l~~i~~i~~DKT--GTLT~n~m~v~~ 82 (508)
.++.+.+..++++.++++|++||++++++++.|+++|+|+|++||++.++|++|+..++|+||| +|||.|.+.+..
T Consensus 175 ~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 175 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHH
Confidence 4566778899999999999999999999999999999999999999999999999999999998 999999877643
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.89 E-value=1.3e-09 Score=103.54 Aligned_cols=66 Identities=29% Similarity=0.322 Sum_probs=52.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCCh-hHHHHHHH
Q 010523 307 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGL-NVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l-~~i~~~i~ 372 (508)
.|...++.+.+. ...|+++|||.||.+||+.|++|++|+++.+.+++.||+|+..++- .++..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666655443 3579999999999999999999999999999999999999976544 44665554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.87 E-value=1e-09 Score=104.13 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=61.3
Q ss_pred ecChh--hHHHHHHHHhhc----CCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~----g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
.++|. .|...++.+.+. ...|+++|||.||.+||+.|++||+|+++++.+++.||+|+..++-+++.++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45564 688888777553 345899999999999999999999999999999999999999999999998875
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.65 E-value=1.2e-08 Score=94.36 Aligned_cols=44 Identities=11% Similarity=0.053 Sum_probs=39.0
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 268 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~ 268 (508)
.+...+.+.++|++|+++|++++++||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445778999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.65 E-value=1.6e-08 Score=94.16 Aligned_cols=69 Identities=17% Similarity=0.123 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch-------hccCCChhHHHHHHHH
Q 010523 305 PEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-------VLTEPGLNVIITAVLI 373 (508)
Q Consensus 305 P~~K~~iV~~l~~~-g---~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi-------vl~~~~l~~i~~~i~~ 373 (508)
..+|...++.+.+. | ..|+++|||.||.+||+.|+.|++|+++.+.+++.||. +...++..+|.++|++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 44698888888765 2 45999999999999999999999999999999999994 5556678888888763
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.59 E-value=8.5e-08 Score=81.33 Aligned_cols=122 Identities=21% Similarity=0.287 Sum_probs=90.7
Q ss_pred cCCCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhh---hccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcH
Q 010523 89 AGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA---RADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSP 165 (508)
Q Consensus 89 ~~~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~---~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~ 165 (508)
..|.+.++++.+|+.++..++| |+++||+.++.+.... ...+.....+||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~SeH-PlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADET-PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 4689999999999999988775 9999999987532211 1233445566777665544432 355 56778999
Q ss_pred HHHHhhhcC-ChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEeccCCCCC
Q 010523 166 EQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPI 229 (508)
Q Consensus 166 e~il~~~~~-~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~r 229 (508)
..+..++.. ...+...+.+.+++++.+|.+++.|+.+. +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 887665431 22355677888999999999999999876 9999999999987
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.49 E-value=4.8e-07 Score=82.40 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=38.0
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCC
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 267 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~ 267 (508)
.+.+.+.++|++|++.|+.++++||++...+..+.+.+++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36678999999999999999999999999999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=7e-07 Score=81.48 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=46.7
Q ss_pred hHHHHHHHHhhc-CCEEEEEcC----CCCChhhhhcCC-eeEEecCchHHHHhhcchhc
Q 010523 307 HKYEIVKHLQAR-NHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIVL 359 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aADivl 359 (508)
.|...++.|.+. ...|+++|| |.||.+||+.|+ .|+||+++.+.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 588888888654 568999999 569999999997 79999999999999999987
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.85 E-value=2.4e-06 Score=77.32 Aligned_cols=65 Identities=9% Similarity=0.156 Sum_probs=45.7
Q ss_pred ecChh--hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcchhccCCChhHHHHHH
Q 010523 302 GVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 302 ~~~P~--~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
.+.|. +|...++.|..+. .++++||+.||.+||+.++.|++|+.|. ++.+|++++.+ ...+...+
T Consensus 152 di~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS--HHHHHHHH
T ss_pred EEecCCCCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC--HHHHHHHH
Confidence 44444 6999999998764 5789999999999999996666655332 14578888854 44444433
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.85 E-value=6.4e-06 Score=75.00 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=80.2
Q ss_pred CCcchHHHHHHHHhCC-CcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~G-i~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+-|++.++++.|++.| +++.++|+.....+....+.+|+..-. . .+..+++.. ...-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~-----------------~~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL-----------------DRNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS-----------------SGGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-ccccccccc-----------------cccchhH
Confidence 3579999999999987 899999999999999999999985421 1 111111100 0001111
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCCCCChhhhhcCCe---eEEecC--chHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQA---RNHICGMIGNGVNDAPALKKADI---GIAVAD--ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~---~g~~v~~vGDG~ND~~al~~Adv---GIa~~~--~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
--...++.+.. ....|+||||+.+|..|-+.|++ +|+.|. ..+..+..+|+++ ++++.+.+.|.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11223333322 24579999999999999999995 444443 2333445689998 45777776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.80 E-value=1.6e-05 Score=73.58 Aligned_cols=126 Identities=14% Similarity=0.176 Sum_probs=87.2
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.++++.|++.|+++.++||.+...+..+-+.+|+..-. ...++.+++. ......|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~-----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV-----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-cccccccccc-----------------cccccChH
Confidence 46899999999999999999999999999999999998885422 1222222111 11233455
Q ss_pred hHHHHHHHHhhc-CCEEEEEcCCCCChhhhhcCCe-eEEecCch-------H--------------------HHHhhcch
Q 010523 307 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI-GIAVADAT-------D--------------------AARSAADI 357 (508)
Q Consensus 307 ~K~~iV~~l~~~-g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~-------~--------------------~a~~aADi 357 (508)
.=...++.+.-. ...|+||||..+|+.+-+.|++ .|++..|. + ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 555666666653 4679999999999999999996 34443221 0 11123899
Q ss_pred hccCCChhHHHHHHH
Q 010523 358 VLTEPGLNVIITAVL 372 (508)
Q Consensus 358 vl~~~~l~~i~~~i~ 372 (508)
|+. ++..+..+|.
T Consensus 241 vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 241 TIE--TMQELESVME 253 (257)
T ss_dssp EES--SGGGHHHHHH
T ss_pred EEC--CHHHHHHHHH
Confidence 994 4878777765
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.74 E-value=2e-05 Score=74.86 Aligned_cols=132 Identities=10% Similarity=0.068 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCC---CCC-ccccCCchhhhhhcCChhHHhhhcceEee
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM---YPS-SALSGQDRDESIVALPVDELIEKADGFAG 302 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 302 (508)
++|+|+++.++.|++.|+++.++||.-.....++.+++|+.... +.. ..+.++........ --
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~-------------~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------------EL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECS-------------SC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccC-------------Cc
Confidence 47999999999999999999999999999999999999986431 111 11111110000000 00
Q ss_pred cChhhHHHHH----HHHhh--cCCEEEEEcCCCCChhhhhc---CCeeEEec--Cc--h---HHHHhhcchhccCCChhH
Q 010523 303 VFPEHKYEIV----KHLQA--RNHICGMIGNGVNDAPALKK---ADIGIAVA--DA--T---DAARSAADIVLTEPGLNV 366 (508)
Q Consensus 303 ~~P~~K~~iV----~~l~~--~g~~v~~vGDG~ND~~al~~---AdvGIa~~--~~--~---~~a~~aADivl~~~~l~~ 366 (508)
.....|...+ ...+. ....+.++|||+||..|.+. ++..+++| +. . +.-.++-|||+.++.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 1122333222 22222 34679999999999999874 34444444 21 1 223367799977765444
Q ss_pred HHHHH
Q 010523 367 IITAV 371 (508)
Q Consensus 367 i~~~i 371 (508)
++..|
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.72 E-value=9e-05 Score=59.90 Aligned_cols=104 Identities=15% Similarity=0.189 Sum_probs=74.4
Q ss_pred CCChHHHHHHHHHhcccCCCChHHHHHHhhhcCchhhhccceEEEEecCCCCCceEEEEEEecCCeEEEEEcCcHHHHHh
Q 010523 91 GVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILN 170 (508)
Q Consensus 91 ~~~~~~~l~~aa~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~~~~kr~s~~~~~~~g~~~~~~kGa~e~il~ 170 (508)
+.+.++++.+++..+..++| |+++|++.++.+........+.+...|-.. + .|+ .+..|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~H-PlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSEH-PIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCCS-HHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCCC-chHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHh
Confidence 45889999999999988776 999999998865443223333444444221 1 011 255699999865
Q ss_pred hhcCChhHHHHHHHHHHHHHHccCeeEEEEeeecCCCCccCCCCCcEEEEEecc
Q 010523 171 LLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPL 224 (508)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~a~~Glr~l~vA~~~~~~~~~~~~e~~l~~lG~i~l 224 (508)
.. ..+.+.+...++.+..+|..+++++.++ +++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 42 2355667788999999999999999987 89999876
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.67 E-value=2e-05 Score=70.86 Aligned_cols=118 Identities=17% Similarity=0.222 Sum_probs=81.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+..- + ..++.+++.. .+...|+-
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~~-----------------~~Kp~~~~ 149 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKLP-----------------YSKPHPQV 149 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTSS-----------------CCTTSTHH
T ss_pred ccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-cccccccccc-----------------cchhhHHH
Confidence 468999999999999999999999999999999999999532 1 1222221110 12233333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc---hHHHHhhcchhccCCChhH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA---TDAARSAADIVLTEPGLNV 366 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~---~~~a~~aADivl~~~~l~~ 366 (508)
=..+++.+.-....++||||+.+|..+-+.+++. |++... .+.....||+++.+ +..
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~--l~e 210 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTE 210 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGG
T ss_pred HHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC--hhh
Confidence 4556666766677899999999999999999974 444321 22223457777644 553
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.65 E-value=8.6e-06 Score=73.43 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
.+.|++.+.++.|++.|+++.++||.....+..+.+.+|+... +.. ++..... ......|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~-f~~-~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-FSE-MLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-CSE-EECTTTS-----------------SSCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh-ccc-ccccccc-----------------ccccccch
Confidence 3579999999999999999999999999999999999998532 111 1111100 01122344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC----chHHHHhhcchhccCCChhHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 371 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~----~~~~a~~aADivl~~~~l~~i~~~i 371 (508)
--..+.+.++-....++||||..+|..+-+.|++ .|.+.. ..+.....+|+++. ++..++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 4445556666667789999999999999999997 455542 12234455788874 477665543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.17 E-value=7.8e-05 Score=66.37 Aligned_cols=120 Identities=11% Similarity=0.071 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+.... ..++.+.. .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS-------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccccc-------------------ccccccc
Confidence 45689999999998775 89999999999999999999985321 11111000 1122344
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec---C-chHHHHhhcchhccCCChhHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA---D-ATDAARSAADIVLTEPGLNVIITA 370 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~---~-~~~~a~~aADivl~~~~l~~i~~~ 370 (508)
-...+++.++-....++||||+.||..|-+.|++ .|++. . ..+.....+|+++.+ +..+...
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 3344555555556789999999999999999997 55553 2 233333458898744 7666543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.14 E-value=0.00041 Score=62.57 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.|++.++++.|+ .|+++.++|+..........+.+|+... +... +..++. ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd~i-~~s~~~-----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FDSI-TTSEEA-----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CSEE-EEHHHH-----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cccc-cccccc-----------------cccchhhH
Confidence 46789999999996 5899999999999888999999998532 1111 110000 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-CCChhhhhcCCee-EEec--CchHHHHhhcchhccCCChhHHHHHHH
Q 010523 307 HKYEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVA--DATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG-~ND~~al~~AdvG-Ia~~--~~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
-=..+++.+.-....|+||||. .+|+.+-+.|++. |.+. .........+|+++.+ ++.++.+|+
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 2234455555456679999997 6899999999984 3342 2333344577998854 888887775
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00044 Score=60.46 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=80.6
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHH--------H-------HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLA--------I-------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~--------~-------a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+-|++.++++.|+++|+++.++|..... . ........|+... ...+.....+... .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~~~------~ 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQGSV------E 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTCSS------G
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccccc------c
Confidence 3489999999999999999999987531 0 1111122222110 0011100000000 0
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee--EEecC---chHHHHhhcchhccCCChhHH
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD---ATDAARSAADIVLTEPGLNVI 367 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG--Ia~~~---~~~~a~~aADivl~~~~l~~i 367 (508)
.......+..-.|.--..+++.++-....++||||..+|..|-+.|+++ +.+.. ..+.....||+|+ +++..+
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 0001112334455555667777776777899999999999999999985 44432 2345666799998 558888
Q ss_pred HHHHH
Q 010523 368 ITAVL 372 (508)
Q Consensus 368 ~~~i~ 372 (508)
+++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87775
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.97 E-value=0.0003 Score=60.43 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCc-HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC-
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF- 304 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~-~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~- 304 (508)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++.... . .+...-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--I------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--S------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--e------------------------eeecccCC
Confidence 468999999999999999999999755 45566666666663210 0 0122222
Q ss_pred -hhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecC
Q 010523 305 -PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD 346 (508)
Q Consensus 305 -P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~ 346 (508)
|+.-..+.+.+.-....++||||..+|..+-++|++ .|.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 333344555555566789999999999999999998 455543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.89 E-value=0.00019 Score=63.47 Aligned_cols=100 Identities=17% Similarity=0.129 Sum_probs=69.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++.|+++.++|+... .+..+-+.+|+.... ..++..++ .....-.|+-
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~-----------------~~~~Kp~~~~ 142 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQS-----------------GFVRKPSPEA 142 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGG-----------------CCCCTTSSHH
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cccccccc-----------------ccccchhHHH
Confidence 568999999999999999999998654 456677888985321 11111100 0112234444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEecCc
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA 347 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~~~ 347 (508)
-..+++.+.-....|+||||+.+|..+-+.+++. |++..+
T Consensus 143 ~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 143 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 4556666666677899999999999999999984 555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0007 Score=60.95 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=78.0
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
-.+.|++.+++++|++.|+++.++|+............+|+..-. +......+. .......|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~-----------------~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-----------------KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-----------------GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc-----------------ccccCCCc
Confidence 346899999999999999999999999999888888888874321 110000000 01122333
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe---cC-chHHHHhhcchhcc
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV---AD-ATDAARSAADIVLT 360 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~---~~-~~~~a~~aADivl~ 360 (508)
+-=....+.+.-....|+||||..+|+.+-+.|++- |.+ ++ ........++.++.
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 333455666666677899999999999999999985 444 22 22233345566664
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.70 E-value=0.0013 Score=57.29 Aligned_cols=109 Identities=12% Similarity=0.067 Sum_probs=69.5
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++.+++.+.++.|++.|+++.++|+-.... ...-+.+|+... + ..++.+++. ......|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~-f-d~i~~~~~~-----------------~~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAY-F-TEVVTSSSG-----------------FKRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGG-E-EEEECGGGC-----------------CCCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccc-c-ccccccccc-----------------cccCCCHH
Confidence 456899999999999999999999876654 456677887421 1 111111100 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEecCchHHHHhhcch
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI 357 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~~~~~~~a~~aADi 357 (508)
--..+.+.++- ..+++|||..+|..+-+.|++-...-......++..||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33344444432 35899999999999999999864333455666666664
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.67 E-value=9.5e-05 Score=65.82 Aligned_cols=119 Identities=12% Similarity=0.089 Sum_probs=77.2
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|+ .++++.++|+.....+..+.+.+|+.... ..++.+++. ......|+-
T Consensus 83 ~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSHH
T ss_pred cccchhhhhhhhc-ccccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhhhh
Confidence 5689999999997 47999999999999999999988874311 111111000 011223444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCeeEEe---cCchHHHHhhcchhccCCChhHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV---ADATDAARSAADIVLTEPGLNVII 368 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvGIa~---~~~~~~a~~aADivl~~~~l~~i~ 368 (508)
-..+++.++-....|+||||+.+|..+-+.|++.... |..+....+.+|.++. ++..|+
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES--SGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC--CHHHHH
Confidence 4555555555557799999999999999999986443 2233333456777763 355443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.55 E-value=0.0016 Score=58.99 Aligned_cols=123 Identities=10% Similarity=0.114 Sum_probs=80.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.|++.++++.|++ |+++.++|+.+.......-+.+|+... +. .++.+.+. ......|+-
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~-----------------~~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-FD-AIVIGGEQ-----------------KEEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-CS-EEEEGGGS-----------------SSCTTCHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-cc-cccccccc-----------------ccchhhhhh
Confidence 57999999999985 899999999999988998999998532 11 11111110 011222222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCee-EEecC----chHHHHhhcchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVAD----ATDAARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~-ND~~al~~AdvG-Ia~~~----~~~~a~~aADivl~~~~l~~i~~~i~ 372 (508)
=..+.+.+.-....|+||||.. +|+.+-+.|++. +.+-+ ........+|+++. ++..+..+|+
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 2344555555556799999985 899999999985 54321 11222344688874 4888877776
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.48 E-value=0.00058 Score=69.10 Aligned_cols=76 Identities=14% Similarity=0.071 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccHHHHHHHHH-hhcccccccchhHHHHHHHHhhcccccCCCC
Q 010523 373 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLE--LNFLFTLDTVIAILQ-TAFTSKKDFGKEERELLWAHAQRTLHGLQPP 448 (508)
Q Consensus 373 ~~R~~~~~i~~~~~~~~~~~~~~i~~~~~~--~~~~~pl~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 448 (508)
.||.++.|++|++.|.+..+...+...+.. +....|++++|+||. ......|.++++.+++..+.|+|+|+..+.+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~ 305 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCC
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCcc
Confidence 599999999999999998766555444332 336789999999954 4555789999999999999999999866544
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.27 E-value=0.0024 Score=57.21 Aligned_cols=141 Identities=16% Similarity=0.219 Sum_probs=90.4
Q ss_pred CcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccC-----Cchhhh-------hhcCChhH----
Q 010523 229 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSG-----QDRDES-------IVALPVDE---- 292 (508)
Q Consensus 229 r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~---- 292 (508)
=||+.++++.+++. ...+++|---..-..+++..+|++.+.+...+-.+ .+.++. +.....++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHH
Confidence 57999999999877 67888888888889999999999744221111000 000110 11111111
Q ss_pred ------------HhhhcceEeecChhhHHHHHHHHhhc-C-CEEEEEcCCCCChhhhhcCCe--eEEec-CchHHHHhhc
Q 010523 293 ------------LIEKADGFAGVFPEHKYEIVKHLQAR-N-HICGMIGNGVNDAPALKKADI--GIAVA-DATDAARSAA 355 (508)
Q Consensus 293 ------------~~~~~~v~a~~~P~~K~~iV~~l~~~-g-~~v~~vGDG~ND~~al~~Adv--GIa~~-~~~~~a~~aA 355 (508)
+++..... --..|..+++..-.. + ...++|||++.|..||+.|.= |+|++ ||.+-+-..|
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 12222111 124566555443322 1 234899999999999998843 78877 8888888899
Q ss_pred chhccCCChhHHHHHHHH
Q 010523 356 DIVLTEPGLNVIITAVLI 373 (508)
Q Consensus 356 Divl~~~~l~~i~~~i~~ 373 (508)
|+.+.+++...+...+..
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred ceEEeccchhHHHHHHHH
Confidence 999999998888777764
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.0026 Score=56.36 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=65.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcH----HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQL----AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~----~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.+++.+.++.+++.|++|+.+||+.. .++..+-+.+|++........+.++. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 467999999999999999999999764 56677777789865433222232221 1
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEe
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 344 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~ 344 (508)
....|...|+. ..+++++||..+|..+-.+|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 12335555543 4589999999999999999996 6765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.01 E-value=0.0027 Score=56.25 Aligned_cols=101 Identities=7% Similarity=0.018 Sum_probs=67.8
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecCh
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 305 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P 305 (508)
.++-|++.+.++.|++.|+++.++|+... +...-+..|+... ++. ++.+++. ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~-f~~-i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY-FDA-IADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG-CSE-ECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc-ccc-ccccccc-----------------cccccCh
Confidence 34678999999999999999999999765 4567777887432 111 1111111 1122233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCc
Q 010523 306 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADA 347 (508)
Q Consensus 306 ~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~ 347 (508)
+-=....+.++-....|+||||..+|+.+-+.|++ .|+++.+
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence 33234555555556779999999999999999997 5666543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.93 E-value=0.00095 Score=55.75 Aligned_cols=109 Identities=14% Similarity=0.086 Sum_probs=60.9
Q ss_pred CCCCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecC
Q 010523 225 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 304 (508)
Q Consensus 225 ~D~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~ 304 (508)
+|++.|++.+.++.|++.|++|.++||.+......+.+.++.... ..................--.+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~d 102 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRK-----------WVEDIAGVPLVMQCQREQGDTRKD 102 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHH-----------HHHHTTCCCCSEEEECCTTCCSCH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhh-----------hhhhcCCCcEEEeecccccccCCc
Confidence 578999999999999999999999999863211111111000000 000000000000000000001222
Q ss_pred hhhHHHHHHHHhhcCC-EEEEEcCCCCChhhhhcCCee-EEe
Q 010523 305 PEHKYEIVKHLQARNH-ICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 305 P~~K~~iV~~l~~~g~-~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
+.-|..+.+.+...++ .++|+||...|+.|.+.+++- |.+
T Consensus 103 ~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V 144 (149)
T d1ltqa1 103 DVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 144 (149)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred hHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence 4557777777666544 568899999999999999983 444
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.48 E-value=0.0041 Score=54.88 Aligned_cols=121 Identities=11% Similarity=0.095 Sum_probs=80.9
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+. ......|+-
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~-----------------~~~KP~p~~ 154 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV-----------------QVYKPDNRV 154 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG-----------------TCCTTSHHH
T ss_pred ccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeee-----------------eccccHHHH
Confidence 4679999999999999999999999998888888887774211 111111100 012223333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEec---CchHHHHhhcchhccCCChhHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVA---DATDAARSAADIVLTEPGLNVIIT 369 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~~---~~~~~a~~aADivl~~~~l~~i~~ 369 (508)
=..+++.+.-....|+||||..+|+.+-+.|++- |.+. ...+.....+|+++. ++..+++
T Consensus 155 ~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 155 YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 3455666666667899999999999999999985 4442 122223345788884 4777654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.48 E-value=0.0064 Score=53.53 Aligned_cols=107 Identities=9% Similarity=0.045 Sum_probs=69.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~----~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.+++.+.+++|++.|+++.++|+-. ...........|+..- +. .++.+.+ .....-
T Consensus 98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-fd-~i~~s~~-----------------~~~~KP 158 (222)
T d1cr6a1 98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-FD-FLIESCQ-----------------VGMIKP 158 (222)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-CS-EEEEHHH-----------------HSCCTT
T ss_pred CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-hc-eeeehhh-----------------ccCCCC
Confidence 57899999999999999999999632 2333444445554211 00 0110000 011223
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCchHHHHh
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDAARS 353 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~~~a~~ 353 (508)
.|+--...++.++-....|+||||..+|+.+-+.|++ +|.+.++.+...+
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 4555556677777777889999999999999999998 6666655544443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.98 E-value=0.01 Score=52.35 Aligned_cols=124 Identities=10% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChhh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 307 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 307 (508)
+.+++.+.+++++ .+..++|+-....+..+-..+|+.... ...+..++... ...+...|+-
T Consensus 86 ~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~---------------~~~~KP~~~~ 146 (222)
T d2fdra1 86 IIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG---------------ADRVKPKPDI 146 (222)
T ss_dssp BCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC---------------TTCCTTSSHH
T ss_pred hhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeeccccccc---------------ccccccCHHH
Confidence 5678887777654 566799999999999999999985321 11111110000 0011122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCch-------H-HHHhhcchhccCCChhHHHHHHH
Q 010523 308 KYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADAT-------D-AARSAADIVLTEPGLNVIITAVL 372 (508)
Q Consensus 308 K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~-------~-~a~~aADivl~~~~l~~i~~~i~ 372 (508)
=....+.+.-....|+||||..+|+.+-+.|++ .|++..+. + ....-+|+++.+ +..+..+|.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 234555555556789999999999999999997 35554321 1 122348999854 777766554
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.54 E-value=0.035 Score=49.31 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=65.1
Q ss_pred CCCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 227 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 227 ~~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
++-+++.+++++|+ |+.+.++|..+...+...-+..|+.... ..++.+++. ....-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~-----------------~~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK-----------------RVFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG-----------------TCCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--ccccccccc-----------------cccCccHH
Confidence 45678999998885 6788999999998888888888874321 112221111 01222333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCee-EEe
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAV 344 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~AdvG-Ia~ 344 (508)
-=..+++.+.-+...|+||||..+|+.+-+.|++- |.+
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v 190 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV 190 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEE
Confidence 22445566665666799999999999999999973 444
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.49 E-value=0.013 Score=52.04 Aligned_cols=109 Identities=17% Similarity=0.084 Sum_probs=59.8
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc--------HHHH-------HHHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ--------LAIA-------KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a-------~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+-|++.++|+.|++.|+++.++|.-. .... .+.-+..|+....+ ........ ....
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~~~~~~~-~~~~----- 119 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV---LACAYHEA-GVGP----- 119 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE---EEECCCTT-CCST-----
T ss_pred ecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceE---EEeccccc-cccc-----
Confidence 56899999999999999999999522 1111 11222333321100 00000000 0000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
...+...+..-.|.--....+.+.-....+.||||..+|..+-+.|++ +|.+.
T Consensus 120 ~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 120 LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 000000011223444455566666556779999999999999999998 56654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.32 E-value=0.0086 Score=53.13 Aligned_cols=51 Identities=18% Similarity=0.367 Sum_probs=35.1
Q ss_pred hHHHHHHHHhh-cCCEEEEEcC----CCCChhhhhcCC-eeEEecCchHHHHhhcchh
Q 010523 307 HKYEIVKHLQA-RNHICGMIGN----GVNDAPALKKAD-IGIAVADATDAARSAADIV 358 (508)
Q Consensus 307 ~K~~iV~~l~~-~g~~v~~vGD----G~ND~~al~~Ad-vGIa~~~~~~~a~~aADiv 358 (508)
+|...++.|.. ....|+++|| |.||.+||+.|+ .|+++++. +..+..++-+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~-~~~~~~~~~l 241 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICELL 241 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH-HHHHHHHHHH
Confidence 45555555543 3578999999 889999999998 68888775 4455566544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.19 E-value=0.0062 Score=55.47 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=27.7
Q ss_pred cchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHH
Q 010523 230 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 263 (508)
Q Consensus 230 ~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~ 263 (508)
+++.++|++|++.|++++++|+....+...++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 7889999999999999999998775555555544
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.021 Score=49.62 Aligned_cols=104 Identities=11% Similarity=0.033 Sum_probs=62.0
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHH----HHHHHHhCCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeec
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIA----KETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 303 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a----~~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~ 303 (508)
+.+++.+.+..|++.|++++++|+...... .......++... + ..++.+.+ .....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~~-----------------~~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESCQ-----------------VGMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHHH-----------------HTCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEeccc-----------------cccchh
Confidence 578999999999999999999997543222 111122222110 0 01111000 001122
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCchHH
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADATDA 350 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~~~ 350 (508)
.|+-=..+++.+.-....++||||...|+.+-+++++ +|.+.++.+.
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~ 208 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcchh
Confidence 2333344555555555779999999999999999999 6777655443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.63 E-value=0.1 Score=47.07 Aligned_cols=61 Identities=23% Similarity=0.300 Sum_probs=42.1
Q ss_pred HHHHHHHhhcCCEEEEEcCCC-CChhhhhcCCe-eEEecCc---hHHHHh---hcchhccCCChhHHHHHH
Q 010523 309 YEIVKHLQARNHICGMIGNGV-NDAPALKKADI-GIAVADA---TDAARS---AADIVLTEPGLNVIITAV 371 (508)
Q Consensus 309 ~~iV~~l~~~g~~v~~vGDG~-ND~~al~~Adv-GIa~~~~---~~~a~~---aADivl~~~~l~~i~~~i 371 (508)
....+.+.-....++||||.. +|+.+-+.|++ +|.+..| .+.... ..|+++. ++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 445555555667899999995 69999999997 6666422 222222 2488884 588888766
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.12 E-value=0.018 Score=48.85 Aligned_cols=102 Identities=11% Similarity=0.017 Sum_probs=55.3
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCc--------HHHHH-------HHHHHhCCCCCCCCCccccCCchhhhhhcCChhH
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQ--------LAIAK-------ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 292 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~--------~~~a~-------~ia~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (508)
+-|++.++++.|++.|++++++|.-. ..... ..-...|+... ...+......+
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~---~i~~~~~~~~~--------- 98 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD---EVLICPHLPAD--------- 98 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE---EEEEECCCGGG---------
T ss_pred ECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc---eeeeccccccc---------
Confidence 45899999999999999999999743 11111 11222233110 00000000000
Q ss_pred HhhhcceEeecChhhHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEec
Q 010523 293 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVA 345 (508)
Q Consensus 293 ~~~~~~v~a~~~P~~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~ 345 (508)
-..+....|.-=.++++.+.-....++||||...|..|-+.|++ +|.+.
T Consensus 99 ----~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 99 ----ECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp ----CCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ----cccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 00011223333334444455455679999999999999999998 45554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.79 E-value=0.049 Score=49.07 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=30.2
Q ss_pred CCCCcchHHHHHHHHhCCCcEEEEcCCc---HHHHHHHHHHhCCC
Q 010523 226 DPPIHDSAETIRRALSLGLGVKMITGDQ---LAIAKETGRRLGMG 267 (508)
Q Consensus 226 D~~r~~~~~~I~~l~~~Gi~v~mlTGD~---~~~a~~ia~~lgi~ 267 (508)
+.+=+++.++|+.|+++|++++++|+.. .....+.-+.+|+.
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3334789999999999999999999544 44444444556764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.48 E-value=0.18 Score=45.12 Aligned_cols=42 Identities=24% Similarity=0.214 Sum_probs=32.3
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCCC-ChhhhhcCCe-eEEec
Q 010523 304 FPEHKYEIVKHLQARNHICGMIGNGVN-DAPALKKADI-GIAVA 345 (508)
Q Consensus 304 ~P~~K~~iV~~l~~~g~~v~~vGDG~N-D~~al~~Adv-GIa~~ 345 (508)
+|+--..+.+.++-....|+||||..+ |..+-++|++ +|.+.
T Consensus 182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 344445566666666778999999975 9999999998 77774
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=86.50 E-value=0.015 Score=49.36 Aligned_cols=102 Identities=8% Similarity=0.004 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCcEEEEcCCcHHHHHHHHHHh-CCCCCCCCCccccCCchhhhhhcCChhHHhhhcceEeecChh
Q 010523 228 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-GMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 306 (508)
Q Consensus 228 ~r~~~~~~I~~l~~~Gi~v~mlTGD~~~~a~~ia~~l-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 306 (508)
+.+++.+.+..++..|+.+.++|+-+...+...-... |+... + ..++.+ .........|+
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-d~v~~s-----------------~~~~~~Kp~~~ 145 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLS-----------------QDLGMRKPEAR 145 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEH-----------------HHHTCCTTCHH
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh-c-cceeec-----------------ccccccccchH
Confidence 5789999999999999999999875532211110000 11000 0 000000 00001112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCCCChhhhhcCCe-eEEecCch
Q 010523 307 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVADAT 348 (508)
Q Consensus 307 ~K~~iV~~l~~~g~~v~~vGDG~ND~~al~~Adv-GIa~~~~~ 348 (508)
-=..+.+.++-....|+||||..+|..+-+.|++ +|.+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 146 IYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 2234455555556789999999999999999998 67776543
|