Citrus Sinensis ID: 010541

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQAS
cccccccccccccccHHHHHHHHHHccccccEEEEEcccccHHHcHHHHHHHHHHccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccEEEEEEccccHHcccccccEEEEEcccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHcHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcc
cccEEEEccccccccHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEcccccccccccccccccccEEEEEccccccccEEcccccHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEccEEEEcccccEEEEEEEccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEccHHHccccccHHHHHHHHHHHHHHHHHHHHHccc
mltaaicgdvfasppvdsilaGIHAVTGPMGCLLIVTNytgdrlnfGLAAeqaksegyKVEIVIVgddcalppprgiagrrglAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVctlpgqvtsdrlgpgkmelglgihgepgaavadlqpVDVVVSHVLKQILStetnyvpitrgNRVVLMINGLGATPVMELMIAAGkavpnlqlehglAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLdattkaphwpvgvdgnrppakipvpmppshsmksdeslgrplqlsqqghVLEVTIEAAAEAVVNLRDRLNewdskvgdgdcgstmyRGATAIledkkkyyplndaaETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKassksgitskqfskyggatagYRTMLDALIPAAAVLQERLsagidpstafILSSEAAIAGAESTKHMQaqagrstyispeilasvpdpgAMAAAAWYRAAALAVKDMYQAS
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQIlstetnyvpitrgnRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDAttkaphwpvgvdgnrppAKIPVPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAAEAVVNLRDRlnewdskvgdgdcgstmYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKAssksgitskqfSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQAS
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIagaaaaaglsladvaaeaKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQLSQQGHvlevtieaaaeavvNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCkaayaklkassksGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGamaaaawyraaalaVKDMYQAS
***AAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGV**********************************GHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKAS***GITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEA*******************YISPEILASVPDPGAMAAAAWYRAAALAVK******
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDG*********************************HVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDM****
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPM*************RPLQLSQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIA**********QAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQAS
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG*******************************LSQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDMY***
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MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQLSQQGHVLEVTxxxxxxxxxxxxxxxxxxxxxVGDGDCGSTMYRGATAILEDKKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query507 2.2.26 [Sep-21-2011]
O04059594 Putative 3,4-dihydroxy-2- N/A no 1.0 0.853 0.820 0.0
Q8VC30578 Bifunctional ATP-dependen yes no 0.950 0.833 0.420 7e-85
Q3LXA3575 Bifunctional ATP-dependen yes no 0.930 0.820 0.401 8e-83
Q4KLZ6578 Bifunctional ATP-dependen yes no 0.954 0.837 0.418 7e-82
Q58DK4578 Bifunctional ATP-dependen yes no 0.930 0.816 0.401 3e-81
F1RKQ4579 Bifunctional ATP-dependen yes no 0.930 0.815 0.410 3e-77
P45510552 Dihydroxyacetone kinase O N/A no 0.921 0.846 0.403 7e-77
O74215591 Dihydroxyacetone kinase 2 yes no 0.944 0.810 0.338 4e-69
P43550591 Dihydroxyacetone kinase 2 yes no 0.942 0.808 0.360 3e-67
O74192608 Dihydroxyacetone kinase O yes no 0.940 0.784 0.340 8e-66
>sp|O04059|DHBK_SOLLC Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum GN=DHBK PE=2 SV=1 Back     alignment and function desciption
 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/518 (82%), Positives = 465/518 (89%), Gaps = 11/518 (2%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           MLTAAICGDVFASP VDSILAGI AVTGPMGCLLIV NYTGDRLNFGLAAEQAKSEGYKV
Sbjct: 77  MLTAAICGDVFASPNVDSILAGIRAVTGPMGCLLIVKNYTGDRLNFGLAAEQAKSEGYKV 136

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E+VIVGDDCALPPPRGIAGRRGLAGT+LV+K+AGAAAA GL LADVAAEAKRASEMVGTM
Sbjct: 137 EMVIVGDDCALPPPRGIAGRRGLAGTLLVHKVAGAAAACGLPLADVAAEAKRASEMVGTM 196

Query: 121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
           GVALSVCT PGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLK+ILS ETN
Sbjct: 197 GVALSVCTSPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKEILSPETN 256

Query: 181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
           YVPITRG+RVVL+INGLGATP+MELMI AGKAVP LQLEHGLAV+RVYTGSFMTSLDMAG
Sbjct: 257 YVPITRGSRVVLLINGLGATPLMELMIIAGKAVPELQLEHGLAVDRVYTGSFMTSLDMAG 316

Query: 241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQL 300
           FSIS+MKAD+ IL  LDA TKAP+WPVG +GNRPPAKIPVP+PPSHS+K +++L RP +L
Sbjct: 317 FSISVMKADQAILDRLDAPTKAPNWPVGAEGNRPPAKIPVPLPPSHSIKIEKTLSRPEKL 376

Query: 301 SQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLND 360
           S QGH+LE  IEAAA  VVNLRD LNEWD+KVGDGDCGSTM+RGA AILED KKYYPLND
Sbjct: 377 SPQGHILETAIEAAATEVVNLRDNLNEWDNKVGDGDCGSTMFRGAVAILEDMKKYYPLND 436

Query: 361 AAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQF-----------S 409
            AETVNEIGASI RVMGGTSGILY IFCKAAYAKLK +++S +T+  +           S
Sbjct: 437 PAETVNEIGASIGRVMGGTSGILYSIFCKAAYAKLKENAESVVTAIHWADALEAAIAAVS 496

Query: 410 KYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGR 469
           KYGGA+AGYRT+LDALIPA + L+ERL+AG DP+ AFI+S+EAA AGAESTKHMQAQAGR
Sbjct: 497 KYGGASAGYRTLLDALIPALSALKERLNAGDDPADAFIISAEAASAGAESTKHMQAQAGR 556

Query: 470 STYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQAS 507
           STY+  +ILASVPDPGAMAAAAWYRAAALAVK+ Y  +
Sbjct: 557 STYVPGDILASVPDPGAMAAAAWYRAAALAVKEKYNTA 594

Solanum lycopersicum (taxid: 4081)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: -
>sp|Q8VC30|DHAK_MOUSE Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Mus musculus GN=Dak PE=2 SV=1 Back     alignment and function description
>sp|Q3LXA3|DHAK_HUMAN Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Homo sapiens GN=DAK PE=1 SV=2 Back     alignment and function description
>sp|Q4KLZ6|DHAK_RAT Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Rattus norvegicus GN=Dak PE=1 SV=1 Back     alignment and function description
>sp|Q58DK4|DHAK_BOVIN Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Bos taurus GN=DAK PE=2 SV=1 Back     alignment and function description
>sp|F1RKQ4|DHAK_PIG Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Sus scrofa GN=DAK PE=1 SV=2 Back     alignment and function description
>sp|P45510|DHAK_CITFR Dihydroxyacetone kinase OS=Citrobacter freundii GN=dhaK PE=1 SV=3 Back     alignment and function description
>sp|O74215|DAK2_SCHPO Dihydroxyacetone kinase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dak2 PE=3 SV=2 Back     alignment and function description
>sp|P43550|DAK2_YEAST Dihydroxyacetone kinase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAK2 PE=1 SV=1 Back     alignment and function description
>sp|O74192|DAK_PICPA Dihydroxyacetone kinase OS=Komagataella pastoris GN=DAK PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
224125748595 predicted protein [Populus trichocarpa] 0.996 0.848 0.829 0.0
224120380595 predicted protein [Populus trichocarpa] 0.996 0.848 0.833 0.0
225471001594 PREDICTED: putative 3,4-dihydroxy-2-buta 1.0 0.853 0.839 0.0
297834694595 dihydroxyacetone kinase family protein [ 1.0 0.852 0.791 0.0
350538091594 putative 3,4-dihydroxy-2-butanone kinase 1.0 0.853 0.820 0.0
255586153585 Dihydroxyacetone kinase, putative [Ricin 0.919 0.796 0.836 0.0
15229519595 Dihydroxyacetone kinase [Arabidopsis tha 1.0 0.852 0.797 0.0
356520687592 PREDICTED: putative 3,4-dihydroxy-2-buta 0.996 0.853 0.794 0.0
356531116592 PREDICTED: putative 3,4-dihydroxy-2-buta 0.996 0.853 0.791 0.0
297852464593 dihydroxyacetone kinase family protein [ 0.994 0.849 0.779 0.0
>gi|224125748|ref|XP_002329708.1| predicted protein [Populus trichocarpa] gi|222870616|gb|EEF07747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/516 (82%), Positives = 469/516 (90%), Gaps = 11/516 (2%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           ML+AAICG+VF SP VD+IL+GI AVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV
Sbjct: 77  MLSAAICGEVFTSPQVDAILSGIRAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 136

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E VIVGDDCALPP RGI GRRGLAGTILVNKIAGAAAA GLSL +VAAEAKRASEMVGTM
Sbjct: 137 ETVIVGDDCALPPLRGIVGRRGLAGTILVNKIAGAAAATGLSLDEVAAEAKRASEMVGTM 196

Query: 121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
           GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPV+VVVSHVL+QILS + N
Sbjct: 197 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVEVVVSHVLQQILSPDRN 256

Query: 181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
           YVPIT GNRVVL++NGLGATP MELMI AGKAVP LQLEHGLAV+RVYTGSFMTSLDMAG
Sbjct: 257 YVPITPGNRVVLLVNGLGATPAMELMIVAGKAVPQLQLEHGLAVDRVYTGSFMTSLDMAG 316

Query: 241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQL 300
           FSISIMKADE IL+ LDA+TKAPHWPVGVDGNRPPAKIPVP+P SHS KSDESL RP QL
Sbjct: 317 FSISIMKADEAILQRLDASTKAPHWPVGVDGNRPPAKIPVPLPLSHSGKSDESLSRPQQL 376

Query: 301 SQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLND 360
           S+QGH+LEV IEAA  A+++LRD LNEWD +VGDGDCGSTMYRGATAILED KK+YPLND
Sbjct: 377 SEQGHLLEVAIEAAVNAIIDLRDNLNEWDGRVGDGDCGSTMYRGATAILEDMKKHYPLND 436

Query: 361 AAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASSKSGITSKQF-----------S 409
           AAETV EIG+SIRRVMGGTSGI+Y IFCKAA AKLKA+++S +TSKQ+           S
Sbjct: 437 AAETVGEIGSSIRRVMGGTSGIIYTIFCKAACAKLKANTQSVVTSKQWAEALEASIAAVS 496

Query: 410 KYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGR 469
           KY GA+AG+RT+LDALIPA+AVLQERL+AG DP  AF+LSSEAA+AGAEST+HMQAQAGR
Sbjct: 497 KYSGASAGFRTLLDALIPASAVLQERLNAGDDPCIAFLLSSEAAVAGAESTRHMQAQAGR 556

Query: 470 STYISPEILASVPDPGAMAAAAWYRAAALAVKDMYQ 505
           S YISP+ILA+VPDPGAMAAA+WYRAAALA+K+ YQ
Sbjct: 557 SAYISPDILATVPDPGAMAAASWYRAAALAIKNKYQ 592

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120380|ref|XP_002318315.1| predicted protein [Populus trichocarpa] gi|222858988|gb|EEE96535.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225471001|ref|XP_002270550.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Vitis vinifera] gi|297742797|emb|CBI35477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297834694|ref|XP_002885229.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297331069|gb|EFH61488.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|350538091|ref|NP_001234326.1| putative 3,4-dihydroxy-2-butanone kinase [Solanum lycopersicum] gi|7387627|sp|O04059.1|DHBK_SOLLC RecName: Full=Putative 3,4-dihydroxy-2-butanone kinase gi|1929056|emb|CAA72805.1| putative 3,4-dihydroxy-2-butanone kinase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|255586153|ref|XP_002533737.1| Dihydroxyacetone kinase, putative [Ricinus communis] gi|223526353|gb|EEF28649.1| Dihydroxyacetone kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15229519|ref|NP_188404.1| Dihydroxyacetone kinase [Arabidopsis thaliana] gi|71143068|gb|AAZ23925.1| At3g17770 [Arabidopsis thaliana] gi|332642484|gb|AEE76005.1| Dihydroxyacetone kinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356520687|ref|XP_003528992.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Glycine max] Back     alignment and taxonomy information
>gi|356531116|ref|XP_003534124.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|297852464|ref|XP_002894113.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297339955|gb|EFH70372.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
TAIR|locus:2089784595 AT3G17770 [Arabidopsis thalian 1.0 0.852 0.714 2.3e-190
TAIR|locus:2007680593 AT1G48430 [Arabidopsis thalian 0.994 0.849 0.697 3.1e-186
MGI|MGI:2385084578 Dak "dihydroxyacetone kinase 2 0.930 0.816 0.393 8.4e-74
RGD|1311026578 Dak "dihydroxyacetone kinase 2 0.932 0.818 0.398 1.1e-73
ZFIN|ZDB-GENE-060929-652576 dak "dihydroxyacetone kinase 2 0.930 0.819 0.373 1.6e-72
UNIPROTKB|Q3LXA3575 DAK "Bifunctional ATP-dependen 0.934 0.824 0.374 2.5e-72
UNIPROTKB|F1RKQ4579 DAK "Bifunctional ATP-dependen 0.932 0.816 0.385 3.2e-72
UNIPROTKB|Q58DK4578 DAK "Bifunctional ATP-dependen 0.930 0.816 0.379 1.8e-71
UNIPROTKB|A0JN77578 DAK "Dihydroxyacetone kinase 2 0.930 0.816 0.379 4.8e-71
UNIPROTKB|F1Q0K5578 DAK "Uncharacterized protein" 0.934 0.820 0.368 2.1e-70
TAIR|locus:2089784 AT3G17770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1845 (654.5 bits), Expect = 2.3e-190, P = 2.3e-190
 Identities = 370/518 (71%), Positives = 402/518 (77%)

Query:     1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
             MLTAAICGDVFASPPVDSILAGI AVTG  GCLLIV NYTGDRLNFGLAAEQAKSEGYKV
Sbjct:    77 MLTAAICGDVFASPPVDSILAGIRAVTGTEGCLLIVKNYTGDRLNFGLAAEQAKSEGYKV 136

Query:    61 EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIXXXXXXXXXXXXXXXXXXKRASEMVGTM 120
             E VIVG+DCALPPPRGIAGRRGLAGT+LV+K+                  K ASEMVGTM
Sbjct:   137 ETVIVGEDCALPPPRGIAGRRGLAGTVLVHKVAGAAAAAGLSLEKVAAEAKCASEMVGTM 196

Query:   121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
             GVALSVCTLPGQVTSDRLG  KMELGLGIHGEPGAAV D++PVDVVVSHVL+QILS ETN
Sbjct:   197 GVALSVCTLPGQVTSDRLGAQKMELGLGIHGEPGAAVVDVEPVDVVVSHVLQQILSPETN 256

Query:   181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
             YVPITRGNRVVLM+NGLG TP+MELMIAAGKAVP LQLE GLAV+RVYTG FMTSLDMAG
Sbjct:   257 YVPITRGNRVVLMVNGLGGTPLMELMIAAGKAVPKLQLEFGLAVDRVYTGFFMTSLDMAG 316

Query:   241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQL 300
             FSISIMKAD  IL  LDA TKAP+WPVG DGNRPPAKIPVP+PPS S+KS ES  RPL+L
Sbjct:   317 FSISIMKADHSILDRLDAPTKAPNWPVGTDGNRPPAKIPVPVPPSRSIKSMESQSRPLEL 376

Query:   301 SQQGHXXXXXXXXXXXXXXNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPLND 360
             S++G               +L+D LNEWD KVGDGDCGSTMYRGATAILED K YYPLND
Sbjct:   377 SKEGQVLEAAIQAAATVIISLKDSLNEWDGKVGDGDCGSTMYRGATAILEDMKNYYPLND 436

Query:   361 AAETVNEIGASIRRVMGGTSGILYHIFCXXXXXXXXXXXXXGITSKQFS----------- 409
             AAETVNEIG SI+R MGGTSGI+YH+ C              +T K +S           
Sbjct:   437 AAETVNEIGLSIKRAMGGTSGIIYHLLCKAAYAELKANAQSEVTPKNWSEALKSSIASVS 496

Query:   410 KYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGR 469
             KYGGATAGYRTMLDALIPA+ VL+E+LSAG DP +AFILS EAA AGAEST  MQAQAGR
Sbjct:   497 KYGGATAGYRTMLDALIPASQVLEEKLSAGEDPISAFILSGEAATAGAESTIQMQAQAGR 556

Query:   470 STYISPEILASVPDPGXXXXXXXXXXXXXXVKDMYQAS 507
             S+Y+S E LA+VPDPG              VK+ Y+ S
Sbjct:   557 SSYVSAENLATVPDPGAMAAAGWYNAAARAVKEQYEGS 594
GO:0004371 "glycerone kinase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006071 "glycerol metabolic process" evidence=IEA;ISS
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
TAIR|locus:2007680 AT1G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:2385084 Dak "dihydroxyacetone kinase 2 homolog (yeast)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311026 Dak "dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-652 dak "dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q3LXA3 DAK "Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RKQ4 DAK "Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DK4 DAK "Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN77 DAK "Dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0K5 DAK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04059DHBK_SOLLC2, ., 7, ., 1, ., -0.82041.00.8535N/Ano
Q3LXA3DHAK_HUMAN4, ., 6, ., 1, ., 1, 50.40110.93090.8208yesno
F1RKQ4DHAK_PIG4, ., 6, ., 1, ., 1, 50.41030.93090.8151yesno
P43550DAK2_YEAST2, ., 7, ., 1, ., 2, 90.36030.94280.8087yesno
Q8VC30DHAK_MOUSE4, ., 6, ., 1, ., 1, 50.42070.95060.8339yesno
Q4KLZ6DHAK_RAT4, ., 6, ., 1, ., 1, 50.41840.95460.8373yesno
O74215DAK2_SCHPO2, ., 7, ., 1, ., 2, 90.33840.94470.8104yesno
Q58DK4DHAK_BOVIN4, ., 6, ., 1, ., 1, 50.40110.93090.8166yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.290.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_122000063
hypothetical protein (595 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_scaffold_44000008
glycerol kinase (EC-2.7.1.30) (519 aa)
•     • 0.697
fgenesh4_pg.C_scaffold_21030000001
Predicted protein (304 aa)
• •    •0.616
gw1.2233.1.1
Predicted protein (347 aa)
•     • 0.550
grail3.15892000101
Predicted protein (89 aa)
•     • 0.417

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
TIGR02361574 TIGR02361, dak_ATP, dihydroxyacetone kinase, ATP-d 0.0
PRK14479568 PRK14479, PRK14479, dihydroxyacetone kinase; Provi 1e-134
pfam02733326 pfam02733, Dak1, Dak1 domain 1e-120
PTZ00375584 PTZ00375, PTZ00375, dihydroxyacetone kinase-like p 1e-119
PRK14481331 PRK14481, PRK14481, dihydroxyacetone kinase subuni 6e-95
TIGR02363329 TIGR02363, dhaK1, dihydroxyacetone kinase, DhaK su 2e-77
COG2376323 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydra 1e-75
PRK11468356 PRK11468, PRK11468, dihydroxyacetone kinase subuni 7e-63
PRK14483329 PRK14483, PRK14483, DhaKLM operon coactivator DhaQ 7e-52
TIGR02362326 TIGR02362, dhaK1b, probable dihydroxyacetone kinas 2e-48
pfam02734174 pfam02734, Dak2, DAK2 domain 6e-36
TIGR02365194 TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, ph 8e-19
PRK10005210 PRK10005, PRK10005, dihydroxyacetone kinase subuni 1e-12
COG2376323 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydra 3e-04
>gnl|CDD|233835 TIGR02361, dak_ATP, dihydroxyacetone kinase, ATP-dependent Back     alignment and domain information 
 Score =  580 bits (1498), Expect = 0.0
 Identities = 240/520 (46%), Positives = 312/520 (60%), Gaps = 34/520 (6%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTG-PMGCLLIVTNYTGDRLNFGLAAEQAKSEGYK 59
           MLTAA+ GDVFASP    ILA I AV G   G LLIV NYTGDRLNFGLAAE+AK+EGY 
Sbjct: 66  MLTAAVAGDVFASPSTKQILAAIRAVVGSEAGTLLIVKNYTGDRLNFGLAAEKAKAEGYN 125

Query: 60  VEIVIVGDDCALPPPRGI-AGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVG 118
           VE+VIVGDD ++   +G   GRRGLAGT+LV+KIAGAAAA GLSLA+VA  A+ A++ + 
Sbjct: 126 VEMVIVGDDVSVGRKKGGLVGRRGLAGTVLVHKIAGAAAARGLSLAEVAKVAQAAADNLV 185

Query: 119 TMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVADLQP-VDVVVSHVLKQILS 176
           T+G +L  C +PG+  ++  L   +MELG+GIH EPGA      P  D+VV  +LK++L 
Sbjct: 186 TIGASLDHCHVPGETEAEPELKEDEMELGMGIHNEPGAKRISPIPSSDLVVQLMLKKLLD 245

Query: 177 TET--NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMT 234
                +YV    G+ VVL++N LG    +EL I A + V  L L + +   R+Y+G+FMT
Sbjct: 246 ETDKRSYVKFNEGDEVVLLVNNLGGVSNLELGIIADEVVEQLALHYNIIPVRIYSGTFMT 305

Query: 235 SLDMAGFSISIMKADEV---ILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSD 291
           SL+  GFSI+++ A E    IL  LDA T+AP WPV    ++P  +    +  S     +
Sbjct: 306 SLNGPGFSITLLNATEAGKSILDLLDAPTEAPGWPVAAYSSKPWREKREVVSSSAPELIE 365

Query: 292 ESLGRPLQLSQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILED 351
           E+  R         ++   +E+   A++ L   L + D+K GDGDCGST+ RGA AILE 
Sbjct: 366 ETAVRSY----DPQLVAAILESGCAALLELEPHLTKLDTKAGDGDCGSTLARGAEAILEL 421

Query: 352 -KKKYYPLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLK--ASSKSGITSK-- 406
            K K  PLND A  + +I   +  VMGGTSG LY IF  AA   LK  AS K  IT +  
Sbjct: 422 LKSKKLPLNDPATLLAQISDVVEGVMGGTSGALYSIFFSAAAQSLKQNASKKEEITPEAW 481

Query: 407 ---------QFSKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGA 457
                       KY GA  G RTM+DAL P    L+   S           + +AA AGA
Sbjct: 482 AAALKTALDALYKYTGARPGDRTMIDALQPFVEALEAGKS-------NLNAAVKAAEAGA 534

Query: 458 ESTKHMQAQAGRSTYISPEILASVPDPGAMAAAAWYRAAA 497
           E+TK M+A+AGR++Y+S E L  VPDPGA+  AAW R  A
Sbjct: 535 EATKKMKAKAGRASYVSSEALEGVPDPGAVGLAAWLRGLA 574

This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses (PMID:11985845). Length = 574
>gnl|CDD|237723 PRK14479, PRK14479, dihydroxyacetone kinase; Provisional Back     alignment and domain information
>gnl|CDD|202365 pfam02733, Dak1, Dak1 domain Back     alignment and domain information
>gnl|CDD|185583 PTZ00375, PTZ00375, dihydroxyacetone kinase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237724 PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>gnl|CDD|233836 TIGR02363, dhaK1, dihydroxyacetone kinase, DhaK subunit Back     alignment and domain information
>gnl|CDD|225251 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|183150 PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>gnl|CDD|172956 PRK14483, PRK14483, DhaKLM operon coactivator DhaQ; Provisional Back     alignment and domain information
>gnl|CDD|213706 TIGR02362, dhaK1b, probable dihydroxyacetone kinase DhaK1b subunit Back     alignment and domain information
>gnl|CDD|217208 pfam02734, Dak2, DAK2 domain Back     alignment and domain information
>gnl|CDD|233837 TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit Back     alignment and domain information
>gnl|CDD|182192 PRK10005, PRK10005, dihydroxyacetone kinase subunit DhaL; Provisional Back     alignment and domain information
>gnl|CDD|225251 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 507
PRK14479568 dihydroxyacetone kinase; Provisional 100.0
KOG2426582 consensus Dihydroxyacetone kinase/glycerone kinase 100.0
PTZ00375584 dihydroxyacetone kinase-like protein; Provisional 100.0
TIGR02361574 dak_ATP dihydroxyacetone kinase, ATP-dependent. Th 100.0
PRK14481331 dihydroxyacetone kinase subunit DhaK; Provisional 100.0
TIGR02363329 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two t 100.0
TIGR02362326 dhaK1b probable dihydroxyacetone kinase DhaK1b sub 100.0
PRK14483329 DhaKLM operon coactivator DhaQ; Provisional 100.0
PRK11468356 dihydroxyacetone kinase subunit DhaK; Provisional 100.0
PF02733325 Dak1: Dak1 domain; InterPro: IPR004006 Dihydroxyac 100.0
COG2376323 DAK1 Dihydroxyacetone kinase [Carbohydrate transpo 100.0
PRK10005210 dihydroxyacetone kinase subunit DhaL; Provisional 100.0
TIGR02365194 dha_L_ycgS dihydroxyacetone kinase, phosphoprotein 100.0
PF02734175 Dak2: DAK2 domain; InterPro: IPR004007 Dihydroxyac 100.0
TIGR03599 530 YloV DAK2 domain fusion protein YloV. This model d 100.0
COG1461 542 Predicted kinase related to dihydroxyacetone kinas 99.92
COG2376323 DAK1 Dihydroxyacetone kinase [Carbohydrate transpo 99.84
PRK11377473 dihydroxyacetone kinase subunit M; Provisional 87.67
TIGR03599530 YloV DAK2 domain fusion protein YloV. This model d 87.58
>PRK14479 dihydroxyacetone kinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.7e-143  Score=1162.50  Aligned_cols=485  Identities=41%  Similarity=0.604  Sum_probs=442.1

Q ss_pred             CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (507)
Q Consensus         1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R   80 (507)
                      |||||||||||||||++||++|||++++++|||||||||||||||||||+|+|+++||+|++|+|+||||+.++.+++||
T Consensus        67 ml~aav~G~vFaSPs~~~i~~ai~~v~~~~Gvl~iv~NYtGD~lnF~~A~e~a~~~g~~v~~v~v~DDva~~~~~~~~~R  146 (568)
T PRK14479         67 MLDAAVCGNVFTSPSADQVYAAIRAADGGAGVLLIVGNYAGDVMNFGLAAELARAEGIDVRTVVVTDDVASAPSGETAGR  146 (568)
T ss_pred             ccceeeccCccCCCCHHHHHHHHHhccCCCCEEEEeCCcHHHHhhHHHHHHHHHhcCCcEEEEEeCCcccCCCCCcCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999655568899


Q ss_pred             cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 010541           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD  159 (507)
Q Consensus        81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~  159 (507)
                      ||+|||||||||+||+|++|+||+||+++++++++|++||||+|++||+|| ++|.|+|++||||||||||||||++|.+
T Consensus       147 RG~AG~v~v~KiaGAaA~~G~~L~ev~~~~~~~~~~~~tigval~~c~~P~~~~~~f~l~~~e~E~G~GiHgEpG~~~~~  226 (568)
T PRK14479        147 RGIAGTVLVFKIAGAAAEAGLDLDEVAAIARKANARTRSMGVALDGCTLPGAGEPLFTLPEGEMELGLGIHGEPGIEREA  226 (568)
T ss_pred             cchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcceeeeeccCcccCCCCCCCCcCCCCeeEeccccCCCCceeecC
Confidence            999999999999999999999999999999999999999999999999999 7899999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeecccccccCCC
Q 010541          160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA  239 (507)
Q Consensus       160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G~~~TSldm~  239 (507)
                      +.++++++++|+++|+++    ++++++|+|+|||||||+||+||||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus       227 ~~~a~~~~~~~~~~l~~~----~~~~~~d~v~~lvN~lG~t~~~El~i~~~~~~~~l~~~-~i~v~~~~vG~~~Tsldm~  301 (568)
T PRK14479        227 LPTADELADRLVDRILAD----LPLGAGERVAVLVNGLGATPYEELFVVYGAVARLLAAR-GITVVRPEVGEFVTSLDMA  301 (568)
T ss_pred             CCCHHHHHHHHHHHHHhh----cCCCCCCeEEEEecCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEeeeecccccCCCC
Confidence            999999999999999986    68899999999999999999999999999999999888 9999999999999999999


Q ss_pred             cceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc-CCCccccccHHHHHHHHHHHHHHH
Q 010541          240 GFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESL-GRPLQLSQQGHVLEVTIEAAAEAV  318 (507)
Q Consensus       240 GfSiTll~ld~~l~~~ldap~~a~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~l  318 (507)
                      |||||||++||+|++|||+||++|+||..... .+...  ..... .  ...... ........+...+++||..+++.|
T Consensus       302 G~SiTl~~~d~~~~~~ldap~~~~~~~~~~~~-~~~~~--~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~l  375 (568)
T PRK14479        302 GASLTLMKLDDELEELWDAPADTPAFRRGGAV-EPVEY--VEAAE-E--DDAEEPPRASKASRATAANLVAALDAVAEAL  375 (568)
T ss_pred             ccEEEeeeCCHHHHHHhCCCCCCCCCCCCCcc-cccCc--ccccc-c--ccccccccCCccccCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999662110 01000  00000 0  000000 011122235688999999999999


Q ss_pred             HHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcCCC--CCHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhh
Q 010541          319 VNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYYPL--NDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLK  396 (507)
Q Consensus       319 i~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~~~--~~~~~~l~~i~~a~~~~~GGtSG~Ly~~~f~~~a~~l~  396 (507)
                      ++++++||+||+.+||||||+||++||+++.+.+++ ...  .++.++|+.+++++++.||||||+|||+||+++++.++
T Consensus       376 ~~~~d~Ln~LD~~VGDGD~G~nM~~G~~ai~~~l~~-~~~~~~~~~~~l~~i~~all~~~GGtSG~Lys~~f~~~a~~l~  454 (568)
T PRK14479        376 IDNEDELGELDAVAGDGDHGIGMARGSKAALAAARA-AVEAGAGAGSVLAAAGDAWADHAGGTSGPLWGTALRAAGKALG  454 (568)
T ss_pred             HHhHHHHHHhcCCcCCCcHHHHHHHHHHHHHHHHhh-ccccCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999973 332  68999999999999999999999999999999999998


Q ss_pred             ccCCCCCChHHH-----------HhhcCCCCCCcchhhhHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcchhh
Q 010541          397 ASSKSGITSKQF-----------SKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQA  465 (507)
Q Consensus       397 ~~~~~~~~~~~~-----------~~~G~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~aA~~gae~Tk~m~A  465 (507)
                      ++  ++++.++|           ++||+|+||||||||+|+|+++++++...++.++.++|++++++|++|+++|++|+|
T Consensus       455 ~~--~~l~~~~la~al~~g~~~v~~~G~AkpGDkTMLDaL~Pa~eal~~~~~~~~~~~~~l~~a~~aA~~gae~T~~m~A  532 (568)
T PRK14479        455 DK--DEPTAADFAAAVRAAVDAIQELGGAQVGDKTMVDALVPFADALEAAAAAGADLAEAWAAAAEAAEEGAEATADLVP  532 (568)
T ss_pred             cC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCCeeeeeHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCchhhh
Confidence            75  57888887           999999999999999999999999998888899999999999999999999999999


Q ss_pred             hhccccccCcccCCCCCCchHHHHHHHHHHHHHHH
Q 010541          466 QAGRSTYISPEILASVPDPGAMAAAAWYRAAALAV  500 (507)
Q Consensus       466 k~GRAsY~gers~g~~pDPGA~av~~il~al~~~~  500 (507)
                      ++|||+|+|||++|++ ||||+++++||++|++.+
T Consensus       533 ~~GRAsYlgers~Gv~-DPGA~~~~~il~al~~~~  566 (568)
T PRK14479        533 RMGRARYLGERSLGTP-DAGAVSLALIFTAIAGSL  566 (568)
T ss_pred             hhcccccccccccCCC-CCcHHHHHHHHHHHHHHh
Confidence            9999999999999765 999999999999998865

>KOG2426 consensus Dihydroxyacetone kinase/glycerone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00375 dihydroxyacetone kinase-like protein; Provisional Back     alignment and domain information
>TIGR02361 dak_ATP dihydroxyacetone kinase, ATP-dependent Back     alignment and domain information
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit Back     alignment and domain information
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit Back     alignment and domain information
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional Back     alignment and domain information
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>PF02733 Dak1: Dak1 domain; InterPro: IPR004006 Dihydroxyacetone kinase (glycerone kinase) 2 Back     alignment and domain information
>COG2376 DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10005 dihydroxyacetone kinase subunit DhaL; Provisional Back     alignment and domain information
>TIGR02365 dha_L_ycgS dihydroxyacetone kinase, phosphoprotein-dependent, L subunit Back     alignment and domain information
>PF02734 Dak2: DAK2 domain; InterPro: IPR004007 Dihydroxyacetone kinase (glycerone kinase) 2 Back     alignment and domain information
>TIGR03599 YloV DAK2 domain fusion protein YloV Back     alignment and domain information
>COG1461 Predicted kinase related to dihydroxyacetone kinase [General function prediction only] Back     alignment and domain information
>COG2376 DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11377 dihydroxyacetone kinase subunit M; Provisional Back     alignment and domain information
>TIGR03599 YloV DAK2 domain fusion protein YloV Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
1un9_A552 Crystal Structure Of The Dihydroxyacetone Kinase Fr 7e-67
1un8_A552 Crystal Structure Of The Dihydroxyacetone Kinase Of 7e-67
3pno_A357 Crystal Structure Of E.Coli Dha Kinase Dhak (H56n) 3e-37
3pnk_A357 Crystal Structure Of E.Coli Dha Kinase Dhak Length 3e-37
3pnm_A357 Crystal Structure Of E.Coli Dha Kinase Dhak (H56a) 3e-37
1oi2_A366 X-Ray Structure Of The Dihydroxyacetone Kinase From 3e-37
1uoe_A366 Crystal Structure Of The Dihydroxyacetone Kinase Fr 4e-37
3ct4_A332 Structure Of Dha-Kinase Subunit Dhak From L. Lactis 9e-36
2iu6_A336 Regulation Of The Dha Operon Of Lactococcus Lactis 4e-29
2iu4_A336 Dihydroxyacetone Kinase Operon Co-Activator Dha-Dha 7e-28
>pdb|1UN9|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase From C. Freundii In Complex With Amp-Pnp And Mg2+ Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  251 bits (641), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 185/493 (37%), Positives = 247/493 (50%), Gaps = 38/493 (7%)
Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           MLTAA+CGDVFASP VD++L  I AVTG  GCLLIV NYTGDRLNFGLAAE+A+  GY V
Sbjct: 73  MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNV 132
Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIXXXXXXXXXXXXXXXXXXKRASEMVGTM 120
           E++IVGDD +LP  +     RG+AGTILV+KI                  + A+    ++
Sbjct: 133 EMLIVGDDISLPDNKH---PRGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSL 189
Query: 121 GVALSVCTLPGQV-TSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTET 179
           GVALS C LP +   + R  PG  ELG+GIHGEPGA+V D Q    VV+ ++ ++L+   
Sbjct: 190 GVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVIDTQNSAQVVNLMVDKLLAA-- 247
Query: 180 NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239
             +P T   R+ +MIN LG   V E+ I   + + +  L H      +   S +T+LDM 
Sbjct: 248 --LPET--GRLAVMINNLGGVSVAEMAIIT-RELASSPL-HSRIDWLIGPASLVTALDMK 301
Query: 240 GFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQ 299
           GFS++ +  +E I K L    +  +WP  V    PP +I   +    S + +       Q
Sbjct: 302 GFSLTAIVLEESIEKALLTEVETSNWPTPV----PPREITCVVSSHASARVE------FQ 351
Query: 300 LSQQGHXXXXXXXXXXXXXXNLRDRLNEWDSKVGDGDCGSTMYRGATAILE-DKKKYYPL 358
            S                  +L   LN  D+KVGDGD GST    A  I     ++  PL
Sbjct: 352 PSANA-LVAGIVELVTATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHRQQLPL 410
Query: 359 NDAAETVNEIGASIRRVMGGTSGILYHIFCXXX------XXXXXXXXXXGITSKQFSKYG 412
           N+ A     IG  +  VMGG+SG+L  IF                    G+   +F  YG
Sbjct: 411 NNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQKLEQGANVVEALNTGLAQMKF--YG 468
Query: 413 GATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHMQAQAGRSTY 472
           GA  G RTM+DAL PA   L  +      P         A      +    +A AGR++Y
Sbjct: 469 GADEGDRTMIDALQPALTSLLAQ------PKNLQAAFDAAQAGAERTCLSSKANAGRASY 522
Query: 473 ISPEILASVPDPG 485
           +S E L    DPG
Sbjct: 523 LSSESLLGNMDPG 535
>pdb|1UN8|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase Of C. Freundii (Native Form) Length = 552 Back     alignment and structure
>pdb|3PNO|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak (H56n) Length = 357 Back     alignment and structure
>pdb|3PNK|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak Length = 357 Back     alignment and structure
>pdb|3PNM|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak (H56a) Length = 357 Back     alignment and structure
>pdb|1OI2|A Chain A, X-Ray Structure Of The Dihydroxyacetone Kinase From Escherichia Coli Length = 366 Back     alignment and structure
>pdb|1UOE|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase From E. Coli In Complex With Glyceraldehyde Length = 366 Back     alignment and structure
>pdb|3CT4|A Chain A, Structure Of Dha-Kinase Subunit Dhak From L. Lactis Length = 332 Back     alignment and structure
>pdb|2IU6|A Chain A, Regulation Of The Dha Operon Of Lactococcus Lactis Length = 336 Back     alignment and structure
>pdb|2IU4|A Chain A, Dihydroxyacetone Kinase Operon Co-Activator Dha-Dhaq Length = 336 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
1un8_A552 Dihydroxyacetone kinase; transferase; HET: MYY; 2. 0.0
3ct4_A332 PTS-dependent dihydroxyacetone kinase, dihydroxyac 1e-122
2iu4_A336 DHA-DHAQ, dihydroxyacetone kinase; transferase, CO 1e-120
1oi2_A366 Hypothetical protein YCGT; kinase, dihydroxyaceton 1e-119
3pnl_B211 PTS-dependent dihydroxyacetone kinase, ADP-bindin 9e-43
3cr3_A192 PTS-dependent dihydroxyacetone kinase, ADP- bindin 2e-38
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A* Length = 552 Back     alignment and structure
 Score =  522 bits (1347), Expect = 0.0
 Identities = 204/510 (40%), Positives = 274/510 (53%), Gaps = 40/510 (7%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           MLTAA+CGDVFASP VD++L  I AVTG  GCLLIV NYTGDRLNFGLAAE+A+  GY V
Sbjct: 73  MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNV 132

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E++IVGDD +LP        RG+AGTILV+KIAG  A  G +LA V  EA+ A+    ++
Sbjct: 133 EMLIVGDDISLPDN---KHPRGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSL 189

Query: 121 GVALSVCTLPGQ-VTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTET 179
           GVALS C LP +   + R  PG  ELG+GIHGEPGA+V D Q    VV+ ++ ++L+   
Sbjct: 190 GVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVIDTQNSAQVVNLMVDKLLA--- 246

Query: 180 NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239
               +    R+ +MIN LG   V E+ I   +   +      +    +   S +T+LDM 
Sbjct: 247 ---ALPETGRLAVMINNLGGVSVAEMAIITRELASSPL-HSRIDW-LIGPASLVTALDMK 301

Query: 240 GFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDESLGRPLQ 299
           GFS++ +  +E I K L    +  +WP            PVP      + S  +  R   
Sbjct: 302 GFSLTAIVLEESIEKALLTEVETSNWPT-----------PVPPREITCVVSSHASARVEF 350

Query: 300 LSQQGHVLEVTIEAAAEAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILED-KKKYYPL 358
                 ++   +E     + +L   LN  D+KVGDGD GST    A  I     ++  PL
Sbjct: 351 QPSANALVAGIVELVTATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHRQQLPL 410

Query: 359 NDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYAKLKASS------KSGITSKQFSKYG 412
           N+ A     IG  +  VMGG+SG+L  IF  AA  KL+  +       +G+   Q   YG
Sbjct: 411 NNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQKLEQGANVVEALNTGL--AQMKFYG 468

Query: 413 GATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAEST-KHMQAQAGRST 471
           GA  G RTM+DAL PA   L    +   +   AF    +AA AGAE T    +A AGR++
Sbjct: 469 GADEGDRTMIDALQPALTSLL---AQPKNLQAAF----DAAQAGAERTCLSSKANAGRAS 521

Query: 472 YISPEILASVPDPGAMAAAAWYRAAALAVK 501
           Y+S E L    DPGA   A  ++A A +  
Sbjct: 522 YLSSESLLGNMDPGAQRLAMVFKALAESEL 551
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp} Length = 332 Back     alignment and structure
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A Length = 336 Back     alignment and structure
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A Length = 366 Back     alignment and structure
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} PDB: 2btd_A* Length = 211 Back     alignment and structure
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1 Length = 192 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
1un8_A552 Dihydroxyacetone kinase; transferase; HET: MYY; 2. 100.0
3ct4_A332 PTS-dependent dihydroxyacetone kinase, dihydroxyac 100.0
1oi2_A366 Hypothetical protein YCGT; kinase, dihydroxyaceton 100.0
2iu4_A336 DHA-DHAQ, dihydroxyacetone kinase; transferase, CO 100.0
3pnl_B211 PTS-dependent dihydroxyacetone kinase, ADP-bindin 100.0
3cr3_A192 PTS-dependent dihydroxyacetone kinase, ADP- bindin 100.0
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-140  Score=1133.55  Aligned_cols=463  Identities=44%  Similarity=0.656  Sum_probs=413.1

Q ss_pred             CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (507)
Q Consensus         1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R   80 (507)
                      ||||||||+||||||++||++|||++++++|||||||||||||||||||+|+|+++||+|++|+|+||||++++   +||
T Consensus        73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R  149 (552)
T 1un8_A           73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP  149 (552)
T ss_dssp             SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred             ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999864   899


Q ss_pred             cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCCCCCCC-CCCCCeeEEeccccCCCCccccc
Q 010541           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD  159 (507)
Q Consensus        81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg~~~~~-~l~~~e~E~G~GiHgEpG~~~~~  159 (507)
                      ||+|||||||||+||+||+|+||+||+++++++++|++||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus       150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~  229 (552)
T 1un8_A          150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID  229 (552)
T ss_dssp             CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred             CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence            99999999999999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhcccCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeec--ccccccC
Q 010541          160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD  237 (507)
Q Consensus       160 ~~~a~~lv~~ml~~ll~~~~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~~~i~v~r~~~G--~~~TSld  237 (507)
                      ++++++++++|+++|+++    ++++  |+|+|||||||+||+||||++++++.++|+++ |   +|+|+|  +||||||
T Consensus       230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld  299 (552)
T 1un8_A          230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD  299 (552)
T ss_dssp             CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred             CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence            999999999999999986    6777  89999999999999999999999999999888 8   999999  9999999


Q ss_pred             CCcceEEEeeccHHHHHhhcCcCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCcccCCCccccccHHHHHHHHHHHH
Q 010541          238 MAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIP--VPMPPSHSMKSDESLGRPLQLSQQGHVLEVTIEAAA  315 (507)
Q Consensus       238 m~GfSiTll~ld~~l~~~ldap~~a~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  315 (507)
                      |+|||||||++||++++|||+||++|+||+...   + ...+  .+... . . . .. ..+..   + ..+++||..+|
T Consensus       300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~~~---~-~~~~~~~~~~~-~-~-~-~~-~~~~~---~-~~l~~~l~~~a  366 (552)
T 1un8_A          300 MKGFSLTAIVLEESIEKALLTEVETSNWPTPVP---P-REITCVVSSHA-S-A-R-VE-FQPSA---N-ALVAGIVELVT  366 (552)
T ss_dssp             BEEEEEEEEECCTTHHHHHHSCCCCSSCCCCBC---C-CCCCEECCCCC-C-C-S-CC-CCCBC---C-HHHHHHHHHHH
T ss_pred             CCcceEEeecCCHHHHHHhcCCCCCCCCCCccC---c-ccccccccccc-c-c-c-CC-CCcch---h-HHHHHHHHHHH
Confidence            999999999999999999999999999997431   1 0000  00000 0 0 0 00 11111   3 56899999999


Q ss_pred             HHHHHhHHhhhhccCCCCCCchhHHHHHHHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 010541          316 EAVVNLRDRLNEWDSKVGDGDCGSTMYRGATAILEDKKKYY--PLNDAAETVNEIGASIRRVMGGTSGILYHIFCKAAYA  393 (507)
Q Consensus       316 ~~li~~e~~Ln~LD~~vGDGD~G~tm~~ga~ai~~~l~~~~--~~~~~~~~l~~i~~a~~~~~GGtSG~Ly~~~f~~~a~  393 (507)
                      +.|++++++||+||+++||||||+||++||+++.+.+++ .  +..++.++|+.+++.+++.||||||+|||+||+++++
T Consensus       367 ~~l~~~~d~Ln~LD~~VGDGD~GtNM~~G~~av~~~l~~-~~~~~~~~~~~l~~i~~~ll~~~GG~SG~Lyg~~f~~~ak  445 (552)
T 1un8_A          367 ATLSDLETHLNALDAKVGDGDTGSTFAAAAREIASLLHR-QQLPLNNLATLFALIGERLTVVMGGSSGVLMSIFFTAAGQ  445 (552)
T ss_dssp             HHHHHTHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHT-TCSBTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999973 3  4568999999999999999999999999999999999


Q ss_pred             HhhccCCCCCChHHH-------HhhcCCCCCCcchhhhHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcch-hh
Q 010541          394 KLKASSKSGITSKQF-------SKYGGATAGYRTMLDALIPAAAVLQERLSAGIDPSTAFILSSEAAIAGAESTKHM-QA  465 (507)
Q Consensus       394 ~l~~~~~~~~~~~~~-------~~~G~A~~GDkTMlDaL~Pa~~al~~~~~~~~~~~~~l~~A~~aA~~gae~Tk~m-~A  465 (507)
                      .++++  ++++ +.|       ++||+++||||||||+|+|+++++++       +.++|++++++|++|+++|++| +|
T Consensus       446 ~l~~~--~~l~-~al~ag~~~i~~~g~AkpGdkTMLDaL~Paaeal~~-------~~~~l~~a~~AA~~gae~T~~m~~A  515 (552)
T 1un8_A          446 KLEQG--ANVV-EALNTGLAQMKFYGGADEGDRTMIDALQPALTSLLA-------QPKNLQAAFDAAQAGAERTCLSSKA  515 (552)
T ss_dssp             HHHTT--CCHH-HHHHHHHHHHHHHHCCCTTSSSTHHHHHHHHHHHHH-------STTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HhcCC--chHH-HHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhCcccchh
Confidence            99865  3444 344       88999999999999999999999965       3456899999999999999999 99


Q ss_pred             hhccccccCcccC-CCCCCchHHHHHHHHHHHHHHHH
Q 010541          466 QAGRSTYISPEIL-ASVPDPGAMAAAAWYRAAALAVK  501 (507)
Q Consensus       466 k~GRAsY~gers~-g~~pDPGA~av~~il~al~~~~~  501 (507)
                      ++|||||+|||++ |++ ||||+++++||+++++.+.
T Consensus       516 ~~GRAsYlgers~~Gvv-DpGA~~~~~il~al~~~l~  551 (552)
T 1un8_A          516 NAGRASYLSSESLLGNM-DPGAQRLAMVFKALAESEL  551 (552)
T ss_dssp             CC--------CCCGGGC-CHHHHHHHHHHHHHHTTC-
T ss_pred             hhhhhcccchhhcCCCC-CcCHHHHHHHHHHHHHHhc
Confidence            9999999999998 765 9999999999999987653
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp} Back     alignment and structure
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A Back     alignment and structure
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A Back     alignment and structure
>3pnl_B PTS-dependent dihydroxyacetone kinase, ADP-bindin DHAL; structural genomics, montreal-kingston bacterial structural initiative, BSGI; HET: ADP; 2.20A {Escherichia coli} SCOP: a.208.1.0 PDB: 2btd_A* Back     alignment and structure
>3cr3_A PTS-dependent dihydroxyacetone kinase, ADP- binding subunit DHAL; transient protein-protein complex transferase complex PTS- dependent dihydroxyacetone kinase; HET: ADP; 2.10A {Lactococcus lactis subsp} SCOP: a.208.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 507
d1oi2a_347 c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, 3e-97
d1un8a4335 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citro 4e-88
d1un8a1215 a.208.1.1 (A:336-550) Citrobacter dihydroxyacetone 2e-31
d3cr3a1192 a.208.1.1 (A:1-192) PTS-dependent dihydroxyacetone 6e-31
>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK {Escherichia coli [TaxId: 562]} Length = 347 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DAK1/DegV-like
superfamily: DAK1/DegV-like
family: DAK1
domain: Dihydroxyacetone kinase subunit K, DhaK
species: Escherichia coli [TaxId: 562]

 Score =  296 bits (758), Expect = 3e-97
 Identities = 104/289 (35%), Positives = 143/289 (49%), Gaps = 22/289 (7%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           ML+ A  G++F SP  D I      V G  G LLI+ NYTGD LNF  A E     G KV
Sbjct: 59  MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKV 118

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
             V++ DD A+      AGRRG+A T+L+ K+ GAAA  G SL   A   ++ +    ++
Sbjct: 119 TTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSI 178

Query: 121 GVALSVCTLPGQ-VTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILS--- 176
           G+AL  CT+P     S  L   +ME G+GIHGEPG        +D  V  +   +L    
Sbjct: 179 GIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGS 238

Query: 177 -----------------TETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219
                             +    P+  G+RV+ ++N LGATP+ EL     +     Q +
Sbjct: 239 YHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQ-Q 297

Query: 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268
            GL +ER   G++ TSLDM GFSI+++K D+  L   DA    P    G
Sbjct: 298 AGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 346
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]} Length = 335 Back     information, alignment and structure
>d1un8a1 a.208.1.1 (A:336-550) Citrobacter dihydroxyacetone kinase extra ATP-binding domain {Citrobacter freundii [TaxId: 546]} Length = 215 Back     information, alignment and structure
>d3cr3a1 a.208.1.1 (A:1-192) PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL {Lactococcus lactis [TaxId: 1358]} Length = 192 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
d1oi2a_347 Dihydroxyacetone kinase subunit K, DhaK {Escherich 100.0
d1un8a4335 Dihydroxyacetone kinase {Citrobacter freundii [Tax 100.0
d3cr3a1192 PTS-dependent dihydroxyacetone kinase, ADP-binding 100.0
d1un8a1215 Citrobacter dihydroxyacetone kinase extra ATP-bind 100.0
>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DAK1/DegV-like
superfamily: DAK1/DegV-like
family: DAK1
domain: Dihydroxyacetone kinase subunit K, DhaK
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-101  Score=785.26  Aligned_cols=267  Identities=39%  Similarity=0.621  Sum_probs=250.7

Q ss_pred             CcceeccCCCCCCCCHHHHHHHHHhccCCCCeEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 010541            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (507)
Q Consensus         1 mL~aav~G~vFaSPs~~~i~~ai~~~~~~~Gvl~iv~NYtGD~lnFg~A~e~a~~~G~~v~~v~v~DDva~~~~~~~~~R   80 (507)
                      ||||||||+||||||++||++|||++++++||||||||||||+||||||+|+|+++||+|++|+|+||||++++..++||
T Consensus        59 mLdAav~G~vFaSPs~~qI~~aik~v~~~~GvLliv~NYtGDvlNF~mA~E~a~~egi~v~~vvv~DDva~~~~~~~~gR  138 (347)
T d1oi2a_          59 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR  138 (347)
T ss_dssp             SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred             cccceeccccccCCChHHHHHHHHhhcCCCCEEEEeccchhhhccHHHHHHHHHhcCCceEEEEeCCccccCCccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999887778999


Q ss_pred             cccchhhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccceeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 010541           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD  159 (507)
Q Consensus        81 RG~aG~v~v~KiaGA~A~~G~~l~ev~~~~~~~~~~~~t~gval~~c~~Pg-~~~~~~l~~~e~E~G~GiHgEpG~~~~~  159 (507)
                      ||+|||||||||+|||||+|+||+||+++++++++|++||||+|+|||+|+ ++|+|+|++||||||||||||||++|.|
T Consensus       139 RG~AGtvlv~KiaGAaAe~G~~Ldev~~~a~~~~~~~~Tigvals~c~vP~~g~~~f~L~~~emE~GmGIHGEpG~~r~~  218 (347)
T d1oi2a_         139 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP  218 (347)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred             CccchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcceeeEEecCCCCCCCCCCCcccCCCceeccccccCCCCccccC
Confidence            999999999999999999999999999999999999999999999999999 7999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHhcc--------------------cCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 010541          160 LQPVDVVVSHVLKQILSTE--------------------TNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE  219 (507)
Q Consensus       160 ~~~a~~lv~~ml~~ll~~~--------------------~~~~~~~~~~~v~vlvNnlG~ts~~El~~~~~~~~~~L~~~  219 (507)
                      ++++++++++|+++|+++.                    ++++++++||+|+|||||||+||+||||++++++.++|+++
T Consensus       219 ~~~a~~lv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vlVN~LG~ts~lEl~i~~~~v~~~L~~~  298 (347)
T d1oi2a_         219 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA  298 (347)
T ss_dssp             CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhccccccccccccccccccccccccccCCCCCCeEEEEEcCCCCCcHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999752                    45689999999999999999999999999999999999998


Q ss_pred             cCCeEEEeeecccccccCCCcceEEEeeccHHHHHhhcCcCCCCCCCCC
Q 010541          220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG  268 (507)
Q Consensus       220 ~~i~v~r~~~G~~~TSldm~GfSiTll~ld~~l~~~ldap~~a~~w~~~  268 (507)
                       ||+|+|+|+|+|||||||+|||||||++||+|++|||+||+||+|+|.
T Consensus       299 -gi~v~r~~vG~f~TSldm~G~SiTll~ldd~l~~~ldap~~tpa~~w~  346 (347)
T d1oi2a_         299 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG  346 (347)
T ss_dssp             -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred             -CCeEEEEEeeccccccCCCccEEEEEeCCHHHHHHhCCCcCCcccCCC
Confidence             999999999999999999999999999999999999999999999874
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]} Back     information, alignment and structure
>d3cr3a1 a.208.1.1 (A:1-192) PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1un8a1 a.208.1.1 (A:336-550) Citrobacter dihydroxyacetone kinase extra ATP-binding domain {Citrobacter freundii [TaxId: 546]} Back     information, alignment and structure