Citrus Sinensis ID: 010556
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 507 | 2.2.26 [Sep-21-2011] | |||||||
| Q9S9K4 | 475 | Aspartic proteinase-like | no | no | 0.512 | 0.547 | 0.311 | 1e-20 | |
| A2ZC67 | 410 | Aspartic proteinase Asp1 | N/A | no | 0.548 | 0.678 | 0.276 | 1e-16 | |
| Q766C3 | 437 | Aspartic proteinase nepen | N/A | no | 0.508 | 0.590 | 0.291 | 4e-16 | |
| Q9LS40 | 500 | Protein ASPARTIC PROTEASE | no | no | 0.538 | 0.546 | 0.289 | 5e-16 | |
| Q9LZL3 | 453 | Aspartic proteinase PCS1 | no | no | 0.583 | 0.653 | 0.263 | 2e-15 | |
| Q0IU52 | 410 | Aspartic proteinase Asp1 | no | no | 0.524 | 0.648 | 0.261 | 5e-15 | |
| Q766C2 | 438 | Aspartic proteinase nepen | N/A | no | 0.526 | 0.609 | 0.289 | 2e-14 | |
| Q6IE75 | 514 | Beta-secretase 2 OS=Rattu | yes | no | 0.489 | 0.482 | 0.271 | 5e-14 | |
| Q9JL18 | 514 | Beta-secretase 2 OS=Mus m | yes | no | 0.489 | 0.482 | 0.271 | 8e-14 | |
| Q9LX20 | 528 | Aspartic proteinase-like | no | no | 0.564 | 0.541 | 0.250 | 2e-13 |
| >sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 | Back alignment and function desciption |
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Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 133/289 (46%), Gaps = 29/289 (10%)
Query: 23 CIYERRYAEMSTSSGVLGVDVISFGN-----ESELVPQRAVFGCENLETGDLYT--QRAD 75
C Y YA+ STS G D+++ ++ + Q VFGC + ++G L D
Sbjct: 154 CSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQSGQLGNGDSAVD 213
Query: 76 GIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPDMVFSHSDPFR 135
G+MG G+ SV+ QL G FS C +V GG + G+ P + + P
Sbjct: 214 GVMGFGQSNTSVLSQLAATGDAKRVFSHCLD--NVKGGGIFAVGVVDSPKVKTTPMVP-N 270
Query: 136 SPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHV 195
+YN+ L + V G L + I G GT++DSGTT AY P D+LI+
Sbjct: 271 QMHYNVMLMGMDVDGTSLDLPRSIVRNG-GTIVDSGTTLAYFP----KVLYDSLIETILA 325
Query: 196 LKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKVSGA 255
+ ++ CFS + + + + FP V F + KLT+ P +YLF +
Sbjct: 326 RQPVKLHIVEETFQCFSFS----TNVDEAFPPVSFEFEDSVKLTVYPHDYLFTLEE--EL 379
Query: 256 YCLGIFQNSDSTT-------LLGGIVVRNTLVTYDRGNDKVGFWKTNCS 297
YC G +Q TT LLG +V+ N LV YD N+ +G+ NCS
Sbjct: 380 YCFG-WQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNCS 427
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: - |
| >sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6IE75|BACE2_RAT Beta-secretase 2 OS=Rattus norvegicus GN=Bace2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9JL18|BACE2_MOUSE Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 507 | ||||||
| 225458774 | 659 | PREDICTED: aspartic proteinase-like prot | 0.994 | 0.764 | 0.709 | 0.0 | |
| 255538124 | 641 | Aspartic proteinase nepenthesin-1 precur | 0.994 | 0.786 | 0.714 | 0.0 | |
| 224136884 | 626 | predicted protein [Populus trichocarpa] | 0.992 | 0.803 | 0.719 | 0.0 | |
| 42568291 | 631 | aspartyl protease family protein [Arabid | 0.996 | 0.800 | 0.656 | 0.0 | |
| 356565521 | 634 | PREDICTED: aspartic proteinase-like prot | 0.992 | 0.793 | 0.649 | 0.0 | |
| 297795137 | 665 | predicted protein [Arabidopsis lyrata su | 0.964 | 0.735 | 0.635 | 0.0 | |
| 356514298 | 663 | PREDICTED: aspartic proteinase-like prot | 0.994 | 0.760 | 0.649 | 0.0 | |
| 357482719 | 640 | Aspartic proteinase-like protein [Medica | 0.996 | 0.789 | 0.632 | 0.0 | |
| 449511696 | 639 | PREDICTED: aspartic proteinase-like prot | 0.992 | 0.787 | 0.639 | 0.0 | |
| 242050744 | 632 | hypothetical protein SORBIDRAFT_02g03815 | 0.980 | 0.786 | 0.628 | 0.0 |
| >gi|225458774|ref|XP_002283258.1| PREDICTED: aspartic proteinase-like protein 2 [Vitis vinifera] gi|302142232|emb|CBI19435.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/517 (70%), Positives = 440/517 (85%), Gaps = 13/517 (2%)
Query: 2 SNTYQALKCNPDCNCDNDRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGC 61
S+TY +KCN DCNCD+D C+YERRYAEMS+SSGVLG D+ISFGN+SE+VPQRAVFGC
Sbjct: 135 SSTYHPVKCNMDCNCDHDGVNCVYERRYAEMSSSSGVLGEDIISFGNQSEVVPQRAVFGC 194
Query: 62 ENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGIT 121
EN+ETGDLY+QRADGIMGLGRG+LS+VDQLV+K VI+DSFSLCYGGM VGGGAMVLGGI
Sbjct: 195 ENVETGDLYSQRADGIMGLGRGQLSIVDQLVDKNVINDSFSLCYGGMHVGGGAMVLGGIP 254
Query: 122 PPPDMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGHA 181
PPPDMVFS SDP+RSPYYNIELKE+ VAGKPLK+SP FD HGTVLDSGTTYAYLP A
Sbjct: 255 PPPDMVFSRSDPYRSPYYNIELKEIHVAGKPLKLSPSTFDRKHGTVLDSGTTYAYLPEEA 314
Query: 182 FAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLS 241
F AF+DA+IK++H LK+I GPDPNY+DICFSGAGRDVS+LSK FP+VDMVF NGQKL+L+
Sbjct: 315 FVAFRDAIIKKSHNLKQIHGPDPNYNDICFSGAGRDVSQLSKAFPEVDMVFSNGQKLSLT 374
Query: 242 PENYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301
PENYLF+H KV GAYCLGIF+N DSTTLLGGI+VRNTLVTYDR N+K+GFWKTNCSELW+
Sbjct: 375 PENYLFQHTKVHGAYCLGIFRNGDSTTLLGGIIVRNTLVTYDRENEKIGFWKTNCSELWK 434
Query: 302 RLQLP-------------SVPAPPPSISSSNDSSIGMPPRLAPDGLPLNVLPGAFQIGVI 348
RL +P SV AP P +S +N++++GMPP +AP GLP VLPG FQ+G+I
Sbjct: 435 RLHIPGAPAAAPIVPTPKSVSAPAPVVSYNNNTTVGMPPTVAPSGLPQEVLPGEFQVGLI 494
Query: 349 TFDMSFSLNNSHMKPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDYLVRWGIFPDESDN 408
TFDMSFS+N S+MKPNFTEL+EFIAHEL+++ +VH LNF SKG+ ++RW IFP ES
Sbjct: 495 TFDMSFSVNYSNMKPNFTELAEFIAHELEINASQVHFLNFFSKGNHSVIRWAIFPAESAT 554
Query: 409 YISNTTALNIILRLREHHMQFPERFGSHQLVKWNIEPQIKQTWWQRNLVAVVVGIVVTLL 468
YISN+TA++IIL+L+EH + PERFGS+QLV+W +EPQIK+TWW+++ VVVG+++TL+
Sbjct: 555 YISNSTAMSIILQLKEHRVHLPERFGSYQLVEWKVEPQIKRTWWEQHFWTVVVGVIITLI 614
Query: 469 LGLSILGLWSVWKRRQEASKTYQPVGAVVPEQELQPL 505
LGLS G+W VWK RQ A TY+P+GA VPEQELQ L
Sbjct: 615 LGLSTFGVWFVWKWRQNAVGTYKPIGARVPEQELQQL 651
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538124|ref|XP_002510127.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223550828|gb|EEF52314.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224136884|ref|XP_002326969.1| predicted protein [Populus trichocarpa] gi|222835284|gb|EEE73719.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|42568291|ref|NP_199124.3| aspartyl protease family protein [Arabidopsis thaliana] gi|332007527|gb|AED94910.1| aspartyl protease family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356565521|ref|XP_003550988.1| PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297795137|ref|XP_002865453.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311288|gb|EFH41712.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356514298|ref|XP_003525843.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357482719|ref|XP_003611646.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355512981|gb|AES94604.1| Aspartic proteinase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449511696|ref|XP_004164029.1| PREDICTED: aspartic proteinase-like protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|242050744|ref|XP_002463116.1| hypothetical protein SORBIDRAFT_02g038150 [Sorghum bicolor] gi|241926493|gb|EER99637.1| hypothetical protein SORBIDRAFT_02g038150 [Sorghum bicolor] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 507 | ||||||
| TAIR|locus:2167776 | 631 | AT5G43100 [Arabidopsis thalian | 0.996 | 0.800 | 0.621 | 3.2e-175 | |
| TAIR|locus:2083098 | 632 | AT3G50050 [Arabidopsis thalian | 0.968 | 0.776 | 0.541 | 8e-140 | |
| TAIR|locus:2172661 | 493 | AT5G22850 [Arabidopsis thalian | 0.542 | 0.557 | 0.338 | 1.7e-36 | |
| TAIR|locus:2200023 | 492 | AT1G08210 [Arabidopsis thalian | 0.550 | 0.567 | 0.349 | 3.5e-36 | |
| TAIR|locus:2040545 | 512 | AT2G36670 [Arabidopsis thalian | 0.534 | 0.529 | 0.323 | 3.6e-34 | |
| TAIR|locus:2198753 | 485 | AT1G05840 [Arabidopsis thalian | 0.546 | 0.571 | 0.309 | 2.5e-27 | |
| TAIR|locus:2183617 | 482 | AT5G36260 [Arabidopsis thalian | 0.520 | 0.547 | 0.333 | 4.6e-27 | |
| TAIR|locus:2075512 | 488 | AT3G02740 [Arabidopsis thalian | 0.556 | 0.577 | 0.285 | 4.5e-23 | |
| TAIR|locus:2200365 | 475 | AT1G65240 [Arabidopsis thalian | 0.554 | 0.591 | 0.302 | 1.1e-21 | |
| TAIR|locus:2095042 | 500 | ASPG1 "ASPARTIC PROTEASE IN GU | 0.538 | 0.546 | 0.292 | 2.3e-21 |
| TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1702 (604.2 bits), Expect = 3.2e-175, P = 3.2e-175
Identities = 315/507 (62%), Positives = 386/507 (76%)
Query: 1 MSNTYQALKCNPDCNCDNDRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFG 60
+S +YQALKCNPDCNCD++ K C+YERRYAEMS+SSGVL D+ISFGNES+L PQRAVFG
Sbjct: 122 LSTSYQALKCNPDCNCDDEGKLCVYERRYAEMSSSSGVLSEDLISFGNESQLSPQRAVFG 181
Query: 61 CENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGI 120
CEN ETGDL++QRADGIMGLGRG+LSVVDQLV+KGVI D FSLCYGGM+VGGGAMVLG I
Sbjct: 182 CENEETGDLFSQRADGIMGLGRGKLSVVDQLVDKGVIEDVFSLCYGGMEVGGGAMVLGKI 241
Query: 121 TPPPDMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDSGTTYAYLPGH 180
+PPP MVFSHSDPFRSPYYNI+LK++ VAGK LK++P++F+G HGTVLDSGTTYAY P
Sbjct: 242 SPPPGMVFSHSDPFRSPYYNIDLKQMHVAGKSLKLNPKVFNGKHGTVLDSGTTYAYFPKE 301
Query: 181 AFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTL 240
AF A KDA+IKE LKRI GPDPNYDD+CFSGAGRDV+E+ FP++ M FGNGQKL L
Sbjct: 302 AFIAIKDAVIKEIPSLKRIHGPDPNYDDVCFSGAGRDVAEIHNFFPEIAMEFGNGQKLIL 361
Query: 241 SPENYLFRHMKVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELW 300
SPENYLFRH KV GAYCLGIF + DSTTLLGGIVVRNTLVTYDR NDK+GF KTNCS++W
Sbjct: 362 SPENYLFRHTKVRGAYCLGIFPDRDSTTLLGGIVVRNTLVTYDRENDKLGFLKTNCSDIW 421
Query: 301 RRLQLXXXXXXXXXXXXXXXXXXXXXXRLAPDGLPLNVLPGAFQIGVITFDMSFSLNNSH 360
RRL A P + LPG F++GVITF++S S+NNS
Sbjct: 422 RRLAAPESPAPTSPISQNKSSNISPSP--ATSESPTSHLPGVFRVGVITFEVSISVNNSS 479
Query: 361 MKPNFTELSEFIAHELQVDDIEVHLLNFSSKGHDYLVRWGIFPDESDNYISNTTALNIIL 420
+KP F+E+++FIAHEL + +V LLNFSS G++Y ++WG+FP +S YISNTTALNI+L
Sbjct: 480 LKPKFSEIADFIAHELDIQSAQVRLLNFSSSGNEYRLKWGVFPPQSSEYISNTTALNIML 539
Query: 421 RLREHHMQFPERFGSHQLVKWNIEPQIKQTWWQRNXXXXXXXXXXXXXXXXXXXXXXXXX 480
L+E+ ++ P +FGS++L++W E + KQ+WW+++
Sbjct: 540 LLKENRLRLPGQFGSYKLLEWKAEQKKKQSWWEKHLLGVVGGAMISLLVTSVMIKLALVW 599
Query: 481 KRRQEASKTYQPVGAVVPEQELQPLQS 507
+RR++ TY+PV A + EQELQPL S
Sbjct: 600 RRRKQEEATYEPVNAAIKEQELQPLSS 626
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| TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.23 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00014924001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (636 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 507 | |||
| cd05476 | 265 | cd05476, pepsin_A_like_plant, Chroloplast Nucleoid | 8e-62 | |
| cd05472 | 299 | cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin | 2e-35 | |
| cd05471 | 283 | cd05471, pepsin_like, Pepsin-like aspartic proteas | 6e-33 | |
| cd05475 | 273 | cd05475, nucellin_like, Nucellins, plant aspartic | 8e-25 | |
| cd06096 | 326 | cd06096, Plasmepsin_5, Plasmepsins are a class of | 2e-23 | |
| pfam00026 | 316 | pfam00026, Asp, Eukaryotic aspartyl protease | 9e-19 | |
| cd05473 | 364 | cd05473, beta_secretase_like, Beta-secretase, aspa | 3e-15 | |
| PLN03146 | 431 | PLN03146, PLN03146, aspartyl protease family prote | 3e-15 | |
| cd05489 | 362 | cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit | 1e-12 | |
| cd05478 | 317 | cd05478, pepsin_A, Pepsin A, aspartic protease pro | 6e-10 | |
| cd05474 | 295 | cd05474, SAP_like, SAPs, pepsin-like proteinases s | 5e-09 | |
| cd05490 | 325 | cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family | 1e-06 | |
| cd05486 | 316 | cd05486, Cathespin_E, Cathepsin E, non-lysosomal a | 2e-06 | |
| cd05488 | 320 | cd05488, Proteinase_A_fungi, Fungal Proteinase A , | 6e-06 | |
| cd05487 | 326 | cd05487, renin_like, Renin stimulates production o | 4e-05 | |
| cd06098 | 317 | cd06098, phytepsin, Phytepsin, a plant homolog of | 0.001 | |
| COG2976 | 207 | COG2976, COG2976, Uncharacterized protein conserve | 0.003 | |
| cd05477 | 318 | cd05477, gastricsin, Gastricsins, asparate proteas | 0.004 |
| >gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
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Score = 202 bits (517), Expect = 8e-62
Identities = 88/285 (30%), Positives = 117/285 (41%), Gaps = 61/285 (21%)
Query: 23 CIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGR 82
C YE Y + S++SGVL + +FG+ S VP FGC G ADGI+GLGR
Sbjct: 31 CSYEYSYGDGSSTSGVLATETFTFGDSSVSVP-NVAFGCGTDNEGG-SFGGADGILGLGR 88
Query: 83 GRLSVVDQLVEKGVISDSFSLCYGGMD--VGGGAMVLG----GITPPPDMVFSHSDPFRS 136
G LS+V QL G + FS C D G ++LG +P
Sbjct: 89 GPLSLVSQL---GSTGNKFSYCLVPHDDTGGSSPLILGDAADLGGSGVVYTPLVKNPANP 145
Query: 137 PYYNIELKELRVAGKPLKVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192
YY + L+ + V GK L + P +F DG GT++DSGTT YLP
Sbjct: 146 TYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIIDSGTTLTYLP-------------- 191
Query: 193 THVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHMKV 252
+P + + F G L L PENY
Sbjct: 192 -----------------------------DPAYPDLTLHFDGGADLELPPENYFVDVG-- 220
Query: 253 SGAYCLGIFQNS-DSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNC 296
G CL I +S ++LG I +N LV YD N ++GF +C
Sbjct: 221 EGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265
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This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265 |
| >gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
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| >gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
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| >gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation | Back alignment and domain information |
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| >gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
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| >gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease | Back alignment and domain information |
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| >gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease | Back alignment and domain information |
|---|
| >gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall | Back alignment and domain information |
|---|
| >gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
|---|
| >gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
| >gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
|---|
| >gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease | Back alignment and domain information |
|---|
| >gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
|---|
| >gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
|---|
| >gnl|CDD|225523 COG2976, COG2976, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 507 | |||
| cd05489 | 362 | xylanase_inhibitor_I_like TAXI-I inhibits degradat | 100.0 | |
| cd05472 | 299 | cnd41_like Chloroplast Nucleoids DNA-binding Prote | 100.0 | |
| PLN03146 | 431 | aspartyl protease family protein; Provisional | 100.0 | |
| KOG1339 | 398 | consensus Aspartyl protease [Posttranslational mod | 100.0 | |
| cd06096 | 326 | Plasmepsin_5 Plasmepsins are a class of aspartic p | 100.0 | |
| cd05478 | 317 | pepsin_A Pepsin A, aspartic protease produced in g | 100.0 | |
| cd05490 | 325 | Cathepsin_D2 Cathepsin_D2, pepsin family of protei | 100.0 | |
| PTZ00165 | 482 | aspartyl protease; Provisional | 100.0 | |
| cd05476 | 265 | pepsin_A_like_plant Chroloplast Nucleoids DNA-bind | 100.0 | |
| cd05486 | 316 | Cathespin_E Cathepsin E, non-lysosomal aspartic pr | 100.0 | |
| cd05477 | 318 | gastricsin Gastricsins, asparate proteases produce | 100.0 | |
| cd05487 | 326 | renin_like Renin stimulates production of angioten | 100.0 | |
| cd05488 | 320 | Proteinase_A_fungi Fungal Proteinase A , aspartic | 100.0 | |
| cd05475 | 273 | nucellin_like Nucellins, plant aspartic proteases | 100.0 | |
| cd05485 | 329 | Cathepsin_D_like Cathepsin_D_like, pepsin family o | 100.0 | |
| cd05474 | 295 | SAP_like SAPs, pepsin-like proteinases secreted fr | 100.0 | |
| cd06098 | 317 | phytepsin Phytepsin, a plant homolog of mammalian | 100.0 | |
| cd05473 | 364 | beta_secretase_like Beta-secretase, aspartic-acid | 100.0 | |
| PTZ00147 | 453 | plasmepsin-1; Provisional | 100.0 | |
| PTZ00013 | 450 | plasmepsin 4 (PM4); Provisional | 100.0 | |
| PF00026 | 317 | Asp: Eukaryotic aspartyl protease The Prosite entr | 100.0 | |
| cd06097 | 278 | Aspergillopepsin_like Aspergillopepsin_like, aspar | 100.0 | |
| cd05471 | 283 | pepsin_like Pepsin-like aspartic proteases, biloba | 100.0 | |
| PF14541 | 161 | TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D | 99.9 | |
| PF14543 | 164 | TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A | 99.68 | |
| cd05470 | 109 | pepsin_retropepsin_like Cellular and retroviral pe | 98.44 | |
| cd05479 | 124 | RP_DDI RP_DDI; retropepsin-like domain of DNA dama | 94.73 | |
| TIGR02281 | 121 | clan_AA_DTGA clan AA aspartic protease, TIGR02281 | 93.26 | |
| TIGR03698 | 107 | clan_AA_DTGF clan AA aspartic protease, AF_0612 fa | 91.83 | |
| PF01102 | 122 | Glycophorin_A: Glycophorin A; InterPro: IPR001195 | 86.52 | |
| PF08693 | 40 | SKG6: Transmembrane alpha-helix domain; InterPro: | 86.36 | |
| PF15330 | 107 | SIT: SHP2-interacting transmembrane adaptor protei | 84.41 | |
| PF08284 | 135 | RVP_2: Retroviral aspartyl protease; InterPro: IPR | 84.09 | |
| PF15050 | 133 | SCIMP: SCIMP protein | 83.78 | |
| PF01034 | 64 | Syndecan: Syndecan domain; InterPro: IPR001050 The | 83.31 | |
| PF13650 | 90 | Asp_protease_2: Aspartyl protease | 80.98 |
| >cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=354.94 Aligned_cols=291 Identities=24% Similarity=0.415 Sum_probs=225.5
Q ss_pred CCCcccccCCCC-CCC------CC----------CCCCCceEEEE-eCCCceEEEEEEEEEEEeCCcC--c---ccccce
Q 010556 1 MSNTYQALKCNP-DCN------CD----------NDRKECIYERR-YAEMSTSSGVLGVDVISFGNES--E---LVPQRA 57 (507)
Q Consensus 1 ~SSTy~~v~C~~-~C~------C~----------~~~~~C~y~i~-Y~dgs~~sG~l~~D~vsig~~s--~---i~~~~~ 57 (507)
+||||+.++|++ .|. |. -.++.|.|... |.+|+.++|.+++|+|+|+... . .+++++
T Consensus 29 ~sst~~~~~C~s~~C~~~~~~~~~~~~~~~~~~~c~~~~C~y~~~~y~~gs~t~G~l~~Dtl~~~~~~g~~~~~~~~~~~ 108 (362)
T cd05489 29 HSSTYQTVPCSSSVCSLANRYHCPGTCGGAPGPGCGNNTCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPLLVVIFNF 108 (362)
T ss_pred CcCCCCccCcCChhhccccccCCCccccCCCCCCCCCCcCeeEccccccCcEeeEEEEEEEEEecccCCCCcccceeCCE
Confidence 488999999996 362 21 02356999766 7789889999999999997532 1 267899
Q ss_pred EEEEEEeecCCCCCCCcceEEeecCCCCCHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCCC-------ceeee
Q 010556 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPPD-------MVFSH 130 (507)
Q Consensus 58 ~FG~~~~~s~~~~~~~~DGILGLG~~~~S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~~-------~~~~~ 130 (507)
.|||++++........+|||||||++.+|++.||..++.++++||+||.++...+|.|+||+.++.+. ..+.|
T Consensus 109 ~FGC~~~~~~~~~~~~~dGIlGLg~~~lSl~sql~~~~~~~~~FS~CL~~~~~~~g~l~fG~~~~~~~~~~~~~~~~~~~ 188 (362)
T cd05489 109 VFSCAPSLLLKGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALCLPSSPGGPGVAIFGGGPYYLFPPPIDLSKSLSY 188 (362)
T ss_pred EEEcCCcccccCCccccccccccCCCccchHHHhhhhcCCCcceEEEeCCCCCCCeeEEECCCchhcccccccccCCccc
Confidence 99999876433233348999999999999999999877667889999987655689999999986432 22333
Q ss_pred cCCC----CCCceEEEEeEEEEcCEeeecCCcee----cCCCcEEEecCcceEEechHHHHHHHHHHHHhhcccccccCC
Q 010556 131 SDPF----RSPYYNIELKELRVAGKPLKVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGP 202 (507)
Q Consensus 131 ~~~~----~~~~w~V~l~sI~Vgg~~l~l~~~~f----~~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~ 202 (507)
.+.. ...+|.|++++|.||++.+.+++..+ ++..+++|||||++++||+++|++|.++|.+++.........
T Consensus 189 tPl~~~~~~~~~Y~v~l~~IsVg~~~l~~~~~~~~~~~~~~~g~iiDSGTs~t~lp~~~y~~l~~a~~~~~~~~~~~~~~ 268 (362)
T cd05489 189 TPLLTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSANDRLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPRVPAA 268 (362)
T ss_pred cccccCCCCCCceEEEEEEEEECCEECCCCchhccccccCCCcEEEecCCceEEECHHHHHHHHHHHHHHhcccCcCCCC
Confidence 3322 24699999999999999998765543 245689999999999999999999999999887643322211
Q ss_pred CCCccccccCCCccccccccCCCCeEEEEECC-CeEEEeCcCCceEEeeccCCcEEEEEEEcC---CCCeeecHHHhheE
Q 010556 203 DPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNS---DSTTLLGGIVVRNT 278 (507)
Q Consensus 203 ~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~g-g~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~---~~~~ILG~~Flr~~ 278 (507)
....+.||+.....+......+|+|+|+|++ |.++.|+|++|+++... +..|+++.... .+.||||+.|||++
T Consensus 269 -~~~~~~C~~~~~~~~~~~~~~~P~it~~f~g~g~~~~l~~~ny~~~~~~--~~~Cl~f~~~~~~~~~~~IlG~~~~~~~ 345 (362)
T cd05489 269 -AVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVNWTIFGANSMVQVKG--GVACLAFVDGGSEPRPAVVIGGHQMEDN 345 (362)
T ss_pred -CCCcCccccCCCcCCcccccccceEEEEEeCCCeEEEEcCCceEEEcCC--CcEEEEEeeCCCCCCceEEEeeheecce
Confidence 1223789986544443334689999999965 79999999999998753 67899887665 34689999999999
Q ss_pred EEEEECCCCEEEEEec
Q 010556 279 LVTYDRGNDKVGFWKT 294 (507)
Q Consensus 279 yvVFD~en~rIGFA~s 294 (507)
|++||++++|||||++
T Consensus 346 ~vvyD~~~~riGfa~~ 361 (362)
T cd05489 346 LLVFDLEKSRLGFSSS 361 (362)
T ss_pred EEEEECCCCEeecccC
Confidence 9999999999999964
|
Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability |
| >cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase | Back alignment and domain information |
|---|
| >PLN03146 aspartyl protease family protein; Provisional | Back alignment and domain information |
|---|
| >KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite | Back alignment and domain information |
|---|
| >cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals | Back alignment and domain information |
|---|
| >cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases | Back alignment and domain information |
|---|
| >PTZ00165 aspartyl protease; Provisional | Back alignment and domain information |
|---|
| >cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants | Back alignment and domain information |
|---|
| >cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease | Back alignment and domain information |
|---|
| >cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa | Back alignment and domain information |
|---|
| >cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure | Back alignment and domain information |
|---|
| >cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily | Back alignment and domain information |
|---|
| >cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation | Back alignment and domain information |
|---|
| >cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases | Back alignment and domain information |
|---|
| >cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins | Back alignment and domain information |
|---|
| >cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins | Back alignment and domain information |
|---|
| >cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease | Back alignment and domain information |
|---|
| >PTZ00147 plasmepsin-1; Provisional | Back alignment and domain information |
|---|
| >PTZ00013 plasmepsin 4 (PM4); Provisional | Back alignment and domain information |
|---|
| >PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 | Back alignment and domain information |
|---|
| >cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin | Back alignment and domain information |
|---|
| >cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH | Back alignment and domain information |
|---|
| >PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A | Back alignment and domain information |
|---|
| >PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A | Back alignment and domain information |
|---|
| >cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases | Back alignment and domain information |
|---|
| >cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein | Back alignment and domain information |
|---|
| >TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family | Back alignment and domain information |
|---|
| >TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family | Back alignment and domain information |
|---|
| >PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane | Back alignment and domain information |
|---|
| >PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ] | Back alignment and domain information |
|---|
| >PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT | Back alignment and domain information |
|---|
| >PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) | Back alignment and domain information |
|---|
| >PF15050 SCIMP: SCIMP protein | Back alignment and domain information |
|---|
| >PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ] | Back alignment and domain information |
|---|
| >PF13650 Asp_protease_2: Aspartyl protease | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 507 | ||||
| 2ewy_A | 383 | Crystal Structure Of Human Bace2 In Complex With A | 6e-14 | ||
| 5pep_A | 326 | X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim | 1e-10 | ||
| 1f34_A | 326 | Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou | 2e-10 | ||
| 1psa_A | 326 | Structure Of A Pepsin(Slash)renin Inhibitor Complex | 2e-10 | ||
| 2psg_A | 370 | Refined Structure Of Porcine Pepsinogen At 1.8 Angs | 3e-10 | ||
| 3psg_A | 370 | The High Resolution Crystal Structure Of Porcine Pe | 3e-10 | ||
| 4pep_A | 326 | The Molecular And Crystal Structures Of Monoclinic | 7e-10 | ||
| 3pep_A | 326 | Revised 2.3 Angstroms Structure Of Porcine Pepsin. | 8e-10 | ||
| 3aup_A | 403 | Crystal Structure Of Basic 7s Globulin From Soybean | 1e-07 | ||
| 1tqf_A | 405 | Crystal Structure Of Human Beta Secretase Complexed | 3e-07 | ||
| 2vie_A | 392 | Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- | 3e-07 | ||
| 3qi1_A | 408 | Design And Synthesis Of Hydroxyethylamine (Hea) Bac | 3e-07 | ||
| 3exo_A | 413 | Crystal Structure Of Bace1 Bound To Inhibitor Lengt | 4e-07 | ||
| 2qzl_A | 411 | Crystal Structure Of Human Beta Secretase Complexed | 4e-07 | ||
| 3ixk_A | 405 | Potent Beta-Secretase 1 Inhibitor Length = 405 | 4e-07 | ||
| 2q11_A | 388 | Structure Of Bace Complexed To Compound 1 Length = | 4e-07 | ||
| 2q15_A | 385 | Structure Of Bace Complexed To Compound 3a Length = | 4e-07 | ||
| 2zjn_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 4e-07 | ||
| 3dm6_A | 406 | Beta-Secretase 1 Complexed With Statine-Based Inhib | 4e-07 | ||
| 2zhr_A | 411 | Crystal Structure Of Bace1 In Complex With Om99-2 A | 4e-07 | ||
| 3l58_A | 414 | Structure Of Bace Bound To Sch589432 Length = 414 | 5e-07 | ||
| 3tpj_A | 433 | Apo Structure Of Bace1 Length = 433 | 5e-07 | ||
| 2zjk_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 5e-07 | ||
| 3vv6_A | 416 | Crystal Structure Of Beta Secetase In Complex With | 5e-07 | ||
| 4dpf_A | 391 | Bace-1 In Complex With A Hea-Macrocyclic Type Inhib | 5e-07 | ||
| 3hvg_A | 411 | Structure Of Bace (Beta Secretase) In Complex With | 5e-07 | ||
| 2hm1_A | 406 | Crystal Structure Of Human Beta-Secretase (Bace) In | 5e-07 | ||
| 4ewo_A | 386 | Design And Synthesis Of Potent Hydroxyethylamine (H | 5e-07 | ||
| 3udh_A | 404 | Crystal Structure Of Bace With Compound 1 Length = | 5e-07 | ||
| 2qu2_A | 415 | Bace1 With Compound 1 Length = 415 | 5e-07 | ||
| 1fkn_A | 391 | Structure Of Beta-Secretase Complexed With Inhibito | 5e-07 | ||
| 1w50_A | 411 | Apo Structure Of Bace (beta Secretase) Length = 411 | 5e-07 | ||
| 2of0_A | 402 | X-Ray Crystal Structure Of Beta Secretase Complexed | 5e-07 | ||
| 3ckp_A | 412 | Crystal Structure Of Bace-1 In Complex With Inhibit | 5e-07 | ||
| 1ym4_A | 408 | Crystal Structure Of Human Beta Secretase Complexed | 5e-07 | ||
| 2fdp_A | 388 | Crystal Structure Of Beta-Secretase Complexed With | 6e-07 | ||
| 3r1g_B | 402 | Structure Basis Of Allosteric Inhibition Of Bace1 B | 6e-07 | ||
| 3tpr_A | 433 | Crystal Structure Of Bace1 Complexed With An Inhibi | 6e-07 | ||
| 3kmx_A | 395 | Structure Of Bace Bound To Sch346572 Length = 395 | 6e-07 | ||
| 1ym2_A | 402 | Crystal Structure Of Human Beta Secretase Complexed | 6e-07 | ||
| 3u6a_A | 390 | Rational Design And Synthesis Of Aminopiperazinones | 6e-07 | ||
| 2wjo_A | 412 | Human Bace (Beta Secretase) In Complex With Cyclohe | 6e-07 | ||
| 3cib_A | 390 | Structure Of Bace Bound To Sch727596 Length = 390 | 6e-07 | ||
| 1sgz_A | 389 | Crystal Structure Of Unbound Beta-Secretase Catalyt | 6e-07 | ||
| 3bra_A | 409 | Bace-1 Complexed With Compound 1 Length = 409 | 6e-07 | ||
| 2qk5_A | 395 | Structure Of Bace1 Bound To Sch626485 Length = 395 | 6e-07 | ||
| 4b1d_A | 388 | New Aminoimidazoles As Bace-1 Inhibitors: From Rati | 7e-07 | ||
| 2zjh_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 8e-07 | ||
| 2zji_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 8e-07 | ||
| 2va5_A | 455 | X-Ray Crystal Structure Of Beta Secretase Complexed | 1e-06 | ||
| 1flh_A | 326 | Crystal Structure Of Human Uropepsin At 2.45 A Reso | 1e-06 | ||
| 3lpi_A | 455 | Structure Of Bace Bound To Sch745132 Length = 455 | 1e-06 | ||
| 3vlb_A | 413 | Crystal Structure Of Xeg-Edgp Length = 413 | 1e-06 | ||
| 2hiz_A | 455 | Crystal Structure Of Human Beta-Secretase (Bace) In | 1e-06 | ||
| 2zjj_A | 405 | Crystal Structure Of The Human Bace1 Catalytic Doma | 1e-06 | ||
| 3vla_A | 413 | Crystal Structure Of Edgp Length = 413 | 2e-06 | ||
| 1pso_E | 326 | The Crystal Structure Of Human Pepsin And Its Compl | 2e-06 | ||
| 3vcm_A | 335 | Crystal Structure Of Human Prorenin Length = 335 | 2e-06 | ||
| 1am5_A | 324 | The Crystal Structure And Proposed Amino Acid Seque | 3e-06 | ||
| 1lya_B | 241 | Crystal Structures Of Native And Inhibited Forms Of | 1e-05 | ||
| 2x0b_A | 383 | Crystal Structure Of Human Angiotensinogen Complexe | 2e-05 | ||
| 1htr_B | 329 | Crystal And Molecular Structures Of Human Progastri | 2e-05 | ||
| 2g24_A | 333 | Ketopiperazine-Based Renin Inhibitors: Optimization | 3e-05 | ||
| 3d91_A | 341 | Human Renin In Complex With Remikiren Length = 341 | 3e-05 | ||
| 2i4q_A | 336 | Human ReninPF02342674 COMPLEX Length = 336 | 3e-05 | ||
| 2bks_A | 340 | Crystal Structure Of Renin-Pf00074777 Complex Lengt | 3e-05 | ||
| 1hrn_A | 337 | High Resolution Crystal Structures Of Recombinant H | 3e-05 | ||
| 4aa9_A | 320 | Camel Chymosin At 1.6a Resolution Length = 320 | 6e-05 | ||
| 1czi_E | 323 | Chymosin Complex With The Inhibitor Cp-113972 Lengt | 2e-04 | ||
| 3cms_A | 323 | Engineering Enzyme Sub-Site Specificity: Preparatio | 2e-04 | ||
| 4b1c_A | 375 | New Aminoimidazoles As Bace-1 Inhibitors: From Rati | 5e-04 |
| >pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 | Back alignment and structure |
| >pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 | Back alignment and structure |
| >pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 | Back alignment and structure |
| >pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 | Back alignment and structure |
| >pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 | Back alignment and structure |
| >pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 | Back alignment and structure |
| >pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 | Back alignment and structure |
| >pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 | Back alignment and structure |
| >pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 | Back alignment and structure |
| >pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 | Back alignment and structure |
| >pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 | Back alignment and structure |
| >pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 | Back alignment and structure |
| >pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 | Back alignment and structure |
| >pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 | Back alignment and structure |
| >pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 | Back alignment and structure |
| >pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 | Back alignment and structure |
| >pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 | Back alignment and structure |
| >pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 | Back alignment and structure |
| >pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 | Back alignment and structure |
| >pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 | Back alignment and structure |
| >pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 | Back alignment and structure |
| >pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 | Back alignment and structure |
| >pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 | Back alignment and structure |
| >pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 | Back alignment and structure |
| >pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 | Back alignment and structure |
| >pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 | Back alignment and structure |
| >pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 | Back alignment and structure |
| >pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 | Back alignment and structure |
| >pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 | Back alignment and structure |
| >pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 | Back alignment and structure |
| >pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 | Back alignment and structure |
| >pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 | Back alignment and structure |
| >pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 | Back alignment and structure |
| >pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 | Back alignment and structure |
| >pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 | Back alignment and structure |
| >pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 | Back alignment and structure |
| >pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 | Back alignment and structure |
| >pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 | Back alignment and structure |
| >pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 | Back alignment and structure |
| >pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 | Back alignment and structure |
| >pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 | Back alignment and structure |
| >pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 | Back alignment and structure |
| >pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 | Back alignment and structure |
| >pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 | Back alignment and structure |
| >pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 | Back alignment and structure |
| >pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 | Back alignment and structure |
| >pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 | Back alignment and structure |
| >pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 | Back alignment and structure |
| >pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 | Back alignment and structure |
| >pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 | Back alignment and structure |
| >pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 | Back alignment and structure |
| >pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 | Back alignment and structure |
| >pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 | Back alignment and structure |
| >pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 | Back alignment and structure |
| >pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 | Back alignment and structure |
| >pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 | Back alignment and structure |
| >pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 | Back alignment and structure |
| >pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 | Back alignment and structure |
| >pdb|1LYA|B Chain B, Crystal Structures Of Native And Inhibited Forms Of Human Cathepsin D: Implications For Lysosomal Targeting And Drug Design Length = 241 | Back alignment and structure |
| >pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 | Back alignment and structure |
| >pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 | Back alignment and structure |
| >pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 | Back alignment and structure |
| >pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 | Back alignment and structure |
| >pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 | Back alignment and structure |
| >pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 | Back alignment and structure |
| >pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 | Back alignment and structure |
| >pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 | Back alignment and structure |
| >pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 | Back alignment and structure |
| >pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 | Back alignment and structure |
| >pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 4e-62
Identities = 62/336 (18%), Positives = 114/336 (33%), Gaps = 43/336 (12%)
Query: 2 SNTYQALKCN-----PDCNCDNDRKECIYERRYAEMSTSSGVLGVDVISFGNESELVPQR 56
+ ++ C P C+N+ ++ + + G + DV+S + R
Sbjct: 69 CSLSGSIACGDCFNGPRPGCNNNTC-GVFPENPVINTATGGEVAEDVVSVESTDGSSSGR 127
Query: 57 AV------FGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDV 110
V F C G+ GLGR R+++ Q F++C G
Sbjct: 128 VVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTS 187
Query: 111 GGGAMVLGG---------------------ITPPPDMVFSHSDPFRSPYYNIELKELRVA 149
++ G +T P + + S Y I +K +++
Sbjct: 188 SNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKIN 247
Query: 150 GKPLKVSPRIF----DGGHGTVLDSGTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPN 205
K + ++ + G GT + + Y L + A +A IKE+ R
Sbjct: 248 SKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVA 307
Query: 206 YDDICFSGAGRDVSELSKTFPQVDMVF-GNGQKLTLSPENYLFRHMKVSGAYCLGIFQNS 264
CFS + L + P +D+V T++ N + CLG+
Sbjct: 308 PFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN--DNVVCLGVVDGG 365
Query: 265 D---STTLLGGIVVRNTLVTYDRGNDKVGFWKTNCS 297
++ ++GG + + LV +D +VGF T
Sbjct: 366 SNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLG 401
|
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 | Back alignment and structure |
|---|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 | Back alignment and structure |
|---|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 | Back alignment and structure |
|---|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 | Back alignment and structure |
|---|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 | Back alignment and structure |
|---|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 | Back alignment and structure |
|---|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 | Back alignment and structure |
|---|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 | Back alignment and structure |
|---|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 | Back alignment and structure |
|---|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 | Back alignment and structure |
|---|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 | Back alignment and structure |
|---|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 | Back alignment and structure |
|---|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 | Back alignment and structure |
|---|
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 | Back alignment and structure |
|---|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 | Back alignment and structure |
|---|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 | Back alignment and structure |
|---|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 | Back alignment and structure |
|---|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 | Back alignment and structure |
|---|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 | Back alignment and structure |
|---|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 | Back alignment and structure |
|---|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 | Back alignment and structure |
|---|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 | Back alignment and structure |
|---|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 | Back alignment and structure |
|---|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 | Back alignment and structure |
|---|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 | Back alignment and structure |
|---|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 | Back alignment and structure |
|---|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 | Back alignment and structure |
|---|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 | Back alignment and structure |
|---|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 | Back alignment and structure |
|---|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 | Back alignment and structure |
|---|
| >1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 507 | |||
| 3vla_A | 413 | EDGP; extracellular, inhibitor, plant protein; HET | 100.0 | |
| 3aup_A | 403 | SBG7S, BG, basic 7S globulin; pepsin-like fold, pl | 100.0 | |
| 1t6e_X | 381 | Xylanase inhibitor; two beta-barrel domain structu | 100.0 | |
| 1j71_A | 334 | Candidapepsin, aspartic proteinase; candida tropic | 100.0 | |
| 1tzs_A | 351 | Cathepsin E; hydrolase, aspartic protease, activat | 100.0 | |
| 2qzx_A | 342 | Candidapepsin-5; aspartic proteinase, aspartyl pro | 100.0 | |
| 3pvk_A | 342 | Candidapepsin-2; hydrolase; 1.27A {Candida albican | 100.0 | |
| 3fv3_A | 339 | SAPP1P-secreted aspartic protease 1; secreted aspa | 100.0 | |
| 2x0b_A | 383 | Renin; hydrolase-hormone complex, hydrolase hormon | 100.0 | |
| 3psg_A | 370 | Pepsinogen; hydrolase(acid proteinase zymogen); 1. | 100.0 | |
| 3cms_A | 323 | Chymosin B; hydrolase, acid proteinase; 2.00A {Bos | 100.0 | |
| 4aa9_A | 320 | Chymosin; hydrolase, aspartic peptidase, rennet; H | 100.0 | |
| 1dpj_A | 329 | Proteinase A; proteinase A, hydrolase-hydrolase in | 100.0 | |
| 3k1w_A | 341 | Renin; protease, alternative splicing, aspartyl pr | 100.0 | |
| 2apr_A | 325 | Rhizopuspepsin; hydrolase (aspartic proteinase); 1 | 100.0 | |
| 1mpp_A | 361 | Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu | 100.0 | |
| 1am5_A | 324 | Pepsin, acid proteinase; aspartyl protease, hydrol | 100.0 | |
| 1yg9_A | 330 | Aspartic protease BLA G 2; allegren, hydrolase, al | 100.0 | |
| 1miq_A | 375 | Plasmepsin; aspartic proteinase zymogen, domain op | 100.0 | |
| 1htr_B | 329 | Gastricsin; aspartyl protease; 1.62A {Homo sapiens | 100.0 | |
| 3c9x_A | 329 | Trichoderma reesei aspartic protease; aspartic pro | 100.0 | |
| 1ibq_A | 325 | Aspergillopepsin; aspartic proteinase, hydrolase; | 100.0 | |
| 1oew_A | 329 | Endothiapepsin; hydrolase, aspartic proteinase mec | 100.0 | |
| 3vf3_A | 402 | Beta-secretase 1; structure-based drug design, hyd | 100.0 | |
| 3lpj_A | 455 | Beta-secretase 1; alzheimer'S, aspartyl protease, | 100.0 | |
| 1qdm_A | 478 | Prophytepsin; aspartic proteinases, saposin-like d | 100.0 | |
| 1izd_A | 323 | Aspartic proteinase; sugar binding, acid protease, | 100.0 | |
| 2ewy_A | 383 | Beta-secretase 2; BACE2, aspartic protease, hydrol | 100.0 | |
| 1bxo_A | 323 | Protein (penicillopepsin); hydrolase, phosphonate | 100.0 | |
| 2qp8_A | 395 | Beta-secretase 1; BACE1, protease, alternative spl | 100.0 | |
| 1wkr_A | 340 | Polyporopepsin; hydrolase, hydrolase-hydrolase inh | 100.0 | |
| 3qvc_A | 451 | Histo-aspartic protease; HAP, plasmepsin, zymogen, | 100.0 | |
| 2bju_A | 453 | Plasmepsin II; aspartic proteinase, drug design, m | 100.0 | |
| 1lya_B | 241 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 100.0 | |
| 1b5f_A | 239 | Protein (cardosin A); hydrolase, aspartic proteina | 99.92 | |
| 1b5f_B | 87 | Protein (cardosin A); hydrolase, aspartic proteina | 99.62 | |
| 1lya_A | 97 | Cathepsin D; lysosomal aspartic protease; HET: NAG | 95.71 | |
| 3s8i_A | 148 | Protein DDI1 homolog 1; protease, structural genom | 93.99 | |
| 2i1a_A | 148 | DNA damage-inducible protein DDI1; acid protease f | 93.76 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 91.52 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 90.19 | |
| 2k9y_A | 41 | Ephrin type-A receptor 2; receptor tyrosine kinase | 86.35 |
| >3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=380.61 Aligned_cols=290 Identities=22% Similarity=0.408 Sum_probs=228.2
Q ss_pred CCCcccccCCCC-CC------CC---CC------CCCCceEEEEe-CCCceEEEEEEEEEEEeCCcC------cccccce
Q 010556 1 MSNTYQALKCNP-DC------NC---DN------DRKECIYERRY-AEMSTSSGVLGVDVISFGNES------ELVPQRA 57 (507)
Q Consensus 1 ~SSTy~~v~C~~-~C------~C---~~------~~~~C~y~i~Y-~dgs~~sG~l~~D~vsig~~s------~i~~~~~ 57 (507)
+||||++++|.+ .| +| .+ .++.|.|++.| .|+++++|++++|+|+|++.+ .++++++
T Consensus 55 ~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~ 134 (413)
T 3vla_A 55 VSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRF 134 (413)
T ss_dssp CCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEE
T ss_pred CCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCE
Confidence 589999999996 25 23 21 14579999999 588888999999999997321 2577899
Q ss_pred EEEEEEeecCCCCCCCcceEEeecCCCCCHHHHHHHcCCCCccEEEeecCCCCCCceEEeCCCCCCC--------C-cee
Q 010556 58 VFGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGAMVLGGITPPP--------D-MVF 128 (507)
Q Consensus 58 ~FG~~~~~s~~~~~~~~DGILGLG~~~~S~l~qL~~qglI~~~FSl~L~~~~~~~G~L~fGgvD~s~--------~-~~~ 128 (507)
.|||++++........+|||||||++.+|++.||.+++.|+++||+||.+....+|.|+|||.|..+ . ..+
T Consensus 135 ~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~ 214 (413)
T 3vla_A 135 IFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTY 214 (413)
T ss_dssp EEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEE
T ss_pred EEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeE
Confidence 9999998743222356899999999999999999999999888999999865678999999998632 2 455
Q ss_pred eecCCCC------------CCceEEEEeEEEEcCEeeecCCceec----CCCcEEEecCcceEEechHHHHHHHHHHHHh
Q 010556 129 SHSDPFR------------SPYYNIELKELRVAGKPLKVSPRIFD----GGHGTVLDSGTTYAYLPGHAFAAFKDALIKE 192 (507)
Q Consensus 129 ~~~~~~~------------~~~w~V~l~sI~Vgg~~l~l~~~~f~----~~~~aiIDSGTs~i~LP~~v~~~l~~ai~~~ 192 (507)
+++.... ..+|.|+|++|.||++.+.+++..|. ++.++||||||++++||+++|++|.++|.++
T Consensus 215 tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 215 TPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp EECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred eecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 5543221 26999999999999999988766553 4578999999999999999999999999988
Q ss_pred hc--ccccccCCCCCccccccCCCccccccccCCCCeEEEEECC-CeEEEeCcCCceEEeeccCCcEEEEEEEcCC---C
Q 010556 193 TH--VLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGN-GQKLTLSPENYLFRHMKVSGAYCLGIFQNSD---S 266 (507)
Q Consensus 193 ~~--~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~g-g~~~~L~p~dYi~~~~~~~~~~Cl~i~~~~~---~ 266 (507)
+. .+.+..+ ...++.||+.....-...+..+|+|+|+|++ ++++.|++++|+++... +.+|+++..... +
T Consensus 295 ~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~ 370 (413)
T 3vla_A 295 SAARNITRVAS--VAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRT 370 (413)
T ss_dssp HHHTTCCEECC--CTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSS
T ss_pred hcccCCCcCCC--CCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCccc
Confidence 64 2333321 2346789864322111223589999999954 49999999999998753 679998877642 6
Q ss_pred CeeecHHHhheEEEEEECCCCEEEEEec
Q 010556 267 TTLLGGIVVRNTLVTYDRGNDKVGFWKT 294 (507)
Q Consensus 267 ~~ILG~~Flr~~yvVFD~en~rIGFA~s 294 (507)
.||||+.|||++|+|||++++|||||++
T Consensus 371 ~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 371 SIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 8999999999999999999999999985
|
| >3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} | Back alignment and structure |
|---|
| >1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A | Back alignment and structure |
|---|
| >1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
| >2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} | Back alignment and structure |
|---|
| >3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* | Back alignment and structure |
|---|
| >3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* | Back alignment and structure |
|---|
| >2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} | Back alignment and structure |
|---|
| >3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A | Back alignment and structure |
|---|
| >3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A | Back alignment and structure |
|---|
| >4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A | Back alignment and structure |
|---|
| >1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* | Back alignment and structure |
|---|
| >3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... | Back alignment and structure |
|---|
| >2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A | Back alignment and structure |
|---|
| >1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* | Back alignment and structure |
|---|
| >1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* | Back alignment and structure |
|---|
| >1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* | Back alignment and structure |
|---|
| >1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A | Back alignment and structure |
|---|
| >3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* | Back alignment and structure |
|---|
| >1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... | Back alignment and structure |
|---|
| >3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... | Back alignment and structure |
|---|
| >3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* | Back alignment and structure |
|---|
| >1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 | Back alignment and structure |
|---|
| >1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* | Back alignment and structure |
|---|
| >2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A | Back alignment and structure |
|---|
| >2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... | Back alignment and structure |
|---|
| >1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* | Back alignment and structure |
|---|
| >2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... | Back alignment and structure |
|---|
| >1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* | Back alignment and structure |
|---|
| >1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 | Back alignment and structure |
|---|
| >1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* | Back alignment and structure |
|---|
| >3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 507 | ||||
| d1t6ex_ | 381 | b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr | 2e-41 | |
| d2qp8a1 | 387 | b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum | 1e-31 | |
| d2apra_ | 325 | b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus | 5e-24 | |
| d3psga_ | 370 | b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI | 7e-24 | |
| g1lya.1 | 338 | b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) | 2e-23 | |
| d1eaga_ | 342 | b.50.1.2 (A:) Acid protease {Yeast (Candida albica | 1e-21 | |
| d1j71a_ | 334 | b.50.1.2 (A:) Acid protease {Yeast (Candida tropic | 2e-21 | |
| g1b5f.1 | 326 | b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin | 5e-20 | |
| d1mppa_ | 357 | b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] | 1e-19 | |
| g1htr.1 | 372 | b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens | 2e-19 | |
| d3cmsa_ | 323 | b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos | 3e-19 | |
| d1smra_ | 335 | b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu | 4e-19 | |
| d1am5a_ | 324 | b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo | 5e-19 | |
| d1dpja_ | 329 | b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha | 7e-18 | |
| d1qdma2 | 337 | b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase | 3e-17 | |
| d1izea_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o | 3e-17 | |
| d1miqa_ | 373 | b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e | 6e-17 | |
| d1hrna_ | 337 | b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho | 1e-16 | |
| d1bxoa_ | 323 | b.50.1.2 (A:) Acid protease {Fungus (Penicillium j | 5e-16 | |
| d1oewa_ | 330 | b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung | 6e-16 | |
| d2bjua1 | 329 | b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad | 1e-14 | |
| d1wkra_ | 340 | b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo | 1e-11 |
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Score = 150 bits (379), Expect = 2e-41
Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 32/327 (9%)
Query: 2 SNTYQALKC-NPDCNCDNDRKEC-IYERRYAEMSTSSGVLGVDVISFGNESELVPQRAV- 58
+N Y A C P C D K C Y + ++G L P V
Sbjct: 58 ANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVN 117
Query: 59 ----FGCENLETGDLYTQRADGIMGLGRGRLSVVDQLVEKGVISDSFSLCYGGMDVGGGA 114
C + + + G+ GL L++ Q+ +++ F LC G
Sbjct: 118 VGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAI 177
Query: 115 MVLGGITPPPDMVFSHSDPF----RSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170
G + P P SP + I + + V + V G G +L +
Sbjct: 178 FGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATG-GVMLST 236
Query: 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYD------DICFSGAGRDVSELSKT 224
Y L + DA K P +C+ +
Sbjct: 237 RLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA 296
Query: 225 FPQVDMVFGNGQKLTLSPENYLFRHMKVSGAYCLGIFQ--------NSDSTTLLGGIVVR 276
P V + G T++ +N + G C+ + +LGG +
Sbjct: 297 VPNVQLGLDGGSDWTMTGKNSMVDVK--QGTACVAFVEMKGVAAGDGRAPAVILGGAQME 354
Query: 277 NTLVTYDRGNDKVGFWK----TNCSEL 299
+ ++ +D ++GF + T C L
Sbjct: 355 DFVLDFDMEKKRLGFSRLPHFTGCGGL 381
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 | Back information, alignment and structure |
|---|
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 | Back information, alignment and structure |
|---|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 | Back information, alignment and structure |
|---|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 | Back information, alignment and structure |
|---|
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 | Back information, alignment and structure |
|---|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 | Back information, alignment and structure |
|---|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 | Back information, alignment and structure |
|---|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 | Back information, alignment and structure |
|---|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 | Back information, alignment and structure |
|---|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 | Back information, alignment and structure |
|---|
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 | Back information, alignment and structure |
|---|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 | Back information, alignment and structure |
|---|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 | Back information, alignment and structure |
|---|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 | Back information, alignment and structure |
|---|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 507 | |||
| d1j71a_ | 334 | Acid protease {Yeast (Candida tropicalis) [TaxId: | 100.0 | |
| d2apra_ | 325 | Acid protease {Bread mold (Rhizopus chinensis) [Ta | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1eaga_ | 342 | Acid protease {Yeast (Candida albicans) [TaxId: 54 | 100.0 | |
| d1dpja_ | 329 | Acid protease {Baker's yeast (Saccharomyces cerevi | 100.0 | |
| d1oewa_ | 330 | Endothiapepsin {Chestnut blight fungus (Endothia p | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1izea_ | 323 | Acid protease {Fungus (Aspergillus oryzae) [TaxId: | 100.0 | |
| d1smra_ | 335 | Chymosin (synonym: renin) {Mouse (Mus musculus) [T | 100.0 | |
| d1am5a_ | 324 | Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1bxoa_ | 323 | Acid protease {Fungus (Penicillium janthinellum), | 100.0 | |
| d1hrna_ | 337 | Chymosin (synonym: renin) {Human (Homo sapiens) [T | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1wkra_ | 340 | Acid protease {Irpex lacteus (Polyporus tulipifera | 100.0 | |
| g1lya.1 | 338 | Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2bjua1 | 329 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 99.97 | |
| g1b5f.1 | 326 | Plant acid proteinase, phytepsin {Cynara carduncul | 99.97 | |
| d3cmsa_ | 323 | Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId | 99.97 | |
| d1qdma2 | 337 | Plant acid proteinase, phytepsin {Barley (Hordeum | 99.97 |
| >d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Acid protease species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=100.00 E-value=1.1e-37 Score=316.78 Aligned_cols=245 Identities=18% Similarity=0.313 Sum_probs=203.4
Q ss_pred CCceEEEEeCCCceEEEEEEEEEEEeCCcCcccccceEEEEEEeecCCCCCCCcceEEeecCCCC--------CHHHHHH
Q 010556 21 KECIYERRYAEMSTSSGVLGVDVISFGNESELVPQRAVFGCENLETGDLYTQRADGIMGLGRGRL--------SVVDQLV 92 (507)
Q Consensus 21 ~~C~y~i~Y~dgs~~sG~l~~D~vsig~~s~i~~~~~~FG~~~~~s~~~~~~~~DGILGLG~~~~--------S~l~qL~ 92 (507)
..|.|++.|+++.+++|.++.|+++|++ ++++++.||++..... .+|++|||+... +++.+|.
T Consensus 76 ~~~~~~~~Y~~g~~~~G~~~~D~~~~g~---~~~~~~~f~~~~~~~~------~~GilGlg~~~~~~~~~~~~~~~~~l~ 146 (334)
T d1j71a_ 76 LNQDFSIEYGDLTSSQGSFYKDTVGFGG---ISIKNQQFADVTTTSV------DQGIMGIGFTADEAGYNLYDNVPVTLK 146 (334)
T ss_dssp EEEEEEEEBTTSCEEEEEEEEEEEEETT---EEEEEEEEEEEEEESS------SSCEEECSCGGGSSTTCCCCCHHHHHH
T ss_pred CCcCEEEEeCCCceEEEEEEeeEEEEee---eeccCceeeeeeeecc------ccCccccccccccccccccchhhHHHH
Confidence 4789999999988999999999999998 5788999999987764 689999998654 3899999
Q ss_pred HcCCCC-ccEEEeecCCCCCCceEEeCCCCCCC-CceeeecCCCCCCceEEEEeEEEEcCEeeecCCceecCCCcEEEec
Q 010556 93 EKGVIS-DSFSLCYGGMDVGGGAMVLGGITPPP-DMVFSHSDPFRSPYYNIELKELRVAGKPLKVSPRIFDGGHGTVLDS 170 (507)
Q Consensus 93 ~qglI~-~~FSl~L~~~~~~~G~L~fGgvD~s~-~~~~~~~~~~~~~~w~V~l~sI~Vgg~~l~l~~~~f~~~~~aiIDS 170 (507)
++|+|+ +.|++|+.+.+..+|.|+|||+|+.+ ...+.|.+.....+|.+.+++|.|++..+.. +..++|||
T Consensus 147 ~q~~i~~~~fs~~l~~~~~~~g~l~lGg~d~~~~~g~~~~~~~~~~~~~~v~l~~i~v~g~~~~~-------~~~aiiDS 219 (334)
T d1j71a_ 147 KQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST-------NADVVLDS 219 (334)
T ss_dssp HTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE-------EEEEEECT
T ss_pred hccccccceEEEEeccCCCCCceEEecccChhhcccceeEeeeccccceEEeeceEEECCEEecc-------cccccccC
Confidence 999997 67999999876778999999999987 3445565556778999999999999997752 34799999
Q ss_pred CcceEEechHHHHHHHHHHHHhhcccccccCCCCCccccccCCCccccccccCCCCeEEEEECCCeEEEeCcCCceEEee
Q 010556 171 GTTYAYLPGHAFAAFKDALIKETHVLKRIRGPDPNYDDICFSGAGRDVSELSKTFPQVDMVFGNGQKLTLSPENYLFRHM 250 (507)
Q Consensus 171 GTs~i~LP~~v~~~l~~ai~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~I~f~f~gg~~~~L~p~dYi~~~~ 250 (507)
||++++||+++|++|++++.+... .....+..+| | +..|+++|+|.+|++++|+|++|+++..
T Consensus 220 Gt~~~~lp~~~~~~l~~~~~~~~~------~~~~~~~~~~-------~----~~~p~i~f~f~~g~~~~i~~~~y~~~~~ 282 (334)
T d1j71a_ 220 GTTITYFSQSTADKFARIVGATWD------SRNEIYRLPS-------C----DLSGDAVFNFDQGVKITVPLSELILKDS 282 (334)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEEE------TTTTEEECSS-------S----CCCSEEEEEESTTCEEEEEGGGGEEECS
T ss_pred CCcceeccHHHHHHHHHHhCCEEc------CCCCeeeccc-------c----ccCCCceEEeCCCEEEEEChHHeEEecC
Confidence 999999999999999998854432 1111222233 1 4679999999878999999999998764
Q ss_pred ccCCcEEEEEEEcCCCCeeecHHHhheEEEEEECCCCEEEEEeccCCcccc
Q 010556 251 KVSGAYCLGIFQNSDSTTLLGGIVVRNTLVTYDRGNDKVGFWKTNCSELWR 301 (507)
Q Consensus 251 ~~~~~~Cl~i~~~~~~~~ILG~~Flr~~yvVFD~en~rIGFA~s~C~~~~~ 301 (507)
. +..|+..+.. .+.+|||.+|||++|++||+||+|||||+++|++..+
T Consensus 283 ~--~~~C~~~i~~-~~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~~~~~~ 330 (334)
T d1j71a_ 283 D--SSICYFGISR-NDANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSD 330 (334)
T ss_dssp S--SSCEEESEEE-CTTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCC
T ss_pred C--CCEEEEEecC-CCCcEECHHhhCcEEEEEECCCCEEEEEECCCCCcCC
Confidence 3 5678876665 4678999999999999999999999999999988654
|
| >d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} | Back information, alignment and structure |
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| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} | Back information, alignment and structure |
|---|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
| >d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} | Back information, alignment and structure |
|---|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
| >d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} | Back information, alignment and structure |
|---|
| >d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
| >d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} | Back information, alignment and structure |
|---|
| >d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|