Citrus Sinensis ID: 010594

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500------
MALLKQTPLTIARSNAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPYPYPTPNAKPETSFVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVKESRSICTCDCRRANFTSTTSLS
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccHHHHHHHcccccccccccccEEEEccccEEEEEEccHHHHHHHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHHccEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHcccccEEEccccccccHHHHHHHHcccEEEEccccccccccHHHHHHHcccEEEEEEcccccccccccccccEEEEEEccccccccHHHHHHccccHHHHHHHHHHHHHHcccEEEccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccccc
ccHHcccccEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHcccHHHHcccccccccccccccccccccHHccccHcccccccccccEEEEEEcccHHHcHHHHHHHccccccccccccccccccccccccccHHHHHHHHHccccccccccEEEEccHHHccEEEEEEEEEEEcccccccccHHHHHHHHHHHHcccHHHccccccEEEEEcccccHHHHHHHHHcccEEEcccccccEEEccccccccccEcccccccccccHHcccccccccccEEEEEcccccccccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEcccEcccccccccccEEEEEEHHHcccccHHHHHHHcccHHHHHHHHHHHHHHcccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccEEEccccccccccc
mallkqtpltiaRSNAKSRILLFTLFLFAFSLLFALFSltrnpysdpypyptpnakpetsFVASIERFLAQTSQRFRDDTVtsltedgvvrkfddVASKIErqrvyedsyyplslpiRVYVYEMPRKFTYDLLWLFRNtykdtsnltsngspvhrlIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEeadlfyipfFTTISFFLLEKQQCKALYREALKWvtdqpawkrsegrdhilpvhhpwsfksVRRYVKNAIWllpdmdstgnwykpgqvslekdlilpyvpnvdfcdvkcvseseskRSTLLFFRGRLKRNAGGKIRAKLVAELSSaegvvieegtagevgkaaaqngmrrsifclnpagdtpssaRLFDAIVsgcipvivsdelelpfegiLDYRKIALFvsssdatqpgyLLKFLRGISPAQIREMRRNLVQYSRhflysspaqplgpeDLVWRMIAGKLVNIKLhtrrsqrvvkesrsictcdcrranftsttsls
mallkqtpltiarsnAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPYPYPTPNAKPETSFVASIERFLAqtsqrfrddtvtsltedgvvrkfddvaskierqrvyedsyyplslPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWkrsegrdhilpvhhpwsfksvRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVseseskrstllffrgrlkrnagGKIRAKLVAELSsaegvvieegtageVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSssdatqpgyLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNiklhtrrsqrvvkesrsictcdcrranftsttsls
MALLKQTPLTIARSNAKSRIllftlflfafsllfalfsltRNPYSDPYPYPTPNAKPETSFVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVKESRSICTCDCRRANFTSTTSLS
**************NAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPY************FVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVKESRSICTCDCRRAN********
********************LLFTLFLFAFSLLFALFSLT***********************************************************************PLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKL***************CTCDCRRA*********
MALLKQTPLTIARSNAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPYPYPTPNAKPETSFVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHT************ICTCDCRRANFTSTTSLS
*****QTPLTIARSNAKSRILLFTLFLFAFSLLFALFSLTR***************************************************FDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVKESRSICTCDCRRAN********
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALLKQTPLTIARSNAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPYPYPTPNAKPETSFVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVKESRSICTCDCRRANFTSTTSLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query506 2.2.26 [Sep-21-2011]
Q6NMM8469 Probable glucuronoxylan g no no 0.662 0.714 0.233 1e-20
Q9ZUV3448 Probable glucuronoxylan g no no 0.640 0.723 0.244 1e-19
Q940Q8415 Probable beta-1,4-xylosyl no no 0.604 0.737 0.272 2e-19
Q33AH8417 Probable glucuronosyltran no no 0.616 0.748 0.247 3e-18
Q8S1X8415 Probable glucuronosyltran no no 0.586 0.715 0.254 5e-18
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.592 0.728 0.265 1e-17
Q8S1X7417 Probable glucuronosyltran no no 0.584 0.709 0.255 3e-17
Q10SX7427 Probable glucuronosyltran no no 0.632 0.749 0.236 6e-17
Q6H4N0434 Probable glucuronosyltran no no 0.527 0.615 0.282 9e-17
Q3EAR7470 Probable glycosyltransfer no no 0.535 0.576 0.257 2e-16
>sp|Q6NMM8|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1 Back     alignment and function desciption
 Score =  101 bits (252), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 170/390 (43%), Gaps = 55/390 (14%)

Query: 117 IRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESE 176
           +++YVY++P  +  D  W+  +  +  S+L +    +HR                     
Sbjct: 109 MKIYVYDLPASYNDD--WVTASD-RCASHLFAAEVAIHRA-------------------- 145

Query: 177 RLLKNVVRVRLQEEADLFYIPFFTTISFFLLEK----QQCKALYREALKWVTDQ-PAWKR 231
            LL + VR    +EAD F++P + + +F            ++L   A+ +++D  P W R
Sbjct: 146 -LLSSDVRTLDPDEADYFFVPVYVSCNFSTSNGFPSLSHARSLLSSAVDFLSDHYPFWNR 204

Query: 232 SEGRDHILPVHHPWSF-----------KSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEK 280
           S+G DH+    H +             + + +++K +I L     + G  YK     +E 
Sbjct: 205 SQGSDHVFVASHDFGACFHAMEDMAIEEGIPKFMKRSIIL----QTFGVKYKHPCQEVEH 260

Query: 281 DLILPYVPNVDFCDVKCVSESESKRSTLLFFRGRLK---RNAGGKIRAKLVAELSSAEGV 337
            +I PY+P          +    +R    FFRG+++   +N  G+  +K V      +  
Sbjct: 261 VVIPPYIPPESVQKAIEKAPVNGRRDIWAFFRGKMEVNPKNISGRFYSKGVRTAILKKFG 320

Query: 338 VIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFE 397
                       A  ++ + RS+FCL P G  P S RL ++ V GC+PV+++D ++LPF 
Sbjct: 321 GRRRFYLNRHRFAGYRSEIVRSVFCLCPLGWAPWSPRLVESAVLGCVPVVIADGIQLPFS 380

Query: 398 GILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQ--YSRHFLYSSPAQPL 455
             + + +I+L V+  D      L K L  ++   +  ++RNL +  + R  LY+    P+
Sbjct: 381 ETVQWPEISLTVAEKDVRN---LRKVLEHVAATNLSAIQRNLHEPVFKRALLYNV---PM 434

Query: 456 GPEDLVWRMIAGKLVNIKLHTRRSQRVVKE 485
              D  W ++      +   + R  RV+ +
Sbjct: 435 KEGDATWHILESLWRKLDDRSYRRSRVLSQ 464
Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1 Back     alignment and function description
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X7|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=2 SV=1 Back     alignment and function description
>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query506
255558009507 catalytic, putative [Ricinus communis] g 0.976 0.974 0.807 0.0
224144703505 predicted protein [Populus trichocarpa] 0.970 0.972 0.778 0.0
225461772513 PREDICTED: probable glucuronoxylan glucu 0.877 0.865 0.814 0.0
356544337494 PREDICTED: probable glucuronoxylan glucu 0.891 0.912 0.777 0.0
449453962518 PREDICTED: probable glucuronoxylan glucu 0.970 0.947 0.743 0.0
356538648502 PREDICTED: probable glucuronoxylan glucu 0.899 0.906 0.766 0.0
449520748517 PREDICTED: probable glucuronoxylan glucu 0.970 0.949 0.741 0.0
297807715510 exostosin family protein [Arabidopsis ly 0.954 0.947 0.719 0.0
357474287502 Exostosin family protein-like protein [M 0.913 0.920 0.753 0.0
15237870511 Exostosin family protein [Arabidopsis th 0.950 0.941 0.724 0.0
>gi|255558009|ref|XP_002520033.1| catalytic, putative [Ricinus communis] gi|223540797|gb|EEF42357.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/499 (80%), Positives = 437/499 (87%), Gaps = 5/499 (1%)

Query: 9   LTIARSNAKSRILLFTLFLFAFSLLFALFSLTRNPYSDPYPYPTPNAKPETSFVASIERF 68
           + I+ + ++S ILLFTL L AFSLLF LFSL+ +   +PYP P    KP TSF+AS+E F
Sbjct: 8   MMISSTRSRSPILLFTLSLLAFSLLFFLFSLSSSQTHNPYPSPNFTLKPVTSFLASLELF 67

Query: 69  LAQ----TSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVYVYEM 124
           L +    +S   RDDTV  + ED + R  D+     E  R+Y D YYPL  PIRVYVYEM
Sbjct: 68  LTKKSLSSSSSHRDDTVREVIEDDLHR-LDEKMFAKESARLYSDPYYPLQFPIRVYVYEM 126

Query: 125 PRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPESERLLKNVVR 184
           P KFTYDLLWLFRNTY+DT NLTSNGSPVHRLIEQHSIDYWLWADLI PE+ERLLK+VVR
Sbjct: 127 PNKFTYDLLWLFRNTYRDTVNLTSNGSPVHRLIEQHSIDYWLWADLIAPETERLLKSVVR 186

Query: 185 VRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHP 244
           V  QEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRS GRDHILPVHHP
Sbjct: 187 VYRQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSGGRDHILPVHHP 246

Query: 245 WSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVKCVSESESK 304
           WSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQV LEKDLILPYVPNVD CD KC SE+ESK
Sbjct: 247 WSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVFLEKDLILPYVPNVDLCDAKCASENESK 306

Query: 305 RSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGKAAAQNGMRRSIFCLN 364
           R+TLLFFRGRLKRNAGGKIRAKLVAELS AEGVV+EEGTAGE GKAAAQ GMR+SIFCL+
Sbjct: 307 RTTLLFFRGRLKRNAGGKIRAKLVAELSGAEGVVVEEGTAGEGGKAAAQTGMRKSIFCLS 366

Query: 365 PAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSDATQPGYLLKFL 424
           PAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIA+FVSSSDA QPG+L+KFL
Sbjct: 367 PAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIAVFVSSSDAIQPGWLIKFL 426

Query: 425 RGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIAGKLVNIKLHTRRSQRVVK 484
           + +SPAQ REM+RNLV+YSRHFLYSSPAQPLGPEDLVWRM+AGKLVNIKLHTRRSQRVVK
Sbjct: 427 KDVSPAQTREMQRNLVKYSRHFLYSSPAQPLGPEDLVWRMMAGKLVNIKLHTRRSQRVVK 486

Query: 485 ESRSICTCDCRRANFTSTT 503
           ESRS+CTCDC+RANFT  T
Sbjct: 487 ESRSVCTCDCKRANFTGPT 505

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224144703|ref|XP_002325382.1| predicted protein [Populus trichocarpa] gi|222862257|gb|EEE99763.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225461772|ref|XP_002285599.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356544337|ref|XP_003540609.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like [Glycine max] Back     alignment and taxonomy information
>gi|449453962|ref|XP_004144725.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538648|ref|XP_003537813.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase F8H-like [Glycine max] Back     alignment and taxonomy information
>gi|449520748|ref|XP_004167395.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297807715|ref|XP_002871741.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297317578|gb|EFH48000.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357474287|ref|XP_003607428.1| Exostosin family protein-like protein [Medicago truncatula] gi|355508483|gb|AES89625.1| Exostosin family protein-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|15237870|ref|NP_197191.1| Exostosin family protein [Arabidopsis thaliana] gi|9755690|emb|CAC01702.1| putative protein [Arabidopsis thaliana] gi|15810401|gb|AAL07088.1| unknown protein [Arabidopsis thaliana] gi|23296585|gb|AAN13125.1| unknown protein [Arabidopsis thaliana] gi|332004972|gb|AED92355.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query506
TAIR|locus:2148136511 AT5G16890 "AT5G16890" [Arabido 0.899 0.890 0.758 5.9e-192
TAIR|locus:2063494447 ARAD1 "AT2G35100" [Arabidopsis 0.780 0.883 0.370 1.2e-63
TAIR|locus:2155302443 ARAD2 "AT5G44930" [Arabidopsis 0.747 0.853 0.352 2.8e-57
TAIR|locus:2096439499 EDA5 "AT3G03650" [Arabidopsis 0.824 0.835 0.340 4.2e-56
TAIR|locus:2197639430 AT1G67410 "AT1G67410" [Arabido 0.707 0.832 0.349 3.7e-55
TAIR|locus:2019200461 AT1G74680 "AT1G74680" [Arabido 0.703 0.772 0.349 3.4e-54
TAIR|locus:2078327475 AT3G45400 "AT3G45400" [Arabido 0.760 0.810 0.340 1.5e-53
TAIR|locus:2026103477 AT1G34270 "AT1G34270" [Arabido 0.541 0.574 0.369 2.8e-41
TAIR|locus:2159198415 GUT1 "AT5G61840" [Arabidopsis 0.531 0.648 0.294 1.9e-19
TAIR|locus:2172676469 F8H "AT5G22940" [Arabidopsis t 0.581 0.626 0.261 4.1e-19
TAIR|locus:2148136 AT5G16890 "AT5G16890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1860 (659.8 bits), Expect = 5.9e-192, P = 5.9e-192
 Identities = 349/460 (75%), Positives = 394/460 (85%)

Query:    51 PTPNAKPETSFVASIERFLAQTSQRF----RDDTVTSLTEDGVVRKFDDVASKIERQRVY 106
             P P+ +PETSFV S+E FL   + +     RDDTV   ++D V RK D++  + E + + 
Sbjct:    49 PNPSDRPETSFVTSLEHFLIYKAPKLSLPVRDDTVRGESDDDV-RKLDEMVFERENRWLN 107

Query:   107 EDSYYPLSLPIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWL 166
             ED  YP+  PI+VYVYEMP+KFT+DLLWLF NTYK+TSN TSNGSPVHRLIEQHSIDYWL
Sbjct:   108 EDPGYPVEFPIKVYVYEMPKKFTFDLLWLFHNTYKETSNATSNGSPVHRLIEQHSIDYWL 167

Query:   167 WADLIVPESERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQ 226
             WADLI PESER LK+VVRV+ Q++AD FY+PFFTTISFFLLEKQQCKALYREALKWVTDQ
Sbjct:   168 WADLISPESERRLKSVVRVQKQQDADFFYVPFFTTISFFLLEKQQCKALYREALKWVTDQ 227

Query:   227 PAWKRSEGRDHILPVHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPY 286
             PAWKRSEGRDHI P+HHPWSFKSVR++VKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPY
Sbjct:   228 PAWKRSEGRDHIFPIHHPWSFKSVRKFVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPY 287

Query:   287 VPNVDFCDVKCVSESESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAGE 346
             VPNVD CD KC+SES   R+TLLFFRGRLKRNAGGKIRAKL AELS  + ++I EGTAGE
Sbjct:   288 VPNVDICDTKCLSESAPMRTTLLFFRGRLKRNAGGKIRAKLGAELSGIKDIIISEGTAGE 347

Query:   347 VGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIA 406
              GK AAQ GMRRS+FCL PAGDTPSSARLFDAIVSGCIPVIVSDELE PFEGILDY+K+A
Sbjct:   348 GGKLAAQRGMRRSLFCLCPAGDTPSSARLFDAIVSGCIPVIVSDELEFPFEGILDYKKVA 407

Query:   407 LFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQYSRHFLYSSPAQPLGPEDLVWRMIA 466
             + VSSSDA QPG+L+  LR ++P Q++ ++ NL QYSRHFLYSSPAQPLGPEDL WRMIA
Sbjct:   408 VLVSSSDAIQPGWLVNHLRSLTPFQVKGLQNNLAQYSRHFLYSSPAQPLGPEDLTWRMIA 467

Query:   467 GKLVNIKLHTRRSQRVVKESRSICTCDCRRANFTSTTSLS 506
             GKLVNIKLHTRRSQRVVK SRSIC CDC R+N T++ SLS
Sbjct:   468 GKLVNIKLHTRRSQRVVKGSRSICRCDCWRSNSTASNSLS 507
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2063494 ARAD1 "AT2G35100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155302 ARAD2 "AT5G44930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096439 EDA5 "AT3G03650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197639 AT1G67410 "AT1G67410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019200 AT1G74680 "AT1G74680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078327 AT3G45400 "AT3G45400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026103 AT1G34270 "AT1G34270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159198 GUT1 "AT5G61840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172676 F8H "AT5G22940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_XIX0071
hypothetical protein (505 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query506
pfam03016292 pfam03016, Exostosin, Exostosin family 1e-67
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  219 bits (559), Expect = 1e-67
 Identities = 98/320 (30%), Positives = 146/320 (45%), Gaps = 39/320 (12%)

Query: 116 PIRVYVYEMPRKFTYDLLWLFRNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIVPES 175
            ++VYVY++PR+F      L  +   +TS           L  Q++ +  L   ++   S
Sbjct: 4   GLKVYVYDLPRRFN-----LLEDVLPETS---------WYLTHQYAAESILHKSIL--NS 47

Query: 176 ERLLKNVVRVRLQEEADLFYIPFFTTISFFLLEKQQCKALYREALKWVTDQPAWKRSEGR 235
                +       +EADLF++PF+T++S       +   L  E ++W+   P W RS GR
Sbjct: 48  RCRTLD------PDEADLFFVPFYTSLSVGTN-AVERDLLPSELVEWLESLPYWNRSGGR 100

Query: 236 DHILPVHHPW---SFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDF 292
           DHI+   HP+   +F  +     N I  +      G  +   Q     D+ LP   + + 
Sbjct: 101 DHIIVNSHPFGGSAFDRLPALNNNTILAVLA----GGGFSEDQFRPGFDVPLPAYFHPNS 156

Query: 293 CDVKCVS-ESESKRSTLLFFRGRLKRNAG----GKIRAKLVAELSSAEGVVIEEGTAGEV 347
            D         SKR TLLFF G  +          IR  L+ E  ++     E G     
Sbjct: 157 VDDLESDGMPPSKRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDFQCE-GNQSCG 215

Query: 348 GKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIAL 407
                   +R S FCL P GDTP+S RLFDA+ +GCIPVI+SD  ELPFE ++D+ K ++
Sbjct: 216 NPENYMELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSV 275

Query: 408 FVSSSDATQPGYLLKFLRGI 427
            V  +D      L + LR I
Sbjct: 276 RVPENDIPS---LPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 506
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.85
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.41
cd03814364 GT1_like_2 This family is most closely related to 96.12
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 95.9
cd03801374 GT1_YqgM_like This family is most closely related 95.85
cd03820348 GT1_amsD_like This family is most closely related 95.77
cd03822366 GT1_ecORF704_like This family is most closely rela 95.37
cd03794394 GT1_wbuB_like This family is most closely related 95.18
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 95.12
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 94.53
cd03818396 GT1_ExpC_like This family is most closely related 94.39
cd03821375 GT1_Bme6_like This family is most closely related 93.76
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 93.66
cd03806419 GT1_ALG11_like This family is most closely related 93.52
cd03823359 GT1_ExpE7_like This family is most closely related 93.51
cd03808359 GT1_cap1E_like This family is most closely related 93.45
cd03800398 GT1_Sucrose_synthase This family is most closely r 93.31
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 93.15
cd03809365 GT1_mtfB_like This family is most closely related 92.87
cd03817374 GT1_UGDG_like This family is most closely related 92.66
cd03811353 GT1_WabH_like This family is most closely related 92.57
cd04962371 GT1_like_5 This family is most closely related to 92.48
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 92.43
cd03819355 GT1_WavL_like This family is most closely related 92.37
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 92.13
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 91.56
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 91.03
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 90.73
cd03804351 GT1_wbaZ_like This family is most closely related 90.51
cd03798377 GT1_wlbH_like This family is most closely related 90.04
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 89.24
cd03805392 GT1_ALG2_like This family is most closely related 88.68
cd03825365 GT1_wcfI_like This family is most closely related 88.64
PRK10307412 putative glycosyl transferase; Provisional 88.56
cd04955363 GT1_like_6 This family is most closely related to 87.89
cd03807365 GT1_WbnK_like This family is most closely related 87.68
cd03816415 GT1_ALG1_like This family is most closely related 87.36
cd04951360 GT1_WbdM_like This family is most closely related 86.64
cd03795357 GT1_like_4 This family is most closely related to 86.13
PLN02949463 transferase, transferring glycosyl groups 85.79
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 85.66
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 84.93
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 84.3
cd04949372 GT1_gtfA_like This family is most closely related 83.71
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 83.02
cd03802335 GT1_AviGT4_like This family is most closely relate 82.54
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 81.45
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 81.09
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=2e-59  Score=503.01  Aligned_cols=350  Identities=30%  Similarity=0.487  Sum_probs=278.3

Q ss_pred             cCCCCCCeEEEecCCchhhHHHHHhhhhc---CCC---CCCCcCC---CCCcc---cccccccchhhHHhhccchH---H
Q 010594          111 YPLSLPIRVYVYEMPRKFTYDLLWLFRNT---YKD---TSNLTSN---GSPVH---RLIEQHSIDYWLWADLIVPE---S  175 (506)
Q Consensus       111 ~p~~~~~~IYVYdLPp~FN~~lL~~c~~~---~~~---~~~~~~~---g~p~~---~l~~q~~~~~W~~td~~~~e---~  175 (506)
                      +..|.+.+||||+||+.||.+++..|...   +..   +|.+..+   +....   +-..++..++|+.+|||+.|   |
T Consensus        67 ~~~~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~  146 (464)
T KOG1021|consen   67 QAICAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFH  146 (464)
T ss_pred             hhcccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHH
Confidence            44789999999999999999999988654   222   3333222   11111   01124556899999999998   6


Q ss_pred             HHh--hcCccccCCCCCccEEEEeeccchhhhh--h-c-----HHHHHHHHHHHHHHHhcCccccccCCCCeeeecCCCC
Q 010594          176 ERL--LKNVVRVRLQEEADLFYIPFFTTISFFL--L-E-----KQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPW  245 (506)
Q Consensus       176 erL--l~s~~rT~DPeeAdlFyVP~y~~l~~~~--~-~-----~~~~~~l~~~~v~~L~~~P~W~R~gGrDHf~v~~~~w  245 (506)
                      .++  ..++|||.||++||+||||||+++++..  . .     ....+.+..+++.|+++||||||++|+|||||++|+|
T Consensus       147 ~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~  226 (464)
T KOG1021|consen  147 NRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDW  226 (464)
T ss_pred             HHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcc
Confidence            888  4789999999999999999999998632  1 1     1346677888999999999999999999999999999


Q ss_pred             ChhhhhhhhhchhhcccCcCCCCCcccCCCccccCccccCCCCCCCCCCcc----cccCCCCCCceEEEeecccccCCCC
Q 010594          246 SFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDFCDVK----CVSESESKRSTLLFFRGRLKRNAGG  321 (506)
Q Consensus       246 ~f~~~r~~~~nai~ll~~~~~~~~~~~pg~~~~~kDVvIPy~~~~~~~~~~----~~~~~~~~R~~L~~FaG~~~~~~~~  321 (506)
                      +....+..+++++.+++++.+++ ++..++..-.+||+|||++.+|+....    .......+|++|+||+|++   .++
T Consensus       227 ~~~~~~~~~~~~~~~i~~~~n~a-~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~~~  302 (464)
T KOG1021|consen  227 GDFRRRSDWGASISLIPEFCNGA-LLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---AGG  302 (464)
T ss_pred             hheeeccchhhHHHHHHhhCCcc-eeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---cCC
Confidence            87665556777777778877653 445543333399999999888765443    3345668999999999986   578


Q ss_pred             hhHHHHHHHHhCCCC-eEEEc---CCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCceeEEeeCCcccCCC
Q 010594          322 KIRAKLVAELSSAEG-VVIEE---GTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFE  397 (506)
Q Consensus       322 ~iR~~L~~~~~~~~~-~~i~~---~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCIPViisd~~~LPFe  397 (506)
                      .||+.|+++|++.++ +....   +..++.++..|++.|++|+|||||+||++||+|+||||++|||||||+|++++||+
T Consensus       303 ~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~  382 (464)
T KOG1021|consen  303 QIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFG  382 (464)
T ss_pred             cHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcC
Confidence            999999999999332 33333   33334567899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEEEcCCCcCCcchHHHHHcCCCHHHHHHHHHHHhh-hcceeEEccCCCCCCchhHHHHHHHh
Q 010594          398 GILDYRKIALFVSSSDATQPGYLLKFLRGISPAQIREMRRNLVQ-YSRHFLYSSPAQPLGPEDLVWRMIAG  467 (506)
Q Consensus       398 ~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~~~~~~D~~~~~i~~  467 (506)
                      +++||++|||+|+++++++.  |.++|.+|+.+++.+||+++++ +.+||++..+ ++...+||++.++.+
T Consensus       383 ~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~-~~~~~~da~~~~~~~  450 (464)
T KOG1021|consen  383 DVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPP-GPPKRGDAFHMILHS  450 (464)
T ss_pred             CCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCC-CCCCcchhHHHHHhh
Confidence            99999999999998888872  5999999999999999999996 8888888875 444556777777666

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query506
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.9 bits (126), Expect = 2e-07
 Identities = 84/573 (14%), Positives = 157/573 (27%), Gaps = 196/573 (34%)

Query: 11  IARSNAKSRI-LLFTLFL---------FAFSLLFALFSLTRNPYSDPYPYPTPNAKPETS 60
           I   +A S    LF   L         F   +L   +    +P       P+        
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM---TRM 111

Query: 61  FVASIERFLAQTSQRFRDDTVTSLTEDGVVRKFDDVASKIERQRVYEDSYYPLSLPIRVY 120
           ++   +R L   +Q F    V+ L      + +  +   +   R  ++          V 
Sbjct: 112 YIEQRDR-LYNDNQVFAKYNVSRL------QPYLKLRQALLELRPAKN----------VL 154

Query: 121 VYEMP------------------RKFTYDLLWL-FRNTYKDTS------NLTSNGSPVHR 155
           +  +                    K  + + WL  +N     +       L     P   
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 156 LIEQHSIDYWLWADLIVPESERLLKN--------VVR-VRLQEEADLFYIPFFTTISFFL 206
               HS +  L    I  E  RLLK+        V+  V+  +  + F +          
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL---------- 264

Query: 207 LEKQQCKALYREALKWVTDQPAWKRSEGRDHILPVHHPWSFKS------VRRYVKNAIWL 260
                CK L     K VTD  +   +    HI   HH  +         + +Y+      
Sbjct: 265 ----SCKILLTTRFKQVTDFLS---AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 261 LP-------------------DMDST-GNWYKPG--------QVSLE-----------KD 281
           LP                   D  +T  NW            + SL              
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 282 L-ILP---YVP---------NVDFCDV-----KCVSES----ESKRSTL----LFFRGRL 315
           L + P   ++P         +V   DV     K    S    + K ST+    ++   ++
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV 437

Query: 316 KRNAGGKIRAKLVAELSSAEGVVIEEGTAGEVGK----------AAAQNGMRRSIFCLNP 365
           K      +   +V   +  +    ++     + +             ++  R ++F    
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF---- 493

Query: 366 AGDTPSSARLF------------DAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSSD 413
                    +F            D+        I++   +L F     Y+    ++  +D
Sbjct: 494 -------RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF-----YKP---YICDND 538

Query: 414 ATQPGY---LLKFLRGISPAQIREMRRNLVQYS 443
                    +L FL  I    I     +L++ +
Sbjct: 539 PKYERLVNAILDFLPKIEENLICSKYTDLLRIA 571
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query506
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.25
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 95.94
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 94.96
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 94.23
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 92.66
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 91.97
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 91.9
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 91.81
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 90.4
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 90.01
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 89.98
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 85.44
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 85.3
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 84.2
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 83.77
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 80.66
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.25  E-value=0.00073  Score=59.76  Aligned_cols=129  Identities=12%  Similarity=0.196  Sum_probs=77.0

Q ss_pred             ceEEEeecccccCCCChhHHHHHHHHhCCC-CeEEEcCCCCCcchhhHHhccccCcEEEccCCCCCCCchHHHHHHhCce
Q 010594          306 STLLFFRGRLKRNAGGKIRAKLVAELSSAE-GVVIEEGTAGEVGKAAAQNGMRRSIFCLNPAGDTPSSARLFDAIVSGCI  384 (506)
Q Consensus       306 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~-~~~i~~~~~~~~~~~~~~~~m~~S~FCL~P~Gds~ts~RlfDAi~aGCI  384 (506)
                      ++-+.+.|.      +..++.+.+...... .+.+  +..   +..+..+.++.+..++.|.-.......++|||.+|||
T Consensus        32 ~~~l~i~G~------g~~~~~~~~~~~~~~~~v~~--g~~---~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~v  100 (166)
T 3qhp_A           32 DIVLLLKGK------GPDEKKIKLLAQKLGVKAEF--GFV---NSNELLEILKTCTLYVHAANVESEAIACLEAISVGIV  100 (166)
T ss_dssp             GEEEEEECC------STTHHHHHHHHHHHTCEEEC--CCC---CHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCC
T ss_pred             CeEEEEEeC------CccHHHHHHHHHHcCCeEEE--eec---CHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCC
Confidence            566777774      233444444433322 2332  221   2456788999999999998665567899999999999


Q ss_pred             eEEeeCCcccCCCCCCCCCcEEEEEcCCCcCCcc-hHHHHHcCCCHHHHHHHHHHHhhhcceeEEcc
Q 010594          385 PVIVSDELELPFEGILDYRKIALFVSSSDATQPG-YLLKFLRGISPAQIREMRRNLVQYSRHFLYSS  450 (506)
Q Consensus       385 PViisd~~~LPFe~vlDw~~fSV~I~e~dv~~~~-~L~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~  450 (506)
                      |||..+..- ...+++.-...  .++..|...-. .|.+++.  .++...+|.++..+..++|-|..
T Consensus       101 Pvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~--~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          101 PVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLE--NKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             EEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHC---
T ss_pred             cEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHCChhh
Confidence            999944321 11122232333  44444543311 1334444  78889999999888778877764
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query506
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.11
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 90.43
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 87.98
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 85.75
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 83.15
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.11  E-value=0.0032  Score=62.36  Aligned_cols=123  Identities=15%  Similarity=0.152  Sum_probs=77.4

Q ss_pred             CCCCceEEEeecccccCCCChhHHHHHHHHhCCCCeEEEcCCCC-Cc-chhhHHhccccCcEEEccCCC---CCCCchHH
Q 010594          302 ESKRSTLLFFRGRLKRNAGGKIRAKLVAELSSAEGVVIEEGTAG-EV-GKAAAQNGMRRSIFCLNPAGD---TPSSARLF  376 (506)
Q Consensus       302 ~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~m~~S~FCL~P~Gd---s~ts~Rlf  376 (506)
                      ...|+.+.+|.-+   +.++.+|.++++++.+...+........ .+ ....-.+.|++.+|+||..-.   +..+-.++
T Consensus       176 ~~~K~kFcs~v~S---n~~~~~R~~~~~~L~k~~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~  252 (349)
T d2nzwa1         176 DPLKRGFASFVAS---NPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKII  252 (349)
T ss_dssp             CTTSSEEEEECCS---CCCCHHHHHHHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHH
T ss_pred             ccccCceEEEEEc---CCCCchHHHHHHHHhccCeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHH
Confidence            4567777766633   2246799999999998776654332111 11 122345788999999997653   56789999


Q ss_pred             HHHHhCceeEEeeCC-c--ccCCCCCCCCCcEEEEEcCCCcCCcchHHHHHcCCC--HHHHHHHH
Q 010594          377 DAIVSGCIPVIVSDE-L--ELPFEGILDYRKIALFVSSSDATQPGYLLKFLRGIS--PAQIREMR  436 (506)
Q Consensus       377 DAi~aGCIPViisd~-~--~LPFe~vlDw~~fSV~I~e~dv~~~~~L~~iL~~Is--~e~i~~Mr  436 (506)
                      ||+.+|||||..++. +  .+|-      ..|   |...|......+.+.|..++  ++.+.+|-
T Consensus       253 da~~~g~iPIy~G~~~i~~~f~~------~sf---I~~~df~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         253 DAYFSHTIPIYWGSPSVAKDFNP------KSF---VNVHDFKNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HHHHTTCEEEEESCTTGGGTSCG------GGS---EEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             HHHhCCeEEEEECCCcHHHcCCC------ccE---EEhhhCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            999999999999974 3  2332      233   33333333223666676664  55555554
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure