Citrus Sinensis ID: 010692

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500---
Protein Sequence
MLSTSSNRSDDVVDVDQNSQPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccHHHccccHHHHHHHHHHccccccccEEEEEEcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHEEEEEccHHHHHHHHHHHHHcccccccccHccccccccccccccccHHHHHcccccccHHHHHHHHccccccccccHcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccc
Coil and Loop (DISEMBL)
mlstssnrsddvvdvdqnsqpnlpiqqsksqslshrppplaeAEMAtrslsedspptpswftpkrgdfklnnfqdgvlSSAFMVGLLVASPIFAslakshnpfrliGVGLSVWTFatagcgssfdFWSIAICRMLVGVGEasfislaapfiddnapvpqktAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIkplqlkgfapaesgkAQVVASVSegseasnlndhvsedisdqasERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGaysywgpkagyniyhmsnadmmFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLvfatqapvnyVCLHSVKPSLRALSMAISTVSIhifgdvpssplvgvlQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKfnedgenqisldskanmkpllegngdnl
Flexible Loop (DISEMBL)
mlstssnrsddvvdvdqnsqpnlpiqqsksqslshrpPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEgseasnlndhvsedisdqaSERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENqisldskanmkpllegngdnl
Low Complexity Region (SEG)
MLSTSSNRSddvvdvdQNSQPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTgvalgyvyggvvgSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQvvasvsegseasNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFggvtivcgivgtisggFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL
Disordered region (IsUnstruct)
****************************************************************RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA*************************************************QLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKF***************************
Disordered Region (DISOPRED)
**********************************HRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDK****************************
Disordered Region (DISEMBL)
*************DVDQNSQPNLP**********************************SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVS*********RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL
Disordered Region (DISPRO)
**********DVVDVDQNSQPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ******************SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFN**************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSTSSNRSDDVVDVDQNSQPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	503	2.2.26 [Sep-21-2011]
Q9FLG8	484	Probable sphingolipid tra	yes	no	0.799	0.830	0.683	1e-167
F4IKF6	510	Probable sphingolipid tra	no	no	0.836	0.825	0.658	1e-163
Q6NMN6	492	Probable sphingolipid tra	no	no	0.789	0.806	0.606	1e-145
Q5XGK0	526	Protein spinster homolog	N/A	no	0.671	0.642	0.277	2e-26
A8WGF7	526	Protein spinster homolog	yes	no	0.675	0.646	0.265	5e-26
Q9GQQ0	605	Protein spinster OS=Droso	yes	no	0.669	0.557	0.271	1e-24
Q8IVW8	549	Protein spinster homolog	yes	no	0.731	0.670	0.24	3e-23
A2SWM2	504	Protein spinster homolog	yes	no	0.729	0.728	0.249	3e-23
Q91VM4	549	Protein spinster homolog	yes	no	0.731	0.670	0.237	3e-22
Q9D232	514	Protein spinster homolog	no	no	0.751	0.735	0.257	2e-21

>sp|Q9FLG8|SPNS2_ARATH Probable sphingolipid transporter spinster homolog 2 OS=Arabidopsis thaliana GN=At5g64500 PE=2 SV=1

 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/433 (68%), Positives = 337/433 (77%), Gaps = 31/433 (7%)

Query: 65  RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 124
           +GDF L+NF+DGVLSSAFMVGLLVASPIFASLAKS NPFRLIGVGLS+WT A  GCG SF
Sbjct: 81  QGDFNLSNFEDGVLSSAFMVGLLVASPIFASLAKSVNPFRLIGVGLSIWTLAVIGCGLSF 140

Query: 125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184
           DFWSI ICRM VGVGEASF+SLAAPFIDDNAP  QK+AWL++FYMCIPTG A GYVYGGV
Sbjct: 141 DFWSITICRMFVGVGEASFVSLAAPFIDDNAPHDQKSAWLAVFYMCIPTGYAFGYVYGGV 200

Query: 185 VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN 244
           VGS L WR AFWGEAILMLPFAVL FVIKPL LKGFAP ++GK +            NLN
Sbjct: 201 VGSVLPWRAAFWGEAILMLPFAVLGFVIKPLHLKGFAPDDTGKPR----------TDNLN 250

Query: 245 DHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 304
                          +  +G        S   +D K+LL +KVYV N+LGYIAYNFV+GA
Sbjct: 251 ---------------VLPVGYG-----FSAVMKDLKLLLVDKVYVTNILGYIAYNFVLGA 290

Query: 305 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364
           YSYWGPKAGYNIY M NADM+FGGVT+VCGIVGT+SGG ILD M ATISNAFK+LS +TF
Sbjct: 291 YSYWGPKAGYNIYKMENADMIFGGVTVVCGIVGTLSGGVILDYMDATISNAFKVLSVSTF 350

Query: 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 424
           +GAI C  AFC  S+Y FLALF VGELLVFATQ PVN++ LH VKPSLR L+MA+STVSI
Sbjct: 351 IGAIFCFAAFCFKSMYAFLALFAVGELLVFATQGPVNFIVLHCVKPSLRPLAMAMSTVSI 410

Query: 425 HIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQI 484
           HIFGDVPSSPLVGVLQD+VNNWR T+L LT + F AA IW +GIFL S+D++NED E   
Sbjct: 411 HIFGDVPSSPLVGVLQDYVNNWRVTSLVLTFVLFPAAAIWSIGIFLNSVDRYNEDSEPD- 469

Query: 485 SLDSKANMKPLLE 497
           ++  ++   PLL+
Sbjct: 470 AVTRESTAAPLLQ 482

Probable sphingolipid transporter that plays a central role in endosomes and/or lysosomes storage.
Arabidopsis thaliana (taxid: 3702)

>sp|F4IKF6|SPNS3_ARATH Probable sphingolipid transporter spinster homolog 3 OS=Arabidopsis thaliana GN=At2g22730 PE=3 SV=1

 Score =  574 bits (1479), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 291/442 (65%), Positives = 340/442 (76%), Gaps = 21/442 (4%)

Query: 46  ATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL 105
           +TRS ++    T +  T  +G F L+NF+DGVLSS+FMVGLL+ASPIFASLAK     RL
Sbjct: 77  STRSCNDKGKCTLA--TGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFASLAK-----RL 129

Query: 106 IGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 165
           IGVGL+VWT A  GCGSSF FW I +CRM VGVGEASFISLAAPFIDDNAP  QK AWL 
Sbjct: 130 IGVGLTVWTIAVLGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDDNAPQEQKAAWLG 189

Query: 166 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 225
           +FYMCIP+GVALGYVYGG VG H +WRYAFWGEA+LM PFAVL F++KPLQLKG      
Sbjct: 190 LFYMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVLMAPFAVLGFLMKPLQLKG------ 243

Query: 226 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 285
                 +   + +    +++ +  D  + + E S  S   + F    + F++D KVL +E
Sbjct: 244 ------SETLKNNNRLQVDNEIEHDQFEVSIETSKSSYANAVF-KSFTGFAKDMKVLYKE 296

Query: 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFIL 345
           KV+VVNVLGY++YNFVIGAYSYWGPKAGYNIY M NADM+FG VTI+CGIVGT+SGGFIL
Sbjct: 297 KVFVVNVLGYVSYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGFIL 356

Query: 346 DQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 405
           D++ ATI NAFKLLS ATFLGA+ C TAF L SLYGF+ALF +GELLVFATQAPVNYVCL
Sbjct: 357 DRVTATIPNAFKLLSGATFLGAVFCFTAFTLKSLYGFIALFALGELLVFATQAPVNYVCL 416

Query: 406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465
           H VKPSLR LSMAISTV+IHIFGDVPSSPLVG++QDH+N+WRKTTL LTSI FLAA IWF
Sbjct: 417 HCVKPSLRPLSMAISTVAIHIFGDVPSSPLVGIVQDHINSWRKTTLILTSILFLAAAIWF 476

Query: 466 VG-IFLKSIDKFNEDGENQISL 486
           +G I L S    +E    QI L
Sbjct: 477 IGKINLNSFYSNDESFLVQIKL 498

Probable sphingolipid transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NMN6|SPNS1_ARATH Probable sphingolipid transporter spinster homolog 1 OS=Arabidopsis thaliana GN=At5g65687 PE=1 SV=1

 Score =  515 bits (1326), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 251/414 (60%), Positives = 312/414 (75%), Gaps = 17/414 (4%)

Query: 65  RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 124
           +G+F L NF+DG+LSSAFMVGLLVASPIFA L+K  NPF+LIGVGL+VWT A  GCG S+
Sbjct: 72  QGEFNLTNFEDGLLSSAFMVGLLVASPIFAGLSKRFNPFKLIGVGLTVWTIAVIGCGFSY 131

Query: 125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184
           +FW IA+ RM VGVGEASFISLAAP+IDD+APV +K  WL +FYMCIP GVALGYV+GG 
Sbjct: 132 NFWMIAVFRMFVGVGEASFISLAAPYIDDSAPVARKNFWLGLFYMCIPAGVALGYVFGGY 191

Query: 185 VGSHLNWRYAFWGEAILMLPFAVLAFVIKP-LQLKGFAPAESGKAQVVASVSEGSEASNL 243
           +G+HL WR+AF+ EAI M  F +L+F IKP  QLKGFA  +S K          ++A   
Sbjct: 192 IGNHLGWRWAFYIEAIAMAVFVILSFCIKPPQQLKGFADKDSKKPSTSIETVAPTDAE-- 249

Query: 244 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303
                   + Q   ++ KS       N +  F +D K L  EKV++VNVLGYI YNFVIG
Sbjct: 250 --------ASQIKTKTPKS------KNLVVLFGKDLKALFSEKVFIVNVLGYITYNFVIG 295

Query: 304 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363
           AYSYWGPKAG+ IY M NADM+FGG+TI+CGI+GT+ G ++LD++ AT+SN FKLL+A+T
Sbjct: 296 AYSYWGPKAGFGIYKMKNADMIFGGLTIICGIIGTLGGSYVLDRINATLSNTFKLLAAST 355

Query: 364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423
            LGA  C TAF + ++Y F+ALF VGE+L+FA QAPVN+VCLH V+P+LR LSMA STV 
Sbjct: 356 LLGAAFCFTAFLMKNMYAFIALFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTVL 415

Query: 424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFN 477
           IHI GDVPSSPL G +QDH+ NWRK+TL +TSI FLAA IW +GIF+ S+D+ N
Sbjct: 416 IHILGDVPSSPLYGKMQDHLKNWRKSTLIITSILFLAAIIWGIGIFMNSVDRSN 469

Probable sphingolipid transporter that plays a central role in endosomes and/or lysosomes storage.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XGK0|SPNS1_XENLA Protein spinster homolog 1 OS=Xenopus laevis GN=spns1 PE=2 SV=1

 Score =  120 bits (302), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 173/396 (43%), Gaps = 58/396 (14%)

Query: 68  FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGSSFD 125
           F +++   G++ + F+   +  +P+F  L   +N   ++ VG+S W+  T  +   S+  
Sbjct: 90  FNISDSNSGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCVGISFWSLVTLLSSFVSNQY 149

Query: 126 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185
           FW   I R LVGVGEAS+ ++A   I D     Q+T  LS FY   P G  LGY+    V
Sbjct: 150 FWLFLITRGLVGVGEASYSTIAPTIIADLFLADQRTRMLSFFYFATPVGCGLGYI----V 205

Query: 186 GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 245
           GS +      W  A+ + P   L  V+  +                              
Sbjct: 206 GSEMTSAAGDWHWALRVTPGLGLLAVLLLI------------------------------ 235

Query: 246 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 305
            V+E+    A ER        R L   S +S D K LL+   ++++  G+    FV GA 
Sbjct: 236 FVAEEPPRGALERK-----TDRPLTNTS-WSSDMKALLKNPSFILSTFGFTTVAFVTGAL 289

Query: 306 SYWGP----KAGYNIYH-------MSNAD--MMFGGVTIVCGIVGTISGGFILDQMGATI 352
           + WGP    ++   IY        + N D  M+FGG+T + GI+G ++G  I  +   T 
Sbjct: 290 ALWGPTYLMRSRMVIYKSKPCEGGICNYDDSMIFGGITCITGILGVLTGVEISKRYRKTN 349

Query: 353 SNAFKLLSAATFLGAISCL---TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK 409
             A  L+ A   + +   L    AF  +SL        +GE L+    A V  + L+ V 
Sbjct: 350 PRADPLVCAVGMISSAPFLFLSLAFADTSLVATYVFIFIGETLLSLNWALVADILLYVVI 409

Query: 410 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445
           P+ R+ + A+  V  H+ GD  S  L+GV+ D +  
Sbjct: 410 PTRRSTAEALQIVVSHLLGDAGSPYLIGVISDQIQK 445

Sphingolipid transporter.

Xenopus laevis (taxid: 8355)

>sp|A8WGF7|SPNS1_XENTR Protein spinster homolog 1 OS=Xenopus tropicalis GN=spns1 PE=2 SV=2

 Score =  119 bits (298), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 174/400 (43%), Gaps = 60/400 (15%)

Query: 65  RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS 122
           + D+ +++   G++ + F+   +  +P+F  L   +N   ++ +G+S W+  T  +   S
Sbjct: 87  KEDYHISDSNSGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCIGISFWSLVTLLSSFVS 146

Query: 123 SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 182
              FW   + R LVGVGEAS+ ++A   I D     Q++  LS FY   P G  LGY+ G
Sbjct: 147 KQYFWLFLLTRGLVGVGEASYSTIAPTIIADLFLADQRSRMLSFFYFATPVGCGLGYIAG 206

Query: 183 GVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 241
             V S   +W +A                                  +V   +   +   
Sbjct: 207 SKVTSTAGDWHWAL---------------------------------RVTPGLGLVAVLL 233

Query: 242 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301
            +   V+++    A ER        R L   S FS D K LL+   ++++  G+    FV
Sbjct: 234 LI--FVAKEPPRGALERK-----SDRPLTNTSWFS-DVKALLKNPSFILSTFGFTTVAFV 285

Query: 302 IGAYSYWGP----KAGYNIYH-------MSNAD--MMFGGVTIVCGIVGTISGGFILDQM 348
            GA + WGP    ++   IY        + N D  M+FGG+T V G++G ++G  I  + 
Sbjct: 286 TGALALWGPTYLMRSRRVIYKTEPCQGGICNYDDSMIFGGITCVTGVLGVLTGVEISKRY 345

Query: 349 GATISNAFKLLSAATFLGAISCL---TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 405
             T   A  L+ A   + +   L    AF  +SL    A   +GE L+    A V  + L
Sbjct: 346 RKTNPRADPLVCAVGMISSAPFLYLSLAFADTSLVATYAFIFIGETLLSLNWALVADILL 405

Query: 406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445
           + V P+ R+ + A+  V  H+ GD  S  L+GV+ D +  
Sbjct: 406 YVVIPTRRSTAEALQIVVSHLLGDAGSPYLIGVISDQIQK 445

Sphingolipid transporter.

Xenopus tropicalis (taxid: 8364)

>sp|Q9GQQ0|SPIN_DROME Protein spinster OS=Drosophila melanogaster GN=spin PE=1 SV=1

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 174/398 (43%), Gaps = 61/398 (15%)

Query: 61  FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC 120
            T  R DF + N   G+L + F++  +V +PIF  L   ++   ++ VG+ +W+  T   
Sbjct: 138 LTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLG 197

Query: 121 GSSFDF-WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 179
                F W IA  R LVG+GEAS+ ++A   I D      ++  L++FY  IP G  LGY
Sbjct: 198 SFMKQFGWFIAF-RALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGY 256

Query: 180 VYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 237
           + G    +HL  +WR+A     IL +    L  +IK                 V   SEG
Sbjct: 257 IVGSKT-AHLANDWRWALRVTPILGIVAVFLILLIK---------------DPVRGHSEG 300

Query: 238 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 297
           S   NL                           + + + QD K L++ + ++++  G+  
Sbjct: 301 SH--NL---------------------------EATTYKQDIKALVRNRSFMLSTAGFTC 331

Query: 298 YNFVIGAYSYWGPKAGYNIYHMS--NADMM-------FGGVTIVCGIVGTISGGFILDQM 348
             FV GA ++WGP   Y    M   N +++       FG +T++ G++G   G F+   +
Sbjct: 332 VAFVAGALAWWGPSFIYLGMKMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQYL 391

Query: 349 GATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCL 405
                 A  ++ A   L +   LT  CL   S+  G  AL   G+L +    A V  + L
Sbjct: 392 VKRYPTADPVICAFGLLVSAPLLTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILL 451

Query: 406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 443
           + V P+ R+ + A   +  H  GD  S  LVG + + +
Sbjct: 452 YVVVPTRRSTAEAFQILISHALGDAGSPYLVGAISEAI 489

Probable sphingolipid transporter that plays a central role in endosomes and/or lysosomes storage. Involved in TGF-beta-mediated synaptic growth regulation both pre- and postsynaptically via its function in endosomal storage regulation. Also required during oogenesis by regulating yolk spheres storage.

Drosophila melanogaster (taxid: 7227)

>sp|Q8IVW8|SPNS2_HUMAN Protein spinster homolog 2 OS=Homo sapiens GN=SPNS2 PE=1 SV=2

 Score =  110 bits (275), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 180/450 (40%), Gaps = 82/450 (18%)

Query: 68  FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
           F + +   G+L S F+   +VA+PIF  L    N   ++  G+  W+  T    SSF   
Sbjct: 133 FGVKDRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFS--SSFIPQ 190

Query: 125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183
             FW + + R LVG+GEAS+ ++A   I D      +T  LS+FY  IP G  LGY+ G 
Sbjct: 191 QYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGS 250

Query: 184 VVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 242
            V     +W +A     +L +    L  ++ P   +G A                     
Sbjct: 251 SVKQAAGDWHWALRVSPVLGMITGTLILILVPATKRGHA--------------------- 289

Query: 243 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302
                 + + DQ   R              + + +D K L++ + YV + L   A +F  
Sbjct: 290 ------DQLGDQLKAR--------------TSWLRDMKALIRNRSYVFSSLATSAVSFAT 329

Query: 303 GAYSYWGPKAGYNIYHMSNA-------------DMMFGGVTIVCGIVGTISGGFILDQMG 349
           GA   W P   +    +                 ++FG +T   G +G ++G        
Sbjct: 330 GALGMWIPLYLHRAQVVQKTAETCNSPPCGAKDSLIFGAITCFTGFLGVVTGAGATRWCR 389

Query: 350 ATISNAFKLLSAATFLGA---ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 406
                A  L+ A   LG+   I  +     SS+ G      VGE L+F+  A    + ++
Sbjct: 390 LKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFVGETLLFSNWAITADILMY 449

Query: 407 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT---------------- 450
            V P+ RA ++A+ + + H+ GD  S  L+G + D +    K +                
Sbjct: 450 VVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKDSPLWEFLSLGYALMLCP 509

Query: 451 --LALTSIFFLAAGIWFVGIFLKSIDKFNE 478
             + L  +FFLA  ++FV    ++  + N+
Sbjct: 510 FVVVLGGMFFLATALFFVSDRARAEQQVNQ 539

Sphingolipid transporter required for migration of myocardial precursors. Transports sphingosine 1-phosphate (S1P), a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. Mediates the export of S1P from cells in the extraembryonic yolk syncytial layer (YSL), thereby regulating myocardial precursor migration.

Homo sapiens (taxid: 9606)

>sp|A2SWM2|SPNS2_DANRE Protein spinster homolog 2 OS=Danio rerio GN=spns2 PE=1 SV=2

 Score =  110 bits (274), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 184/453 (40%), Gaps = 86/453 (18%)

Query: 67  DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-- 124
            FK+ +   G+L + F+   +VA+PIF  L    N   ++  G+  W+  T    SSF  
Sbjct: 85  QFKVGDSSAGLLQTVFICSFMVAAPIFGYLGDRFNRKIILSCGIFFWSAVTLL--SSFIT 142

Query: 125 --DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 182
              +W + + R LVG+GE+S+ S++   I D     ++T  LS+FY+ IP G  LGY+ G
Sbjct: 143 KEYYWLLVLSRCLVGIGESSYSSISPTIIGDLFTNNKRTVMLSVFYLAIPLGSGLGYILG 202

Query: 183 GV---VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 239
            +    G H  W +A     +L L    L  +                      VSE   
Sbjct: 203 SIAKDAGGH--WYWALRVSPMLGLTAGTLILIF---------------------VSEPKR 239

Query: 240 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299
            S          +DQ   R          L   + +  D K L + + YV + L   A +
Sbjct: 240 GS----------ADQPGGR----------LKTRTSWVCDMKALAKNRSYVFSSLASAAVS 279

Query: 300 FVIGAYSYWGPK-----------AGYNIYH--MSNADMMFGGVTIVCGIVGTISGGFILD 346
           F  GA+  W P+           A    Y    S   ++FG +T V G++G + G     
Sbjct: 280 FATGAFGIWIPQYLVRAQVVQKSAESCTYQPCSSRDSLIFGAITCVTGLLGVVIGAVTTR 339

Query: 347 QMGATISNAFKLLSAATFLGA---ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 403
                   A  L+ A + LG+   I  +      S+ G      +GE L+F   A    +
Sbjct: 340 LCRQKTERADPLVCAVSMLGSAIFICLIFVVAKKSIVGAYICIFIGETLLFLNWAITADI 399

Query: 404 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-------WRKTTLA---- 452
            ++ V P+ RA ++A    + H+ GD  S  L+G++ D +         W+  +L     
Sbjct: 400 LMYVVIPTRRATAVAFQGFTSHLLGDAGSPYLIGLISDSLQESYATSEIWQFLSLGYALM 459

Query: 453 -------LTSIFFLAAGIWFVGIFLKSIDKFNE 478
                  L  +FFLA  ++F+    K+  + N+
Sbjct: 460 LCPFVIVLGGMFFLATALFFLDDRDKAAKQVNQ 492

Sphingolipid transporter required for migration of myocardial precursors. Transports sphingosine 1-phosphate (S1P), a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. Mediates the export of S1P from cells in the extraembryonic yolk syncytial layer (YSL), thereby regulating myocardial precursor migration.

Danio rerio (taxid: 7955)

>sp|Q91VM4|SPNS2_MOUSE Protein spinster homolog 2 OS=Mus musculus GN=Spns2 PE=2 SV=2

 Score =  107 bits (266), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 179/450 (39%), Gaps = 82/450 (18%)

Query: 68  FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-- 125
           F + +   G+L S F+   +VA+PIF  L    N   ++  G+  W+  T    SSF   
Sbjct: 133 FGVKDRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFS--SSFIPQ 190

Query: 126 --FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183
             FW + + R LVG+GEAS+ ++A   I D      +T  LS+FY  IP G  LGY+ G 
Sbjct: 191 QYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGS 250

Query: 184 VVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 242
            V     +W +A     +L +    L  ++ P   +G A    G+               
Sbjct: 251 SVKQAAGDWHWALRVSPVLGMITGTLILILVPATKRGHADQLGGQ--------------- 295

Query: 243 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302
                                     L   + + +D K L++ + YV + L   A +F  
Sbjct: 296 --------------------------LKARTSWLRDMKALIRNRSYVFSSLATSAVSFAT 329

Query: 303 GAYSYWGP------KAGYNIYHMSNA-------DMMFGGVTIVCGIVGTISGGFILDQMG 349
           GA   W P      +         N+        ++FG +T   G +G ++G        
Sbjct: 330 GALGMWIPLYLHRAQVVQKTAETCNSPPCGAKDSLIFGAITCFTGFLGVVTGAGATRWCR 389

Query: 350 ATISNAFKLLSAATFLGA---ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 406
                A  L+ A   LG+   I  +     +S+ G      VGE L+F+  A    + ++
Sbjct: 390 LRTQRADPLVCAVGMLGSAIFICLIFVAAKTSIVGAYICIFVGETLLFSNWAITADILMY 449

Query: 407 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT---------------- 450
            V P+ RA ++A+ + + H+ GD  S  L+G + D +    K +                
Sbjct: 450 VVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKDSPLWEFLSLGYALMLCP 509

Query: 451 --LALTSIFFLAAGIWFVGIFLKSIDKFNE 478
             + L  +FFLA  ++F+    K+  + N+
Sbjct: 510 FVVVLGGMFFLATALFFLSDRAKAEQQVNQ 539

Sphingolipid transporter required for migration of myocardial precursors. Transports sphingosine 1-phosphate (S1P), a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. Mediates the export of S1P from cells in the extraembryonic yolk syncytial layer (YSL), thereby regulating myocardial precursor migration.

Mus musculus (taxid: 10090)

>sp|Q9D232|SPNS3_MOUSE Protein spinster homolog 3 OS=Mus musculus GN=Spns3 PE=2 SV=1

 Score =  103 bits (258), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 184/458 (40%), Gaps = 80/458 (17%)

Query: 68  FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
           F +++   G+L + F+  LLV++P+F  L   +N   ++  G+ +W+   AG  SSF   
Sbjct: 80  FHISDSHAGLLQTVFISCLLVSAPVFGYLGDRYNRKAILSFGILLWS--GAGLSSSFISY 137

Query: 125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183
              W   + R  VG G AS+ ++A   + D     Q+T  L++FY+ IP G  LGYV G 
Sbjct: 138 QYSWLFFLSRGFVGTGAASYSTIAPTVLGDLFVKDQRTCALAVFYIFIPVGSGLGYVLGS 197

Query: 184 VVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 242
            V     NWR+     A+ ++P                                 + A  
Sbjct: 198 TVAELTGNWRW-----ALRLMP------------------------------CLDAMALA 222

Query: 243 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302
           L   +  D+   A+E+     GE       S + +D + L +   +V + LG  A  FV 
Sbjct: 223 LLILLVPDVPRGAAEKQ----GEVAVRAPRSSWCEDVRYLGRNWSFVFSTLGVTAIAFVT 278

Query: 303 GAYSYWGPKAGY--NIYH-----------MSNADMMFGGVTIVCGIVGTISGGFILDQMG 349
           GA  +W PK  +   + H            S   ++FG +T+  GI+G + G     +  
Sbjct: 279 GALGFWAPKFLFEARVVHGLQLPCFQEQCHSQDSLIFGALTVATGIIGVMLGAEASRRYK 338

Query: 350 ATISNAFKLLSAATFLGAISCL-TAFCLSSL-----YGFLALFTVGELLVFATQAPVNYV 403
                A  L+ A++      CL  A  L+S      Y FLAL   GELL+    A V  +
Sbjct: 339 KVNPRAEPLICASSLFATAPCLYLALILASRTLLASYVFLAL---GELLLSCNWAVVADI 395

Query: 404 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG----VLQ--------DHVNNWRKTTL 451
            L  V P  R  + A+     H+ GD  S  L G    VLQ         H  + + + L
Sbjct: 396 LLSVVVPRCRGTAEALQITVAHVLGDAGSPYLTGLISSVLQAERPDSYLQHFLSLQHSFL 455

Query: 452 ALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSK 489
                  L  G + +       D+       + +LDSK
Sbjct: 456 CCAFAIVLGGGFFLLTALHLEKDQARARQPGKGTLDSK 493

Sphingolipid transporter.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
255576025	505	transporter, putative [Ricinus communis]	0.890	0.887	0.723	0.0
359480514	510	PREDICTED: protein spinster homolog 1-li	0.898	0.886	0.753	0.0
297735860	534	unnamed protein product [Vitis vinifera]	0.898	0.846	0.753	0.0
255554517	541	transporter, putative [Ricinus communis]	0.940	0.874	0.643	0.0
357485271	497	Spinster-like protein [Medicago truncatu	0.874	0.885	0.664	0.0
356546730	532	PREDICTED: protein spinster homolog 1-li	0.926	0.875	0.618	1e-179
356531403	496	PREDICTED: protein spinster homolog 1-li	0.872	0.885	0.659	1e-179
356519493	530	PREDICTED: protein spinster homolog 1-li	0.928	0.881	0.621	1e-179
357164805	606	PREDICTED: protein spinster homolog 1-li	0.858	0.712	0.690	1e-177
224105833	468	sugar transporter/spinster transmembrane	0.836	0.899	0.643	1e-177

>gi|255576025|ref|XP_002528908.1| transporter, putative [Ricinus communis] gi|223531662|gb|EEF33488.1| transporter, putative [Ricinus communis]

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/496 (72%), Positives = 398/496 (80%), Gaps = 48/496 (9%)

Query: 48  RSLSEDSPPTPSWFTPKR------------------------------------------ 65
           R+ + DS   PSWFTPKR                                          
Sbjct: 3   RTSTNDSSSDPSWFTPKRLLMLFCVINMINYVDRGAIASNGVNGSIRTCDEKGICNSGSG 62

Query: 66  --GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 123
             GDF LNNFQDGVLSSAFMVGLL+ASPIFASLAKSHNPFRLIGVGLSVWTFA AGCGSS
Sbjct: 63  IQGDFNLNNFQDGVLSSAFMVGLLLASPIFASLAKSHNPFRLIGVGLSVWTFAAAGCGSS 122

Query: 124 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183
           FDFWSIAICRMLVGVGEASFISLAAPFIDDNAP  QKTAWL+ FYMCIPTGVALGYVYGG
Sbjct: 123 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPAAQKTAWLATFYMCIPTGVALGYVYGG 182

Query: 184 VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 243
            VGS+ NWRYAFWGEA+LMLPFAVL F +KPLQLKGFAPAES KA + +S+   + AS  
Sbjct: 183 FVGSNFNWRYAFWGEALLMLPFAVLGFAMKPLQLKGFAPAESKKA-LTSSIE--ANASIT 239

Query: 244 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303
            D+ +EDIS +A + S K  GE   L+QLSQFS+D KVLL +KVYVVNVLGYI+YNFVIG
Sbjct: 240 EDNGNEDISSRAFKAS-KLKGEFTILHQLSQFSKDMKVLLVDKVYVVNVLGYISYNFVIG 298

Query: 304 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363
           AYSYWGPKAGYNIYHMSNADMMFGGVTI+CGI+GT++GGFILD+M ATISNAFKLLS AT
Sbjct: 299 AYSYWGPKAGYNIYHMSNADMMFGGVTIICGILGTLAGGFILDRMNATISNAFKLLSGAT 358

Query: 364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423
           FLGAI C +AFCL +LYGF+ LF+VGELLVFATQAPVNYVCLH VKP LR LSMAISTVS
Sbjct: 359 FLGAIFCFSAFCLKNLYGFIILFSVGELLVFATQAPVNYVCLHCVKPGLRPLSMAISTVS 418

Query: 424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQ 483
           IHIFGDVPSSPLVGVLQDH+NNWR+T+L LT++ F+AAGIWFVG+FLK +D  NEDGENQ
Sbjct: 419 IHIFGDVPSSPLVGVLQDHINNWRETSLILTAVLFIAAGIWFVGVFLKGVDMSNEDGENQ 478

Query: 484 ISLDSKANMKPLLEGN 499
           IS + K +M+PLLE N
Sbjct: 479 ISANVKGSMEPLLEEN 494

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480514|ref|XP_002273321.2| PREDICTED: protein spinster homolog 1-like [Vitis vinifera]

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/459 (75%), Positives = 389/459 (84%), Gaps = 7/459 (1%)

Query: 48  RSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 107
           ++ SE    TP   +  +GDF L+NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG
Sbjct: 49  KTCSESGVCTPG--SGIQGDFNLSNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 106

Query: 108 VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 167
           VGLS WTFATAGCGSSFDFWSIAI RMLVGVGEASF+SLAAPFIDDNAPV QKTAWL+MF
Sbjct: 107 VGLSFWTFATAGCGSSFDFWSIAIFRMLVGVGEASFVSLAAPFIDDNAPVTQKTAWLAMF 166

Query: 168 YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 227
           YMCIPTG+ALGYVYGG VG H NWRYAFWGEAILMLPFAVL FV+KPLQLKGFAPAES K
Sbjct: 167 YMCIPTGIALGYVYGGFVGEHFNWRYAFWGEAILMLPFAVLGFVMKPLQLKGFAPAES-K 225

Query: 228 AQVVASVSEGSEASNLNDHV---SEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284
              V   +EG   SN+N  V   +E IS+ AS ++ KS G  +  NQ  +F  D K+LL 
Sbjct: 226 NATVGPETEGPGLSNVNGGVLIRNELISNNASNKASKSRGAFKMCNQFPRFLIDMKMLLL 285

Query: 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFI 344
           +KVYVVNVLGY++YNFVIGAYSYWGPKAGYNIYHM+NADMMFGG+TIVCGI+GT++GG+I
Sbjct: 286 DKVYVVNVLGYVSYNFVIGAYSYWGPKAGYNIYHMNNADMMFGGITIVCGILGTLAGGYI 345

Query: 345 LDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 404
           LD M ATISNAFKLLS ATFLGAI C  +FCL  LYGF+ALF+VGELLVFATQAPVNYVC
Sbjct: 346 LDCMDATISNAFKLLSGATFLGAIFCFISFCLKGLYGFIALFSVGELLVFATQAPVNYVC 405

Query: 405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 464
           LH V+PSLR LSMA+STV+IHIFGDVPSSPLVG+LQDHVNNWR+TTL LTS+ FLA+GIW
Sbjct: 406 LHCVRPSLRPLSMAMSTVAIHIFGDVPSSPLVGILQDHVNNWRETTLILTSVLFLASGIW 465

Query: 465 FVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL 503
           F+G+FL S+D+F  D ENQ S+ SKA MKPLLEG  D +
Sbjct: 466 FLGVFLDSVDRFKLDSENQ-SVQSKATMKPLLEGEDDEM 503

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735860|emb|CBI18614.3| unnamed protein product [Vitis vinifera]

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/459 (75%), Positives = 389/459 (84%), Gaps = 7/459 (1%)

Query: 48  RSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 107
           ++ SE    TP   +  +GDF L+NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG
Sbjct: 73  KTCSESGVCTPG--SGIQGDFNLSNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 130

Query: 108 VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 167
           VGLS WTFATAGCGSSFDFWSIAI RMLVGVGEASF+SLAAPFIDDNAPV QKTAWL+MF
Sbjct: 131 VGLSFWTFATAGCGSSFDFWSIAIFRMLVGVGEASFVSLAAPFIDDNAPVTQKTAWLAMF 190

Query: 168 YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 227
           YMCIPTG+ALGYVYGG VG H NWRYAFWGEAILMLPFAVL FV+KPLQLKGFAPAES K
Sbjct: 191 YMCIPTGIALGYVYGGFVGEHFNWRYAFWGEAILMLPFAVLGFVMKPLQLKGFAPAES-K 249

Query: 228 AQVVASVSEGSEASNLNDHV---SEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284
              V   +EG   SN+N  V   +E IS+ AS ++ KS G  +  NQ  +F  D K+LL 
Sbjct: 250 NATVGPETEGPGLSNVNGGVLIRNELISNNASNKASKSRGAFKMCNQFPRFLIDMKMLLL 309

Query: 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFI 344
           +KVYVVNVLGY++YNFVIGAYSYWGPKAGYNIYHM+NADMMFGG+TIVCGI+GT++GG+I
Sbjct: 310 DKVYVVNVLGYVSYNFVIGAYSYWGPKAGYNIYHMNNADMMFGGITIVCGILGTLAGGYI 369

Query: 345 LDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 404
           LD M ATISNAFKLLS ATFLGAI C  +FCL  LYGF+ALF+VGELLVFATQAPVNYVC
Sbjct: 370 LDCMDATISNAFKLLSGATFLGAIFCFISFCLKGLYGFIALFSVGELLVFATQAPVNYVC 429

Query: 405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 464
           LH V+PSLR LSMA+STV+IHIFGDVPSSPLVG+LQDHVNNWR+TTL LTS+ FLA+GIW
Sbjct: 430 LHCVRPSLRPLSMAMSTVAIHIFGDVPSSPLVGILQDHVNNWRETTLILTSVLFLASGIW 489

Query: 465 FVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGNGDNL 503
           F+G+FL S+D+F  D ENQ S+ SKA MKPLLEG  D +
Sbjct: 490 FLGVFLDSVDRFKLDSENQ-SVQSKATMKPLLEGEDDEM 527

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554517|ref|XP_002518297.1| transporter, putative [Ricinus communis] gi|223542517|gb|EEF44057.1| transporter, putative [Ricinus communis]

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/524 (64%), Positives = 388/524 (74%), Gaps = 51/524 (9%)

Query: 26  QQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKR-------------------- 65
           +Q K  S S  P P  +A+MA +  +  S P PSWFTP+R                    
Sbjct: 8   KQVKPLSSSEEPNPSRDAQMA-KVPTPSSAPAPSWFTPRRLLVIFCIINLINYVDRGAIA 66

Query: 66  -----------------------GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 102
                                  GDF LNNF+DGVLSSAFMVGLLVASPIFASLAKS NP
Sbjct: 67  SNGVNGNRRTCTSGTCTSGSGIQGDFNLNNFEDGVLSSAFMVGLLVASPIFASLAKSFNP 126

Query: 103 FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 162
           FRLIGVGLSVWT A  GCG S +FWSI ICRM VGVGEASFISLAAPFIDDNAPV QKTA
Sbjct: 127 FRLIGVGLSVWTLAVVGCGFSINFWSITICRMFVGVGEASFISLAAPFIDDNAPVAQKTA 186

Query: 163 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 222
           WL++FYMCIP+G A GYVYGG+VG H NWR+AFWGEAILMLPF VL F++KPLQLKGFAP
Sbjct: 187 WLAIFYMCIPSGYAFGYVYGGLVGDHANWRWAFWGEAILMLPFVVLGFLMKPLQLKGFAP 246

Query: 223 AESGKA--QVVASVSE-----GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 275
           AES KA   V  +VSE      S     N  V E+++D++ + S  S   +  LNQ S+F
Sbjct: 247 AESKKALTSVETAVSEVQDTETSAGKGENLSVKEELNDKSPKPSCMSRYATFSLNQFSRF 306

Query: 276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGI 335
            +D K LL EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY+M+NADM+FGG+TIVCGI
Sbjct: 307 IKDMKALLVEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYNMTNADMIFGGITIVCGI 366

Query: 336 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 395
           +GT++GG+ILD M +TI NAFKLLS ATFLGAI C +AFC  S+Y FLALF +GELLVFA
Sbjct: 367 LGTMAGGYILDYMTSTIPNAFKLLSVATFLGAIFCFSAFCFKSMYVFLALFAIGELLVFA 426

Query: 396 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 455
           TQ PVNY+CLH VKPS+R LSMA+S VSIHIFGDVPSSPLVGVLQD +NNWR T L LT+
Sbjct: 427 TQGPVNYICLHCVKPSMRPLSMAMSIVSIHIFGDVPSSPLVGVLQDKINNWRLTALILTA 486

Query: 456 IFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGN 499
           I F AA IWF+GIFLKS+DKFNE+ E+Q+++  ++N  PLLEG 
Sbjct: 487 ILFPAAFIWFIGIFLKSVDKFNEESEHQVAVTDRSNTTPLLEGK 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485271|ref|XP_003612923.1| Spinster-like protein [Medicago truncatula] gi|355514258|gb|AES95881.1| Spinster-like protein [Medicago truncatula]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/492 (66%), Positives = 371/492 (75%), Gaps = 52/492 (10%)

Query: 55  PPTPSWFTPKR--------------------------------------------GDFKL 70
           PP PSWFTPKR                                            GDF L
Sbjct: 8   PPNPSWFTPKRLLIIFCIINLINYVDRGAIASNGVNGTLETCTESGVCTAGTGIQGDFNL 67

Query: 71  NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 130
           +NFQDGVLSSAFMVGLL+ASPIFASLAKSHNPFRLIGVGLSVWTFA AGCGSSFDFWSIA
Sbjct: 68  SNFQDGVLSSAFMVGLLIASPIFASLAKSHNPFRLIGVGLSVWTFAVAGCGSSFDFWSIA 127

Query: 131 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190
           ICRMLVGVGEASFISLAAPFIDDNAPV QKTAWL+ FYMCIP G ALGYVYGG+VGS  N
Sbjct: 128 ICRMLVGVGEASFISLAAPFIDDNAPVAQKTAWLATFYMCIPAGTALGYVYGGLVGSQFN 187

Query: 191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 250
           WR AFWGEAI MLPF +L F+IKPLQLKGF P ES + +   + +E + + N +D +  +
Sbjct: 188 WRVAFWGEAIFMLPFPILGFLIKPLQLKGFGPMESKQTR---TSNETNVSENGDDGILAE 244

Query: 251 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 310
             DQA  R  K    S+  NQ ++F  D + LL E+VYV+NVLGYIAYNFVIGAYSYWGP
Sbjct: 245 --DQAFIRGSKL--TSKLGNQFTRFLNDMQELLHERVYVINVLGYIAYNFVIGAYSYWGP 300

Query: 311 KAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 370
           KAGY+IYHMSNAD++FGG+TIVCGI GT++GG ILD+M +TISNAFK+LS ATFLGAI C
Sbjct: 301 KAGYSIYHMSNADLLFGGITIVCGIFGTLAGGLILDKMSSTISNAFKILSGATFLGAIFC 360

Query: 371 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 430
           L AF    L+GF+ LF+VGELL+FATQAPVNYV L  VKPSLR LSMAISTVSIHIFGDV
Sbjct: 361 LVAFLFKGLFGFIILFSVGELLIFATQAPVNYVSLRCVKPSLRPLSMAISTVSIHIFGDV 420

Query: 431 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDS-K 489
           PS+PLVGVLQDH+N+WRKT++ LTSIFFLAAG+WF+G FLKS D FN+D E   S  + +
Sbjct: 421 PSAPLVGVLQDHINDWRKTSICLTSIFFLAAGVWFIGTFLKSDDLFNKDDEEDESTTTLR 480

Query: 490 ANMKPLLEGNGD 501
              KPLLEG  D
Sbjct: 481 GVRKPLLEGIND 492

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546730|ref|XP_003541776.1| PREDICTED: protein spinster homolog 1-like [Glycine max]

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 323/522 (61%), Positives = 377/522 (72%), Gaps = 56/522 (10%)

Query: 26  QQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKR-------------------- 65
           Q   SQ      P L E  ++T        PT SWFTPKR                    
Sbjct: 3   QDDHSQVKPKPSPQLVEPRISTMI------PTASWFTPKRLLAIFCVINLLNYVDRGAIA 56

Query: 66  ------------------------GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 101
                                   GDF LNNF+DGVLSSAFMVGLLVASPIFASLAKS N
Sbjct: 57  SNGVNGSKGTCTEGGTCTSGSGIQGDFNLNNFEDGVLSSAFMVGLLVASPIFASLAKSVN 116

Query: 102 PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 161
           PFRLIGVGLSVWT AT  CG SF+FWSI+ICRMLVGVGEASFISLAAPFIDDNAPV QKT
Sbjct: 117 PFRLIGVGLSVWTLATLCCGFSFNFWSISICRMLVGVGEASFISLAAPFIDDNAPVTQKT 176

Query: 162 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221
           AWL++FYMCIP+G ALGYVYGG+VGSHL WRYAFW E++ M+PFA+    +KPLQL+GF 
Sbjct: 177 AWLAIFYMCIPSGYALGYVYGGLVGSHLGWRYAFWVESLFMVPFAISGLFMKPLQLRGFV 236

Query: 222 PAESGKA---QVVASVSEGSEASNLNDH---VSEDISDQASERSIKSIGESRFLNQLSQF 275
           PA+S K    + VAS  +  EASN  D    +  ++ D++S    KS   ++   + S+F
Sbjct: 237 PADSKKTLTPETVASGVQVMEASNGKDEPLSLKAELRDKSSNDHSKSKSVTQIFEKFSRF 296

Query: 276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGI 335
             D K LL +KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM++AD++FGG+TIVCGI
Sbjct: 297 LNDMKELLLDKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMTDADLIFGGITIVCGI 356

Query: 336 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 395
           VGT++GGF+LD M  T+SNAFKLLS  TF+GA  C  AF   S+YGFLALF++GELLVFA
Sbjct: 357 VGTLAGGFVLDYMSNTLSNAFKLLSITTFIGAAFCFGAFLFRSMYGFLALFSIGELLVFA 416

Query: 396 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 455
           TQ PVNYVCL  VKPSLR LSMA+STV IHIFGDVPSSPLVGVLQD++NNWR T L LTS
Sbjct: 417 TQGPVNYVCLRCVKPSLRPLSMAMSTVVIHIFGDVPSSPLVGVLQDNINNWRTTALILTS 476

Query: 456 IFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLE 497
           I FLAAGIWF+GIFL ++D+F+ED E+Q+S   ++N  PLL+
Sbjct: 477 ILFLAAGIWFIGIFLHTVDRFDEDSEHQVSNVERSNTMPLLQ 518

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531403|ref|XP_003534267.1| PREDICTED: protein spinster homolog 1-like [Glycine max]

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/491 (65%), Positives = 368/491 (74%), Gaps = 52/491 (10%)

Query: 56  PTPSWFTPKR--------------------------------------------GDFKLN 71
           P PSWFTPKR                                            GDF LN
Sbjct: 9   PNPSWFTPKRLLMIFCLINMLNYVDRGAIASNGVNGSLATCTDSGICTGGSGIQGDFNLN 68

Query: 72  NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 131
           NFQDGVLSSAFMVGLL+ASPIFASLAKSHNPFRLIGVGLSVWT A AGCGSSFDFWSIAI
Sbjct: 69  NFQDGVLSSAFMVGLLIASPIFASLAKSHNPFRLIGVGLSVWTLAIAGCGSSFDFWSIAI 128

Query: 132 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 191
           CRMLVGVGEASFISLAAPFIDDNAP  QKTAWL+ FYMCIP G ALGYVYGG+VGS  NW
Sbjct: 129 CRMLVGVGEASFISLAAPFIDDNAPDAQKTAWLATFYMCIPAGTALGYVYGGIVGSQFNW 188

Query: 192 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 251
           R AFW EAILMLPF +L FVIKPLQLKGFAP ES K  +  + +  SE  + +D ++ED 
Sbjct: 189 RVAFWVEAILMLPFPILGFVIKPLQLKGFAPLES-KQTLTYTETNVSETGD-DDTLAED- 245

Query: 252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 311
             QA  +  KS   S+  NQ + FS+D + LL ++VYV+NVLGYIAYNFVIGAYSYWGPK
Sbjct: 246 --QALLKGSKS--TSKLWNQFTIFSKDMQELLHDQVYVINVLGYIAYNFVIGAYSYWGPK 301

Query: 312 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 371
           AGY+IYHM+NAD++FGG+TIVCGIVGT++GG  LD++ +TISNAFKLLS ATFLGAI CL
Sbjct: 302 AGYSIYHMNNADLLFGGITIVCGIVGTLAGGLFLDRISSTISNAFKLLSGATFLGAIFCL 361

Query: 372 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 431
            AF   SL GF+  F++GELL+F TQAPVNYV L  VKPSLR LSMAISTVSIH+FGDVP
Sbjct: 362 IAFLFKSLSGFIVFFSMGELLIFVTQAPVNYVSLRCVKPSLRPLSMAISTVSIHVFGDVP 421

Query: 432 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKAN 491
           SSPLVGVLQDH+N+WRKT L LTSIFFLAA IWF+GIFLKS D +++D E Q +      
Sbjct: 422 SSPLVGVLQDHINDWRKTALCLTSIFFLAAVIWFIGIFLKS-DVYDKDDEEQSATTRGGK 480

Query: 492 MKPLLEGNGDN 502
           + PLL+G+ D 
Sbjct: 481 LTPLLDGSSDT 491

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519493|ref|XP_003528407.1| PREDICTED: protein spinster homolog 1-like [Glycine max]

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/521 (62%), Positives = 379/521 (72%), Gaps = 54/521 (10%)

Query: 28  SKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKR---------------------- 65
           ++ Q    +P    E +M T S      P+ SWFTPKR                      
Sbjct: 2   AQQQEHEGKPESSLEPDMGTNS---TMIPSTSWFTPKRLLAIFCVINLLNYLDRGAIASN 58

Query: 66  ---------------------GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR 104
                                GDF LNNF+DGVLSSAFMVGLLVASPIFASLAKS NPFR
Sbjct: 59  GVNGSQRTCEGGTCKSGTGIQGDFNLNNFEDGVLSSAFMVGLLVASPIFASLAKSVNPFR 118

Query: 105 LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 164
           LIGVGLSVWT AT  CG SF+FWSIA+CRMLVGVGEASFISLAAPFIDDNAPV QKTAWL
Sbjct: 119 LIGVGLSVWTLATLCCGFSFNFWSIAVCRMLVGVGEASFISLAAPFIDDNAPVSQKTAWL 178

Query: 165 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 224
           ++FYMCIP G A+GY+YGG+VG+H  WRY FW EAILM PFA+L FV+KPLQLKGFAP +
Sbjct: 179 AIFYMCIPAGYAIGYIYGGLVGNHFGWRYGFWVEAILMSPFAILGFVMKPLQLKGFAPTD 238

Query: 225 SGKAQVVASV-SEGSE--ASNLNDH---VSEDISDQASERSIKSIGESRFLNQLSQFSQD 278
           S KA  + +V SE S+  ASN  D    +  +  D++S    +S  +   L+Q S+F +D
Sbjct: 239 SEKALTLGTVASEVSDVGASNGKDEALSLKAEFRDKSSHEPSRS--KCTILDQFSRFLKD 296

Query: 279 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGT 338
            K LL +KV+VVNVLGYIAYNFVIGAYSYWGPKAGY+IY+M+NADMMFGG+T+VCGI+GT
Sbjct: 297 MKELLLDKVFVVNVLGYIAYNFVIGAYSYWGPKAGYSIYNMTNADMMFGGITVVCGILGT 356

Query: 339 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 398
           ++GGF+LD M  TISNAFKLLS ATF+G   C  AF   S YGFLALF VGELLVFATQ 
Sbjct: 357 VAGGFVLDFMTNTISNAFKLLSIATFIGGACCFGAFLFKSQYGFLALFAVGELLVFATQG 416

Query: 399 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 458
           PVNYVCLH VKPSLR LSMA+STV+IHIFGDVPSSPLVG++QD +NNWR T L LT+IFF
Sbjct: 417 PVNYVCLHCVKPSLRPLSMAMSTVAIHIFGDVPSSPLVGLMQDKINNWRTTALILTTIFF 476

Query: 459 LAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEGN 499
            AA IWF+GIFL S+D+FNED E+++S   + +  PLLE N
Sbjct: 477 PAAAIWFIGIFLPSVDRFNEDSEHEVSSVERTSTAPLLEEN 517

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357164805|ref|XP_003580172.1| PREDICTED: protein spinster homolog 1-like [Brachypodium distachyon]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 304/440 (69%), Positives = 360/440 (81%), Gaps = 8/440 (1%)

Query: 65  RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 124
           +GDF LNNF+DGVLSSAFMVGLLVASPIFASLAK HNPFRLIGVGL VWT ATAGCG SF
Sbjct: 159 QGDFNLNNFEDGVLSSAFMVGLLVASPIFASLAKIHNPFRLIGVGLLVWTIATAGCGCSF 218

Query: 125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184
           DFWSI ICRMLVGVGEASFISLAAPFIDDNAPV QKTAWL+MFYMCIPTG+ALGYVYGG+
Sbjct: 219 DFWSITICRMLVGVGEASFISLAAPFIDDNAPVAQKTAWLAMFYMCIPTGIALGYVYGGL 278

Query: 185 VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN 244
           VG  L+WR AFWGE+ILMLPF +L FVIKPL+LKGF   +  K        E  + +N N
Sbjct: 279 VGKRLHWRAAFWGESILMLPFVILGFVIKPLELKGFTHNKKTKEYGPMLNPELRDETNNN 338

Query: 245 D------HVSEDISDQASER-SIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 297
                    +E ++++  +R S  S G+ + + ++  F QD K LLQEKVYV+NVLGYIA
Sbjct: 339 GIKQGVPAGTEGLTEKIPQRFSFSSFGK-KVMIEIGHFGQDMKELLQEKVYVINVLGYIA 397

Query: 298 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFK 357
           YNFVIGAYSYWGPKAG +IY M++AD+MFGG+TIVCGI GT++GGFILD++ +TISNAFK
Sbjct: 398 YNFVIGAYSYWGPKAGQDIYKMASADLMFGGITIVCGIFGTLAGGFILDKIESTISNAFK 457

Query: 358 LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSM 417
           LLS ATFLGAI C +AFC  SLYGF+  F+VGELLVFATQAPVNY+CLH VKPSLR LSM
Sbjct: 458 LLSGATFLGAIFCFSAFCFKSLYGFIPFFSVGELLVFATQAPVNYICLHCVKPSLRPLSM 517

Query: 418 AISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFN 477
           A+STVSIHIFGDVPSSPLVG+LQD+++NWR T L LTSI F+A   WF+GIF++S+D+FN
Sbjct: 518 AMSTVSIHIFGDVPSSPLVGLLQDNIHNWRATALTLTSILFIAVIFWFIGIFVRSVDRFN 577

Query: 478 EDGENQISLDSKANMKPLLE 497
           E  E+ +    ++N++PLL+
Sbjct: 578 EQSEHGLPAAERSNLRPLLD 597

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105833|ref|XP_002313948.1| sugar transporter/spinster transmembrane protein [Populus trichocarpa] gi|222850356|gb|EEE87903.1| sugar transporter/spinster transmembrane protein [Populus trichocarpa]

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 318/494 (64%), Positives = 363/494 (73%), Gaps = 73/494 (14%)

Query: 48  RSLSEDSPPTPSWFTPKR------------------------------------------ 65
           RS +  SPP PSWFTPKR                                          
Sbjct: 3   RSSTALSPPAPSWFTPKRLLVIFCVINLINYVDRGAIASNGVNGSRRTCSKSGTCTFGSG 62

Query: 66  --GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 123
             GDF L+NF+DGVLSSAFMVGLLVA PIFASLAKS NPFRLIGVGLSVWT A  GCG S
Sbjct: 63  IQGDFNLSNFEDGVLSSAFMVGLLVACPIFASLAKSVNPFRLIGVGLSVWTVAVVGCGFS 122

Query: 124 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183
           F+FW+I ICRMLVGVGEASFISLAAPFIDDNAPV +KT WL +FYMCIPTG ALGYVYGG
Sbjct: 123 FNFWTITICRMLVGVGEASFISLAAPFIDDNAPVAKKTLWLGIFYMCIPTGYALGYVYGG 182

Query: 184 VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 243
           ++G H NWR+AF+GEAILMLPFAVL FV+KPLQLKGFAPAES KA               
Sbjct: 183 LIGGHFNWRFAFYGEAILMLPFAVLGFVMKPLQLKGFAPAESKKAL-------------- 228

Query: 244 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303
                      + E ++  +  ++F    S+F  D KVLL EKVYVVNVLGYIAYNFVIG
Sbjct: 229 ----------TSIETAVLEVQGAQF----SRFMIDVKVLLLEKVYVVNVLGYIAYNFVIG 274

Query: 304 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363
           AYSYWGPKAGYNIY+MSNADM+FGGVTIVCGIVGTI GG++LD + +TISNAFKLLSA T
Sbjct: 275 AYSYWGPKAGYNIYNMSNADMIFGGVTIVCGIVGTIGGGYVLDLINSTISNAFKLLSAVT 334

Query: 364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423
           F+GAI C +AFC  ++Y FLA F +GELLVFATQAPVNYVCLH VKPSLR +SMA+STV+
Sbjct: 335 FVGAIFCFSAFCFKNMYAFLAFFAIGELLVFATQAPVNYVCLHCVKPSLRPISMAMSTVA 394

Query: 424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGEN- 482
           IHIFGDVPSSPLVGVLQDH++NWRKT L LTSI F AA IWF+GIFL  +D+F+E+ E+ 
Sbjct: 395 IHIFGDVPSSPLVGVLQDHIDNWRKTALILTSILFPAAVIWFIGIFLHGVDRFDEESEHP 454

Query: 483 QISLDSKANMKPLL 496
           Q++   ++N  PLL
Sbjct: 455 QVTTADRSNTMPLL 468

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
TAIR|locus:2179401	484	AT5G64500 "AT5G64500" [Arabido	0.443	0.460	0.641	7.1e-143
TAIR|locus:504954889	492	AT5G65687 "AT5G65687" [Arabido	0.821	0.839	0.548	4.7e-119
TAIR|locus:2066045	510	AT2G22730 "AT2G22730" [Arabido	0.735	0.725	0.614	3.3e-118
FB|FBgn0086676	605	spin "spinster" [Drosophila me	0.296	0.246	0.314	4.2e-18
ZFIN|ZDB-GENE-060531-7	500	spns3 "spinster homolog 3 (Dro	0.284	0.286	0.284	1.1e-16
UNIPROTKB|Q9H2V7	528	SPNS1 "Protein spinster homolo	0.204	0.195	0.339	1.7e-16
UNIPROTKB|H3BMF4	573	SPNS1 "Spinster, isoform CRA_a	0.204	0.179	0.339	2.5e-16
MGI|MGI:1920908	528	Spns1 "spinster homolog 1" [Mu	0.204	0.195	0.339	7.5e-16
UNIPROTKB|E2RBY9	561	SPNS1 "Uncharacterized protein	0.204	0.183	0.339	7.8e-16
UNIPROTKB|Q08DX7	528	SPNS1 "Protein spinster homolo	0.204	0.195	0.339	1.2e-15

TAIR|locus:2179401 AT5G64500 "AT5G64500" [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 7.1e-143, Sum P(3) = 7.1e-143
 Identities = 145/226 (64%), Positives = 171/226 (75%)

Query:   273 SQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFXXXXXX 332
             S   +D K+LL +KVYV N+LGYIAYNFV+GAYSYWGPKAGYNIY M NADM+F      
Sbjct:   259 SAVMKDLKLLLVDKVYVTNILGYIAYNFVLGAYSYWGPKAGYNIYKMENADMIFGGVTVV 318

Query:   333 XXXXXXXXXXFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 392
                        ILD M ATISNAFK+LS +TF+GAI C  AFC  S+Y FLALF VGELL
Sbjct:   319 CGIVGTLSGGVILDYMDATISNAFKVLSVSTFIGAIFCFAAFCFKSMYAFLALFAVGELL 378

Query:   393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 452
             VFATQ PVN++ LH VKPSLR L+MA+STVSIHIFGDVPSSPLVGVLQD+VNNWR T+L 
Sbjct:   379 VFATQGPVNFIVLHCVKPSLRPLAMAMSTVSIHIFGDVPSSPLVGVLQDYVNNWRVTSLV 438

Query:   453 LTSIFFLAAGIWFVGIFLKSIDKFNEDGE-NQISLDSKANMKPLLE 497
             LT + F AA IW +GIFL S+D++NED E + ++ +S A   PLL+
Sbjct:   439 LTFVLFPAAAIWSIGIFLNSVDRYNEDSEPDAVTRESTA--APLLQ 482

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:504954889 AT5G65687 "AT5G65687" [Arabidopsis thaliana (taxid:3702)]

 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 236/430 (54%), Positives = 295/430 (68%)

Query:    65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 124
             +G+F L NF+DG+LSSAFMVGLLVASPIFA L+K  NPF+LIGVGL+VWT A  GCG S+
Sbjct:    72 QGEFNLTNFEDGLLSSAFMVGLLVASPIFAGLSKRFNPFKLIGVGLTVWTIAVIGCGFSY 131

Query:   125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTXXXXXXXXXXX 184
             +FW IA+ RM VGVGEASFISLAAP+IDD+APV +K  WL +FYMCIP            
Sbjct:   132 NFWMIAVFRMFVGVGEASFISLAAPYIDDSAPVARKNFWLGLFYMCIPAGVALGYVFGGY 191

Query:   185 XXSHLNWRYAFWGEAILMLPFAVLAFVIKP-LQLKGFAPAESGKAQXXXXXXXXXXXXNL 243
               +HL WR+AF+ EAI M  F +L+F IKP  QLKGFA  +S K              ++
Sbjct:   192 IGNHLGWRWAFYIEAIAMAVFVILSFCIKPPQQLKGFADKDSKKPST-----------SI 240

Query:   244 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303
                   D   +AS+   K+  +S+  N +  F +D K L  EKV++VNVLGYI YNFVIG
Sbjct:   241 ETVAPTDA--EASQIKTKT-PKSK--NLVVLFGKDLKALFSEKVFIVNVLGYITYNFVIG 295

Query:   304 AYSYWGPKAGYNIYHMSNADMMFXXXXXXXXXXXXXXXXFILDQMGATISNAFKLLSAAT 363
             AYSYWGPKAG+ IY M NADM+F                ++LD++ AT+SN FKLL+A+T
Sbjct:   296 AYSYWGPKAGFGIYKMKNADMIFGGLTIICGIIGTLGGSYVLDRINATLSNTFKLLAAST 355

Query:   364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423
              LGA  C TAF + ++Y F+ALF VGE+L+FA QAPVN+VCLH V+P+LR LSMA STV 
Sbjct:   356 LLGAAFCFTAFLMKNMYAFIALFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTVL 415

Query:   424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQ 483
             IHI GDVPSSPL G +QDH+ NWRK+TL +TSI FLAA IW +GIF+ S+D+ NE  E+ 
Sbjct:   416 IHILGDVPSSPLYGKMQDHLKNWRKSTLIITSILFLAAIIWGIGIFMNSVDRSNEVSEDD 475

Query:   484 ISLDSKANMK 493
                + K   K
Sbjct:   476 EVEEDKLESK 485

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2066045 AT2G22730 "AT2G22730" [Arabidopsis thaliana (taxid:3702)]

 Score = 1164 (414.8 bits), Expect = 3.3e-118, P = 3.3e-118
 Identities = 236/384 (61%), Positives = 273/384 (71%)

Query:   104 RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 163
             RLIGVGL+VWT A  GCGSSF FW I +CRM VGVGEASFISLAAPFIDDNAP  QK AW
Sbjct:   128 RLIGVGLTVWTIAVLGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDDNAPQEQKAAW 187

Query:   164 LSMFYMCIPTXXXXXXXXXXXXXSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 223
             L +FYMCIP+              H +WRYAFWGEA+LM PFAVL F++KPLQLKG   +
Sbjct:   188 LGLFYMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVLMAPFAVLGFLMKPLQLKG---S 244

Query:   224 ESGKAQXXXXXXXXXXXXNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 283
             E+ K               +++ +  D  + + E S  S   + F    + F++D KVL 
Sbjct:   245 ETLKNNNRL---------QVDNEIEHDQFEVSIETSKSSYANAVF-KSFTGFAKDMKVLY 294

Query:   284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFXXXXXXXXXXXXXXXXF 343
             +EKV+VVNVLGY++YNFVIGAYSYWGPKAGYNIY M NADM+F                F
Sbjct:   295 KEKVFVVNVLGYVSYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGF 354

Query:   344 ILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 403
             ILD++ ATI NAFKLLS ATFLGA+ C TAF L SLYGF+ALF +GELLVFATQAPVNYV
Sbjct:   355 ILDRVTATIPNAFKLLSGATFLGAVFCFTAFTLKSLYGFIALFALGELLVFATQAPVNYV 414

Query:   404 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 463
             CLH VKPSLR LSMAISTV+IHIFGDVPSSPLVG++QDH+N+WRKTTL LTSI FLAA I
Sbjct:   415 CLHCVKPSLRPLSMAISTVAIHIFGDVPSSPLVGIVQDHINSWRKTTLILTSILFLAAAI 474

Query:   464 WFVG-IFLKSIDKFNEDGENQISL 486
             WF+G I L S    +E    QI L
Sbjct:   475 WFIGKINLNSFYSNDESFLVQIKL 498

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0086676 spin "spinster" [Drosophila melanogaster (taxid:7227)]

 Score = 174 (66.3 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
 Identities = 49/156 (31%), Positives = 76/156 (48%)

Query:    62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 121
             T  R DF + N   G+L + F++  +V +PIF  L   ++   ++ VG+ +W+  T   G
Sbjct:   139 TDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTL-LG 197

Query:   122 SSF-DF-WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTXXXXXX 179
             S    F W IA  R LVG+GEAS+ ++A   I D      ++  L++FY  IP       
Sbjct:   198 SFMKQFGWFIAF-RALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGY 256

Query:   180 XXXXXXXSHL--NWRYAFWGEAILMLPFAVLAFVIK 213
                    +HL  +WR+A     IL +    L  +IK
Sbjct:   257 IVGSKT-AHLANDWRWALRVTPILGIVAVFLILLIK 291

GO:0007422 "peripheral nervous system development" evidence=NAS

GO:0005886 "plasma membrane" evidence=NAS

GO:0045924 "regulation of female receptivity" evidence=IMP

GO:0043067 "regulation of programmed cell death" evidence=IMP

GO:0035193 "larval central nervous system remodeling" evidence=IMP

GO:0045477 "regulation of nurse cell apoptotic process" evidence=IMP

GO:0012501 "programmed cell death" evidence=NAS

GO:0007619 "courtship behavior" evidence=NAS

GO:0008582 "regulation of synaptic growth at neuromuscular junction" evidence=IMP

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006897 "endocytosis" evidence=IMP

GO:0008333 "endosome to lysosome transport" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0048488 "synaptic vesicle endocytosis" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0009267 "cellular response to starvation" evidence=IMP

GO:0007040 "lysosome organization" evidence=IMP

GO:0010001 "glial cell differentiation" evidence=IMP

GO:0008347 "glial cell migration" evidence=IMP

GO:0031982 "vesicle" evidence=IDA

GO:0090099 "negative regulation of decapentaplegic signaling pathway" evidence=IGI

ZFIN|ZDB-GENE-060531-7 spns3 "spinster homolog 3 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 150 (57.9 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
 Identities = 43/151 (28%), Positives = 70/151 (46%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F +++   G+L + F+   +  +P+F  L   ++   ++ VGL +W   T G  SSF   
Sbjct:    79 FFISDSTSGLLQTVFICSFMFLAPVFGYLGDRYDRKLIMIVGLVMWIVTTLG--SSFVRK 136

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTXXXXXXXXXX 183
               FW +   R LVG GEAS+ ++A   I D     ++T  +S FY+ IP           
Sbjct:   137 SHFWVLVATRALVGTGEASYSTIAPTIIGDLFAGSKRTLMISFFYIFIPVGSGLGYIIGA 196

Query:   184 XXXSHL-NWRYAFW-GEAILMLPFAVLAFVI 212
                    +WR+A     A+  L   +L F+I
Sbjct:   197 TVADATGDWRWALRVSPALGGLGLLLLVFLI 227

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

UNIPROTKB|Q9H2V7 SPNS1 "Protein spinster homolog 1" [Homo sapiens (taxid:9606)]

 Score = 161 (61.7 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
 Identities = 37/109 (33%), Positives = 59/109 (54%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F + +   G++ + F+   +V +P+F  L   +N   L+  G++ W+  T G  SSF   
Sbjct:    90 FNIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG--SSFIPG 147

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               FW + + R LVGVGEAS+ ++A   I D     Q++  LS+FY  IP
Sbjct:   148 EHFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIP 196

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|H3BMF4 SPNS1 "Spinster, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 161 (61.7 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
 Identities = 37/109 (33%), Positives = 59/109 (54%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F + +   G++ + F+   +V +P+F  L   +N   L+  G++ W+  T G  SSF   
Sbjct:   135 FNIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG--SSFIPG 192

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               FW + + R LVGVGEAS+ ++A   I D     Q++  LS+FY  IP
Sbjct:   193 EHFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIP 241

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

MGI|MGI:1920908 Spns1 "spinster homolog 1" [Mus musculus (taxid:10090)]

 Score = 159 (61.0 bits), Expect = 7.5e-16, Sum P(3) = 7.5e-16
 Identities = 37/109 (33%), Positives = 59/109 (54%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F + +   G++ + F+   +V +P+F  L   +N   L+  G++ W+  T G  SSF   
Sbjct:    90 FNIGDGSTGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG--SSFIPR 147

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               FW + + R LVGVGEAS+ ++A   I D     Q++  LS+FY  IP
Sbjct:   148 EHFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIP 196

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E2RBY9 SPNS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 159 (61.0 bits), Expect = 7.8e-16, Sum P(4) = 7.8e-16
 Identities = 37/109 (33%), Positives = 59/109 (54%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F + +   G++ + F+   +V +P+F  L   +N   L+  G++ W+  T G  SSF   
Sbjct:   123 FDIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG--SSFIPR 180

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               FW + + R LVGVGEAS+ ++A   I D     Q++  LS+FY  IP
Sbjct:   181 ERFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSVFYFAIP 229

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q08DX7 SPNS1 "Protein spinster homolog 1" [Bos taurus (taxid:9913)]

 Score = 158 (60.7 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
 Identities = 37/109 (33%), Positives = 59/109 (54%)

Query:    68 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--- 124
             F + +   G++ + F+   +V +P+F  L   +N   L+  G++ W+  T G  SSF   
Sbjct:    90 FDIGDGSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG--SSFIPR 147

Query:   125 -DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               FW + + R LVGVGEAS+ ++A   I D     Q++  LS+FY  IP
Sbjct:   148 ERFWLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSVFYFAIP 196

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006869 "lipid transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FLG8	SPNS2_ARATH	No assigned EC number	0.6836	0.7992	0.8305	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	503
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	9e-20
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	1e-18
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	2e-12
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	4e-10
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	7e-09
pfam03137	582	pfam03137, OATP, Organic Anion Transporter Polypep	2e-08
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	6e-07
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	1e-05
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-05
TIGR00711	485	TIGR00711, efflux_EmrB, drug resistance transporte	3e-04
TIGR00805	633	TIGR00805, oat, sodium-independent organic anion t	0.001
PRK03545	390	PRK03545, PRK03545, putative arabinose transporter	0.001
pfam00083	449	pfam00083, Sugar_tr, Sugar (and other) transporter	0.003

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 90.5 bits (225), Expect = 9e-20
 Identities = 40/149 (26%), Positives = 69/149 (46%)

Query: 67  DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 126
           D  L+  Q G++ SAF +G  + S +   L+      R++ +GL ++   +     +   
Sbjct: 28  DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSL 87

Query: 127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186
           W + + R L+G+G  +    AA  I +  P  ++   L +F      G  LG + GG++ 
Sbjct: 88  WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA 147

Query: 187 SHLNWRYAFWGEAILMLPFAVLAFVIKPL 215
             L WR+ F   AIL L  A+L   +  L
Sbjct: 148 ESLGWRWLFLILAILGLLLALLLLFLLRL 176

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 67/361 (18%), Positives = 123/361 (34%), Gaps = 47/361 (13%)

Query: 67  DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 126
           D  ++  + G+L +AF +G  +A P+   L+      R++ +GL ++         +   
Sbjct: 26  DLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSL 85

Query: 127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186
           W + + R+L G+G  +    AA  I D  P  ++   L +       G ALG + GG++ 
Sbjct: 86  WLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLA 145

Query: 187 SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDH 246
           S   WR AF   AIL L  AVLA ++ P                                
Sbjct: 146 SLFGWRAAFLILAILALLAAVLAALLLP----------------------------RPPP 177

Query: 247 VSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS 306
            S+         +         L                   +  +L  + + F   A  
Sbjct: 178 ESKRPKPAEEAPAPLVPAWKLLLRD---------------PVLWLLLALLLFGFAFFALL 222

Query: 307 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365
            + P     +  +S     +  G+  + G +G +  G + D++G        LL      
Sbjct: 223 TYLPLYQ-EVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAA 281

Query: 366 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 425
             +  L +   SSL+  +AL  +G          +N +         R  +  +   +  
Sbjct: 282 LGL-ALLSLTESSLWLLVALLLLG-FGAGLVFPALNALVSDLAPKEERGTASGLYNTAGS 339

Query: 426 I 426
           +
Sbjct: 340 L 340

Length = 346

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 76  GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 135
           G+L + + +G L+ SP+   L        ++ VGL ++  +TA    S +   + I R L
Sbjct: 1   GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60

Query: 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 195
            G G A  +   A  I D  P  ++   L +    I  G  LG   GGV+   L WR  F
Sbjct: 61  QGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPF 120

Query: 196 WGEAILML-PFAVLAFVIKP 214
              AIL L  F +LAF++  
Sbjct: 121 LFLAILALAAFILLAFLLPE 140

Length = 141

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 61.2 bits (149), Expect = 4e-10
 Identities = 67/349 (19%), Positives = 127/349 (36%), Gaps = 40/349 (11%)

Query: 67  DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 126
           ++ L+  Q G L SA ++G+   +  F  LA      R++   + +++  T  C  + + 
Sbjct: 46  EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNV 105

Query: 127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186
             + I R L G+G    +      + + AP   +   + + +   P G A+G    G + 
Sbjct: 106 TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165

Query: 187 SHLNWRYAFW-GEAILMLPFAVLAFV----IKPLQLKGFAPAESGKAQVVASVSEGSEAS 241
               WR  F+ G    +L   +L       I  L  K          + + +       +
Sbjct: 166 PVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR-----PETVRRIVNAIAPQMQA 220

Query: 242 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE---KVYVVNVLGYIAY 298
                + E  + Q ++RS+                   K L Q    ++ V+  L Y   
Sbjct: 221 EAQSALPEQKATQGTKRSVF------------------KALFQGKTARITVLLWLLYFML 262

Query: 299 NFVIGAYSYWGPK----AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN 354
              +   + W PK     G++     +     G +    G++G+I  G++ D++G  ++ 
Sbjct: 263 LVGVYFLTNWLPKLMVELGFS----LSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA 318

Query: 355 AFKLLSAATFLGAISCLTAFCLSSLYGFLA-LFTVGELLVFATQAPVNY 402
              LL A   +   S L +  L  L G +A  F  G          + Y
Sbjct: 319 LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY 367

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 57.6 bits (140), Expect = 7e-09
 Identities = 73/402 (18%), Positives = 138/402 (34%), Gaps = 70/402 (17%)

Query: 76  GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 135
           G L +A+ +G+ + +P+ A L       RL+   L+++  +      +  F  + + R L
Sbjct: 51  GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARAL 110

Query: 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 195
            G+    F S+AA       P  ++   L++ +  +     LG   G  +G    WR  F
Sbjct: 111 AGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170

Query: 196 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA 255
              A+L    A+LA +   L  K   P+E   +                           
Sbjct: 171 LAIAVL----ALLALL---LLWKLLPPSEISGS--------------------------- 196

Query: 256 SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 315
                           L    +   VLL     +   L    +      Y+Y  P    +
Sbjct: 197 --------LPGPLRTLLRLLRR-PGVLL---GLLATFLFMTGHF---ALYTYIRPFLE-S 240

Query: 316 IYHMSNAD-----MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 370
           +   S +      + FG    + G +G + GG + D+         + L AA  L A++ 
Sbjct: 241 VAGFSVSAVSLVLLAFG----IAGFIGNLLGGRLADR------GPRRALIAALLLLALA- 289

Query: 371 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGD 429
           L A   +     LAL  +       + A        + + P    L+ +++  + ++ G 
Sbjct: 290 LLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNL-GI 348

Query: 430 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLK 471
              + L G++ D +      T  + +   L A +  +    K
Sbjct: 349 ALGAALGGLVLDALGYA--ATGWVGAALLLLALLLALLSARK 388

Length = 394

>gnl|CDD|217384 pfam03137, OATP, Organic Anion Transporter Polypeptide (OATP) family

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 59/280 (21%), Positives = 97/280 (34%), Gaps = 54/280 (19%)

Query: 134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV--------- 184
           +L G+G     +L   +IDDN        +L + +     G A+G++ G           
Sbjct: 147 LLRGIGATPIFTLGISYIDDNVKSKNSPLYLGILFTMAMFGPAIGFLLGSFCLRLYVDFG 206

Query: 185 ----VGSHLN-----WRYAFW----GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 231
                   +      W  A+W        L L  + + F   P  L     A+     + 
Sbjct: 207 RVPTEDVIITPTDPRWVGAWWLGFLVCGGLAL-LSAIPFFFFPKTLPK---AQGRLESLD 262

Query: 232 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 291
            S  +  + +       E  S +++   +K             F +  K LL    +++ 
Sbjct: 263 LSRPKAKDETR--KQAEEPKSGKSAPDFLK------------DFPKTLKRLLTNPTFMLV 308

Query: 292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMS--NADMMFGGVTIVCGIVGTISGGFILDQMG 349
           VL  +  + VI  YS + PK     Y +S   A+ + G V +    VG + GG I+    
Sbjct: 309 VLAQVFESSVIAGYSTFLPKYLETQYGLSASYANFLIGVVNLPAAAVGILLGGLII---- 364

Query: 350 ATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 389
                 FKL    T  G         L SL  +L  F +G
Sbjct: 365 ----KKFKL----TARGMAKFAIFVILVSLAFYLPYFFIG 396

This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters. Length = 582

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 51.2 bits (123), Expect = 6e-07
 Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 1/147 (0%)

Query: 68  FKLNNFQDGVLSSAFMVGLLVASPIFASLA-KSHNPFRLIGVGLSVWTFATAGCGSSFDF 126
             L+  + G+L S F +G ++ + +   L+ +      L+ +GL +          +   
Sbjct: 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSL 265

Query: 127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186
             + +  +L+G G             + AP   +     +F      G ALG +  G++ 
Sbjct: 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325

Query: 187 SHLNWRYAFWGEAILMLPFAVLAFVIK 213
               +   F   A L L  A+L  ++ 
Sbjct: 326 DTGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 66/323 (20%), Positives = 111/323 (34%), Gaps = 54/323 (16%)

Query: 67  DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 126
           D  L+  Q G + SAF  G +V       L       + + V + +W   T     +  +
Sbjct: 23  DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82

Query: 127 WSIAICRMLVGVGEASFIS-----LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 181
            S+ I R+L+G  EA F       +A+ F     P  ++   +S+F      G  +G   
Sbjct: 83  VSLYILRVLLGAAEAPFFPGIILIVASWF-----PASERATAVSIFNSAQGLGGIIGGPL 137

Query: 182 GGVVGSHLNWRYAFWGEAIL--MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 239
            G +  H +W++AF  E +L  +     L F+  P Q   +   E     V   ++E   
Sbjct: 138 VGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQG 197

Query: 240 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299
                              + K               Q  ++L   +V+ +  LG    N
Sbjct: 198 KGP---------------STPKK-------------YQIKELLKDRRVWGL-ALGQFLVN 228

Query: 300 FVIGAYSYWGP-----KAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN 354
             +G +  W P     + G +I            +  + G +G I GG + D     +  
Sbjct: 229 IGLGFFLTWFPTYLVQERGLSILEAG----FMASLPGIVGFIGMILGGRLSD----LLLR 280

Query: 355 AFKLLSAATFLGAISCLTAFCLS 377
             K L  A     I+ L    L 
Sbjct: 281 RGKSLVFARKTAIIAGLVLSLLM 303

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 7/176 (3%)

Query: 292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA 350
            L +   +F       + P     +  +S A+  +   +  + GI+G + GG + D++G 
Sbjct: 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLG- 239

Query: 351 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 410
                  LL     L A+  L      SL   L    +    +      +  +      P
Sbjct: 240 ---RRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPP 296

Query: 411 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 466
             R  +  +      + G      L G+L D    +    L L ++  LAA +  +
Sbjct: 297 EARGTASGLFNTFGSLGG-ALGPLLAGLLLDTG-GYGGVFLILAALALLAALLLLL 350

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 4/146 (2%)

Query: 80  SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139
           +++M+   ++ P+   LAK     RL  +    +T  +  CG + +   + I R++ G G
Sbjct: 44  TSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFG 103

Query: 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 199
               I L+   + +  P  ++   ++++ + +    ALG   GG +  + +WR+ F    
Sbjct: 104 GGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLIN- 162

Query: 200 ILMLPFAVLAFVIKPLQLKGFAPAES 225
              +P  ++  V+    L    PA S
Sbjct: 163 ---VPIGIIVVVVAFFILPRDKPAAS 185

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]. Length = 485

>gnl|CDD|233136 TIGR00805, oat, sodium-independent organic anion transporter

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 23/68 (33%), Positives = 36/68 (52%)

Query: 375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 434
           C +SL  FL LF     + F T  P+  V L  V P  R+L++ +  + + +FG +P+  
Sbjct: 514 CATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEERSLAIGLQWLCMRVFGTIPAPI 573

Query: 435 LVGVLQDH 442
           L G+L D 
Sbjct: 574 LFGLLIDV 581

The Organo Anion Transporter (OAT) Family (TC 2.A.60)Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. Length = 633

>gnl|CDD|179591 PRK03545, PRK03545, putative arabinose transporter; Provisional

 Score = 40.6 bits (96), Expect = 0.001
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 10/100 (10%)

Query: 120 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 179
              +++F  + I R+ +    A F S+ A      AP  +K   LS+    + TG AL  
Sbjct: 91  SALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSL----LATGTALAM 146

Query: 180 VYG----GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215
           V G     V+G +L WR  F   AI       L  +IK L
Sbjct: 147 VLGLPLGRVIGQYLGWRTTFL--AIGGGALITLLLLIKLL 184

Length = 390

>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter

 Score = 39.6 bits (93), Expect = 0.003
 Identities = 33/155 (21%), Positives = 60/155 (38%), Gaps = 11/155 (7%)

Query: 66  GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK--SHNPFRLIGVGLSVWTFATAGCGSS 123
           G    +    G++ S F VG L+ S     L          LIG  L V        G +
Sbjct: 39  GACAASTVLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFV--IGALLQGFA 96

Query: 124 FD--FWSIAICRMLVGVGEASFISLAAP-FIDDNAPVPQKTAWLSMFYMCIPTGVALGYV 180
               F+ + + R++VG+G    IS+  P +I + AP   + A  S++ + I  G+ +  +
Sbjct: 97  KGKSFYMLIVGRVIVGLG-VGGISVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAI 155

Query: 181 YG---GVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212
            G       +   WR     + +  +   +    +
Sbjct: 156 IGLGLNKYSNSDGWRIPLGLQFVPAILLLIGLLFL 190

Length = 449

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	503
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
KOG1330	493	consensus Sugar transporter/spinster transmembrane	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
PLN00028	476	nitrate transmembrane transporter; Provisional	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PRK03699	394	putative transporter; Provisional	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK09952	438	shikimate transporter; Provisional	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	100.0
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	100.0
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
TIGR00898	505	2A0119 cation transport protein.	100.0
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	100.0
PRK10077	479	xylE D-xylose transporter XylE; Provisional	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
PRK15075	434	citrate-proton symporter; Provisional	100.0
PRK10504	471	putative transporter; Provisional	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
PRK03893	496	putative sialic acid transporter; Provisional	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
KOG2532	466	consensus Permease of the major facilitator superf	100.0
PRK11646	400	multidrug resistance protein MdtH; Provisional	100.0
KOG2533	495	consensus Permease of the major facilitator superf	100.0
PRK10133	438	L-fucose transporter; Provisional	100.0
PRK12382	392	putative transporter; Provisional	100.0
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	100.0
PRK10473	392	multidrug efflux system protein MdtL; Provisional	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	100.0
PRK03633	381	putative MFS family transporter protein; Provision	100.0
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	100.0
PRK11195	393	lysophospholipid transporter LplT; Provisional	100.0
PRK11010	491	ampG muropeptide transporter; Validated	100.0
TIGR00895	398	2A0115 benzoate transport.	100.0
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	100.0
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	100.0
TIGR00805	633	oat sodium-independent organic anion transporter.	100.0
PRK10054	395	putative transporter; Provisional	100.0
PRK11043	401	putative transporter; Provisional	100.0
PRK15011	393	sugar efflux transporter B; Provisional	100.0
PRK11652	394	emrD multidrug resistance protein D; Provisional	100.0
TIGR00896	355	CynX cyanate transporter. This family of proteins	100.0
KOG0569	485	consensus Permease of the major facilitator superf	100.0
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	100.0
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.98
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.98
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.98
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.97
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.97
KOG0254	513	consensus Predicted transporter (major facilitator	99.97
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.97
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.97
PRK09528	420	lacY galactoside permease; Reviewed	99.97
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.97
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.97
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.97
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.97
PRK11902	402	ampG muropeptide transporter; Reviewed	99.97
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.97
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.96
TIGR00901	356	2A0125 AmpG-related permease.	99.96
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.96
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.96
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	99.96
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	99.96
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.96
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	99.96
KOG2615	451	consensus Permease of the major facilitator superf	99.96
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.95
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.95
PTZ00207	591	hypothetical protein; Provisional	99.95
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.94
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.94
KOG3626	735	consensus Organic anion transporter [Secondary met	99.93
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.92
PRK09669	444	putative symporter YagG; Provisional	99.92
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.91
PRK10429	473	melibiose:sodium symporter; Provisional	99.91
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.91
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.91
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.91
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.9
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.9
PRK09848	448	glucuronide transporter; Provisional	99.89
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.89
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.89
PF13347	428	MFS_2: MFS/sugar transport protein	99.88
PRK11462	460	putative transporter; Provisional	99.87
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.87
KOG2563	480	consensus Permease of the major facilitator superf	99.87
COG2211	467	MelB Na+/melibiose symporter and related transport	99.82
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.8
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.78
KOG2325	488	consensus Predicted transporter/transmembrane prot	99.77
KOG2816	463	consensus Predicted transporter ADD1 (major facili	99.73
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.7
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.66
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.65
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.63
PRK09528	420	lacY galactoside permease; Reviewed	99.61
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.58
PRK10642	490	proline/glycine betaine transporter; Provisional	99.57
PRK15011	393	sugar efflux transporter B; Provisional	99.54
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.53
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.53
PRK05122	399	major facilitator superfamily transporter; Provisi	99.52
PRK10489	417	enterobactin exporter EntS; Provisional	99.51
PRK09874	408	drug efflux system protein MdtG; Provisional	99.5
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.5
PRK03893	496	putative sialic acid transporter; Provisional	99.5
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.49
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.47
PRK12382	392	putative transporter; Provisional	99.47
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.46
PRK03545	390	putative arabinose transporter; Provisional	99.45
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.44
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.43
KOG3762	618	consensus Predicted transporter [General function	99.42
PRK03633	381	putative MFS family transporter protein; Provision	99.42
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.41
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.41
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.41
PRK03699	394	putative transporter; Provisional	99.4
PRK09705	393	cynX putative cyanate transporter; Provisional	99.4
PRK10054	395	putative transporter; Provisional	99.39
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.38
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.38
TIGR00893	399	2A0114 d-galactonate transporter.	99.37
PRK11663	434	regulatory protein UhpC; Provisional	99.36
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.36
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.35
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.33
TIGR00900	365	2A0121 H+ Antiporter protein.	99.33
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.32
TIGR00891	405	2A0112 putative sialic acid transporter.	99.32
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.32
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.3
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.29
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.27
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	99.26
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.26
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.26
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.25
PRK09952	438	shikimate transporter; Provisional	99.24
PLN00028	476	nitrate transmembrane transporter; Provisional	99.24
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.24
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.22
PRK10504	471	putative transporter; Provisional	99.22
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	99.22
PRK11010	491	ampG muropeptide transporter; Validated	99.22
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.22
KOG3098	461	consensus Uncharacterized conserved protein [Funct	99.22
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.21
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.21
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	99.21
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.2
PRK15075	434	citrate-proton symporter; Provisional	99.19
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.19
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.18
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.18
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.18
PRK10091	382	MFS transport protein AraJ; Provisional	99.18
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.18
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.17
TIGR00895	398	2A0115 benzoate transport.	99.17
PRK11043	401	putative transporter; Provisional	99.16
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.15
PRK11902	402	ampG muropeptide transporter; Reviewed	99.15
KOG0637	498	consensus Sucrose transporter and related proteins	99.15
PRK12307	426	putative sialic acid transporter; Provisional	99.14
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.14
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.13
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.13
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.13
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	99.13
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.12
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.11
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.11
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.1
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.1
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.09
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.08
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.08
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.08
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.08
TIGR00898	505	2A0119 cation transport protein.	99.05
KOG2615	451	consensus Permease of the major facilitator superf	99.05
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.04
KOG3810	433	consensus Micronutrient transporters (folate trans	99.04
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	99.03
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.03
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.02
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.02
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.01
PRK09848	448	glucuronide transporter; Provisional	99.01
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.01
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.0
KOG0569	485	consensus Permease of the major facilitator superf	98.99
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.99
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	98.98
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	98.96
PF13347	428	MFS_2: MFS/sugar transport protein	98.92
KOG3762	618	consensus Predicted transporter [General function	98.91
PRK10429	473	melibiose:sodium symporter; Provisional	98.89
PRK10133	438	L-fucose transporter; Provisional	98.88
KOG3764	464	consensus Vesicular amine transporter [Intracellul	98.88
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.87
COG0477	338	ProP Permeases of the major facilitator superfamil	98.86
TIGR00901	356	2A0125 AmpG-related permease.	98.85
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.84
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.79
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.79
PTZ00207	591	hypothetical protein; Provisional	98.78
PRK09669	444	putative symporter YagG; Provisional	98.75
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.73
TIGR00805	633	oat sodium-independent organic anion transporter.	98.72
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	98.72
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	98.7
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	98.66
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.62
KOG2532	466	consensus Permease of the major facilitator superf	98.61
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	98.59
COG2211	467	MelB Na+/melibiose symporter and related transport	98.59
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	98.55
KOG2533	495	consensus Permease of the major facilitator superf	98.55
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.54
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.54
PRK11462	460	putative transporter; Provisional	98.49
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	98.39
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	98.38
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	98.24
COG3202	509	ATP/ADP translocase [Energy production and convers	98.24
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	98.24
KOG0254	513	consensus Predicted transporter (major facilitator	98.22
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.18
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	98.03
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.01
PF12832	77	MFS_1_like: MFS_1 like family	97.99
KOG3880	409	consensus Predicted small molecule transporter inv	97.91
KOG2816	463	consensus Predicted transporter ADD1 (major facili	97.86
KOG2325	488	consensus Predicted transporter/transmembrane prot	97.75
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	97.74
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.68
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	97.47
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.44
KOG2563	480	consensus Permease of the major facilitator superf	97.23
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.14
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	97.09
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	96.95
PF12832	77	MFS_1_like: MFS_1 like family	96.85
PRK03612	521	spermidine synthase; Provisional	96.81
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	96.79
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.47
KOG2601	503	consensus Iron transporter [Inorganic ion transpor	96.4
KOG0637	498	consensus Sucrose transporter and related proteins	96.37
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	96.24
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	96.23
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	96.07
COG0477	338	ProP Permeases of the major facilitator superfamil	95.93
KOG3098	461	consensus Uncharacterized conserved protein [Funct	95.91
PRK03612	521	spermidine synthase; Provisional	95.64
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	95.56
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	94.49
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	93.78
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	93.62
KOG3626	735	consensus Organic anion transporter [Secondary met	93.43
KOG3097	390	consensus Predicted membrane protein [Function unk	92.78
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	92.49
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	92.44
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	91.58
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	89.36
PF06912	209	DUF1275: Protein of unknown function (DUF1275); In	87.04
KOG3880	409	consensus Predicted small molecule transporter inv	85.72
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	82.77
COG5336	116	Uncharacterized protein conserved in bacteria [Fun	82.51
KOG4830	412	consensus Predicted sugar transporter [Carbohydrat	80.57
KOG3810	433	consensus Micronutrient transporters (folate trans	80.5
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	80.17

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-40  Score=300.86  Aligned_cols=370  Identities=18%  Similarity=0.197  Sum_probs=296.3

Q ss_pred             CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692           36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF  115 (503)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~  115 (503)
                      ++.+.+..|....   ... ....++|++++|+|+|..+.|++.|+|.+++.+++++...+.||+.||++++..+.++.+
T Consensus        15 l~aLa~~~F~igt---tEf-v~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~   90 (394)
T COG2814          15 LLALALAAFAIGT---TEF-VPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV   90 (394)
T ss_pred             HHHHHHHHHHHHh---HHH-HHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence            3344444444444   222 233444999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHH
Q 010692          116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF  195 (503)
Q Consensus       116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f  195 (503)
                      +++++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+.+++.++|.++|.++.+.+|||+.|
T Consensus        91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F  170 (394)
T COG2814          91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF  170 (394)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhch
Q 010692          196 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF  275 (503)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (503)
                      +..++++++..+..+..+|  +++  .+++.+..                                              
T Consensus       171 ~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~----------------------------------------------  200 (394)
T COG2814         171 LAIAVLALLALLLLWKLLP--PSE--ISGSLPGP----------------------------------------------  200 (394)
T ss_pred             HHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcc----------------------------------------------
Confidence            9999999999999998888  111  11111100                                              


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchh
Q 010692          276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN  354 (503)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~  354 (503)
                      .++..+++|+|.++...+..++...+.+...+|+..++++..|.+.... .....++++.++|++++|++.|| +.+   
T Consensus       201 ~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~---  276 (394)
T COG2814         201 LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR---  276 (394)
T ss_pred             hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch---
Confidence            1334578899999999999999999999999999999999999887655 55577889999999999999999 555   


Q ss_pred             hHHHHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          355 AFKLLSAA-TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       355 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                        +.+... .++......+....++.+..+...++.++..............+ .-|+.++.+.++.....|+ |..+|.
T Consensus       277 --~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA  352 (394)
T COG2814         277 --RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL-GIALGA  352 (394)
T ss_pred             --hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH-HHHHHH
Confidence              444444 33334444444444555555555555555554443344444444 4468899999999999999 999999


Q ss_pred             hhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692          434 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       434 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                      .++|.+.|+.| +....++.+...+++..+.+...
T Consensus       353 ~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~~  386 (394)
T COG2814         353 ALGGLVLDALG-YAATGWVGAALLLLALLLALLSA  386 (394)
T ss_pred             HHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999966 77778887777777766665433

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.2e-42  Score=304.29  Aligned_cols=376  Identities=17%  Similarity=0.163  Sum_probs=295.9

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+|.++|.+|+|++.+++.+.|.++..+.|.++||.+.|+.+.+++++.++.+++++++++++.+.+.-++.|...|
T Consensus        53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg  132 (448)
T COG2271          53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQG  132 (448)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence            66789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH--HhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      ..+|.+...+..|++++|||+..++++++.++|..+.|++.  +++..+.+||..|++.++++++..++.++..+++|+.
T Consensus       133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs  212 (448)
T COG2271         133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS  212 (448)
T ss_pred             CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            99999999999999999999999999999999999999999  8898888999999999999999999999888776554


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN  299 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (503)
                      ..-|.-++...                  +..+...++++++..+         ....-.+.+++||.+|.+.++.++..
T Consensus       213 ~GLP~ie~~~~------------------d~~e~~~~~~~~~~ls---------~~~i~~~YVL~Nk~iW~la~a~vfvY  265 (448)
T COG2271         213 EGLPPIEEYRG------------------DPLEIYEEEKENEGLT---------AWQIFVKYVLKNKLIWLLALANVFVY  265 (448)
T ss_pred             cCCCCHHHhhc------------------CchhhhhhhccCCCcc---------HHHHHHHHHHcChHHHHHHHHHHHHH
Confidence            33322222110                  0000000000000000         00133567899999999999999999


Q ss_pred             HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-  377 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  377 (503)
                      ..-+++..|.|.|+.+..+.+...+ ...+++-.++++|.+++||++||+.+.++.  ...++..+...+........+ 
T Consensus       266 ivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~~~~i~~~~~~~w~~~~  343 (448)
T COG2271         266 VVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIFMLLITASLVLYWLAPN  343 (448)
T ss_pred             HHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999997665 444677799999999999999997532111  233333333333333333333 


Q ss_pred             -hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          378 -SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       378 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                       +.+...++++..|++..+-....-....|..|++..|++.|+...+.+++|...+....|++.|.+| |...|.+..+.
T Consensus       344 ~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~  422 (448)
T COG2271         344 GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIA  422 (448)
T ss_pred             ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHH
Confidence             3355566666666666555545555677888889999999999999999899989999999999876 77888887777


Q ss_pred             HHHHHHHHHHH
Q 010692          457 FFLAAGIWFVG  467 (503)
Q Consensus       457 ~~~~~~~~~~~  467 (503)
                      .+++.++.+..
T Consensus       423 a~l~~lll~~~  433 (448)
T COG2271         423 ALLAILLLLPV  433 (448)
T ss_pred             HHHHHHHHHHH
Confidence            66666655543

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=6.1e-40  Score=320.46  Aligned_cols=377  Identities=16%  Similarity=0.127  Sum_probs=269.1

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAIC  132 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~  132 (503)
                      +...|++.+|+|++.++.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.++.++     ++|++.+++.
T Consensus        49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  128 (467)
T PRK09556         49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL  128 (467)
T ss_pred             hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence            33347789999999999999999999999999999999999999999999988888877776665     5899999999


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc---hhHHHHHHHHHHHHHHHHHH
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~  209 (503)
                      |+++|++.+...+...++++||+|+++||+++++++.+.++|.++++++..++.+..   +||..|.+.+++.++..++.
T Consensus       129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~  208 (467)
T PRK09556        129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG  208 (467)
T ss_pred             HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999887766543   69999999888888777776


Q ss_pred             HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHH-HHHHhhhhhH
Q 010692          210 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVY  288 (503)
Q Consensus       210 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  288 (503)
                      +++.++.+++.      +....++.   .+         +...++.+..++++..          ..+. .+..+++|.+
T Consensus       209 ~~~~~~~p~~~------~~~~~~~~---~~---------~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~  260 (467)
T PRK09556        209 LRYGSDSPEEL------GWGKAEEI---FG---------EPISEEDKETESTDMT----------KWQIFVEYVLKNPVI  260 (467)
T ss_pred             HHhCCCChhhc------CCCChhhc---cc---------CccchhhhccccccCc----------HHHHHHHHHHcChHH
Confidence            66655432211      11000000   00         0000000000000000          0011 2346789999


Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA  367 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~  367 (503)
                      |...+..++......++..|+|.|+++.+|.+.... .......++.+++.++.|+++||+++|+     ..........
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~  335 (467)
T PRK09556        261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR-----ALVACIALAL  335 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-----hHHHHHHHHH
Confidence            998888888888888888999999998888886554 4456677889999999999999999883     3322222211


Q ss_pred             HH-HHHHH-HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh----
Q 010692          368 IS-CLTAF-CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD----  441 (503)
Q Consensus       368 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~----  441 (503)
                      .. .+... ..++.+...+..++.+++.............+..|++.+|++.|+.+...++.|.+++|.+.|++.|    
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~  415 (467)
T PRK09556        336 IIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKN  415 (467)
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccc
Confidence            11 11111 1123333333334444332222222334566888889999999999988887576889999999999    


Q ss_pred             --------hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692          442 --------HVNNWRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       442 --------~~g~~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                              ..+ |+..|++..++.+++.+..+...
T Consensus       416 g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        416 GTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             ccccccccccC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence                    444 88888888777777766555443

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=1.4e-38  Score=304.39  Aligned_cols=346  Identities=16%  Similarity=0.110  Sum_probs=267.5

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      .+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++++++|++.++++|+++|++
T Consensus        31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~  110 (390)
T PRK03545         31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA  110 (390)
T ss_pred             chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      .+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+.+|||+.|++.++++++..+..+...|+.++ 
T Consensus       111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~-  189 (390)
T PRK03545        111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS-  189 (390)
T ss_pred             HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC-
Confidence            9989999999999999999999999999999999999999999999998999999999998887776666555554211 


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN  299 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (503)
                           +++..                                              .++.++.+|+|.++......++..
T Consensus       190 -----~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~  218 (390)
T PRK03545        190 -----EHSGS----------------------------------------------LKSLPLLFRRPALVSLYLLTVVVV  218 (390)
T ss_pred             -----CCcch----------------------------------------------HHHHHHHHhCcHHHHHHHHHHHHH
Confidence                 00000                                              023456778888876655555555


Q ss_pred             HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS  378 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (503)
                      ........+.+.++++..+.+.... .+.....++.+++.++.+++.||+++|     .......+.......+....++
T Consensus       219 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~  293 (390)
T PRK03545        219 TAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANS  293 (390)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhch
Confidence            5555556677778887777775444 444566788899999999999999876     4444433333333333333344


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF  458 (503)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~  458 (503)
                      .+......++.+++.....+.......+.. |+.++++.|+.+...+. |..+||.+.|++.|..| ++..+...+.+.+
T Consensus       294 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~  370 (390)
T PRK03545        294 EWHLSVLSIFWGIAIMCIGLAMQVKVLKLA-PDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALAL  370 (390)
T ss_pred             HHHHHHHHHHHHHHHhcchHHHHHHHHHhC-CCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHH
Confidence            455555555555555444444555555554 57889999999888777 88889999999999987 7777877776666


Q ss_pred             HHHHHHH
Q 010692          459 LAAGIWF  465 (503)
Q Consensus       459 ~~~~~~~  465 (503)
                      ++.+...
T Consensus       371 ~~~~~~~  377 (390)
T PRK03545        371 AALVWSI  377 (390)
T ss_pred             HHHHHHH
Confidence            5555443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=3.9e-39  Score=309.05  Aligned_cols=395  Identities=15%  Similarity=0.154  Sum_probs=270.7

Q ss_pred             cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692           33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV  112 (503)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~  112 (503)
                      |....++++..+.+.++....+...    +.+++|+|++.++.|++.+++.+++++++++.|+++||+|||+++..++++
T Consensus         7 ~~~~~~~~~~~~~~~~d~~~~~~~~----~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~   82 (412)
T TIGR02332         7 RRLIIFLFILFIFSFLDRINIGFAG----LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL   82 (412)
T ss_pred             hHHHHHHHHHHHHHHhhhhhHHHHH----HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence            4444444444444444333433333    667899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-----
Q 010692          113 WTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-----  187 (503)
Q Consensus       113 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-----  187 (503)
                      ++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|.++++++++++.+     
T Consensus        83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~  162 (412)
T TIGR02332        83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM  162 (412)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999988763     


Q ss_pred             -cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCc-ccccccccccccccCcccCCCCCccccccchhhhhhhhcccch
Q 010692          188 -HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP-AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE  265 (503)
Q Consensus       188 -~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (503)
                       ..|||+.|++.++++++..++.+++.||++++.+- ++++++.. +   +..+....  +..+. +   ...+++..  
T Consensus       163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~-~---~~~~~~~~--~~~~~-~---~~~~~~~~--  230 (412)
T TIGR02332       163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKAL-K---EMIDNDQL--TLEQP-E---GAFAHAAM--  230 (412)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHH-H---HHHHhccc--ccccc-c---cccccccc--
Confidence             46999999999998888777777777775533110 00000000 0   00000000  00000 0   00000000  


Q ss_pred             hhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhh-cccchhh-HHHHHhhhhhhhhchhhhhh
Q 010692          266 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNAD-MMFGGVTIVCGIVGTISGGF  343 (503)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~g~  343 (503)
                              .....++.++ ++.+|...+..++.....+.+.+|+|.++++. .+.+... ..+.....++.+++.++.|+
T Consensus       231 --------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~  301 (412)
T TIGR02332       231 --------PQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSR  301 (412)
T ss_pred             --------cHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHH
Confidence                    0002234444 47788777777777788888899999999873 3555433 34557778889999999999


Q ss_pred             hhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHH
Q 010692          344 ILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS  423 (503)
Q Consensus       344 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  423 (503)
                      ++||+++|+    ........+......+.....+........++..++.....+.......+..|++.|+++.|+.+..
T Consensus       302 l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~  377 (412)
T TIGR02332       302 HSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINAT  377 (412)
T ss_pred             HhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHh
Confidence            999999772    2222222222222222222222222221222222222222222223334567789999999999999


Q ss_pred             HhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       424 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      .++ |++++|.+.|.+.|..|+|...+.+.+++.
T Consensus       378 ~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       378 GNI-GSALSPFLIGILKDATGSFNSGLWFVAALL  410 (412)
T ss_pred             hhh-hhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence            888 999999999999999888888877665543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=2.5e-38  Score=306.14  Aligned_cols=375  Identities=14%  Similarity=0.153  Sum_probs=264.8

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV  138 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~  138 (503)
                      ..+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.|+
T Consensus        44 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~  123 (434)
T PRK11663         44 AAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAF  123 (434)
T ss_pred             HhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            34477789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692          139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK  218 (503)
Q Consensus       139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~  218 (503)
                      +.|...+...+++.|++|+++|++++++++.+.++|..+++.+++.+.+.+|||+.|++.+++.++..+...+..||.++
T Consensus       124 ~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~  203 (434)
T PRK11663        124 FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQ  203 (434)
T ss_pred             HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence            99988999999999999999999999999999999999999999999988999999999988877666555555565432


Q ss_pred             CCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHH-HHHhhhhhHHHHHHHHHH
Q 010692          219 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT-KVLLQEKVYVVNVLGYIA  297 (503)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  297 (503)
                      +...++..++..     +          . ++  ...+. +++..       ..+   +.+ +..++++.+|...+..++
T Consensus       204 ~~~~~~~~~~~~-----~----------~-~~--~~~~~-~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~  254 (434)
T PRK11663        204 AMGLPSVGEWRH-----D----------A-LE--LAQQQ-EGAGL-------SRK---EILTKYVLLNPYIWLLSFSYVL  254 (434)
T ss_pred             hcCCCCcccccc-----c----------c-cc--cchhc-cccCC-------Chh---hhHHHHHhcChHHHHHHHHHHH
Confidence            211111000000     0          0 00  00000 00000       000   111 135678888888777777


Q ss_pred             HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      .......+..|+|.|+.+..|.+.... .......++.++++++.|++.||+.++.+.................+.....
T Consensus       255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  334 (434)
T PRK11663        255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF  334 (434)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc
Confidence            777777788899999987788886544 4556777889999999999999984332111011111111111111111111


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      .+........+..+++.............+..|++.|+++.|+.+...++ |.+++|.+.|++.|..| +...|.+.+++
T Consensus       335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f~~~~~~  412 (434)
T PRK11663        335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLEIWH-WTGFFVVISIA  412 (434)
T ss_pred             ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHHhcc-cHHHHHHHHHH
Confidence            22222222222222222111122334556777789999999999988888 98999999999999887 87888887777


Q ss_pred             HHHHHHHH
Q 010692          457 FFLAAGIW  464 (503)
Q Consensus       457 ~~~~~~~~  464 (503)
                      .+++.+..
T Consensus       413 ~~~~~~~~  420 (434)
T PRK11663        413 AGISALLL  420 (434)
T ss_pred             HHHHHHHH
Confidence            66655444

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=1.1e-37  Score=292.47  Aligned_cols=349  Identities=12%  Similarity=0.029  Sum_probs=255.5

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      .+|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+....++|++.++++|+++|++
T Consensus        13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g   92 (368)
T TIGR00903        13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG   92 (368)
T ss_pred             hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH
Confidence            33888999999999999999999999999999999999999999987766555555443333347999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      .+. .+.....++|++|+++|++++++.+.+..+|.++++++++++.+.+|||+.|++.++++++..++.++..||++++
T Consensus        93 ~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~  171 (368)
T TIGR00903        93 QPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQ  171 (368)
T ss_pred             hHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            986 4566677799999999999999999999999999999999999999999999999998888888777777774322


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN  299 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (503)
                      .+     +..                   +   .  .                 +..+++++++++|.+|...+..++..
T Consensus       172 ~~-----~~~-------------------~---~--~-----------------~~~~~~~~ll~~~~~~~~~~~~~~~~  205 (368)
T TIGR00903       172 AA-----EGF-------------------G---F--K-----------------DAVKEFGALAGRKDLWIIGAILGFGV  205 (368)
T ss_pred             CC-----CCc-------------------c---h--H-----------------HHHHHHHHHHcChhHHHHHHHHHHHH
Confidence            10     000                   0   0  0                 00123567889999999999999999


Q ss_pred             HHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      ...+++.+|+|.|+++ .+.+........+..+.   +.+..+++.||..||..+. .......++..+.........+.
T Consensus       206 ~~~~~~~~wlp~~L~~-~g~s~~~~~~~~l~~~~---g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~~~~  280 (368)
T TIGR00903       206 ALFDNLAIWLEAALRP-AGLEDIAGDAVALAILA---GLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFELNR  280 (368)
T ss_pred             HHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHH---HHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHcccc
Confidence            9999999999999976 45664433333343443   3444688999987653221 22222222222222222222333


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL  459 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  459 (503)
                      +..+...++.+++....++..+.+..|.+|++.|+++.|+.+...++ +++.+|.+.+.+..  + ....|.+.++..++
T Consensus       281 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i  356 (368)
T TIGR00903       281 LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYFTFLAILITI  356 (368)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHHHHHHHHHHH
Confidence            33344445555555566666778889999999999999999999998 88778988887774  3 44567766666655


Q ss_pred             HHHHH
Q 010692          460 AAGIW  464 (503)
Q Consensus       460 ~~~~~  464 (503)
                      +.+..
T Consensus       357 ~~~~~  361 (368)
T TIGR00903       357 AFAIA  361 (368)
T ss_pred             HHHHH
Confidence            55543

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-38  Score=286.93  Aligned_cols=377  Identities=33%  Similarity=0.530  Sum_probs=288.6

Q ss_pred             hhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH
Q 010692           29 KSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV  108 (503)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~  108 (503)
                      .++.++.+.++++...+..++...    .+..++.+++.||++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+
T Consensus        28 ~~~~~~~l~il~~vnlmny~Dr~~----iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v  103 (493)
T KOG1330|consen   28 MKSPTLTLVILCLVNLMNYADRYT----IAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV  103 (493)
T ss_pred             cccchHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence            334455555666666666654333    3334488899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692          109 GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH  188 (503)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~  188 (503)
                      |..++.++.++++++..||++.++|.+.|+|.+...|..+++++|.+|.++|++++++++.+..+|..+|.+.+..+.+.
T Consensus       104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~  183 (493)
T KOG1330|consen  104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL  183 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             ch-hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh
Q 010692          189 LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR  267 (503)
Q Consensus       189 ~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (503)
                      .+ |||.|++.++++++.+++.+++.+|..++..++.+.+..                       .              
T Consensus       184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----------------------~--------------  226 (493)
T KOG1330|consen  184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----------------------M--------------  226 (493)
T ss_pred             ccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----------------------C--------------
Confidence            66 999999999999999999999887643321100000000                       0              


Q ss_pred             hhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhccc---c-hhhHHHHHhhhhhhhhchhhhhh
Q 010692          268 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM---S-NADMMFGGVTIVCGIVGTISGGF  343 (503)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~g~  343 (503)
                       .+...+.+++.+.+.+++.+....+......+...++..|.|.+....+.+   + .....+..+...++.+|.+++|.
T Consensus       227 -~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggi  305 (493)
T KOG1330|consen  227 -VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGI  305 (493)
T ss_pred             -CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHH
Confidence             011233457788888888888888888888888888899988866554322   2 23456778888999999999999


Q ss_pred             hhhcccccchhhH-----HHH-HHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692          344 ILDQMGATISNAF-----KLL-SAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL  415 (503)
Q Consensus       344 l~d~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (503)
                      ++||+.++.++..     .+. ..+...++.+..+....  .+.+..++++++........+.+...+..+.+||+.|.+
T Consensus       306 isd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~  385 (493)
T KOG1330|consen  306 ISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTT  385 (493)
T ss_pred             HHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccH
Confidence            9999655332211     111 11122222222222211  233444444444444445667777788889999999999


Q ss_pred             HHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692          416 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR  447 (503)
Q Consensus       416 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~  447 (503)
                      +.++...+...+|.+.+|.+.|.+.|..-+++
T Consensus       386 a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  386 AYALDTVFEHIFGDAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             HHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence            99999999999999988989999999876565

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=1.8e-36  Score=289.29  Aligned_cols=349  Identities=12%  Similarity=-0.026  Sum_probs=260.5

Q ss_pred             CCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010692           55 PPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM  134 (503)
Q Consensus        55 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~  134 (503)
                      ...++.+|.+++|+|+|.++.|++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++++++|++.++++|+
T Consensus        26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~  105 (393)
T PRK09705         26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL  105 (393)
T ss_pred             hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence            33445558889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++.+.++. +||+.+.+.++..++..+..++..
T Consensus       106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~  184 (393)
T PRK09705        106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS  184 (393)
T ss_pred             HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999997 67999999999999999999999999988775 899998877665544333222221


Q ss_pred             ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692          214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      ++.++     ++++..                                               ...++.+++++.|...+
T Consensus       185 ~~~~~-----~~~~~~-----------------------------------------------~~~~~~l~~~~~~~l~~  212 (393)
T PRK09705        185 AREVA-----SSHKTT-----------------------------------------------TTPVRVVFTPRAWTLGV  212 (393)
T ss_pred             cCCCc-----cccCCC-----------------------------------------------cCCcccccCHhHHHHHH
Confidence            11100     000000                                               00112335566676666


Q ss_pred             HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692          294 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT  372 (503)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (503)
                      ..++....+.....|.|.++++ .+.+.... ....+..++.++++++.+++.||+++|     +....+..+.......
T Consensus       213 ~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~  286 (393)
T PRK09705        213 YFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCG  286 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHH
Confidence            6666667777888899999987 67776544 455677889999999999999999987     5554444443333332


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      ....+..... ...++.+++.+...+.......+..+ ++++++..|+.+...+. +..++|.+.|++.|..|++...+.
T Consensus       287 ~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~~  364 (393)
T PRK09705        287 FIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDWA  364 (393)
T ss_pred             HHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHH
Confidence            2222211111 12234455555555655556666665 47899999999888888 778899999999999988877787


Q ss_pred             HHHHHHHHHHHHH
Q 010692          452 ALTSIFFLAAGIW  464 (503)
Q Consensus       452 ~~~~~~~~~~~~~  464 (503)
                      +.+++.++..+..
T Consensus       365 ~~~~~~~~~~~~~  377 (393)
T PRK09705        365 FHALCVVGLMIIT  377 (393)
T ss_pred             HHHHHHHHHHHHH
Confidence            7776665554443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=8.1e-37  Score=294.47  Aligned_cols=379  Identities=17%  Similarity=0.145  Sum_probs=273.1

Q ss_pred             cccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHH
Q 010692           31 QSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGL  110 (503)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~  110 (503)
                      ++|..+.+.....+...++....+...    |.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~   87 (406)
T PRK11551         12 RLALTIGLCFLVALLEGLDLQSAGVAA----PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV   87 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence            445455555555555555443444444    6668999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692          111 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN  190 (503)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g  190 (503)
                      ++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  167 (406)
T PRK11551         88 ALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA  167 (406)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhh
Q 010692          191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLN  270 (503)
Q Consensus       191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (503)
                      ||+.|++.+++.++..++..+..||.++...++  .+..                        .      ++.       
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~------------------------~------~~~-------  208 (406)
T PRK11551        168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA--GAGK------------------------Q------RAP-------  208 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc--Ccch------------------------h------hhh-------
Confidence            999999988776666666666666643211000  0000                        0      000       


Q ss_pred             hhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccc
Q 010692          271 QLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMG  349 (503)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~  349 (503)
                          ..+...+..+.+..+...+..++.....+....|.|.++++ .|.++... .......++.+++.++.|++.||++
T Consensus       209 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g  283 (406)
T PRK11551        209 ----VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLR  283 (406)
T ss_pred             ----hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                00000000011222233333344444555667788988877 46665433 4456667888999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692          350 ATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD  429 (503)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  429 (503)
                      +|     +.+...........+.....++.+......++.+++.....+....+..+.+|+++|+++.|+.+...++ |.
T Consensus       284 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~  357 (406)
T PRK11551        284 PR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRL-GS  357 (406)
T ss_pred             HH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhH-HH
Confidence            87     5554443333333333333344444444555555555556677778888999999999999999988887 88


Q ss_pred             ccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          430 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      .++|.+.|++.+..+++...+.....+.+++..+
T Consensus       358 ~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~  391 (406)
T PRK11551        358 MAGPLLAGQLLALGRSTVGVIGASIPVILVAALA  391 (406)
T ss_pred             HHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence            8999999999998766655555555444444433

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=5.9e-37  Score=305.41  Aligned_cols=397  Identities=15%  Similarity=0.138  Sum_probs=275.1

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      +..+|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++.+++.++++++++++.++++|++.|
T Consensus       187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G  266 (742)
T TIGR01299       187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSG  266 (742)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            33447778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------------chhHHHHHHHHHHHHH
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------LNWRYAFWGEAILMLP  204 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------------~gwr~~f~~~~~~~~~  204 (503)
                      ++.++..+...+++.|++|+++|++.++++..++.+|.++++.++..+...             .+||+.+++.++++++
T Consensus       267 ~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll  346 (742)
T TIGR01299       267 FGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVF  346 (742)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999887665432             3699999988877655


Q ss_pred             HHHHHHhccccccCCCCcccccccccccccccCcccCCCC---Cccc----cccchhhhhh-----hhcccch-----hh
Q 010692          205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN---DHVS----EDISDQASER-----SIKSIGE-----SR  267 (503)
Q Consensus       205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~-----~~~~~~~-----~~  267 (503)
                      . ++..+++||++++.....+.++...  ...+....+..   ....    +.++.....+     +++..+.     .+
T Consensus       347 ~-ll~~~~lPESPrwL~~~gr~~eA~~--iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (742)
T TIGR01299       347 A-IGALTFMPESPRFFLENGKHDEAWM--ILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR  423 (742)
T ss_pred             H-HHHHHHcCCCHHHHHHCCCHHHHHH--HHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence            4 4455666887765322111111000  00001100000   0000    0000000000     0000000     00


Q ss_pred             hhhhhhchHHHHHHHhhhhh---HHHHHHHHHHHHHHhhhhhccccchhhhh----c-----------------------
Q 010692          268 FLNQLSQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNI----Y-----------------------  317 (503)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------------  317 (503)
                      ........+.+++.+++.+.   .+.+.+.+++..+.++++..|+|.++.+.    +                       
T Consensus       424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (742)
T TIGR01299       424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN  503 (742)
T ss_pred             hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence            01112223345666665543   33444556777788999999999765431    0                       


Q ss_pred             --------------cc----------------------------------------------------------------
Q 010692          318 --------------HM----------------------------------------------------------------  319 (503)
Q Consensus       318 --------------~~----------------------------------------------------------------  319 (503)
                                    +.                                                                
T Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c  583 (742)
T TIGR01299       504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC  583 (742)
T ss_pred             hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence                          00                                                                


Q ss_pred             ------c----hhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010692          320 ------S----NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG  389 (503)
Q Consensus       320 ------~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (503)
                            +    ........+..++.+++.+++++++||+|||     ++++.+.++.++.+++.....+....++..++.
T Consensus       584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~  658 (742)
T TIGR01299       584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLF  658 (742)
T ss_pred             CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence                  0    0011223455688899999999999999998     777766666666655555555545555555566


Q ss_pred             HHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          390 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +++.+..++....++.+.+|++.|++++|+.+...++ |.+++|++.|.+.+..  ...++++.+++.++++++.+
T Consensus       659 g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~  731 (742)
T TIGR01299       659 GGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILFASAALACGGLLAL  731 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence            6666677788888999999999999999999988888 9999999999887753  34566666666555544444

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=100.00  E-value=9.4e-37  Score=297.52  Aligned_cols=362  Identities=12%  Similarity=0.023  Sum_probs=249.1

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      .+|.+.+|+|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.++++|+++|++
T Consensus        58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~  137 (476)
T PLN00028         58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS  137 (476)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            34778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc----C-----cchhHHHHHHHHHHHHHHHHHHH
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~----~-----~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      .+... ....+++|++|+++|++++++.....++|..+++.+.+.+.    +     ..|||+.|++.+++.++..++.+
T Consensus       138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~  216 (476)
T PLN00028        138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL  216 (476)
T ss_pred             HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence            88654 45678999999999999999998887788877766665442    1     25899999999998887776666


Q ss_pred             hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692          211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV  290 (503)
Q Consensus       211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (503)
                      ++.++.++.     +.+..   +               ++      .+ .++          ....+.+++.++++++|.
T Consensus       217 ~~~~~~p~~-----~~~~~---~---------------~~------~~-~~~----------~~~~~~~~~~~~~~~~~~  256 (476)
T PLN00028        217 TLGQDLPDG-----NYREL---K---------------KS------GT-MPK----------DSFSKVLRYGVTNYRTWI  256 (476)
T ss_pred             HHcCcCCCC-----chhhH---H---------------hc------Cc-ccc----------ccHHHHHHHHHcCchhHH
Confidence            554321110     00000   0               00      00 000          000133556678888887


Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhh-H-HHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA-F-KLLSAATFLGA  367 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~-~~~~~~~~~~~  367 (503)
                      ..+..++.......+..+.|.|+.+..+.+.... .+..+..++.+++++++|+++||+++|...+ + ........+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~  336 (476)
T PLN00028        257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG  336 (476)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence            7776665555566677789999888788886544 5556778899999999999999998764321 1 22222222222


Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh--hhh
Q 010692          368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--VNN  445 (503)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--~g~  445 (503)
                      +..+.....++.+...+.+++.+++.+...+....+..+ +.++.+|++.|+.+..     +.+++.+.+++.+.  .++
T Consensus       337 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~-----g~lg~~i~~~l~~~~~~~~  410 (476)
T PLN00028        337 VFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLTGAG-----GNVGAVLTQLLFFTGSSYS  410 (476)
T ss_pred             HHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhhhcc-----ccHHHHHHHHHHHhcCCcc
Confidence            222222223333333333444444444344444444433 4567899999887543     33355566666553  345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 010692          446 WRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       446 ~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                      |...|++.+++.+++.++.+..+
T Consensus       411 y~~~f~~~~~~~~i~~~~~~~~~  433 (476)
T PLN00028        411 TETGISLMGVMIIACTLPVAFIH  433 (476)
T ss_pred             HhhHHHHHHHHHHHHHHHHHhee
Confidence            88888888887777776666544

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=2.6e-36  Score=293.71  Aligned_cols=374  Identities=13%  Similarity=0.075  Sum_probs=255.8

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G  137 (503)
                      |.+.++ |++..+.|++.+.+.+++++++++.|+++||+|||++++++.++.+++.+++++++    +++.+++.|++.|
T Consensus        53 p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~g  131 (452)
T PRK11273         53 PYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCG  131 (452)
T ss_pred             HHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence            555777 99999999999999999999999999999999999999999999999999888764    7888999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH-HHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      ++.+...+.....+.|++|+++|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.||.
T Consensus       132 i~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~  211 (452)
T PRK11273        132 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDT  211 (452)
T ss_pred             HHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            999988888888999999999999999999999999874 4565544443345999999999988887777777776664


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHH-HHHHhhhhhHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGY  295 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  295 (503)
                      +++...+++++..          ++..     ++.++    ++.++.       ..+   +. .+.+++++.+|...+..
T Consensus       212 ~~~~~~~~~~~~~----------~~~~-----~~~~~----~~~~~~-------~~~---~~~~~~~~~~~~~~~~~l~~  262 (452)
T PRK11273        212 PQSCGLPPIEEYK----------NDYP-----DDYNE----KHEQEL-------TAK---QIFMQYVLPNKLLWYIAIAN  262 (452)
T ss_pred             HhhcCCCChhhhh----------hccc-----ccccc----ccCCCc-------cHH---HHHHHHHHcChHHHHHHHHH
Confidence            3321111000000          0000     00000    000000       000   11 23467889999888877


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      ++.....+....|+|.|+++..+.+.... ....+..++.+++.++.|+++||++++++.  ........+.....+...
T Consensus       263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~  340 (452)
T PRK11273        263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYW  340 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHH
Confidence            77777777888899999998877775443 344566778888999999999999543211  111111111111111111


Q ss_pred             H--hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHH
Q 010692          375 C--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA  452 (503)
Q Consensus       375 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~  452 (503)
                      .  ..+.+.......+.+...............+.+|++.+|++.|+.+...+..+...+|.+.|++.|..| |+..|++
T Consensus       341 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~  419 (452)
T PRK11273        341 LNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMV  419 (452)
T ss_pred             HhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHH
Confidence            1  112222222233333322222222334566888899999999999888777334457999999999987 8888888


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010692          453 LTSIFFLAAGIWFVGI  468 (503)
Q Consensus       453 ~~~~~~~~~~~~~~~~  468 (503)
                      ++++.+++++......
T Consensus       420 ~~~~~~~~~~~~~~~~  435 (452)
T PRK11273        420 MIGGSILAVILLIVVM  435 (452)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            8777676666555444

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=2.6e-36  Score=292.08  Aligned_cols=370  Identities=14%  Similarity=0.041  Sum_probs=241.9

Q ss_pred             CCchhHHHHHHhhhcccCCCCCcccccccccccC---CCccchhhHHH---HHHHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692           36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFK---LNNFQDGVLSS---AFMVGLLVASPIFASLAKSHNPFRLIGVG  109 (503)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~l~~~  109 (503)
                      +...++..+++.++........    +.+.++++   .+..+.+...+   ...++..++++++|+++||+|||+++..+
T Consensus        24 ~~~~~~~~~~~~~d~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~   99 (432)
T PRK10406         24 IVGASSGNLVEWFDFYVYSFCS----LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS   99 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence            3333344555555444433333    55678874   45554444444   44455559999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhHHH--------HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH
Q 010692          110 LSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY  181 (503)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l  181 (503)
                      +++++++++++++++++.        .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|.++++.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~  179 (432)
T PRK10406        100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV  179 (432)
T ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988864        588999999999999999999999999999999999999999998998888877


Q ss_pred             HHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692          182 GGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD  253 (503)
Q Consensus       182 ~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (503)
                      +..+.        ..+|||++|++.++++++... .....||+++.    ++++                          
T Consensus       180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~~~--------------------------  228 (432)
T PRK10406        180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----ETRA--------------------------  228 (432)
T ss_pred             HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----HHhh--------------------------
Confidence            65543        257999999998876654432 22222332110    0000                          


Q ss_pred             hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH-HHHHhhhhhccccchhhhhcccchhhH-HHHHhhh
Q 010692          254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI  331 (503)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  331 (503)
                           .++              ..++++++++++.+...+...+ ....++.+..|+|.|+++..+.+.... ....+..
T Consensus       229 -----~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~  289 (432)
T PRK10406        229 -----LKE--------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAAL  289 (432)
T ss_pred             -----hcc--------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence                 000              0234566778777766555443 355677788899999988777775443 3344555


Q ss_pred             hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH-HHH-Hh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692          332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-CL--SSLYGFLALFTVGELLVFATQAPVNYVCLHS  407 (503)
Q Consensus       332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (503)
                      +...++.++.|+++||++||     +.+.....+..+... ... ..  .+....+....+..+..+...+....+..|.
T Consensus       290 ~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  364 (432)
T PRK10406        290 FVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEM  364 (432)
T ss_pred             HHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66677788889999999988     444433332222211 111 11  1222222222222223333334456677899


Q ss_pred             cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +|++.|+++.|+.+...+.+.+...|.+.+.+ +..|.+...+++.++..+++.+..+
T Consensus       365 fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~  421 (432)
T PRK10406        365 FPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSL  421 (432)
T ss_pred             CCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999998776653344477777754 5556565555555555555444433

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=2.6e-36  Score=292.96  Aligned_cols=379  Identities=14%  Similarity=0.097  Sum_probs=270.5

Q ss_pred             CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHH
Q 010692           57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRML  135 (503)
Q Consensus        57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l  135 (503)
                      .+..++++.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|++
T Consensus        38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l  117 (455)
T TIGR00892        38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI  117 (455)
T ss_pred             hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            455568889999999999999999999999999999999999999999999999999999999999999999875 5799


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      .|++.+...+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..|+
T Consensus       118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~  196 (455)
T TIGR00892       118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV  196 (455)
T ss_pred             HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999998777777888999996 6799999999999999999999999999988999999999998877666555544433


Q ss_pred             ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692          216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY  295 (503)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (503)
                      .......+++.+     +   ..+.....    ++...  ...   .       +..+. ..++ +++++|.++...+..
T Consensus       197 ~~~~~~~~~~~~-----~---~~~~~~~~----~~~~~--~~~---~-------~~~~~-~~~~-~~~~~~~~~~~~~~~  250 (455)
T TIGR00892       197 GPSQRVSKSKSK-----E---GLPPDGST----KKLSK--KST---A-------EKINR-FLDF-SLFTHRGFLVYLSGN  250 (455)
T ss_pred             Cccccccccccc-----c---cCCCCCcc----ccccc--cch---h-------hhhhh-hcch-HHhcCchHHHHHHHH
Confidence            111000000000     0   00000000    00000  000   0       00000 0112 467888888887777


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      ++..........++|.|.++ .+.+.... .+.++.+++.++++++.+++.||...+..+. ..+..+.+......++..
T Consensus       251 ~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~l~~ll~~  328 (455)
T TIGR00892       251 VIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQ-YLFSFALLFNGLTHLLCA  328 (455)
T ss_pred             HHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHH-HHHHHHHHHHHHHHHHHH
Confidence            77777777777888888876 56665444 4456677888888999999999743221111 222222222222222223


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692          375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT  454 (503)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~  454 (503)
                      ..++.+.++...++.+++.+...+.....+.+.+|+++++++.|+.+...++ |.+++|.+.|.+.|..++|...|++.+
T Consensus       329 ~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~  407 (455)
T TIGR00892       329 LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASG  407 (455)
T ss_pred             HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhh
Confidence            3445555555666667776667777788888999999999999999988888 999999999999998877888888877


Q ss_pred             HHHHHHHHHHH
Q 010692          455 SIFFLAAGIWF  465 (503)
Q Consensus       455 ~~~~~~~~~~~  465 (503)
                      ++.+++.+...
T Consensus       408 ~~~li~~~~~~  418 (455)
T TIGR00892       408 SIVVSAGLFLA  418 (455)
T ss_pred             HHHHHHHHHHH
Confidence            76666555443

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=6e-36  Score=288.32  Aligned_cols=374  Identities=18%  Similarity=0.196  Sum_probs=275.7

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|++.+
T Consensus        18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~   97 (399)
T TIGR00893        18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEA   97 (399)
T ss_pred             HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence            55689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..++.++..||.+++.+
T Consensus        98 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (399)
T TIGR00893        98 PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK  177 (399)
T ss_pred             hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc
Confidence            99999999999999999999999999999999999999999999888899999999998887777776666665432211


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                      ..+++++.      ...+..      .++    .+.++++           +......++.+++|+++...+..++....
T Consensus       178 ~~~~~~~~------~~~~~~------~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (399)
T TIGR00893       178 WLTEEEKY------IVVGGL------LAE----QQGKGPS-----------TPKKYQIKELLKDRRVWGLALGQFLVNIG  230 (399)
T ss_pred             cCCHHHHh------hcchhh------ccc----ccccccc-----------CCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence            10000000      000000      000    0000000           00113456778889999888888888888


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH---hh
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS  377 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  377 (503)
                      ...+..+.|.|+++..+.++... .+.....++.+++.++.+++.||+++|+..................+....   .+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (399)
T TIGR00893       231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN  310 (399)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence            88888999999998888876544 445667788899999999999999988411100000111111111111111   11


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      +.+..+....+..+. ....+....+..+..|++.|+++.|+.+...+. |..++|.+.|++.|..|++...+.+.+++.
T Consensus       311 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~  388 (399)
T TIGR00893       311 IPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGSFAGALMVVAALA  388 (399)
T ss_pred             hHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCchhHHHHHHHHHH
Confidence            223333333333333 235677888889999999999999999988887 889999999999998876777887777666


Q ss_pred             HHHHHHH
Q 010692          458 FLAAGIW  464 (503)
Q Consensus       458 ~~~~~~~  464 (503)
                      +++.+..
T Consensus       389 ~~~~~~~  395 (399)
T TIGR00893       389 LIGALSY  395 (399)
T ss_pred             HHHHHHH
Confidence            5555444

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=1.5e-35  Score=282.46  Aligned_cols=336  Identities=14%  Similarity=0.108  Sum_probs=253.5

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      +|++.+++|.++++.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.
T Consensus        43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~  122 (394)
T PRK10213         43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL  122 (394)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence            47789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...+...+++.|++|+++|++++++...+.++|..+||++++.+.+.+|||+.|++.++++++..+......||.++  
T Consensus       123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~--  200 (394)
T PRK10213        123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG--  200 (394)
T ss_pred             HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc--
Confidence            999999999999999999999999999999999999999999999999999999999887766655444444454210  


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                          +++..                                              .++.++.+++|.++...+..++...
T Consensus       201 ----~~~~~----------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~  230 (394)
T PRK10213        201 ----EPSHQ----------------------------------------------KQNTFRLLQRPGVMAGMIAIFMSFA  230 (394)
T ss_pred             ----ccccc----------------------------------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence                00000                                              0123456788888877665555555


Q ss_pred             Hhhhhhccc-cchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692          301 VIGAYSYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS  378 (503)
Q Consensus       301 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (503)
                      .......+. |.|. +..|.++... .......++.+++.++.+++.||.+++     .......+.....+++....++
T Consensus       231 ~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~  304 (394)
T PRK10213        231 GQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSD  304 (394)
T ss_pred             HHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhh
Confidence            555555565 5555 4567776544 444566678888889999999985432     3333333323333333333445


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      .+......++.+++.+...+.....+.+..| ++++.+.+......+. |..+||.+.|++.|..| +...+...+.+.
T Consensus       305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-g~~~G~~l~G~l~~~~g-~~~~~~~~~~~~  380 (394)
T PRK10213        305 KIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQL-ANTCGAAIGGYALDNIG-LTSPLMLSGTLM  380 (394)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhhHHHHHHHHH
Confidence            5555556666777777777777777777775 5566777776666666 88899999999999877 545555554443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=100.00  E-value=3.1e-35  Score=276.74  Aligned_cols=347  Identities=13%  Similarity=0.016  Sum_probs=263.7

Q ss_pred             ccccccccc-ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHH
Q 010692           58 PSWFTPKRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAI  131 (503)
Q Consensus        58 ~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~  131 (503)
                      +++.+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++.+++.+++     ++++.+++
T Consensus        54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli  133 (462)
T PRK15034         54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV  133 (462)
T ss_pred             HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence            333355555 899999999999999999999999999999999999999999999999999999987     89999999


Q ss_pred             HHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc------------------CcchhHH
Q 010692          132 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------------------SHLNWRY  193 (503)
Q Consensus       132 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~------------------~~~gwr~  193 (503)
                      .|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+.                  +..+||.
T Consensus       134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~  212 (462)
T PRK15034        134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN  212 (462)
T ss_pred             HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence            99999998 6688899999999999999999999998777788777666654432                  1345899


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692          194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS  273 (503)
Q Consensus       194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (503)
                      ++++..++.++..++.+++.++.+      +++..                                             
T Consensus       213 ~~~~~~~~~iv~~i~~~~~~~~~~------~~~~~---------------------------------------------  241 (462)
T PRK15034        213 AAWIWVPLLAIATIAAWSGMNDIA------SSRAS---------------------------------------------  241 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcc------ccccC---------------------------------------------
Confidence            998988888777777776653311      00000                                             


Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch
Q 010692          274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS  353 (503)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~  353 (503)
                        .++.+..+|+|+.|...+.+++.+..+.++.+++|.|.++.+... .......+..+...+.++++|+++||+|++  
T Consensus       242 --~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~-~~l~~~~l~~l~~~l~rplgG~LADRiG~~--  316 (462)
T PRK15034        242 --IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDV-NILRLAFFGPFIGAIARSVGGAISDKFGGV--  316 (462)
T ss_pred             --HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHHHHhhHHHHHhcCch--
Confidence              144667899999999999999999999999999999998865321 112223344577888899999999999998  


Q ss_pred             hhHHHHHHHHHHHHHHHHH-HHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-----------------
Q 010692          354 NAFKLLSAATFLGAISCLT-AFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-----------------  410 (503)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  410 (503)
                         +.+..+.....+.... ....     .+.+.....+.....+.+......+-++.+.+|+                 
T Consensus       317 ---~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~  393 (462)
T PRK15034        317 ---RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ  393 (462)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence               5555444433333221 1112     1344444444445566667777777777776663                 


Q ss_pred             ----CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          411 ----SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       411 ----~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                          ++.|.+.|+....... |+++-|.+.|...+.+|++...++.+.+..+++.++..
T Consensus       394 ~~~~~~~g~v~G~v~a~G~~-Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w  451 (462)
T PRK15034        394 REAVTETAAALGFISAIGAV-GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW  451 (462)
T ss_pred             hHHHHHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence                1577889998777777 88888999999999999998888888877776665544

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=6.9e-36  Score=293.33  Aligned_cols=378  Identities=10%  Similarity=0.005  Sum_probs=245.6

Q ss_pred             chhHHHHHHhhhcccCCCCCcccccccccccCCCccc-hhh-----HHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH
Q 010692           38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQ-DGV-----LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS  111 (503)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~  111 (503)
                      ...+..+++.++........    +.+.++|+.+.++ .++     +.++..+++.+++++.|+++||+|||+++.++++
T Consensus        20 ~~~~g~~~~~~d~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~   95 (490)
T PRK10642         20 AASLGNAMEWFDFGVYGFVA----YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV   95 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence            33455666666655544444    5557888644322 222     2577889999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhHHHH--------HHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHH
Q 010692          112 VWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG  183 (503)
Q Consensus       112 ~~~~~~~~~~~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~  183 (503)
                      +++++++++++++|+++        ++++|+++|++.|..++...+++.|++|+++||++.++...+..+|..+|+.+..
T Consensus        96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~  175 (490)
T PRK10642         96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV  175 (490)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999875        7899999999999999999999999999999999999999998888888887665


Q ss_pred             hhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhh
Q 010692          184 VVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA  255 (503)
Q Consensus       184 ~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (503)
                      .+.        ..+|||+.|++.++++++ .++.....||+++.....++.+..            +.     +..    
T Consensus       176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~------------~~-----~~~----  233 (490)
T PRK10642        176 LISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQG------------DR-----EGL----  233 (490)
T ss_pred             HHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhh------------cc-----ccc----
Confidence            432        257999999997765543 333334456643321000000000            00     000    


Q ss_pred             hhhhhcccchhhhhhhhhchHHHHHHHhhh-hhHHH-HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhh
Q 010692          256 SERSIKSIGESRFLNQLSQFSQDTKVLLQE-KVYVV-NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV  332 (503)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  332 (503)
                        .+.++              .++++++++ ++.+. .....++....++.+..|+|.|+++..+.+.... .......+
T Consensus       234 --~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~  297 (490)
T PRK10642        234 --QDGPK--------------VSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI  297 (490)
T ss_pred             --ccccc--------------CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence              00000              112333332 22222 2222334455677778899999988777775433 34455567


Q ss_pred             hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH-HHHHH--HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC
Q 010692          333 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SCLTA--FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK  409 (503)
Q Consensus       333 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (503)
                      +.+++.++.|+++||+|||     +.+..+.+...+ .....  ...++........++.+++.+...+....+..+.+|
T Consensus       298 ~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p  372 (490)
T PRK10642        298 GMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFP  372 (490)
T ss_pred             HHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            7888899999999999998     554444332221 11111  111223333334444444444455556667778899


Q ss_pred             CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          410 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       410 ~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      ++.|+++.|+.+..... ++.++|.+.|++.+..+++...+++..+..+++.+.
T Consensus       373 ~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~  425 (490)
T PRK10642        373 THIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT  425 (490)
T ss_pred             CccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence            99999999986666666 456689999999887654444444444444433333

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=1.1e-35  Score=284.42  Aligned_cols=349  Identities=12%  Similarity=0.029  Sum_probs=262.2

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      +.+.|.+.+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|
T Consensus        23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  102 (377)
T TIGR00890        23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS  102 (377)
T ss_pred             hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44458889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      ++.+...+.....+.+++| ++|++++++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+..+++.++.+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T TIGR00890       103 AGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPP  181 (377)
T ss_pred             HHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence            9999888888888999987 569999999999999999887777777777789999999999988888777766654321


Q ss_pred             CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692          218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA  297 (503)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (503)
                      ++    ++++..                    +.+       .+              ..+.++.++++.++...+..++
T Consensus       182 ~~----~~~~~~--------------------~~~-------~~--------------~~~~~~~~~~~~~~~~~~~~~~  216 (377)
T TIGR00890       182 GQ----LIKTNI--------------------EVS-------VK--------------DYTVWEMLRTPQFWVLYLSFFL  216 (377)
T ss_pred             hh----ccccCc--------------------ccc-------hh--------------hhhHHHHHcCccHHHHHHHHHH
Confidence            11    000000                    000       00              0123456778888777666555


Q ss_pred             HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      ..........+.+.|.++ .+.+.... .+..+..++.+++.++.+++.||++||     +.+..+.....+..+.....
T Consensus       217 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~  290 (377)
T TIGR00890       217 NAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFI  290 (377)
T ss_pred             HhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHc
Confidence            555554455556666554 55554333 455677788899999999999999988     55555544444444333333


Q ss_pred             hh--HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692          377 SS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT  454 (503)
Q Consensus       377 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~  454 (503)
                      ++  ........++.+.+.+...+....+..+.+|+++|+++.|+.+...++ |..++|.+.|.+.|..| |+..+.+.+
T Consensus       291 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f~~~~  368 (377)
T TIGR00890       291 PMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTFIVTG  368 (377)
T ss_pred             ccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHHHHHH
Confidence            32  222223344455555555566677888889999999999999988887 88999999999999877 777777776


Q ss_pred             HHHHHH
Q 010692          455 SIFFLA  460 (503)
Q Consensus       455 ~~~~~~  460 (503)
                      ++.+++
T Consensus       369 ~~~~~~  374 (377)
T TIGR00890       369 AFALTS  374 (377)
T ss_pred             HHHHHh
Confidence            665543

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=7.9e-36  Score=293.03  Aligned_cols=390  Identities=12%  Similarity=0.048  Sum_probs=282.8

Q ss_pred             ccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH
Q 010692           32 SLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS  111 (503)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~  111 (503)
                      +|..+..+++..++...+.+..+...    |++.+|+|.+.++.+|+.+.|.+++.++++++|+++||+|||++++.+.+
T Consensus         4 ~~~~~~~~~~~~~~~~ld~tiv~~a~----p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~   79 (495)
T PRK14995          4 QWLTLVIIVLVYIPVAIDATVLHVAA----PTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGT   79 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            44555666777777777665666555    77789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692          112 VWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN  190 (503)
Q Consensus       112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g  190 (503)
                      +++++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.+++|
T Consensus        80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g  159 (495)
T PRK14995         80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY  159 (495)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999999999999999999998888888887776 67889999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccc-------cccCcccCCCCCccccccchh--------h
Q 010692          191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS-------VSEGSEASNLNDHVSEDISDQ--------A  255 (503)
Q Consensus       191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--------~  255 (503)
                      ||+.|++...++++..++.++..|+.+++.  .++.+......       .....................        .
T Consensus       160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (495)
T PRK14995        160 WGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG  237 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence            999999998888777777777776633211  00000000000       000000000000000000000        0


Q ss_pred             hhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhh
Q 010692          256 SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCG  334 (503)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  334 (503)
                      .....+.        +.+....+ .+++|+|.++...+..++......+...+.|.|+++..|.++... .......++.
T Consensus       238 ~f~~~e~--------~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~  308 (495)
T PRK14995        238 LFIRTQL--------AASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVAS  308 (495)
T ss_pred             HHHHHHh--------cCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence            0000000        00001111 357888888887777777777777888899999999999987655 4445666788


Q ss_pred             hhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC
Q 010692          335 IVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS  411 (503)
Q Consensus       335 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (503)
                      .++.++.|++.||+++|     +.+..+..+..+........   .+.+......++.+++.+...++......+.+|++
T Consensus       309 ~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~  383 (495)
T PRK14995        309 GFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE  383 (495)
T ss_pred             HHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH
Confidence            88999999999999987     55554444443333222221   23344455666777777777788888888899999


Q ss_pred             CchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692          412 LRALSMAISTVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       412 ~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                      +++.+.++.++..++ |..+|+.+.|.+.+.
T Consensus       384 ~~g~~~~~~~~~~~l-G~~~G~ai~g~i~~~  413 (495)
T PRK14995        384 KAAAAGAIETMAYEL-GAGLGIAIFGLLLSR  413 (495)
T ss_pred             hcchHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            999999999988888 888899999888763

>PRK03699 putative transporter; Provisional

Probab=100.00  E-value=5.4e-35  Score=279.72  Aligned_cols=352  Identities=12%  Similarity=0.079  Sum_probs=261.4

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      +..+|++.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|+++|
T Consensus        27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G  106 (394)
T PRK03699         27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLG  106 (394)
T ss_pred             hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence            44447789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK-PL  215 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~  215 (503)
                      ++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+. +..|||+.|++.+++.++..++.++.. |+
T Consensus       107 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~  186 (394)
T PRK03699        107 VVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA  186 (394)
T ss_pred             HhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9999999999999999999999999999999999999999999988765 457999999998887766655443321 11


Q ss_pred             ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692          216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY  295 (503)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (503)
                             +++++..   +        +      +          +.                 .+. ..++.++...+..
T Consensus       187 -------~~~~~~~---~--------~------~----------~~-----------------~~~-~~~~~~~~~~~~~  214 (394)
T PRK03699        187 -------LGKHAPK---A--------D------K----------PV-----------------AKE-KWGIGVLFLAIAA  214 (394)
T ss_pred             -------ccccCcc---c--------c------C----------cc-----------------ccc-cCChHHHHHHHHH
Confidence                   0000000   0        0      0          00                 000 0134555566666


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      ++.....+.+..|.|.|+++.++.++... .+.....++..+++++.+++.||+++|     +.+.....+..+......
T Consensus       215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~  289 (394)
T PRK03699        215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFV  289 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHH
Confidence            66666777888999999988888886544 445667788899999999999999998     555444444444333333


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692          375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT  454 (503)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~  454 (503)
                      ..++.+......++.+++.+..++.......+.. ++.++...+......++ |..++|.+.|++.|..| +...++..+
T Consensus       290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~i~p~~~G~l~~~~g-~~~~~~~~~  366 (394)
T PRK03699        290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTCGTI-GTMLTFVVTSPIVAHFG-LQAALLTAN  366 (394)
T ss_pred             HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHhhhH-HHHHHHHHHHHHHHHhC-chhhhhhhH
Confidence            3344444444455556655555565555555554 44567788888777776 89999999999999887 667777777


Q ss_pred             HHHHHHHHHHHHHHH
Q 010692          455 SIFFLAAGIWFVGIF  469 (503)
Q Consensus       455 ~~~~~~~~~~~~~~~  469 (503)
                      ++.+++.+..+...+
T Consensus       367 ~~~~~~~~~~~~~~~  381 (394)
T PRK03699        367 GLYAVVFVMCILLGF  381 (394)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            766666555544433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=2.7e-34  Score=273.73  Aligned_cols=347  Identities=15%  Similarity=0.161  Sum_probs=252.3

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      .+|.+++|+|.+.++.|++.+.+.+++.++++++|+++||+|||+++..+..+.+++.+++++++|++.+++.|+++|++
T Consensus        25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~  104 (382)
T PRK10091         25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP  104 (382)
T ss_pred             ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence            33777899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      .+...+....++.|++++++|++++++...+..+|..+++++++.+.+..+||+.|++.+++.++..+..++..||.++ 
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~-  183 (382)
T PRK10091        105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD-  183 (382)
T ss_pred             hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc-
Confidence            9988888889999999999999999999999999999999999999988999999999998877776666555565211 


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN  299 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (503)
                           +++..                     .                         +...+.++++..+...+..++..
T Consensus       184 -----~~~~~---------------------~-------------------------~~~~~~~~~~~~~~~~~~~~~~~  212 (382)
T PRK10091        184 -----EAKGG---------------------L-------------------------REQFHFLRSPAPWLIFAATMFGN  212 (382)
T ss_pred             -----ccccC---------------------H-------------------------HHHHHHhcChHHHHHHHHHHHHH
Confidence                 00000                     0                         00112345666665554444443


Q ss_pred             HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH-Hhh
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLS  377 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  377 (503)
                      ........+.+.++.+..|.++... .+.....++.+++.++.+++.||++++     +.+.....+..+..+... ..+
T Consensus       213 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~  287 (382)
T PRK10091        213 AGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGG  287 (382)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHh
Confidence            3444444566667777677776544 445677788999999999999999987     555444444333332222 223


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcc-cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      +.+......++.+.+.....++......+. .+++.++.+.  .+...++ |..+||.+.|++.|..++|...+.+.+++
T Consensus       288 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~  364 (382)
T PRK10091        288 MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALPAALL  364 (382)
T ss_pred             hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence            333333333344443333334333333333 3345555443  3455666 99999999999999776788888887766


Q ss_pred             HHHHHHHHHH
Q 010692          457 FFLAAGIWFV  466 (503)
Q Consensus       457 ~~~~~~~~~~  466 (503)
                      ..+.......
T Consensus       365 ~~~~~~~~~~  374 (382)
T PRK10091        365 SFAAMSSLLL  374 (382)
T ss_pred             HHHHHHHHHH
Confidence            6555554443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=2e-34  Score=277.51  Aligned_cols=360  Identities=13%  Similarity=0.034  Sum_probs=264.4

Q ss_pred             hcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692           30 SQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVG  109 (503)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~  109 (503)
                      +++++....+.+..+...+   ......|.+ +.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+
T Consensus         9 ~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~   84 (406)
T PRK15402          9 RQALLFPLCLVLFEFATYI---ANDMIQPGM-LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAG   84 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHh---hhhhHhcch-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence            3444444444555554444   223333333 777899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc
Q 010692          110 LSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL  189 (503)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~  189 (503)
                      ..+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.+..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~  164 (406)
T PRK15402         85 VAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL  164 (406)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999999999999999999999999999999888889999999999999999999999989999999999999998888


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh
Q 010692          190 NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL  269 (503)
Q Consensus       190 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (503)
                      +||+.|++.+++.++..+..++..||+.+..     ++..                                        
T Consensus       165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----------------------------------------  199 (406)
T PRK15402        165 PWRGMFVLFAALAALSFFGLWRAMPETAGRV-----GEKL----------------------------------------  199 (406)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCCCCccc-----cccc----------------------------------------
Confidence            9999999998888777666555555532110     0000                                        


Q ss_pred             hhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcc
Q 010692          270 NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM  348 (503)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~  348 (503)
                       +.++..++++.++++|.++...+..++..........+.|.++.+..+.++... .......++.+++.++.+++.||+
T Consensus       200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~  278 (406)
T PRK15402        200 -SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR  278 (406)
T ss_pred             -cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             000112446678889998887776666655555666678888888778876544 333444567788899999999999


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHH
Q 010692          349 GATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS  423 (503)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  423 (503)
                      ++|     +.+..+..+...........     .+.+......++.+++.+...+....... ..+++++|++.++.+..
T Consensus       279 ~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~  352 (406)
T PRK15402        279 PLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGML  352 (406)
T ss_pred             CHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHH
Confidence            887     55444443333222222211     12333444455555665555555544443 33458999999999887


Q ss_pred             HhhcccccchhhHHHHHhhhhhH
Q 010692          424 IHIFGDVPSSPLVGVLQDHVNNW  446 (503)
Q Consensus       424 ~~~~g~~~~~~~~g~l~~~~g~~  446 (503)
                      ... +..+|+.+.+++.+..+.+
T Consensus       353 ~~~-~~~~g~~~~~~l~~~~~~~  374 (406)
T PRK15402        353 SML-IFTVGIELSKHAYLGGGNG  374 (406)
T ss_pred             HHH-HHHHHHHHHHhcccCCchH
Confidence            777 8888999999998887744

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=2.6e-35  Score=288.47  Aligned_cols=366  Identities=15%  Similarity=0.154  Sum_probs=262.3

Q ss_pred             ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhhh
Q 010692           67 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        67 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      |++++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.+++.++  .+++.+++.|+++|++.+...
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~  149 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS  149 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence            789999999999999999999999999999999999999999999999999887654  568889999999999999999


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA  223 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~  223 (503)
                      +....++.|++|+++|++++++...+..+|.++++++++.+.+. .|||+.|++.++++++..++.+++.|+.++..+. 
T Consensus       150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~-  228 (465)
T TIGR00894       150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC-  228 (465)
T ss_pred             hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC-
Confidence            99999999999999999999999999999999999999999988 4999999999998877777666666553321100 


Q ss_pred             cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692          224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG  303 (503)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (503)
                      ++++     +              .+.+++..++++++. .          ...+++++++++.+|...+..++.....+
T Consensus       229 ~~~~-----~--------------~~~i~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (465)
T TIGR00894       229 ISKF-----E--------------KKYINSSLQGQKGST-R----------QSLPIKAIPKSLPVWAIWFAIFGHFWLYT  278 (465)
T ss_pred             CCHH-----H--------------HHHHHhhcccccCCC-C----------CCCCHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            0000     0              000000000000000 0          01246778899999999998888888888


Q ss_pred             hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHH----HHHHHHHHHHHHHH-HHHH-h
Q 010692          304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLGAISCL-TAFC-L  376 (503)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~-~  376 (503)
                      .+.+|+|.|+++..+.+.... ....+..++.+++.+++|++.||+++|+...+.    .............. .... .
T Consensus       279 ~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (465)
T TIGR00894       279 ILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS  358 (465)
T ss_pred             HHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999888886544 455677888999999999999998755322111    11111111111111 1111 1


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh--hhHHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALT  454 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~  454 (503)
                      .+.+..+..+++.+.+.+...+.......+ ..|+.+|.+.|+.+....+ |.+++|.+.|++.+..  +.|...|.+.+
T Consensus       359 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~  436 (465)
T TIGR00894       359 AAFYLTIIILTLANAVSSGPLAGVLINSLD-LAPRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMA  436 (465)
T ss_pred             CchHHHHHHHHHHHHHhhhhhhhhhhchhh-cChhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHH
Confidence            233333334444444433333333333334 4456899999999988887 8888999999887753  55777777777


Q ss_pred             HHHHHHHHHHH
Q 010692          455 SIFFLAAGIWF  465 (503)
Q Consensus       455 ~~~~~~~~~~~  465 (503)
                      +..+++.++..
T Consensus       437 ~~~~i~~i~~~  447 (465)
T TIGR00894       437 FVNILCVIFYL  447 (465)
T ss_pred             HHHHHHHHHee
Confidence            66666554443

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=4.9e-35  Score=282.59  Aligned_cols=384  Identities=11%  Similarity=0.064  Sum_probs=260.1

Q ss_pred             cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692           33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV  112 (503)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~  112 (503)
                      |.......+..+.+.++....    +...+.+++++|++..+.+++.+++.++..+++++.|+++||+|||++++.+.++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~   86 (405)
T TIGR00891        11 WNAFSAAWLGWLLDAFDFFLV----ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL   86 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            333333344444444433333    3333777899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--
Q 010692          113 WTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--  190 (503)
Q Consensus       113 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--  190 (503)
                      .+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+  
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~  166 (405)
T TIGR00891        87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG  166 (405)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999887665  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhh
Q 010692          191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLN  270 (503)
Q Consensus       191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (503)
                      ||+.|++.++..++.. +.....||+++..+++++++..                  .+..++....+...+       .
T Consensus       167 w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-------~  220 (405)
T TIGR00891       167 WRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------------RTMVDILYGGEHRIA-------N  220 (405)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------------hhHHHHHhccchhhh-------h
Confidence            9999988765544433 3333345532211000000000                  000000000000000       0


Q ss_pred             hhhchHHHHHHHh-hh-hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc
Q 010692          271 QLSQFSQDTKVLL-QE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ  347 (503)
Q Consensus       271 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~  347 (503)
                      ..++.....+... ++ +.+...................+.|.|+.+..+.+.... .+.....++.+++.++.+++.||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr  300 (405)
T TIGR00891       221 IVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW  300 (405)
T ss_pred             hhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000001111111 11 112222333333344455666788999988788876544 44566778889999999999999


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          348 MGATISNAFKLLSAATFLGAISCLT-AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      +++|     +.+..+.......... .....+.+......++.+++.....+.....+.+..|++.|+++.|+.+...++
T Consensus       301 ~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  375 (405)
T TIGR00891       301 LGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL  375 (405)
T ss_pred             hCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence            9988     5554444433222222 222233333333334455555556667777888999999999999999888888


Q ss_pred             cccccchhhHHHHHhhhhhHHHHHHH
Q 010692          427 FGDVPSSPLVGVLQDHVNNWRKTTLA  452 (503)
Q Consensus       427 ~g~~~~~~~~g~l~~~~g~~~~~~~~  452 (503)
                       |..++|++.|++.|..|.|...+..
T Consensus       376 -g~~~g~~~~g~l~~~~g~~~~~~~~  400 (405)
T TIGR00891       376 -GGALAPIIGALLAQRLDEYGTALAS  400 (405)
T ss_pred             -HHHHHHHHHHHHHHhccccchhHHh
Confidence             8888999999999998866554443

>PRK09952 shikimate transporter; Provisional

Probab=100.00  E-value=2.8e-34  Score=277.84  Aligned_cols=351  Identities=12%  Similarity=0.089  Sum_probs=237.7

Q ss_pred             cccc--CCCccchhhHH-----HHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHH--------HH
Q 010692           65 RGDF--KLNNFQDGVLS-----SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SI  129 (503)
Q Consensus        65 ~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l  129 (503)
                      .+++  +.++. .+++.     ++..++..+++++.|+++||+|||+++..+.++++++++++++++|++        .+
T Consensus        50 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  128 (438)
T PRK09952         50 NREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLL  128 (438)
T ss_pred             HHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence            4444  56655 45553     345567789999999999999999999999999999999999999987        58


Q ss_pred             HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc--------CcchhHHHHHHHHHH
Q 010692          130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAIL  201 (503)
Q Consensus       130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~  201 (503)
                      +++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+++..+...+.        ..+|||++|++.+++
T Consensus       129 ~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~  208 (438)
T PRK09952        129 VTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVL  208 (438)
T ss_pred             HHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999887776654        257999999988776


Q ss_pred             HHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHH
Q 010692          202 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV  281 (503)
Q Consensus       202 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (503)
                      .++. +......||+++..+.+++.+                              +.+++.             ...+.
T Consensus       209 ~l~~-~~l~~~~~es~~~~~~~~~~~------------------------------~~~~~~-------------~~~~~  244 (438)
T PRK09952        209 VLIA-LWVRNGMEESAEFEQQQHEQA------------------------------AAKKRI-------------PVIEA  244 (438)
T ss_pred             HHHH-HHHHHhCCCChhHHHHHhhcc------------------------------cccccC-------------CHHHH
Confidence            5432 222222233221100000000                              000000             01123


Q ss_pred             HhhhhhHHHHHH-HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          282 LLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       282 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      ++++|+.+...+ ..++.....+....|.|.|+++..+.+.... ....+..+..+++.++.|+++||++||     +.+
T Consensus       245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~  319 (438)
T PRK09952        245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVY  319 (438)
T ss_pred             HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHH
Confidence            445665555443 3444455666777889999988778775433 233445566778888999999999998     555


Q ss_pred             HHHHHHHHHHHHHHHH---hh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692          360 SAATFLGAISCLTAFC---LS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL  435 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~  435 (503)
                      ..+.++..+..+....   .. ..+..+...++.+++.+...+....+..|.+|++.|+++.|+.+.....+|+.++|.+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i  399 (438)
T PRK09952        320 ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI  399 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence            4444333322221111   11 2222233334445555555666778888999999999999997766664477889999


Q ss_pred             HHHHHhhh-hhHHHHHHHHHHHHHHHHHHHH
Q 010692          436 VGVLQDHV-NNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       436 ~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .+++.|.. ++|...+.+.+++.+++.+..+
T Consensus       400 ~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~  430 (438)
T PRK09952        400 AAALVTYFGGSWHSVAIYLLAGCLISAMTAL  430 (438)
T ss_pred             HHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            99998865 3466666666666555555444

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=2.9e-34  Score=275.89  Aligned_cols=358  Identities=13%  Similarity=0.077  Sum_probs=250.4

Q ss_pred             hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692           40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG  119 (503)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~  119 (503)
                      ....++...+.+...+..|.+   +++++|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.++
T Consensus        21 ~~~~~~~~~~~~~~~~~l~~~---i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~   97 (399)
T PRK05122         21 VMFTFISYLTIGLPLAVLPGY---VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL   97 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence            333444444333444444322   47899999999999999999999999999999999999999999999998888776


Q ss_pred             hhhh--------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692          120 CGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW  191 (503)
Q Consensus       120 ~~~~--------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw  191 (503)
                      ++++        .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++.+.+.+||
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~  177 (399)
T PRK05122         98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL  177 (399)
T ss_pred             HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence            6554        25778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhh
Q 010692          192 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ  271 (503)
Q Consensus       192 r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (503)
                      |+.+++.+++.++..+.. ...|+..     ++++++                                           
T Consensus       178 ~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~-------------------------------------------  208 (399)
T PRK05122        178 AGLGLLIMLLALLGLLLA-RPRPAVP-----PVKGER-------------------------------------------  208 (399)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcCCCCC-----CCCccc-------------------------------------------
Confidence            999888766544332221 1111100     000000                                           


Q ss_pred             hhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhccccc
Q 010692          272 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT  351 (503)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~  351 (503)
                           .+.++.++  ..+.......+....+.....+.|.|+.+. +.+.. ........++.+++.++.+++.||+++|
T Consensus       209 -----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~~~  279 (399)
T PRK05122        209 -----LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GWDGA-ALALTLFGVAFVGARLLFGNLINRLGGL  279 (399)
T ss_pred             -----hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccc-hHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence                 00111111  111111122223334444556677776653 43322 2233456677788899999999999987


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccccc
Q 010692          352 ISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP  431 (503)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~  431 (503)
                           +.+..+..+...........++.+..+...++.+++.+..++.......+..|++.||++.|+.+...+. |..+
T Consensus       280 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~  353 (399)
T PRK05122        280 -----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGI  353 (399)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHH
Confidence                 5555544444444444444455555555566677766666666666777888889999999999888887 8777


Q ss_pred             chhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          432 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       432 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +|.+.|++.+..| ++..+++.+++.+++.++..
T Consensus       354 ~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~  386 (399)
T PRK05122        354 TGPLAGLVASWFG-YPSIFLAAALAALLGLALTW  386 (399)
T ss_pred             HHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHH
Confidence            8889999999877 77888877776666554443

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=8e-35  Score=282.45  Aligned_cols=339  Identities=15%  Similarity=0.126  Sum_probs=239.5

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      .+.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|+++|++.
T Consensus        41 ~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  120 (426)
T PRK12307         41 MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGM  120 (426)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            36778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.++||+.|++..+..++ .+......||+.+. 
T Consensus       121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~-  198 (426)
T PRK12307        121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEW-  198 (426)
T ss_pred             hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHH-
Confidence            9999999999999999999999999999999999999999999999889999999885543222 21111111321110 


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH---
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA---  297 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  297 (503)
                         ++++..          +.+.                +++..       .+....+++++++++.++........   
T Consensus       199 ---~~~~~~----------~~~~----------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
T PRK12307        199 ---EEAKLS----------GKGK----------------HSQSA-------WSVFSLSMKGLFNRAQFPLTLCVFIVLFS  242 (426)
T ss_pred             ---HHhhhh----------cccc----------------ccccc-------hhhhhHHHHHHHhhchHHHHHHHHHHHHH
Confidence               000000          0000                00000       00011245667777776654433222   


Q ss_pred             HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      .....+.+..++|.|+++. +.++... .......++.+++.++.+++.||++||     +.+..+.++..+..+.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~  316 (426)
T PRK12307        243 IFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRI  316 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHH
Confidence            2223334567888888774 6665433 444566788899999999999999987     55555554444333322222


Q ss_pred             hhHHHHHHHHHHHHHHH--hhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          377 SSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      ..........++.+...  ....+..+..+.+.+|++.||++.|+.+...+. |+.++|.+.|++.+..|
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g  385 (426)
T PRK12307        317 PQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAATWLGITMG  385 (426)
T ss_pred             ccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence            21111111222222211  122334556778889999999999999888888 88889999999999877

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=2.5e-34  Score=273.67  Aligned_cols=335  Identities=16%  Similarity=0.107  Sum_probs=260.9

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRMLV  136 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~  136 (503)
                      |.+..+++.++.+.+++.+++.++..++++++|+++||+|||++++.+.++.+++.++.++++     +++.+++.|+++
T Consensus        23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  102 (365)
T TIGR00900        23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL  102 (365)
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence            445688999999999999999999999999999999999999999999999999999988888     999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++.++..++..+..+...+++
T Consensus       103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (365)
T TIGR00900       103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPE  182 (365)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999999999999999989999999998877665555444433211


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      .+.   +++++ .                      ++                +..++..+.++.++++|.++...+..+
T Consensus       183 ~~~---~~~~~-~----------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (365)
T TIGR00900       183 LAA---SEIQA-L----------------------SN----------------AVLRDTREGIKFVLKNPLLRTLLLLAL  220 (365)
T ss_pred             CCC---ccccc-c----------------------ch----------------hHHHHHHhHHHHHHcCcHHHHHHHHHH
Confidence            000   00000 0                      00                000111234566778888888777666


Q ss_pred             HHHHHhhhhh-ccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       297 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      +......... .+.|.+.++.++.++... .+.....++.+++.++.+++.||.+++     +.+..+..+.........
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~  295 (365)
T TIGR00900       221 LFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVVG  295 (365)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHH
Confidence            6666665555 788888887777776544 444566788889999999999999887     555544444443333333


Q ss_pred             Hhhh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          375 CLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       375 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      ..++ .+...+..++.+++.+...+....+..+.+|++.|+++.|+.+...+. +..++|.+.|++.|..|
T Consensus       296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g  365 (365)
T TIGR00900       296 LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG  365 (365)
T ss_pred             hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence            3332 555566667777777777778888899999999999999999988888 88889999999998653

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.6e-34  Score=256.85  Aligned_cols=351  Identities=15%  Similarity=0.112  Sum_probs=284.5

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH---HHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---FWSIAICRM  134 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~  134 (503)
                      +++-+.+.+|+|+|+.|.+++.++..+..++..++.|.+.||||.|++..++.++..+-.+..+++.+   +|++++.++
T Consensus        34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl  113 (417)
T COG2223          34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL  113 (417)
T ss_pred             HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence            44446678999999999999999999999999999999999999999999999999999999998854   559999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch---hHHHHHHHHHHHHHHHHHHHh
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~  211 (503)
                      +.|++.+ .+....+++++|||++++|.++|++. ..|+|..+...++..+....|   ||....+..+..++..++.++
T Consensus       114 l~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~  191 (417)
T COG2223         114 LLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL  191 (417)
T ss_pred             HHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987 67788999999999999999999999 999999999999999988888   999999999888888888887


Q ss_pred             ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchH-HHHHHHhhhhhHHH
Q 010692          212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS-QDTKVLLQEKVYVV  290 (503)
Q Consensus       212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  290 (503)
                      ...+.++.      +...                                           ++.. ..++.++++++.|.
T Consensus       192 ~~~d~p~~------r~~~-------------------------------------------~~~~~~~~~~v~~~~~~W~  222 (417)
T COG2223         192 GMNDVPEH------RASV-------------------------------------------KPQLPAQLKAVFSNKDTWL  222 (417)
T ss_pred             HhCCChhh------hccc-------------------------------------------cccchhHHHHHhcCcchHH
Confidence            76442221      1000                                           0000 33667889999999


Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      +.+.++..+..+.++..++|.|++++++.++..+ .++......+.+.++++|+++||+|.+     +........+++.
T Consensus       223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~  297 (417)
T COG2223         223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFVGMALA  297 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHHHHHHH
Confidence            9999999999999999999999999999997665 566777788888999999999999988     4544444444433


Q ss_pred             HHHHHHh-------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692          370 CLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       370 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                      .......       .+.......+.....+.+......+.++...+ +++.|.+.|+.....++ |+..-|...|...+.
T Consensus       298 ~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~l-GGf~lp~~~g~~~~~  375 (417)
T COG2223         298 AALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGL-GGFFLPLAFGVSLDL  375 (417)
T ss_pred             HHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccc-cccchhHHHHHHHHh
Confidence            3333322       23445555555666677777777777777665 45789999999877777 888889999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH
Q 010692          443 VNNWRKTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       443 ~g~~~~~~~~~~~~~~~~~~~~~~  466 (503)
                      +|++...|+++..+.+++.+....
T Consensus       376 tg~~~~~f~~~~~~~~~a~v~~~~  399 (417)
T COG2223         376 TGSYTGAFMLLLAFYLVALVLTWA  399 (417)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHH
Confidence            998989999888887777665543

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=100.00  E-value=1.5e-34  Score=276.58  Aligned_cols=355  Identities=15%  Similarity=0.172  Sum_probs=258.9

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+
T Consensus        19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   98 (379)
T TIGR00881        19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQG   98 (379)
T ss_pred             HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence            66689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH-HHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      ...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.++..++.++..||.++..
T Consensus        99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (379)
T TIGR00881        99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC  178 (379)
T ss_pred             ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc
Confidence            99999999999999999999999999999999999999 57777777889999999999888777777776666543321


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                      ..++.++..              .++.++    ..+.++++.          +......+.++++|.++...+..++...
T Consensus       179 ~~~~~~~~~--------------~~~~~~----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (379)
T TIGR00881       179 GLPPAEEMP--------------NEEPDG----DAEKKEEEL----------TKKQIFLQYVLLNKVLWYISLGYVFVYV  230 (379)
T ss_pred             ccCccccCc--------------cccccc----ccccccccc----------cchHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            111100000              000000    000000000          0001234567788999888887777777


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH--hh
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LS  377 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  377 (503)
                      ....+..+.|.|+++..+.++... .......++.+++.++.+++.||..+++..  ...................  ..
T Consensus       231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  308 (379)
T TIGR00881       231 VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--PLAVFFMALIIVSLLVYWLNPAA  308 (379)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHHHhcCcch
Confidence            788888899999988888876544 445667788899999999999986443211  1111111111111111111  12


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK  448 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~  448 (503)
                      +.+......++.+.+.....+.......+..|++.|+++.|+.+...++ |..++|.+.|.+.|..| |+.
T Consensus       309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~  377 (379)
T TIGR00881       309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADGFG-WAG  377 (379)
T ss_pred             hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHhhc-ccc
Confidence            2233333334444443344444556778888999999999999988888 88889999999999876 543

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=100.00  E-value=1.5e-34  Score=284.91  Aligned_cols=417  Identities=14%  Similarity=0.069  Sum_probs=258.2

Q ss_pred             ccCCchhHHHHHHhhhcccCCCCCcccccccccc-----cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH
Q 010692           34 SHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGD-----FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV  108 (503)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~  108 (503)
                      ....+..+..+..+++....+...+.    +.++     .+.+..+.+++.+.+.+++.++++++|+++||+|||+++.+
T Consensus        16 ~~~~~~~~~~~~~g~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~   91 (502)
T TIGR00887        16 RAIVIAGVGFFTDSYDLFCISLVTKM----LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM   91 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            34444555666677765555555533    2332     34556678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhH------HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH
Q 010692          109 GLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG  182 (503)
Q Consensus       109 ~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~  182 (503)
                      +.++..++.++++++++      ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|.++++.++
T Consensus        92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~  171 (502)
T TIGR00887        92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA  171 (502)
T ss_pred             HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998865      789999999999999999999999999999999999999999999999999999888


Q ss_pred             HhhcC-----------------------cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcc
Q 010692          183 GVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE  239 (503)
Q Consensus       183 ~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  239 (503)
                      ..+..                       ..+||+.|.+.++++++..+. .+.+||+++....+++.++...+ ...+..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~-~~~~~~  249 (502)
T TIGR00887       172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAAS-DMSAVL  249 (502)
T ss_pred             HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHH-HHHHHh
Confidence            65431                       237999998888776654444 45669987753221111100000 000000


Q ss_pred             cCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh----hh---HHHHHHHHHHHHHHhhhhhccccch
Q 010692          240 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE----KV---YVVNVLGYIAYNFVIGAYSYWGPKA  312 (503)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~  312 (503)
                      ..+..++ .++.++..+++ ++.+             .++++++++    +.   .+.....++.....+++...|.|.+
T Consensus       250 ~~~~~~~-~~~~~~~~~~~-~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i  314 (502)
T TIGR00887       250 QVKIEAE-PDEVEKASTAV-EVPK-------------ASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVI  314 (502)
T ss_pred             ccccccC-cccccchhccc-cchh-------------hhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHH
Confidence            0000000 00000000000 0000             122333321    11   1212222333444556777788888


Q ss_pred             hhhhcccchhh-------------HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH-hh-
Q 010692          313 GYNIYHMSNAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LS-  377 (503)
Q Consensus       313 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-  377 (503)
                      +++ .|.+...             .....+..++.+++.++++++.||+|||     ++++.+..+..+...+... .. 
T Consensus       315 ~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~~~~~~~~l~~~~~~  388 (502)
T TIGR00887       315 LSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFILTVLFFVLGFAYNH  388 (502)
T ss_pred             HHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHHHHHHHHHHHHHHHh
Confidence            865 3443210             0122334456677889999999999998     5554444433333322221 11 


Q ss_pred             -hHHHHHHHHHHHHHHHh-hccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh---------hH
Q 010692          378 -SLYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---------NW  446 (503)
Q Consensus       378 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---------~~  446 (503)
                       +........++...+.+ ...+....+..|.+|++.|+++.|+.+...++ +++++|.+.|.+.+..+         ++
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~  467 (502)
T TIGR00887       389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAIIGQFGFLYLAQHGDPTKGYPTGIWM  467 (502)
T ss_pred             cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHHHHHHHhhhhhccccccccccccccc
Confidence             11111222222222222 23344555667888889999999999988888 88889999999988431         13


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccc
Q 010692          447 RKTTLALTSIFFLAAGIWFVGIFLK-SIDKFNEDGE  481 (503)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  481 (503)
                      ...+.+++++.+++.+..+   ++| +|+++.||++
T Consensus       468 ~~~~~i~~~~~~~~~i~~~---~lpEt~~~~leei~  500 (502)
T TIGR00887       468 GHVLEIFALFMFLGILFTL---LIPETKGKSLEELS  500 (502)
T ss_pred             hHHHHHHHHHHHHHHHHhe---EeccCCCCCHHhhh
Confidence            3466666666555544332   334 3555555443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=100.00  E-value=7e-34  Score=275.65  Aligned_cols=370  Identities=13%  Similarity=0.066  Sum_probs=253.7

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G  137 (503)
                      |.+++ +|+++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++.    ++++.+++.|++.|
T Consensus        51 p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g  129 (438)
T TIGR00712        51 PYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNG  129 (438)
T ss_pred             HHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence            44454 69999999999999999999999999999999999999999999999998887764    56788889999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      ++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.+... ...+||+.|++.++++++..++.+++.||.
T Consensus       130 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~  209 (438)
T TIGR00712       130 WFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT  209 (438)
T ss_pred             HHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999888888999999999999999999999999999999988776544 456999999999998888777777776664


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      ++....++.++..      .   +...     + ..   ++.+++.        ..++  ...+.+++++.+|...+..+
T Consensus       210 ~~~~~~~~~~~~~------~---~~~~-----~-~~---~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~  261 (438)
T TIGR00712       210 PQSCGLPPIEEYR------N---DYPD-----D-YN---EKAEQEL--------TAKE--IFMQYVLPNKLLWYIAIANV  261 (438)
T ss_pred             HHhcCCCCchhcc------c---cccc-----c-cc---ccccccc--------chHH--HHHHHHccCchHHHHHHHHH
Confidence            3221100000000      0   0000     0 00   0000000        0000  11234678899998877777


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH--HHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF--LGAISCLTA  373 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~  373 (503)
                      +.....+++..|.|.|+++..+.++... ....+..+.++++.+++|++.||+++++    +.......  ......+..
T Consensus       262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~~  337 (438)
T TIGR00712       262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN----RGATGVFFMTLVTIAVIVY  337 (438)
T ss_pred             HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc----ccHHHHHHHHHHHHHHHHH
Confidence            7777777888899999998878776544 4456677788999999999999996542    11111111  111111111


Q ss_pred             HHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          374 FCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       374 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      ...  .+.+......+..+.+.............+..|++.||++.|+.+...+..|.+++|.+.|.+.|..| |...++
T Consensus       338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~  416 (438)
T TIGR00712       338 WMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFM  416 (438)
T ss_pred             HhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHH
Confidence            111  12222222222222222111112223456788889999999999888777345679999999999877 777887


Q ss_pred             HHHHHHHHHHHHHH
Q 010692          452 ALTSIFFLAAGIWF  465 (503)
Q Consensus       452 ~~~~~~~~~~~~~~  465 (503)
                      +..++.+++.+..+
T Consensus       417 ~~~~~~~~~~~~~~  430 (438)
T TIGR00712       417 VMIGGSILAVILLI  430 (438)
T ss_pred             HHHHHHHHHHHHHH
Confidence            77666555555444

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=1.8e-33  Score=271.73  Aligned_cols=348  Identities=14%  Similarity=0.135  Sum_probs=256.7

Q ss_pred             cccccccCCCccc-----hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQ-----DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        62 ~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      |.+.+++|.+..+     .|++.+++.++..++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|++.
T Consensus        38 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (408)
T PRK09874         38 PLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALL  117 (408)
T ss_pred             HHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            6667889988665     48899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+ ..+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++..||.
T Consensus       118 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (408)
T PRK09874        118 GLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN  196 (408)
T ss_pred             HHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99865 56778889999999999999999999999999999999999999888999999999988777776666665542


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHH-HHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-LGY  295 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  295 (503)
                      .+..   ++++..                                         .    .++..+.+++++++... ...
T Consensus       197 ~~~~---~~~~~~-----------------------------------------~----~~~~~~~~~~~~~~~~~~~~~  228 (408)
T PRK09874        197 FQPV---SKKEML-----------------------------------------H----MREVVTSLKNPKLVLSLFVTT  228 (408)
T ss_pred             cccc---cchhhh-----------------------------------------H----HHHHHHhCcCCchHHHHHHHH
Confidence            2110   000000                                         0    01122334555554432 222


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchh-h---HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNA-D---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL  371 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~  371 (503)
                      ............+.|.|..+..+.... .   ..+..+..++.+++.+..|++.||+++|     +.+...........+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~  303 (408)
T PRK09874        229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLLI  303 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHH
Confidence            333334444556667777765443221 1   1233445667778888899999999988     555555444444444


Q ss_pred             HHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          372 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      .....++.+...+..++.+++.+...+.......+..+++.+|+..++.+...+. |..++|.+.|.+.+..| |+..|.
T Consensus       304 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~~~~f~  381 (408)
T PRK09874        304 PMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-FRAVFL  381 (408)
T ss_pred             HHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-hhHHHH
Confidence            3333445555555556667777777777777778888889999999999888777 89999999999999877 778888


Q ss_pred             HHHHHHHHHHHHHH
Q 010692          452 ALTSIFFLAAGIWF  465 (503)
Q Consensus       452 ~~~~~~~~~~~~~~  465 (503)
                      +.+++.+++.+...
T Consensus       382 ~~~~~~l~~~~~~~  395 (408)
T PRK09874        382 VTAGVVLFNAVYSW  395 (408)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88777666655444

>TIGR00898 2A0119 cation transport protein

Probab=100.00  E-value=3.6e-34  Score=283.78  Aligned_cols=377  Identities=14%  Similarity=0.114  Sum_probs=255.5

Q ss_pred             cccccccccCCC---ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           60 WFTPKRGDFKLN---NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        60 ~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      ..+.+.+|+|++   ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++++|++.++++|++.
T Consensus       111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~  190 (505)
T TIGR00898       111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV  190 (505)
T ss_pred             ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence            347779999998   88999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++..+.   +||+.|++.+++.++..+.. ++.||+
T Consensus       191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~-~~~~es  266 (505)
T TIGR00898       191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLS-WFVPES  266 (505)
T ss_pred             HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence            99999999999999999999999999999999999999999999987765   49999999998877766655 556776


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      ++....+++.++..+  ..++..+.+..+...+......+++..+++           ...++++++++|.++...+...
T Consensus       267 p~~l~~~~~~~~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~  333 (505)
T TIGR00898       267 PRWLISQGRIEEALK--ILQRIAKINGKKLPAEVLSLSLEKDLSSSK-----------KQYSFLDLFRTPNLRKTTLCLM  333 (505)
T ss_pred             hHHHHHCCCHHHHHH--HHHHHHHHcCCCCCHHHHhhhhhhhhhhcc-----------CCCcHHHHhCChHHHHHHHHHH
Confidence            543211111110000  000000000000000000000000000000           0124567888888777665544


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      ...+......+..+.+..+ .+.+.  .....+..+..+++.++.+++.||+|||     +.+....++..+..++....
T Consensus       334 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~~  405 (505)
T TIGR00898       334 MLWFTTAFSYYGLVLDLGN-LGGNI--YLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLFV  405 (505)
T ss_pred             HHHHHHHHHHHHHhccccc-cCCCh--HHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHc
Confidence            3333322222222222222 22231  2223345567788899999999999998     66655555555444444433


Q ss_pred             hhH--HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692          377 SSL--YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT  454 (503)
Q Consensus       377 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~  454 (503)
                      ++.  +......++.+++....++..+.+..|.+|++.|+++.|+.+....+ |++++|.+.+ +.+ .+ +..++.+.+
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~~  481 (505)
T TIGR00898       406 PVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLFG  481 (505)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHHH
Confidence            322  33444445555555666677788888999999999999999988887 8899998888 433 33 335666666


Q ss_pred             HHHHHHHHHHH
Q 010692          455 SIFFLAAGIWF  465 (503)
Q Consensus       455 ~~~~~~~~~~~  465 (503)
                      ++.+++.++.+
T Consensus       482 ~~~~~~~~~~~  492 (505)
T TIGR00898       482 GLALLAGILTL  492 (505)
T ss_pred             HHHHHHHHHHH
Confidence            65555544444

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=100.00  E-value=7e-35  Score=288.19  Aligned_cols=391  Identities=14%  Similarity=0.122  Sum_probs=250.3

Q ss_pred             cccccccccccCCC--------ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---hHH
Q 010692           58 PSWFTPKRGDFKLN--------NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDF  126 (503)
Q Consensus        58 ~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~  126 (503)
                      ...++.+..+++.+        ..+.+++.+++.++..++++++|+++||+|||++++++.++++++.+++.++   .++
T Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (481)
T TIGR00879        48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV  127 (481)
T ss_pred             hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence            33336667777766        7899999999999999999999999999999999999999999999998554   456


Q ss_pred             HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH---HhhcCcchhHHHHHHHHHHHH
Q 010692          127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILML  203 (503)
Q Consensus       127 ~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~---~~l~~~~gwr~~f~~~~~~~~  203 (503)
                      +.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++   ....+..+||+.|++.++..+
T Consensus       128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~  207 (481)
T TIGR00879       128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG  207 (481)
T ss_pred             HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999   777677899999999666554


Q ss_pred             HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692          204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL  283 (503)
Q Consensus       204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (503)
                      +.. +..++.||+++....+++.+...  +...+....+.   ......+.......+.....   +..+..+..+.+..
T Consensus       208 ~~~-~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  278 (481)
T TIGR00879       208 LLF-LGLFFLPESPRWLVGKGRVEEAR--KSLARLRGTSG---EDKELLDELELIDIKRSIEK---RSVQPSWGSLFSST  278 (481)
T ss_pred             HHH-HHHhcCCCChHHHHHcCChHHHH--HHHHHHhCCCC---CcHHHHHHHHHHHHHHHHHH---hhccccHHHHHhcC
Confidence            444 44455566432211111110000  00000000000   00000000000000000000   00000012222222


Q ss_pred             ---hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          284 ---QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       284 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                         +.+.++...+..+........+.++.|.+..+ .+.+.... .......++.+++.++.+++.||+++|     +.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~  352 (481)
T TIGR00879       279 RRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLL  352 (481)
T ss_pred             chhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHH
Confidence               23444444444444444455566677777655 46654333 455666778889999999999999988     555


Q ss_pred             HHHHHHHHHHHHHHHH----hhh------HHHHHHHHHHHHHHHhhcc-chhhHHhhcccCCCCchhHHHHHHHHHhhcc
Q 010692          360 SAATFLGAISCLTAFC----LSS------LYGFLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFG  428 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  428 (503)
                      ..+..+..+..+....    ..+      .+..+....+...+.+... +....+..+.+|++.|+++.|+.+...++ |
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g  431 (481)
T TIGR00879       353 LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-A  431 (481)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-H
Confidence            4444433333332221    111      2222333333333333333 34445557888889999999999988888 8


Q ss_pred             cccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          429 DVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       429 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .+++|.+.+++.+..+ +...|++.+++.+++.++.+
T Consensus       432 ~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~  467 (481)
T TIGR00879       432 NFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVY  467 (481)
T ss_pred             HHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHh
Confidence            8889999999998766 66777777666555555443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=100.00  E-value=1.6e-34  Score=284.81  Aligned_cols=411  Identities=14%  Similarity=0.074  Sum_probs=248.3

Q ss_pred             hhHHHHHHhhhcccCCCCCcccccccccc--------cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHH
Q 010692           39 PLAEAEMATRSLSEDSPPTPSWFTPKRGD--------FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGL  110 (503)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~  110 (503)
                      ..+..+...++.+..+...    +.++++        ++.++.+.+++.+++.++..++++++|+++||+|||++++++.
T Consensus        17 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~   92 (479)
T PRK10077         17 ATLGGLLFGYDTAVISGTV----ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA   92 (479)
T ss_pred             HHHHHHhcCcccceehHhH----HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            3445555666544444443    334444        4889999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhh------------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHH
Q 010692          111 SVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG  178 (503)
Q Consensus       111 ~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g  178 (503)
                      ++++++.++++++            ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.+++
T Consensus        93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~  172 (479)
T PRK10077         93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV  172 (479)
T ss_pred             HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence            9999998888763            3357788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccc
Q 010692          179 YVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED  250 (503)
Q Consensus       179 ~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (503)
                      +.+++.+.        +.+|||+.|++.+++.++..+. .++.||++++...+++.++.  +   ...++....++..+.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~--~---~~~~~~~~~~~~~~~  246 (479)
T PRK10077        173 YFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQA--E---GILRKIMGNTLATQA  246 (479)
T ss_pred             HHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHH--H---HHHHHHcCChhHHHH
Confidence            88876553        4569999999988877776544 45567754321100000000  0   000000000000000


Q ss_pred             cchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH---HHHHHHHHHHHhhhhhccccchhhhhcccchhh-HHH
Q 010692          251 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV---NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMF  326 (503)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  326 (503)
                      .++..+..+++.              ...+..+.......   .....+......+...++.|.+..+ .+.+... ...
T Consensus       247 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~  311 (479)
T PRK10077        247 LQEIKHSLDHGR--------------KTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQ  311 (479)
T ss_pred             HHHHHHHHHHhh--------------hhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHH
Confidence            000000000000              00001111000000   0111111122233445566776655 4555432 334


Q ss_pred             HHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh--hhH--HHHHHHHHHHHHHHhhcc-chhh
Q 010692          327 GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSL--YGFLALFTVGELLVFATQ-APVN  401 (503)
Q Consensus       327 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~  401 (503)
                      .....+..+++.+++++++||++||     ++++.+..+.++..+.....  .+.  .......++.+.+.+... +...
T Consensus       312 ~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (479)
T PRK10077        312 TIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCW  386 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhH
Confidence            4556677888999999999999998     66655555444443333221  111  122222333333333333 4556


Q ss_pred             HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692          402 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-ID  474 (503)
Q Consensus       402 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  474 (503)
                      .++.|.+|++.|+++.|+.+...++ |.++++.+.+.+.      |..+ +...+++.++..+++.++...  +.++ |+
T Consensus       387 ~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~e~~~  462 (479)
T PRK10077        387 VLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWK--FVPETKG  462 (479)
T ss_pred             HHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHh--ccccCCC
Confidence            7888888889999999999888777 7777766665444      4444 345566655554444333321  2343 55


Q ss_pred             ccccccccc
Q 010692          475 KFNEDGENQ  483 (503)
Q Consensus       475 ~~~~~~~~~  483 (503)
                      +..||.++.
T Consensus       463 ~~~~~~~~~  471 (479)
T PRK10077        463 KTLEEMEAL  471 (479)
T ss_pred             CCHHHHHHH
Confidence            544444433

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=5.4e-34  Score=275.30  Aligned_cols=344  Identities=10%  Similarity=0.002  Sum_probs=251.4

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLV  136 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~  136 (503)
                      |.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+.     .++++.+++.|+++
T Consensus        41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  120 (417)
T PRK10489         41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD  120 (417)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence            5556888889999999999999999999999999999999999999988888877665542     56789999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++..++..++. +..|+.
T Consensus       121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~  199 (417)
T PRK10489        121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPAL  199 (417)
T ss_pred             HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence            9999988888999999999999999999999999999999999999999888899999998887766555443 333442


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      +++    ++++.                                         +..++..+.++.++++|.++...+..+
T Consensus       200 ~~~----~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (417)
T PRK10489        200 PPP----PQPRE-----------------------------------------HPLRSLLAGFRFLLASPVVGGIALLGG  234 (417)
T ss_pred             CCC----Ccccc-----------------------------------------cchHHHHHHHHHHHcChHHHHHHHHHH
Confidence            111    00000                                         000011133456677777766555443


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC  375 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (503)
                      +.. .......+.|.|.++..+.++... .+.....++.+++.++.+++.||.+++     +.+..+..+.....+....
T Consensus       235 ~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~  308 (417)
T PRK10489        235 LLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGL  308 (417)
T ss_pred             HHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHc
Confidence            332 234566788999988777775443 444566788888999999999986554     4444444443333333333


Q ss_pred             hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHH
Q 010692          376 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS  455 (503)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~  455 (503)
                      .++.+...+..++.+++.+...+....++.+..|++.||+++|+.+...+. |..++|.+.|++.|..| +...+...++
T Consensus       309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g-~~~~~~~~~~  386 (417)
T PRK10489        309 MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMT-PVASASASGF  386 (417)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhc-hhhHHHHHHH
Confidence            444444455555566655555555667778888889999999999887777 99999999999999887 4455555554


Q ss_pred             HHHH
Q 010692          456 IFFL  459 (503)
Q Consensus       456 ~~~~  459 (503)
                      +.++
T Consensus       387 ~~~~  390 (417)
T PRK10489        387 GLLI  390 (417)
T ss_pred             HHHH
Confidence            4433

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=4.1e-33  Score=267.36  Aligned_cols=341  Identities=10%  Similarity=0.037  Sum_probs=244.6

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |++.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|++.+
T Consensus        40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~  119 (413)
T PRK15403         40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSIC  119 (413)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+++.|++|+++|++++++......+|..+||++++.+.++.|||+.|++.+++.++..+..++..||+.+.  
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~--  197 (413)
T PRK15403        120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR--  197 (413)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc--
Confidence            777777888999999999999999999999999999999999999888999999999988877766655556664221  


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                        ++++..                                          .+...++++.+++||.++...+..++....
T Consensus       198 --~~~~~~------------------------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~  233 (413)
T PRK15403        198 --GAVPFS------------------------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIP  233 (413)
T ss_pred             --cCCCCC------------------------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence              000000                                          001124567888999999988877777777


Q ss_pred             hhhhhccccchhhhhcccchhhHHH-HHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH--HHHHHHHHHHH--HHh
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA--TFLGAISCLTA--FCL  376 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~  376 (503)
                      ...+..+.|.++++.++.++....+ ......+.+++..+.+.+.++..+++    ......  ...+.......  ...
T Consensus       234 ~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~~~ig~~l~~~~~~~~~  309 (413)
T PRK15403        234 MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPIQLVGLALLIVGNLLWP  309 (413)
T ss_pred             HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHHHHHHHHHHHHHHHHcc
Confidence            7778888999999988888765533 33345566666666666554433321    111111  11111111111  111


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      ++.+..+...++.+.+.+...+........ -.+..+|++.++.+..... +...++...|++.+...  ..++....++
T Consensus       310 ~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~~~--~~~~~~~~~~  385 (413)
T PRK15403        310 HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFNGG--RLPFHLLAVV  385 (413)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC--chHHHHHHHH
Confidence            222223445555566666666655543321 1223479999998877777 56667888888877633  3445444444

>PRK15075 citrate-proton symporter; Provisional

Probab=100.00  E-value=7.9e-34  Score=274.95  Aligned_cols=353  Identities=12%  Similarity=0.066  Sum_probs=233.8

Q ss_pred             CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhH-HHHH-----HHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692           36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVL-SSAF-----MVGLLVASPIFASLAKSHNPFRLIGVG  109 (503)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~-~s~~-----~~~~~~~~~~~g~l~dr~Grr~~l~~~  109 (503)
                      ....++..+++.+|....+...    |.+.+|++.++.+.+.+ .+..     .++..+++++.|+++||+|||++++.+
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~   92 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYA----TAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT   92 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence            3444556666666544555444    66689999988876544 3332     223347899999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhHHHH--------HHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH
Q 010692          110 LSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY  181 (503)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l  181 (503)
                      .+++++++++++++++++.        ++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.+
T Consensus        93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~  172 (434)
T PRK15075         93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL  172 (434)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999874        68899999999999999899999999999999999999999988888888888


Q ss_pred             HHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692          182 GGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD  253 (503)
Q Consensus       182 ~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (503)
                      ++.+.        +.+|||++|++..+... .........||.         ++.... +                    
T Consensus       173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~-~~~~~~~~~~e~---------~~~~~~-~--------------------  221 (434)
T PRK15075        173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVP-FIFLIRRSLEET---------EEFLAR-K--------------------  221 (434)
T ss_pred             HHHHHHhCCHHHHhccchHHHHHHHHHHHH-HHHHHHHhcCCC---------HHHHHh-h--------------------
Confidence            77652        46799999997544321 111111111110         000000 0                    


Q ss_pred             hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH-HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhh
Q 010692          254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI  331 (503)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  331 (503)
                            ++.        ..+   +.++...+++..+.. .+..++.....+.+..|.|.|+++..|.+.... ....+..
T Consensus       222 ------~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~  284 (434)
T PRK15075        222 ------HRP--------SMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVG  284 (434)
T ss_pred             ------hcc--------ccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence                  000        000   112223344444433 222334455566778899999998778876544 4445667


Q ss_pred             hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH-HH-HHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692          332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-FCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHS  407 (503)
Q Consensus       332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (503)
                      ++.+++.++.|+++||++||     +.......+...... .. ...  .+.........+.+++.+...+.......|.
T Consensus       285 ~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~  359 (434)
T PRK15075        285 VSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEV  359 (434)
T ss_pred             HHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            78889999999999999988     544443332222111 11 111  1121222222333344444445556677899


Q ss_pred             cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692          408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN  445 (503)
Q Consensus       408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~  445 (503)
                      +|++.|+++.|+.+.....+++.++|.+.|++.|..|.
T Consensus       360 ~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~  397 (434)
T PRK15075        360 MPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD  397 (434)
T ss_pred             CCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence            99999999999976666654566799999999998873

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=1e-33  Score=277.99  Aligned_cols=362  Identities=12%  Similarity=0.101  Sum_probs=259.5

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++++++.++++|+++|++.+
T Consensus        34 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~  113 (471)
T PRK10504         34 PSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGA  113 (471)
T ss_pred             HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhH
Confidence            66789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|++......+..++.....|+..... 
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-  192 (471)
T PRK10504        114 MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQT-  192 (471)
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccC-
Confidence            9999999999999999999999999999999999999999999999999999999988777766666655555422110 


Q ss_pred             ccccccccccccc-------ccCcccCCCCCccccccc-----------hhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692          222 PAESGKAQVVASV-------SEGSEASNLNDHVSEDIS-----------DQASERSIKSIGESRFLNQLSQFSQDTKVLL  283 (503)
Q Consensus       222 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (503)
                        ++.+.......       ....+..+..........           ....++++..           +...+. +++
T Consensus       193 --~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~l~  258 (471)
T PRK10504        193 --RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN-----------RALFSL-KLF  258 (471)
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC-----------CCccCH-HHh
Confidence              00000000000       000000000000000000           0000000000           000122 478


Q ss_pred             hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH
Q 010692          284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA  362 (503)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~  362 (503)
                      +||.++......++..........+.|.|++...+.++... .......++.+++.++.+++.||+++|     +.+..+
T Consensus       259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~  333 (471)
T PRK10504        259 RTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVAT  333 (471)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHH
Confidence            89999888877777777776777788999887777776544 333445566677778899999999988     666555


Q ss_pred             HHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          363 TFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       363 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      ..+..+........   .+.+......++.+.+.+...++......+.+|++.++.+.|+.++.... |..+|+.+.|.+
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~l  412 (471)
T PRK10504        334 TLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTIAGLL  412 (471)
T ss_pred             HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHHHHHH
Confidence            54444333332222   22222233344455666666777788888889999999999999888888 989999999999


Q ss_pred             Hhhhh
Q 010692          440 QDHVN  444 (503)
Q Consensus       440 ~~~~g  444 (503)
                      .+..|
T Consensus       413 l~~~g  417 (471)
T PRK10504        413 LGLFG  417 (471)
T ss_pred             HHHhh
Confidence            88765

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=4.1e-33  Score=267.16  Aligned_cols=327  Identities=16%  Similarity=0.169  Sum_probs=249.5

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+
T Consensus        29 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  108 (385)
T TIGR00710        29 PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGAS  108 (385)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchh
Confidence            77789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..+..++..||.++.. 
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  187 (385)
T TIGR00710       109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE-  187 (385)
T ss_pred             HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc-
Confidence            9999999999999999999999999999999999999999999998889999999998887777776666655532110 


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                         +++..                                           +...+++++.+++|.++...+........
T Consensus       188 ---~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (385)
T TIGR00710       188 ---ARIQI-------------------------------------------STYFETFLLLLKSKMFWGYALIYGASFGG  221 (385)
T ss_pred             ---ccCCH-------------------------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence               00000                                           00013456677888888877766666666


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----  376 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  376 (503)
                      ......+.|.++++..+.++... .+.....++.+++.++.+++.||+++|     +.+.....+..+........    
T Consensus       222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  296 (385)
T TIGR00710       222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITAILG  296 (385)
T ss_pred             HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            77777888999888788876554 444566788899999999999999987     44433333322222222111    


Q ss_pred             -hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692          377 -SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                       ..........++.+.+.+...+.......+.. |+.++++.++.+......|.+.+| +.+.+.+.
T Consensus       297 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~~  361 (385)
T TIGR00710       297 LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF-PHVAGTASALFGTLRLVLGAIVGY-LVSLIHGN  361 (385)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-cccchHHHHHHHHHHHHHHHHHHH-HHHhcccc
Confidence             12223333344455555666666666666665 467999999998887775666555 55555443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=4.5e-33  Score=265.89  Aligned_cols=344  Identities=10%  Similarity=0.062  Sum_probs=248.6

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~  142 (503)
                      +++++|.|+.+.|++.+++.+...+.+++.|+++||+||||.++ .+..+.+++.+++++++|++.+++.|+++|.+.+.
T Consensus        24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~  103 (375)
T TIGR00899        24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAST  103 (375)
T ss_pred             HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhh
Confidence            47899999999999999999999999999999999999988755 45666677788889999999999999999988888


Q ss_pred             hhhchhhhhhccCCCCCchhH--HHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          143 FISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      ..|...+++.|+.|+++|++.  .+....+.++|.++||++++.+.+.+|||+.|++.+++.++..++.++..||.+++.
T Consensus       104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  183 (375)
T TIGR00899       104 ANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA  183 (375)
T ss_pred             hHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCc
Confidence            888888899999887777654  588888899999999999999998899999999999887777777666666632210


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                      .  ++++ .                                               .+.++.++++.++......++...
T Consensus       184 ~--~~~~-~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~  213 (375)
T TIGR00899       184 P--GALT-R-----------------------------------------------LEVRGLLASRDTRLLFVACTLMWG  213 (375)
T ss_pred             c--cccC-c-----------------------------------------------chhhhhhcCcchHHHHHHHHHHHH
Confidence            0  0000 0                                               011223455555554444444444


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      .......+.|.++++..+.++... ..........+++.++.+++.||+++|     +.+....+............++.
T Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~  288 (375)
T TIGR00899       214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNSL  288 (375)
T ss_pred             HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHHH
Confidence            444556677888888778776544 333344455677788999999999988     55544444433333333333444


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL  459 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  459 (503)
                      +.......+.+++.+...+.......+..| ++++++.++.+...+. |..++|.+.|.+.|..| ++..+.+.+++.++
T Consensus       289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~  365 (375)
T TIGR00899       289 WALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYWFAIVMLIV  365 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHHHHHHHHHH
Confidence            544444555555555555555566666554 5577999999888887 88999999999999876 77778777766665


Q ss_pred             HHHHHH
Q 010692          460 AAGIWF  465 (503)
Q Consensus       460 ~~~~~~  465 (503)
                      +.++..
T Consensus       366 ~~~~~~  371 (375)
T TIGR00899       366 ALFCLL  371 (375)
T ss_pred             HHHHHh
Confidence            555443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK03893 putative sialic acid transporter; Provisional

Probab=100.00  E-value=1.2e-33  Score=279.77  Aligned_cols=370  Identities=13%  Similarity=0.123  Sum_probs=241.4

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      .+|.+.+++|+++.+.+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++.++++|++.+++.|++.|++
T Consensus        42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~  121 (496)
T PRK03893         42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG  121 (496)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            33777899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      .+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.++||+.|++..+..+ ..+......||..+.
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~~~~  200 (496)
T PRK03893        122 MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPEAEDW  200 (496)
T ss_pred             HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCCchhh
Confidence            9999999999999999999999999999999999999999999999999999999987544332 222222222432111


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh-------hhhhchH-H--------------
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL-------NQLSQFS-Q--------------  277 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~--------------  277 (503)
                      ..++++...                   .++..+.....+++........       ....... .              
T Consensus       201 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (496)
T PRK03893        201 KEKHAGKAP-------------------VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAI  261 (496)
T ss_pred             hhhcccccc-------------------chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence            000000000                   0000000000000000000000       0000000 0              


Q ss_pred             --HH-HH--HhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccccc
Q 010692          278 --DT-KV--LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT  351 (503)
Q Consensus       278 --~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~  351 (503)
                        .. .+  ..+.+.........+...........++|.|+++..+.+.... .+.....++.+++.++.|++.||+++|
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~  341 (496)
T PRK03893        262 FISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR  341 (496)
T ss_pred             HHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence              00 00  0001111111111111111222345688999987778876544 555677788899999999999999988


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692          352 ISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD  429 (503)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  429 (503)
                           +.+..+..+..+..+......  +.+......++.+.......+....++.+.+|++.|++++|+.+...++ |.
T Consensus       342 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~  415 (496)
T PRK03893        342 -----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-GG  415 (496)
T ss_pred             -----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-HH
Confidence                 555544443333332222221  2222222222222233333455667778888889999999999888877 88


Q ss_pred             ccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          430 VPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      .++|.+.|.+.|..| +...+...+..
T Consensus       416 ~lgp~l~g~l~~~~g-~~~~~~~~~~~  441 (496)
T PRK03893        416 ALAPILGALIAQRLD-LGTALASLSFS  441 (496)
T ss_pred             HHHHHHHHHHhccCC-hHHHHHHHHHH
Confidence            889999999999887 65555544443

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=1.7e-32  Score=263.15  Aligned_cols=350  Identities=13%  Similarity=0.150  Sum_probs=250.6

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---h-hhHHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G  137 (503)
                      +++.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.+++.   + .++++.+++.|+++|
T Consensus        37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G  116 (402)
T TIGR00897        37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG  116 (402)
T ss_pred             HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence            555688999999999999999999999999999999999999999999999998877653   3 357889999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHH-HHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      ++.+...+...+.+.+++|+++|++++|+.+.+.++|. +++|++++.+.+.+||+..++......++..++..++.++.
T Consensus       117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (402)
T TIGR00897       117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDI  196 (402)
T ss_pred             cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            99988888888889999999999999999999999997 68999999998888977666655444333333333433331


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      ++    +++.+..                   +                     +.++..+.++.++++|.++...+..+
T Consensus       197 ~~----~~~~~~~-------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (402)
T TIGR00897       197 FT----PQHMQTR-------------------E---------------------KFSELGKAATILFTNPNVLLGGMVRI  232 (402)
T ss_pred             CC----cccccCC-------------------c---------------------chhhHHHHHHHHHcChhHHHHHHHHH
Confidence            10    0000000                   0                     00001134557788999988877777


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHH-HHHHHHHHH-HHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAIS-CLTA  373 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~-~~~~  373 (503)
                      +.....+++.++.|.|+++ .+.+.... .+.....++..++.+..|+++||+++|+     ... ...+...+. ..+.
T Consensus       233 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~  306 (402)
T TIGR00897       233 INTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALY  306 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHH
Confidence            7777778888899988866 67776544 4445667889999999999999999873     322 111111111 1111


Q ss_pred             HH----hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692          374 FC----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT  449 (503)
Q Consensus       374 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~  449 (503)
                      ..    .++.+......++.+.+.+.. .+...... +.+|++|+++.|+.+...++ |..++|.+.|.+.|..| +...
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~-~~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~~  382 (402)
T TIGR00897       307 YIPQHFGHSFAVALIIAIALGIFLAGY-VPLAAVFP-TLAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIGV  382 (402)
T ss_pred             HHHHccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHH-hhCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHHH
Confidence            11    123344444455555555443 33444444 45677899999999988888 88889999999999887 5677


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010692          450 TLALTSIFFLAAGIWF  465 (503)
Q Consensus       450 ~~~~~~~~~~~~~~~~  465 (503)
                      +++.+++.+++.++..
T Consensus       383 ~~~~a~~~~i~~~~~~  398 (402)
T TIGR00897       383 VWIFAALYVVSAFLTA  398 (402)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7777766666555544

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.3e-34  Score=270.49  Aligned_cols=368  Identities=15%  Similarity=0.166  Sum_probs=281.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~  142 (503)
                      ..++++|..|.+++.+.+..|+.+++++.|++.||||.|+++..+.++.++++++...+.  +++.+++.|++||++.|.
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            457999999999999999999999999999999999999999999999999999998875  456789999999999999


Q ss_pred             hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      .+|+...+.+.|.|++||++..++...+..+|.+++.+++|++.+. +||+++|++.++++++..++++++..+++.+  
T Consensus       145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~--  222 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK--  222 (466)
T ss_pred             HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence            9999999999999999999999999999999999999999999988 9999999999999999998888877543322  


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                          ++....+|              .+.+++.+.+++.+++           ...+++++++++.+|...+..++..+.
T Consensus       223 ----h~~is~~E--------------l~~I~~~k~~~~~~~~-----------~~vP~~~i~ts~~vwai~~~~f~~~~~  273 (466)
T KOG2532|consen  223 ----HPNISEKE--------------LKYIEKGKSEAHVKKK-----------PPVPYKAILTSPPVWAIWISAFGGNWG  273 (466)
T ss_pred             ----CCCCCHHH--------------HHHHHhcccccccCCC-----------CCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence                22111111              1111111111111110           115688999999999999999999999


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccccc---chhhHHHHHHH-HHHHHHHHHHHHHh
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKLLSAA-TFLGAISCLTAFCL  376 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~  376 (503)
                      .+.+..|+|.|+++.++++..+. .+++++.+...+..+++|.++||+.+|   ....++++-.. ....++.++.+...
T Consensus       274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~  353 (466)
T KOG2532|consen  274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT  353 (466)
T ss_pred             HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence            99999999999999999996554 677899999999999999999998774   11223444332 23333333333333


Q ss_pred             h--hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh--hhhhHHHHHHH
Q 010692          377 S--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD--HVNNWRKTTLA  452 (503)
Q Consensus       377 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~--~~g~~~~~~~~  452 (503)
                      +  +.+..+.++.+.....+...+. .........|++.+..+|+.+....+ .++++|.+.|.+..  ....|+..|++
T Consensus       354 ~~~~~~~a~~~l~~~~~~~g~~~~G-f~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i  431 (466)
T KOG2532|consen  354 SDEHRLLAVILLTIAIGLSGFNISG-FYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLI  431 (466)
T ss_pred             CCCcchHHHHHHHHHHHHcccchhh-hHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence            3  2223344444333333333333 32333333678999999999998888 77889999999983  23468899999


Q ss_pred             HHHHHHHHHHHHH
Q 010692          453 LTSIFFLAAGIWF  465 (503)
Q Consensus       453 ~~~~~~~~~~~~~  465 (503)
                      .+++.+++.+++.
T Consensus       432 ~a~i~~~~~i~f~  444 (466)
T KOG2532|consen  432 AAGILIVGNIIFL  444 (466)
T ss_pred             HHHHHHHhchhee
Confidence            8888777775544

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=100.00  E-value=6.3e-33  Score=265.07  Aligned_cols=340  Identities=14%  Similarity=0.086  Sum_probs=246.1

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      +++++|++..++|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+..
T Consensus        37 ~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~  116 (400)
T PRK11646         37 FVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLF  116 (400)
T ss_pred             HHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA  223 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~  223 (503)
                      .+...+++.|++|+++|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++..+..||...     
T Consensus       117 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-----  190 (400)
T PRK11646        117 DPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-----  190 (400)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-----
Confidence            8999999999999999999999999999999999999999998 6799999999988777666555555444110     


Q ss_pred             cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692          224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG  303 (503)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (503)
                       +++..                                            +..+++++++++|.++...+..+.......
T Consensus       191 -~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (400)
T PRK11646        191 -STVRT--------------------------------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAV  225 (400)
T ss_pred             -cccch--------------------------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence             00000                                            001335567788887765554444443334


Q ss_pred             hhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhh-cccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692          304 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILD-QMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF  382 (503)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (503)
                      ....+.|.|+++.++.+.....+.....+....+....+++.| |++.+     +.+..+..+..+..+.....++.+..
T Consensus       226 ~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~  300 (400)
T PRK11646        226 QVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQL  300 (400)
T ss_pred             HHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence            4556789998887664432223333444444433444455554 44433     33333333333333333334444444


Q ss_pred             HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh---HHHHHHHHHHHHHH
Q 010692          383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN---WRKTTLALTSIFFL  459 (503)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~  459 (503)
                      ....++.+.+.+...+....+..+..|+++||++.|+.+...+. |..+||.+.|++.|..++   ....+...+.+.++
T Consensus       301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~  379 (400)
T PRK11646        301 FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLI  379 (400)
T ss_pred             HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence            44445555555666677788888999999999999999888877 999999999999998643   23344444444333


Q ss_pred             H
Q 010692          460 A  460 (503)
Q Consensus       460 ~  460 (503)
                      +
T Consensus       380 ~  380 (400)
T PRK11646        380 T  380 (400)
T ss_pred             H
Confidence            3

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-33  Score=268.74  Aligned_cols=324  Identities=19%  Similarity=0.203  Sum_probs=237.6

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      ..+.+|.+....+.+.+.++|.++++++.+++|.+.||++..+.+....+++++..++....+|++.+++.|++.|+..+
T Consensus        70 ~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es  149 (495)
T KOG2533|consen   70 SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFES  149 (495)
T ss_pred             cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence            55679999999999999999999999999999999999999999999999999999898889999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh------cCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      ..+|....+++.|+.+++|+..++++.+..++|.++|.+++..+      ....||||.|++.++++++..+++++++|+
T Consensus       150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~  229 (495)
T KOG2533|consen  150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD  229 (495)
T ss_pred             ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence            99999999999999999999999999999999999999999886      345699999999999999999999999988


Q ss_pred             ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692          216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY  295 (503)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (503)
                      .+.+.      +...++|+              +...++.++.+.....     ++  ..+..+++.+++|.+|...+..
T Consensus       230 ~P~~~------~fl~~~ek--------------~~~~~~~~~~~~~~~~-----~~--~~~~~~~~a~~dp~vw~~~l~~  282 (495)
T KOG2533|consen  230 NPSKA------WFLTDEEK--------------ELVVERLRESPSGGIE-----NK--FKWKGFKEALKDPGVWPFSLCY  282 (495)
T ss_pred             Chhhc------cccchHHH--------------HHHHHHHHhccCCCcc-----cc--cCHHHHHHHHhchhHHHHHHHH
Confidence            55422      11100000              0000000000000000     00  1126788999999999999999


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH-HHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL-GAISCLTA  373 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~  373 (503)
                      ++.....+++.+|+|.|+.+..+.+.... .+.....++++++.+++|+++||+..-... +........+ ........
T Consensus       283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~-~~~~~~~~~~~~~~g~~~l  361 (495)
T KOG2533|consen  283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFAR-RLLFIVFLCLYAIIGAISL  361 (495)
T ss_pred             HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999556765444 667788899999999999999996411000 0233222222 22222322


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc
Q 010692          374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR  413 (503)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (503)
                      ........................+.......+...++.+
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k  401 (495)
T KOG2533|consen  362 LAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK  401 (495)
T ss_pred             HhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHH
Confidence            2222223222223333333444455555566666655433

>PRK10133 L-fucose transporter; Provisional

Probab=100.00  E-value=7.8e-33  Score=266.54  Aligned_cols=344  Identities=17%  Similarity=0.196  Sum_probs=251.1

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhhhHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRM  134 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~  134 (503)
                      ..++|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++   +++++++.++++|+
T Consensus        46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~  125 (438)
T PRK10133         46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF  125 (438)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence            334588899999999999999999999999999999999999999999999999999999886   46889999999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-c-------------------------
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-H-------------------------  188 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~-------------------------  188 (503)
                      ++|+|.+...+..++++.|+.++++|.+.+++.+..+.+|..+|+.+++.+.. .                         
T Consensus       126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~  205 (438)
T PRK10133        126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLV  205 (438)
T ss_pred             HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHH
Confidence            99999999999999999998877777778999999999999999999875430 0                         


Q ss_pred             chhHHHHHHHHHHHHHHHHHH-HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh
Q 010692          189 LNWRYAFWGEAILMLPFAVLA-FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR  267 (503)
Q Consensus       189 ~gwr~~f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (503)
                      .+||++|+....+..+..++. ....||.+.     ++++..                                      
T Consensus       206 ~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~--------------------------------------  242 (438)
T PRK10133        206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA--------------------------------------  242 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc--------------------------------------
Confidence            256667764443333222222 222233110     000000                                      


Q ss_pred             hhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchh-hhhcccchhhH-HHHHhhhhhhhhchhhhhhhh
Q 010692          268 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG-YNIYHMSNADM-MFGGVTIVCGIVGTISGGFIL  345 (503)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~  345 (503)
                         +..+..++.++++++|.++...+..+++.....+...|.+.|+ ++..+.++... .......++.++|+++++++.
T Consensus       243 ---~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~  319 (438)
T PRK10133        243 ---KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLI  319 (438)
T ss_pred             ---cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               0000113355778889888777766777777777777888775 56678887655 445677788899999999999


Q ss_pred             hcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692          346 DQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH  425 (503)
Q Consensus       346 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  425 (503)
                      ||+++|     +.+..+..+....++.....++. ..+..+.+.+++.+..+|..++...+..++ +.+++.++.. ...
T Consensus       320 ~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~  391 (438)
T PRK10133        320 SRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTI  391 (438)
T ss_pred             HHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHh
Confidence            999988     56555555544444333333332 234556678888889999999998888755 4677888775 344


Q ss_pred             hcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          426 IFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       426 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      . |+.++|.+.|.+.|..|+.+..|++...+
T Consensus       392 ~-g~~~~~~i~G~l~~~~g~~~~~~~v~~~~  421 (438)
T PRK10133        392 I-GGGIVTPVMGFVSDAAGNIPTAELIPALC  421 (438)
T ss_pred             c-cchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence            4 77788999999999876445566544443

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=1.2e-32  Score=263.84  Aligned_cols=337  Identities=14%  Similarity=0.078  Sum_probs=238.2

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh--------hhhHHHHHHHHHHH
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--------SSFDFWSIAICRML  135 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--------~~~~~~~l~~~r~l  135 (503)
                      +++|+|.|..++|++.+++.+++.++++++|+++||+|||++++.+.+...++.+...        ..++++.++++|++
T Consensus        42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l  121 (392)
T PRK12382         42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLI  121 (392)
T ss_pred             HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999888777654332        23688999999999


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +|++.+...+...+++.|++|+|+|++++++.+.+..+|..+||++++.+.+.+|||+.+.+..+..++.... ....||
T Consensus       122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~  200 (392)
T PRK12382        122 LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVRK  200 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhccC
Confidence            9999999889899999999999999999999999999999999999999988889998877665443222211 111111


Q ss_pred             ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692          216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY  295 (503)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (503)
                      .     +++++++                                         ++.+   +..+.+++ +.+     ..
T Consensus       201 ~-----~~~~~~~-----------------------------------------~~~~---~~~~~~~~-~~~-----~~  225 (392)
T PRK12382        201 V-----PAHAGER-----------------------------------------PSLW---SVVGLIWK-PGL-----GL  225 (392)
T ss_pred             C-----CCCcccC-----------------------------------------chHH---HHHHHHHH-hHH-----HH
Confidence            0     0000000                                         0000   11111111 111     11


Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC  375 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (503)
                      ++..........+.|.|+++. +.+.... ......++.+++.++.|++.||+++|     +.+..+..+..+.......
T Consensus       226 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~  298 (392)
T PRK12382        226 ALQGVGFAVIGTFVSLYFASK-GWAMAGF-TLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLLLLWL  298 (392)
T ss_pred             HHHHHHHhHHHHHHHHHHHhc-CCchhHH-HHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHHHHHH
Confidence            222233444556667777653 4443222 23345566788899999999999987     4444444444444333333


Q ss_pred             hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHH
Q 010692          376 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS  455 (503)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~  455 (503)
                      .++.+......++.+.+.+...+.......+..|+++||++.|+.+...++ |..++|.+.|++.|..| |+..+.+.+.
T Consensus       299 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~  376 (392)
T PRK12382        299 APTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVFLAGAI  376 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHHHHHHH
Confidence            445555555556666666666667777788889999999999999988887 88889999999999877 8888888777


Q ss_pred             HHHHHHHHHH
Q 010692          456 IFFLAAGIWF  465 (503)
Q Consensus       456 ~~~~~~~~~~  465 (503)
                      +.+++.++..
T Consensus       377 ~~~~~~~~~~  386 (392)
T PRK12382        377 SAVLGIIVTI  386 (392)
T ss_pred             HHHHHHHHHH
Confidence            6666655443

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=100.00  E-value=1.2e-33  Score=267.60  Aligned_cols=326  Identities=20%  Similarity=0.296  Sum_probs=247.0

Q ss_pred             ccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692           63 PKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        63 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~  142 (503)
                      .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+++|++.++++|++.|++.+.
T Consensus        22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~  101 (352)
T PF07690_consen   22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF  101 (352)
T ss_dssp             HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence            56899999999999999999999999999999999999999999999999999977777778888999999999999999


Q ss_pred             hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Q 010692          143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP  222 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~  222 (503)
                      ..+...+++.|++|+++|++++++.+...++|.+++|.+++.+.+.++||+.|++.+++.++..++..++.++.++..++
T Consensus       102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~  181 (352)
T PF07690_consen  102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRER  181 (352)
T ss_dssp             HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred             ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999888877555555442222111


Q ss_pred             ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692          223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI  302 (503)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (503)
                      +++.+..                           .+++            ++..+.++.++++|.+|...+..++.....
T Consensus       182 ~~~~~~~---------------------------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (352)
T PF07690_consen  182 ESPKESE---------------------------SKKP------------KPLKPGFKSLFKNPVLWILLIAFFLFFFVF  222 (352)
T ss_dssp             -SSTTTT-----------------------------HH------------HCCCH-CTHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             ccccccc---------------------------cccc------------cccccccccccccchhhhhhhhhhHHHHHH
Confidence            1111000                           0000            000012456667777775555555566677


Q ss_pred             hhhhccccchhhhhcccc-hhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH---Hhh
Q 010692          303 GAYSYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLS  377 (503)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  377 (503)
                      .....+.|.|+.+.++.+ .... .+..+..+..+++.++.+++.||++++     +.................   ..+
T Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  297 (352)
T PF07690_consen  223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLLPFSS  297 (352)
T ss_dssp             HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCSHHHC
T ss_pred             HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence            778899999988888888 4444 445677778888899999999999886     333222222222222222   222


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      +....+....+.+++.+...+.......+..|++++|++.|+.+...++ |..++|
T Consensus       298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP  352 (352)
T PF07690_consen  298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP  352 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence            3444555666677777788889999999999999999999999988887 766665

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=100.00  E-value=5.1e-32  Score=259.59  Aligned_cols=324  Identities=15%  Similarity=0.089  Sum_probs=234.0

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      +|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.
T Consensus        26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~  105 (392)
T PRK10473         26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGA  105 (392)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence            37778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.++..||+.+..
T Consensus       106 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  185 (392)
T PRK10473        106 GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR  185 (392)
T ss_pred             hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence            99899999999999999999999999999999999999999999888889999999999888877777666666532110


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                          +++..                                            ...+..++.++++.++...+...+...
T Consensus       186 ----~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (392)
T PRK10473        186 ----APAAS--------------------------------------------SKPRENSESLLNRFFLSRLVITTLSVT  217 (392)
T ss_pred             ----cCCcc--------------------------------------------chHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence                00000                                            000223345667776655554444444


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      ....+..+.|.++++..|.++... .+.....++.+++.++.+++.||+++|     +....+..+.....+........
T Consensus       218 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~  292 (392)
T PRK10473        218 VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPSH  292 (392)
T ss_pred             HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence            444556677888887778876544 344566778889999999999999987     55555544444433333333333


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc-hhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +.......+...+.+...+..  ...+..|.++| +.+.++    ... +..+++.+.+++.+..|
T Consensus       293 ~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~----~~~-~~~~g~~~~~~l~~~~g  351 (392)
T PRK10473        293 AVSLFGITLICAGFSVGFGVA--MSQALGPFSLRAGVASST----LGI-AQVCGSSLWIWLAAVLG  351 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccccHHHHH----HHH-HHHHHHHHHHHHHHHhc
Confidence            333333333333333333322  22333344333 334333    333 55667888888888776

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=100.00  E-value=2.1e-33  Score=277.56  Aligned_cols=380  Identities=14%  Similarity=0.145  Sum_probs=275.4

Q ss_pred             hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692           40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG  119 (503)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~  119 (503)
                      +...++..++....+...    |.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~----p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~   83 (485)
T TIGR00711         8 MLGTFMAVLDSTIVNVAI----PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL   83 (485)
T ss_pred             HHHHHHHHHHHHHHHHHH----HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence            334444444333433333    7778999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHH
Q 010692          120 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA  199 (503)
Q Consensus       120 ~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~  199 (503)
                      +++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.++++||+.|++.+
T Consensus        84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~  163 (485)
T TIGR00711        84 CGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV  163 (485)
T ss_pred             HhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHhccccccCCCCccccccccccc-------ccccCcccCCCCCcccc-ccchh-----------hhhhhh
Q 010692          200 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSEGSEASNLNDHVSE-DISDQ-----------ASERSI  260 (503)
Q Consensus       200 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~  260 (503)
                      +++++..++.++..|+..+..  .++.+.....       .........+..++..+ .+...           ...+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (485)
T TIGR00711       164 PIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELT  241 (485)
T ss_pred             HHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc
Confidence            888777776666666532211  0000000000       00000000000000000 00000           000000


Q ss_pred             cccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchh
Q 010692          261 KSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTI  339 (503)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  339 (503)
                      ++           +... ..+++++|.++...+..++.....+...++.|.|+++..+.++... .......++.+++.+
T Consensus       242 ~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~  309 (485)
T TIGR00711       242 DD-----------NPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSP  309 (485)
T ss_pred             CC-----------CCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            00           0001 1256788888888887777778888888899999999888887555 444566788899999


Q ss_pred             hhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH-Hh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692          340 SGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL  415 (503)
Q Consensus       340 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (503)
                      +.|++.||+++|     +.+..+..+......... ..   .+.+.......+.+++.+...++......+.+|++++++
T Consensus       310 ~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~  384 (485)
T TIGR00711       310 IAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIAR  384 (485)
T ss_pred             HHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhH
Confidence            999999999987     555555444444433333 11   223344445566667776667777777888899999999


Q ss_pred             HHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692          416 SMAISTVSIHIFGDVPSSPLVGVLQDHV  443 (503)
Q Consensus       416 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~  443 (503)
                      +.|+.+...+. |+.+|+.+.|.+.+..
T Consensus       385 ~~~~~~~~~~~-g~~ig~~i~g~~~~~~  411 (485)
T TIGR00711       385 GSSLSNFTRQL-GGSIGTALITTILTNR  411 (485)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            99999988887 8888999999988753

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=100.00  E-value=3.3e-32  Score=259.49  Aligned_cols=334  Identities=18%  Similarity=0.193  Sum_probs=238.2

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|+++|++.+
T Consensus        30 p~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~  109 (381)
T PRK03633         30 PLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCA  109 (381)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            77789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+.+.+..++++|++++++++.+.++|..+|+.+++.+.+...|+..+. .+........+.+...++.  .  
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~--  184 (381)
T PRK03633        110 MIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ--Q--  184 (381)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC--C--
Confidence            8888888888899999999999999999999999999999999876543333332 2222211111111111110  0  


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                       ++ +++.                                               .+.++.+++|.++......+.....
T Consensus       185 -~~-~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  215 (381)
T PRK03633        185 -AE-NHDS-----------------------------------------------TSIWPMLKLRQARLGVNGCIISGIV  215 (381)
T ss_pred             -CC-CCCC-----------------------------------------------CCHHHHHHhcchHHHHHHHHHHHHH
Confidence             00 0000                                               1123456677766554434444444


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY  380 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (503)
                      ......++|.|+++ .+.++... .+.....++.+++.+..+++.||+++|     +.+..+.....+......  .. .
T Consensus       216 ~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~-~  286 (381)
T PRK03633        216 LGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQVFVVILGSIAML--SQ-A  286 (381)
T ss_pred             HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hh-H
Confidence            55566778988877 46665433 444566778889999999999999988     555444444333332222  11 1


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHH
Q 010692          381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA  460 (503)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~  460 (503)
                      .......+.+.+.....+.......+..|+++++.+.+..+...++ |..++|.+.|++.|..| +...|.+.+.+.++.
T Consensus       287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~  364 (381)
T PRK03633        287 AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIY  364 (381)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHH
Confidence            1222333344444455677777778888887778788887766666 89999999999999887 666777666655444

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=100.00  E-value=5.7e-32  Score=258.25  Aligned_cols=340  Identities=16%  Similarity=0.156  Sum_probs=256.8

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHH
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRML  135 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l  135 (503)
                      +.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++..   .++++.+++.|++
T Consensus        24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l  103 (410)
T TIGR00885        24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI  103 (410)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence            3337789999999999999999999999999999999999999999999999999999988654   3689999999999


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc--------------------------c
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------------------------L  189 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------------------------~  189 (503)
                      .|+|.|...+....++.+..|+++|++.+++.+...++|..+||.+++.+...                          .
T Consensus       104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (410)
T TIGR00885       104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA  183 (410)
T ss_pred             HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998877421                          3


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhc-cccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhh
Q 010692          190 NWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF  268 (503)
Q Consensus       190 gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (503)
                      +||++|++.+++.++..++..+. .|+..+    +++++.                                        
T Consensus       184 ~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~----~~~~~~----------------------------------------  219 (410)
T TIGR00885       184 SVQTPYMIIGAVVLAVALLIMLTKMPALNH----SDAKQI----------------------------------------  219 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----cccccc----------------------------------------
Confidence            69999999988776665544322 122100    000000                                        


Q ss_pred             hhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhc-ccchh-hHHHHHhhhhhhhhchhhhhhhhh
Q 010692          269 LNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY-HMSNA-DMMFGGVTIVCGIVGTISGGFILD  346 (503)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d  346 (503)
                           +...+.++++|+|+++...+..+++.....+...+++.|.++.. +.+.. ...+......+..+|+++++++.|
T Consensus       220 -----~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~  294 (410)
T TIGR00885       220 -----SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLIS  294 (410)
T ss_pred             -----cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 00022446678888888888778887777777888888887643 22222 123344455778899999999999


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          347 QMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      |+++|     +.+......+.+..++....++.. ....+.+.+++.+..+|..+....+..+++.+..+.++...   .
T Consensus       295 r~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~---~  365 (410)
T TIGR00885       295 YLAAH-----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA---I  365 (410)
T ss_pred             HcCHH-----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH---H
Confidence            99887     666666666666655555544433 35566667788888889999999999987665545555432   2


Q ss_pred             cccccchhhHHHHHhhh-----hhHHHHHHHHHHH
Q 010692          427 FGDVPSSPLVGVLQDHV-----NNWRKTTLALTSI  456 (503)
Q Consensus       427 ~g~~~~~~~~g~l~~~~-----g~~~~~~~~~~~~  456 (503)
                      +|+.+.|++.|++.|..     |+++.+|++...+
T Consensus       366 ~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~  400 (410)
T TIGR00885       366 IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC  400 (410)
T ss_pred             hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence            48888999999999954     3466666654444

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=100.00  E-value=7.8e-32  Score=256.92  Aligned_cols=354  Identities=14%  Similarity=0.088  Sum_probs=250.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      +.+.+|++.++.+.+++.+++.+++.+.++++|+++||+|||++++++.++.+++.++++++++.   ++.|+++|++.+
T Consensus        27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a  103 (393)
T PRK11195         27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA  103 (393)
T ss_pred             HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            34468899999999999999999999999999999999999999999999999999888887764   778999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...|...+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+...++. .+..+..||.+.+.+
T Consensus       104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~  181 (393)
T PRK11195        104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRP  181 (393)
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCccccc
Confidence            99999999999999999999999999999999999999999999875 4888887776554433 333444555321100


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                         +.+..                   .    .               ...++..+..+.++++|.+........+....
T Consensus       182 ---~~~~~-------------------~----~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  220 (393)
T PRK11195        182 ---GQSWN-------------------P----I---------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGA  220 (393)
T ss_pred             ---ccCCC-------------------H----H---------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence               00000                   0    0               00011123345667777766555444444444


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY  380 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (503)
                      .....+..|.++++.++.++... .+.....++.+++.++.+++.||.+++     +.+..+...+.. .+.....++.+
T Consensus       221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~~  294 (393)
T PRK11195        221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMGLV-VLLMALQHSLL  294 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHHHH-HHHHHHHhHHH
Confidence            44555666777777788876555 444666778888889989988887766     444444333222 22222234444


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHhhcccCCCC-chhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL  459 (503)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  459 (503)
                      ......++.+++.+...++......+..|++. +|++.++.+...+. +..++..+.+.+ +..| .+..+.+.+...+.
T Consensus       295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~  371 (393)
T PRK11195        295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLV  371 (393)
T ss_pred             HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHH
Confidence            44555556666666666777777776544444 79999999988888 888888787755 5555 55667776666666


Q ss_pred             HHHHHHHHHHh
Q 010692          460 AAGIWFVGIFL  470 (503)
Q Consensus       460 ~~~~~~~~~~~  470 (503)
                      ...+.+.+++.
T Consensus       372 ~~~~~~~~~~~  382 (393)
T PRK11195        372 ALAMALLWRWH  382 (393)
T ss_pred             HHHHHHHHHHH
Confidence            66666655543

>PRK11010 ampG muropeptide transporter; Validated

Probab=100.00  E-value=7.1e-32  Score=263.56  Aligned_cols=383  Identities=13%  Similarity=0.068  Sum_probs=266.7

Q ss_pred             CCcchhhhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-
Q 010692           22 NLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-  100 (503)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-  100 (503)
                      +.|.+|+++||...+.++++...+...   ......    |...++.|.+.+++|.+ +.....+ ++.+++|+++||+ 
T Consensus         3 ~~~l~~~~~~~~~~~~~l~~~~gl~~~---~~~~~l----~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~   73 (491)
T PRK11010          3 SQYLRIFQQPNSAILLILGFASGLPLA---LTSGTL----QAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYT   73 (491)
T ss_pred             hhHHHHHcccHHHHHHHHHHHHHHHHH---HHHHHH----HHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHccc
Confidence            346788877876665555544444433   333334    44467889999999986 4444444 6899999999999 


Q ss_pred             ----CCchh-HHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHh
Q 010692          101 ----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP  172 (503)
Q Consensus       101 ----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~  172 (503)
                          |||+. ++.+.+..+++..+.++.   ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..
T Consensus        74 ~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~  153 (491)
T PRK11010         74 PPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYR  153 (491)
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence                99985 667877787887777775   5788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcC-cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692          173 TGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI  251 (503)
Q Consensus       173 ~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (503)
                      +|.++++.++.++.+ ..|||..|++.+++.++..+..++ .||+++..   ++++..                      
T Consensus       154 lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~---~~~~~~----------------------  207 (491)
T PRK11010        154 LAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTI---PVPKTL----------------------  207 (491)
T ss_pred             HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccc---ccccch----------------------
Confidence            999999999999988 579999999999887766555443 45532110   000000                      


Q ss_pred             chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH--Hh
Q 010692          252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG--GV  329 (503)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  329 (503)
                            +              +....++++.++++..|...+..+++.........+.+.|+.+..|.+.......  ..
T Consensus       208 ------~--------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~  267 (491)
T PRK11010        208 ------E--------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTL  267 (491)
T ss_pred             ------h--------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence                  0              0001345566777777766655555555555556677778777778887655332  34


Q ss_pred             hhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH---HHHHh-hhHHHHHHHHHHHHHHHhhccchhhHHhh
Q 010692          330 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCL  405 (503)
Q Consensus       330 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (503)
                      ..++.+++.+++|++.||+++|     +.+....++..+..+   ..... ++.+......++..++.+...+.......
T Consensus       268 g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~  342 (491)
T PRK11010        268 GLLATIVGALYGGILMQRLSLF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLM  342 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578899999999999999987     444333332222111   11111 23333333334433344444556677778


Q ss_pred             cccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010692          406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       406 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  466 (503)
                      +..+++.+++..|+.+...++ |..+++.+.|++.|..| |...|.+.+++.+.+.+....
T Consensus       343 ~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~  401 (491)
T PRK11010        343 TLCNKSFSATQFALLSALSAV-GRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLV  401 (491)
T ss_pred             HHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHH
Confidence            888889999999999888877 87778889999999887 877788777777666555543

>TIGR00895 2A0115 benzoate transport

Probab=100.00  E-value=4.7e-33  Score=268.18  Aligned_cols=357  Identities=17%  Similarity=0.198  Sum_probs=252.3

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      .|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+++++++.+++.|++.|++.
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  119 (398)
T TIGR00895        40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGL  119 (398)
T ss_pred             HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhccc
Confidence            36668999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|||+.|++.+++.++..++.++..||.++..
T Consensus       120 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (398)
T TIGR00895       120 GGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFL  199 (398)
T ss_pred             ccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHH
Confidence            99999999999999999999999999999999999999999999999899999999988777777666666667654321


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                      .++++++....   .++....... +.++...+    ++.++       +..++..+..++..+.+..+...+..++...
T Consensus       200 ~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (398)
T TIGR00895       200 VSKRPETVRRI---VNAIAPQMQA-EAQSALPE----QKATQ-------GTKRSVFKALFQGKTARITVLLWLLYFMLLV  264 (398)
T ss_pred             HhcCHHHHHHH---HHHHHHhccc-cccccccc----ccccc-------chhhHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence            11100000000   0000000000 00000000    00000       0000111111111122333444444445555


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      .......+.|.+ .+..+.++... .......++.+++.++.+++.||+++|     .......+......++.....+.
T Consensus       265 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  338 (398)
T TIGR00895       265 GVYFLTNWLPKL-MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSP  338 (398)
T ss_pred             HHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCH
Confidence            666677788844 44466665443 455667788899999999999999987     34433333333333333223455


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      +......++.+++.+...+.......+.+|++.|+++.|+.+...++ |..++|.+.|++
T Consensus       339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l  397 (398)
T TIGR00895       339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence            55566666777777777888888999999999999999999888887 888899888875

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=100.00  E-value=1.7e-31  Score=254.94  Aligned_cols=324  Identities=17%  Similarity=0.192  Sum_probs=240.4

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+
T Consensus        15 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~   94 (377)
T PRK11102         15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAA   94 (377)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            77789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++..+..||..+.. 
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  173 (377)
T PRK11102         95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE-  173 (377)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc-
Confidence            9999999999999999999999999999999999999999999998889999999998888777776666666532110 


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                         ++++.                                         +.++..+++++.+++|.++...+...+....
T Consensus       174 ---~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (377)
T PRK11102        174 ---RRQPF-----------------------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAG  209 (377)
T ss_pred             ---ccCCC-----------------------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence               00000                                         0000113455677888888777666666666


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH---HHHHhh
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCLS  377 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  377 (503)
                      ...+..+.|.++.+..+.++... .+.....++.+++.++.+++.||+++|     +.+..+..+.....+   .....+
T Consensus       210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~  284 (377)
T PRK11102        210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLVVSALLD  284 (377)
T ss_pred             HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66777788888888778776544 444666788889999999999999988     555444333222111   111111


Q ss_pred             -hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH
Q 010692          378 -SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       378 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                       +.+.......+.....+...........+.. |+.++++.++.+.....+|..+++.+.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~  343 (377)
T PRK11102        285 LGFWALVVGVAAFVGCVSMISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS  343 (377)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence             2232333333333333333344444555554 588999999987766554666666443

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.8e-32  Score=259.90  Aligned_cols=407  Identities=14%  Similarity=0.114  Sum_probs=300.6

Q ss_pred             CCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHH-
Q 010692           53 DSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-  131 (503)
Q Consensus        53 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-  131 (503)
                      .......+++.++++|+.+.++++|+.++....+.+..++.+.+.||||.|.+.+.|.++.++|.++.++++++|++++ 
T Consensus        61 ~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt  140 (509)
T KOG2504|consen   61 LINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLT  140 (509)
T ss_pred             chheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            3333445668889999999999999999999999999999999999999999999999999999999999999999887 


Q ss_pred             HHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          132 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       132 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      .-++.|+|.|..+.....++..+|+++ |+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+....
T Consensus       141 ~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~  219 (509)
T KOG2504|consen  141 FGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGAL  219 (509)
T ss_pred             HHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence            778889999999999999999888765 9999999999999999999999999999999999999999998777777777


Q ss_pred             ccccccCCCCcccccccccccccccCcc----cCCCCCc-ccc-ccchhhhhhhhcccchhhhhhhhhchH-HHHHHHhh
Q 010692          212 IKPLQLKGFAPAESGKAQVVASVSEGSE----ASNLNDH-VSE-DISDQASERSIKSIGESRFLNQLSQFS-QDTKVLLQ  284 (503)
Q Consensus       212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  284 (503)
                      +.|...+..++.+++......+......    .....+. ... ........++.+++...   ...+... .--.++++
T Consensus       220 ~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~ll~  296 (509)
T KOG2504|consen  220 LRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRN---SPLQAFLSMLDLSLLK  296 (509)
T ss_pred             cCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccc---cchhhhhhhhhHHHHc
Confidence            7765443322200000000000000000    0000000 000 00000000000000000   0000000 00147889


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-hhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      ++.++...+...+....+.....++|.|..+ .+.+. ....+.++.++..++++++.|++.|+...++.   .+...+.
T Consensus       297 ~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~l  372 (509)
T KOG2504|consen  297 DPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTL  372 (509)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHH
Confidence            9999999999999999999999999999986 55554 44466788899999999999999999884421   3334444


Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692          364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV  443 (503)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~  443 (503)
                      +...+..+......+.+.++....+.+++.+........++.+.++.++-..+.|+...+..+ +.++||++.|++.|.+
T Consensus       373 l~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~t  451 (509)
T KOG2504|consen  373 LIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDIT  451 (509)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeecc
Confidence            444444445555566667777777777777766666666888899999999999999877777 8999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692          444 NNWRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       444 g~~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                      |+|...|++.+.+.+++..+++...
T Consensus       452 g~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  452 GNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             CCeeeehhhcChHHHHHHHHHHHhH
Confidence            9999999999999988888877666

>TIGR00805 oat sodium-independent organic anion transporter

Probab=100.00  E-value=2.1e-31  Score=265.61  Aligned_cols=364  Identities=20%  Similarity=0.314  Sum_probs=265.4

Q ss_pred             CCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-----------
Q 010692           56 PTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----------  124 (503)
Q Consensus        56 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----------  124 (503)
                      .....+++++++|+++.++.|++.+.+.++++++.++.|+++||+|||+++.++.++++++++++++.+           
T Consensus        51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~  130 (633)
T TIGR00805        51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT  130 (633)
T ss_pred             HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence            344444888999999999999999999999999999999999999999999999999999999998764           


Q ss_pred             ----------------------------------------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHH
Q 010692          125 ----------------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL  164 (503)
Q Consensus       125 ----------------------------------------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~  164 (503)
                                                              .+..++++|+++|+|.+..++...+++.|++|+++|++++
T Consensus       131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~  210 (633)
T TIGR00805       131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI  210 (633)
T ss_pred             ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence                                                    2456788999999999999999999999999999999999


Q ss_pred             HHHHhHHhHHHHHHHHHHHhhcCcc----------------------hhHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Q 010692          165 SMFYMCIPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP  222 (503)
Q Consensus       165 ~~~~~~~~~G~~~g~~l~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~  222 (503)
                      ++++.+..+|.++|+++++++.+.+                      +||..|++.+++.++.++.++ +.|+..+....
T Consensus       211 ~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~  289 (633)
T TIGR00805       211 GILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGK  289 (633)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCccc
Confidence            9999999999999999999887532                      388889999888877776544 44543221100


Q ss_pred             ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692          223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI  302 (503)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (503)
                      .++.+... ++   ..+   ..   .+             +.+.......++..+.++.++++|.++...+..++.....
T Consensus       290 ~~~~~~~~-~~---~~~---~~---~~-------------~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~  346 (633)
T TIGR00805       290 RVNVDVHE-TE---KLE---KS---ED-------------KSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAF  346 (633)
T ss_pred             ccchhhhh-hh---ccc---cc---cc-------------ccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence            00000000 00   000   00   00             0000000112334466788999999999999999999999


Q ss_pred             hhhhccccchhhhhcccchhhH-HHHHhhhh-hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH--------
Q 010692          303 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT--------  372 (503)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------  372 (503)
                      +++..|+|.|+++.++.++... .+.....+ +.+++.+++|+++||++.+.+...++.+...++..+....        
T Consensus       347 ~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~  426 (633)
T TIGR00805       347 NGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCES  426 (633)
T ss_pred             HHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCC
Confidence            9999999999999999987655 33333343 5678999999999999876432222222222222111110        


Q ss_pred             -------------------HHH------------------------------------------h---------------
Q 010692          373 -------------------AFC------------------------------------------L---------------  376 (503)
Q Consensus       373 -------------------~~~------------------------------------------~---------------  376 (503)
                                         ...                                          .               
T Consensus       427 ~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~  506 (633)
T TIGR00805       427 APVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAK  506 (633)
T ss_pred             CccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCc
Confidence                               000                                          0               


Q ss_pred             --------hh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692          377 --------SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV  443 (503)
Q Consensus       377 --------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~  443 (503)
                              .. ...+++.+++..+..+....|.+.++.+.+|+++|+.+.|+.....+++|.+.+|+++|++.|..
T Consensus       507 ~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s  582 (633)
T TIGR00805       507 KGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS  582 (633)
T ss_pred             CCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence                    00 12233444444455556677888888999999999999999999999999999999999999864

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10054 putative transporter; Provisional

Probab=100.00  E-value=1.1e-31  Score=256.16  Aligned_cols=335  Identities=16%  Similarity=0.085  Sum_probs=244.5

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      +++++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.++++|++.|.+.+..
T Consensus        34 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  113 (395)
T PRK10054         34 LSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVF  113 (395)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            37889999999999999999999999999999999999999999999999999999999999999999999999888888


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA  223 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~  223 (503)
                      .+...++..|.+|+++|++++++.....++|.++||++++.+.+ .+||.+|++.+++.++..++..+..|+..+.    
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----  188 (395)
T PRK10054        114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA----  188 (395)
T ss_pred             HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence            88899999999999999999999999999999999999999875 6999999998888777665555555442111    


Q ss_pred             cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692          224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG  303 (503)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (503)
                      ++++..                                        +     ..+.++.+++|.++...+..++......
T Consensus       189 ~~~~~~----------------------------------------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~  223 (395)
T PRK10054        189 IATETG----------------------------------------S-----VWSPSVLLQDKALLWFTCSGFLASFVSG  223 (395)
T ss_pred             cccchh----------------------------------------h-----hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence            000000                                        0     0112456788888877766666555555


Q ss_pred             hhhccccchhhhhcc--cchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH-hhhH
Q 010692          304 AYSYWGPKAGYNIYH--MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSL  379 (503)
Q Consensus       304 ~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  379 (503)
                      .+..+.+.|.....+  .+.... .+.....+......+..+++.||.++|     +.+..+..+..+....... .++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~  298 (395)
T PRK10054        224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGNSL  298 (395)
T ss_pred             HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcchHH
Confidence            555566666644322  222222 233344445555667778899998887     5554444433333333322 2344


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      +.+.+...+.+.+.....+.....+.+..|++.++++.+..+ ..+. |..+||.+.|.+.|..| +...+++.+.+
T Consensus       299 ~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~  372 (395)
T PRK10054        299 LLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFVILALA  372 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHHHHHHH
Confidence            444555556666665556666777888888899999988764 4555 88999999999999987 44555554443

>PRK11043 putative transporter; Provisional

Probab=100.00  E-value=3.3e-31  Score=254.78  Aligned_cols=330  Identities=19%  Similarity=0.147  Sum_probs=240.8

Q ss_pred             CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      .|.+ +++.+++|.++++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|+++
T Consensus        26 ~p~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  104 (401)
T PRK11043         26 LPAF-KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQ  104 (401)
T ss_pred             HhhH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            3444 778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+.+|||+.|++.+++.++..++.++..|+ 
T Consensus       105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-  183 (401)
T PRK11043        105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS-  183 (401)
T ss_pred             HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC-
Confidence            9998888888889999999999999999999999999999999999999998999999999988877766655444322 


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      .+     ++++..                                             ...++++++++|.++...+...
T Consensus       184 ~~-----~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  213 (401)
T PRK11043        184 KK-----ARKQSQ---------------------------------------------DALTFKQLLKSKTYLGNVLIFA  213 (401)
T ss_pred             CC-----ccccch---------------------------------------------HHHHHHHHHcChhHHHHHHHHH
Confidence            11     000000                                             0034566777888776555555


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC  375 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (503)
                      +.......+..+.|.++++ .+.++... .......++.+++.++.+++.||+++|+..  +.......++.........
T Consensus       214 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~  290 (401)
T PRK11043        214 ACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASL  290 (401)
T ss_pred             HHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence            5555556667788888765 57776444 333444567788888899999999876311  1111111111111111111


Q ss_pred             --hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692          376 --LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV  443 (503)
Q Consensus       376 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~  443 (503)
                        .++.+..+....+.+++.+..++.......+.. |+++|++.|+.+..... +...++.+.|.+.|..
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~~  358 (401)
T PRK11043        291 LSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALISTP  358 (401)
T ss_pred             hccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCCC
Confidence              123333344445556666666666666655555 56899999999887666 6666788888887743

>PRK15011 sugar efflux transporter B; Provisional

Probab=100.00  E-value=9.5e-31  Score=250.21  Aligned_cols=342  Identities=10%  Similarity=0.066  Sum_probs=226.7

Q ss_pred             cccccCCCccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      +.+++|++.+++|++.+...+ ++.++.+++|+ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+
T Consensus        42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  120 (393)
T PRK15011         42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS  120 (393)
T ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            378999999999999876655 55566655555 9999999875 55666667888888899999988766655554455


Q ss_pred             hhhhchhhhhhccCCCCCc--hhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          142 SFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      ...|...+++.|+.++++|  +...++.+.+.++|.++||++++.+.+++|||..|++.+++.++..+..++..||.++.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~  200 (393)
T PRK15011        121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE  200 (393)
T ss_pred             hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC
Confidence            6788888888998876655  34557889999999999999999999889999999999988887777767666663211


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN  299 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (503)
                      .+  ++++..                   +                            ..++  +++..+..........
T Consensus       201 ~~--~~~~~~-------------------~----------------------------~~~~--~~~~~~~~~~~~~~~~  229 (393)
T PRK15011        201 LP--LATGTL-------------------E----------------------------APRR--NRRDTLLLFVICTLMW  229 (393)
T ss_pred             Cc--cccccc-------------------c----------------------------cccc--ccccHHHHHHHHHHHH
Confidence            00  000000                   0                            0000  0111122222223333


Q ss_pred             HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS  378 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (503)
                      .....+..+.|.|+++.++.++... .+.....+..+++.++.|+++||+++|     +.+.................++
T Consensus       230 ~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~  304 (393)
T PRK15011        230 GTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMAHS  304 (393)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHhh
Confidence            3444556688989988888876544 333445566778899999999999998     4444333333332222222334


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF  458 (503)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~  458 (503)
                      .+..+...++.++..+...+.......+..| ++++++.++.+...++ |..++|.+.|.+.|..| |+..+.+..++.+
T Consensus       305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~  381 (393)
T PRK15011        305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFWFALVMII  381 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence            4433433343434444434444455556555 5699999999888777 88999999999999876 7777776665555


Q ss_pred             HHHHHHH
Q 010692          459 LAAGIWF  465 (503)
Q Consensus       459 ~~~~~~~  465 (503)
                      ++.+...
T Consensus       382 ~~~~~~~  388 (393)
T PRK15011        382 ATLFCLL  388 (393)
T ss_pred             HHHHHHH
Confidence            5444433

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=100.00  E-value=4.1e-31  Score=253.51  Aligned_cols=325  Identities=13%  Similarity=0.076  Sum_probs=240.9

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.+++|.++.+.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+
T Consensus        32 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~  111 (394)
T PRK11652         32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTG  111 (394)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhh
Confidence            77789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+....+..|.+++++|+++.++.+.+..+|..++|.+++.+.+..|||+.|++.+++.++..++..+..||.++.  
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--  189 (394)
T PRK11652        112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPA--  189 (394)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCcc--
Confidence            888888889999999999999999999999999999999999999888999999999887776666555555653211  


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                         ++++.                                            +..++++..+++|.++...+..+.....
T Consensus       190 ---~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (394)
T PRK11652        190 ---DARRT--------------------------------------------RVLASYRTLLSNRRFNCYLLMLIGTLAG  222 (394)
T ss_pred             ---ccchh--------------------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence               00000                                            0014456677888887666655555555


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHH-HHHHHHHHHHHHHHH--hh
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAFC--LS  377 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~  377 (503)
                      ...+..+.+.++++..+.++... .+.....++.+++.++.+++.||.+++     .... ...............  ..
T Consensus       223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  297 (394)
T PRK11652        223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVM  297 (394)
T ss_pred             HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence            55556677888888778776443 333444555666666677777766632     2221 222222222111111  12


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                      +.+......++.+.+.+...+.......+..| +.+|++.++.+....+ |..+++.+.+.+.+.
T Consensus       298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~  360 (394)
T PRK11652        298 NVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT  360 (394)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence            33444555566666666777777777777664 6789999999877777 888888888877654

>TIGR00896 CynX cyanate transporter

Probab=100.00  E-value=8.9e-31  Score=247.51  Aligned_cols=331  Identities=14%  Similarity=0.057  Sum_probs=240.8

Q ss_pred             CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      ..+.+|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.
T Consensus        19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~   97 (355)
T TIGR00896        19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALI   97 (355)
T ss_pred             CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence            3445588899999999999999999999999999999999999999999999999998888887 788999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHHHHHHhccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKP  214 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p  214 (503)
                      |++.+...+....++.|++| ++|++++++++.+.++|..+++.+++.+.+..  +||+.|.+.+++.++...   ...|
T Consensus        98 g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~  173 (355)
T TIGR00896        98 GVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIP  173 (355)
T ss_pred             HHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhh
Confidence            99999888888889999986 57999999999999999999999998887654  399999887765433322   2234


Q ss_pred             cccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHH
Q 010692          215 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG  294 (503)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (503)
                      +..++   +++.+..                               +.              ...++++|+|.++...+.
T Consensus       174 ~~~~~---~~~~~~~-------------------------------~~--------------~~~~~~~~~~~~~~~~~~  205 (355)
T TIGR00896       174 QVRRR---VAANQTT-------------------------------TR--------------LTPVRIWRSPLAWQVTVF  205 (355)
T ss_pred             hhccc---cCCCCCC-------------------------------CC--------------CCCchhhcCHhHHHHHHH
Confidence            32111   0000000                               00              112345677888776666


Q ss_pred             HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692          295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA  373 (503)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (503)
                      .++....+.....|+|.|+++ .+.+.... .+.+...++.++++++.|++.||+++|+    ..+.....+..+..+..
T Consensus       206 ~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~  280 (355)
T TIGR00896       206 FGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGL  280 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHH
Confidence            666666777778899999987 46665443 4556778899999999999999995542    34434333333333323


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692          374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR  447 (503)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~  447 (503)
                      ....+..... ...+.+++.+...+.......+..+ ++.++...++.+...+. +..++|.+.|++.|..|+|.
T Consensus       281 ~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~  353 (355)
T TIGR00896       281 LFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWL  353 (355)
T ss_pred             HHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccC
Confidence            2222222222 3445566666666655555555444 46778889988777777 77789999999999888653

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-30  Score=243.97  Aligned_cols=388  Identities=14%  Similarity=0.118  Sum_probs=260.2

Q ss_pred             hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHhhhhhhhhchhhhh
Q 010692           75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFI  151 (503)
Q Consensus        75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i  151 (503)
                      .+.+++++.+|.++|+...|+++||+|||..+.++.++..++.++..++   +++..++++|++.|+..|.......-++
T Consensus        62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl  141 (485)
T KOG0569|consen   62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL  141 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            4778899999999999999999999999999999999888888877665   7889999999999999999999999999


Q ss_pred             hccCCCCCchhHHHHHHhHHhHHHHHHHHHHH--hhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccc
Q 010692          152 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ  229 (503)
Q Consensus       152 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  229 (503)
                      .|..|.+.||....+.+.+..+|..++..++.  .+.+...|++.+.+..+++++..+... +.||+++..-..+.++..
T Consensus       142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~k~~~~~  220 (485)
T KOG0569|consen  142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIKKGDEEE  220 (485)
T ss_pred             hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHHcCCHHH
Confidence            99999999999999999999999999988773  444566799999999988776666544 458887654321111100


Q ss_pred             cccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHH-----HHHHHHHHHhhh
Q 010692          230 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-----LGYIAYNFVIGA  304 (503)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  304 (503)
                       .+...+..+..++.++..++..++.++++.+++           ...+++++++++..+.-.     +.......+.+.
T Consensus       221 -A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~-----------~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~a  288 (485)
T KOG0569|consen  221 -ARKALKFYRGKEDVEAEIEEMLREIEEEELEKK-----------KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINA  288 (485)
T ss_pred             -HHHHHHHHhCCCcchhHHHHHHHHHHHhccccc-----------cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcce
Confidence             000011112222111111111111111111100           013456666665554432     222333444566


Q ss_pred             hhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----hhH
Q 010692          305 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL  379 (503)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  379 (503)
                      ..+|...++.+ .|.+.... ......+....+..+++.++.||.|||     ++++.+..++.+..+++...    +..
T Consensus       289 i~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~  362 (485)
T KOG0569|consen  289 IFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSF  362 (485)
T ss_pred             eHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66777777766 45665444 555677888999999999999999999     67766665555444333222    111


Q ss_pred             --H---HHHHHHHHHHHHHhhccchhhHH-hhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          380 --Y---GFLALFTVGELLVFATQAPVNYV-CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       380 --~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                        |   ..++..++..+.++.+.+|+.+. .+|.+|++.|+.+.++.....+. ..++-...+..+.+..|.  ..|+.+
T Consensus       363 ~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~--~~filF  439 (485)
T KOG0569|consen  363 GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGP--YVFILF  439 (485)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--hhhHHH
Confidence              1   23445555555666665555554 55777789999999999988888 767677788888888885  344444


Q ss_pred             HHHHHHHHHHHHHHHHhcc-cccccccccccccc
Q 010692          454 TSIFFLAAGIWFVGIFLKS-IDKFNEDGENQISL  486 (503)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  486 (503)
                      .+..++  ...+.++++|+ |+|+.+|+.++.++
T Consensus       440 ~i~~~~--~~i~~~~~lPETkgr~~~eI~~~~~~  471 (485)
T KOG0569|consen  440 VIPLAI--FLIYLYRYLPETKGRTPYEIIEELEK  471 (485)
T ss_pred             HHHHHH--HHHHHHHhCcccCCCCHHHHHHHHHh
Confidence            444332  33334456775 88887776655443

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=100.00  E-value=1e-30  Score=247.47  Aligned_cols=324  Identities=22%  Similarity=0.313  Sum_probs=275.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      +.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++.+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  102 (352)
T cd06174          23 PLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGG  102 (352)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccc
Confidence            66678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA  221 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (503)
                      ...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+..+||+.+++.+++.++..+...+..        
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  174 (352)
T cd06174         103 ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL--------  174 (352)
T ss_pred             cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence            999999999999999999999999999999999999999999999888999999999887776665544321        


Q ss_pred             cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV  301 (503)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (503)
                                                                                      |.++...+..++....
T Consensus       175 ----------------------------------------------------------------~~~~~~~~~~~~~~~~  190 (352)
T cd06174         175 ----------------------------------------------------------------RLLLLLALAFFLLSFG  190 (352)
T ss_pred             ----------------------------------------------------------------HHHHHHHHHHHHHHhH
Confidence                                                                            3455566666777777


Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHH-HHHHHHHHHHHHHHHHHHhhhH
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      ......+.|.+..+..+.+.... .......++..++.++.+++.||+++|     + .+..+..+..+........++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~  265 (352)
T cd06174         191 YYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAPSL  265 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhccH
Confidence            88888899999988767675544 555677788999999999999999998     6 6666666666655555555566


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL  459 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  459 (503)
                      +.......+.+.+.+...+.......+..|+++|++..|+.+...+. |..++|.+.|.+.|..+ ++..+.+.+++.++
T Consensus       266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i  343 (352)
T cd06174         266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLILAALALL  343 (352)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHHHHHHHHH
Confidence            66677777788888888888999999999999999999999988888 88899999999998765 77777777777666


Q ss_pred             HHHHH
Q 010692          460 AAGIW  464 (503)
Q Consensus       460 ~~~~~  464 (503)
                      +.+..
T Consensus       344 ~~i~~  348 (352)
T cd06174         344 AALLL  348 (352)
T ss_pred             HHHHh
Confidence            55543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.98  E-value=9.6e-31  Score=248.90  Aligned_cols=326  Identities=17%  Similarity=0.126  Sum_probs=230.0

Q ss_pred             cccccc-cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHH
Q 010692           58 PSWFTP-KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRML  135 (503)
Q Consensus        58 ~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l  135 (503)
                      ++++|. +++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++.+++++++ +++.+++.|++
T Consensus        21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  100 (366)
T TIGR00886        21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLF  100 (366)
T ss_pred             HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            333364 6899999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC----------cchhHHHH-HHHHHHHHH
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLP  204 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f-~~~~~~~~~  204 (503)
                      +|++.+. .+...+++.|++|+++|++++++.....++|..+++.+++.+..          ..+||+.| +..+++..+
T Consensus       101 ~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  179 (366)
T TIGR00886       101 IGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL  179 (366)
T ss_pred             HHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence            9998664 56678999999999999999999998888888888877766553          34899999 444655555


Q ss_pred             HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692          205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ  284 (503)
Q Consensus       205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (503)
                      ..++.+...+|.++..++  +++..          ....    ...      .+  +            ...+..++.++
T Consensus       180 ~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~----~~~------~~--~------------~~~~~~~~~~~  223 (366)
T TIGR00886       180 PALLIFFVGADTPPGKPA--TGKLS----------FKGA----RWS------VG--T------------GALGDQLKVFR  223 (366)
T ss_pred             HHHHHHHhcccCCccccc--chhcc----------cccc----ccc------cc--c------------hhHHHHHHHHh
Confidence            555555555543321100  00000          0000    000      00  0            00013445677


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      +|.++...+..++.......+..+.|.|+++.++.++... .+..+..+..+++.++.+++.||+++|     +......
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~  298 (366)
T TIGR00886       224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSF  298 (366)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHH
Confidence            8888887777776666777788899999998888876544 455667778889999999999999987     3333222


Q ss_pred             HHHHH-HHHHHHHhh---hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          364 FLGAI-SCLTAFCLS---SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       364 ~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      ..... ..++.....   +.+.......+...+.+...+.......+.. |+++|+++|+.+...++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~  364 (366)
T TIGR00886       299 LGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLVGAIGNL  364 (366)
T ss_pred             HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHHHHhccC
Confidence            22222 222222222   3444444444555555666666666666655 47899999998877665

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.98  E-value=3.1e-30  Score=245.68  Aligned_cols=340  Identities=12%  Similarity=0.004  Sum_probs=255.1

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      |.+.+|+|.|.+++|++.+++.+...++++++|+++||+|||+..    ..+..+..+  ..+..+++++.+++.|+++|
T Consensus        28 ~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~  105 (382)
T TIGR00902        28 PAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFA  105 (382)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHH
Confidence            666789999999999999999999999999999999999985433    222222222  24456789999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      .+.+...|...++..++  +++|+++++......++|.+++|++++.+.+.+|||..|++.++... ..++.+...|+.+
T Consensus       106 ~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~  182 (382)
T TIGR00902       106 LFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIP  182 (382)
T ss_pred             HHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCC
Confidence            99888889888887765  46789999999999999999999999999999999999988765532 2222233222211


Q ss_pred             CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692          218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA  297 (503)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (503)
                      ++    ++.+..   +                         .+              ..++.++++|+|+++...+..++
T Consensus       183 ~~----~~~~~~---~-------------------------~~--------------~~~~~~~~l~~~~~~~~l~~~~l  216 (382)
T TIGR00902       183 PK----DAIPED---E-------------------------SQ--------------GDSAFIALLKNPMNLRFLAAVCL  216 (382)
T ss_pred             CC----cccccc---c-------------------------cc--------------cchhHHHHHcChHHHHHHHHHHH
Confidence            10    000000   0                         00              01335678899999998888888


Q ss_pred             HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      .......+..+.|.|+++ .|.++... ....+..++.+++.++.+++.||++.|     +.+..+.+...+........
T Consensus       217 ~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~  290 (382)
T TIGR00902       217 IQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAIIGAI  290 (382)
T ss_pred             HHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHHHhH
Confidence            778888888899999987 67776444 334456677788888888999999887     67777777666666666666


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      ++.+..+...++-++..+...+....++.+. |+++++++.++.+.....+|..++|.+.|++.|..| + ..|...+++
T Consensus       291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~  367 (382)
T TIGR00902       291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAII  367 (382)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHH
Confidence            7777777778888888888888888888877 888899999998755444488999999999999987 4 556666666


Q ss_pred             HHHHH
Q 010692          457 FFLAA  461 (503)
Q Consensus       457 ~~~~~  461 (503)
                      .+++.
T Consensus       368 ~~~~~  372 (382)
T TIGR00902       368 AAAAF  372 (382)
T ss_pred             HHHHH
Confidence            55443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.98  E-value=5.5e-31  Score=231.89  Aligned_cols=348  Identities=15%  Similarity=0.058  Sum_probs=257.5

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      ++.+-+++++|++.+.+.+...+.+++.|.+.||+|+|..+++|++++..+++++++.++++.++++|.+||+|.+...+
T Consensus        99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t  178 (464)
T KOG3764|consen   99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT  178 (464)
T ss_pred             cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence            34555778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhccCCCCC-chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCccc
Q 010692          146 LAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE  224 (503)
Q Consensus       146 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  224 (503)
                      ++.++++|.+|+++ |++++|+.-.+.++|.++||+.||.+.+..|.+.+|++.+++.++-..+.++..+.+..+.+  +
T Consensus       179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--~  256 (464)
T KOG3764|consen  179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--S  256 (464)
T ss_pred             hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--c
Confidence            99999999999764 79999999999999999999999999999999999999999999999888888743211100  0


Q ss_pred             ccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhh
Q 010692          225 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA  304 (503)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (503)
                      ..+ .                                               .++++++++|..+.........+.....
T Consensus       257 ~~~-~-----------------------------------------------~~~~~Ll~dP~I~~~agai~~~n~~laf  288 (464)
T KOG3764|consen  257 TEQ-G-----------------------------------------------TPMWSLLMDPYILLIAGAITFSNSSLAF  288 (464)
T ss_pred             ccc-C-----------------------------------------------ccHHHHHhCchHhhhhcchhhccchHHH
Confidence            000 0                                               3467888999888777655555555555


Q ss_pred             hhccccchhhhhcccchhhHHHH-HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 010692          305 YSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL  383 (503)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (503)
                      ..-.++.+..+....+.....+. ....+...++..+.|.+.||++..+   +.....+.++...........++...++
T Consensus       289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~gl~~~G~~~~~iP~~~~~~~L~  365 (464)
T KOG3764|consen  289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLGGLATVGVSSGPIPFATSIAQLW  365 (464)
T ss_pred             hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh---HHHHHHHHHHHHHHhchhHhhhhHHHHh
Confidence            55566666777666443233333 3445778899999999999999542   0222333333333333333334443333


Q ss_pred             HHH---HHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          384 ALF---TVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       384 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      +..   ++.+........|......+....+   .-|...++......+ |..+||.++|.+.+..| +.+...+.++..
T Consensus       366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~n  443 (464)
T KOG3764|consen  366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGILN  443 (464)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHHH
Confidence            333   3333333344445555555544444   668899999877777 99999999999999988 777766666666


Q ss_pred             HHHHHHHHHHH
Q 010692          458 FLAAGIWFVGI  468 (503)
Q Consensus       458 ~~~~~~~~~~~  468 (503)
                      +.-.-+....+
T Consensus       444 ~iyapvl~ll~  454 (464)
T KOG3764|consen  444 LIYAPVLLLLR  454 (464)
T ss_pred             HHHHHHHHHHH
Confidence            55555554444

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.97  E-value=2.6e-30  Score=248.68  Aligned_cols=335  Identities=14%  Similarity=0.090  Sum_probs=233.9

Q ss_pred             CCccchhhHHHH-----HHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHH--------HHHHHHHHH
Q 010692           70 LNNFQDGVLSSA-----FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLV  136 (503)
Q Consensus        70 ~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~  136 (503)
                      .++++.+.+.+.     ..++..+++++.|+++||+|||+++..+.++.+++.++++++++++        .++++|+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~  106 (394)
T TIGR00883        27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ  106 (394)
T ss_pred             CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence            455666665443     3334456899999999999999999999999999999999998875        478899999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc--------CcchhHHHHHHHHHHHHHHHHH
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVL  208 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~  208 (503)
                      |++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+.        +.++||+.|++.+++.++..++
T Consensus       107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  186 (394)
T TIGR00883       107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL  186 (394)
T ss_pred             HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998876653        3568999999877665543332


Q ss_pred             HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhh-
Q 010692          209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-  287 (503)
Q Consensus       209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  287 (503)
                       ....||.++...++++++                                +.              ..+.++.++++. 
T Consensus       187 -~~~~~~~~~~~~~~~~~~--------------------------------~~--------------~~~~~~~~~~~~~  219 (394)
T TIGR00883       187 -RRNLEETPVFEKAQEKHK--------------------------------KK--------------RGPIRETLTKHRK  219 (394)
T ss_pred             -HHhcCCChhHHHHHhccc--------------------------------cc--------------cCCHHHHHHhchH
Confidence             222333211100000000                                00              012233444443 


Q ss_pred             -HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          288 -YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       288 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                       ++......++..........+.|.|+++..+.++... .......+...++.++.+++.||+++|     +.+.....+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~  294 (394)
T TIGR00883       220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-----PVLIIFTVL  294 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHH
Confidence             5555555566666677777889999988777775444 444566778889999999999999988     444332222


Q ss_pred             HH-HHH-HHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          366 GA-ISC-LTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       366 ~~-~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      .. ... ......  ++.+......++.+++.+...++....+.+.+|++.|+++.++.+...+..|..++|.+.|++.|
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~  374 (394)
T TIGR00883       295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA  374 (394)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence            22 221 111111  23444444555566666677788888999999999999999986555554488889999999999


Q ss_pred             hhhhHHHHHHHHHHH
Q 010692          442 HVNNWRKTTLALTSI  456 (503)
Q Consensus       442 ~~g~~~~~~~~~~~~  456 (503)
                      ..|.+...++....+
T Consensus       375 ~~g~~~~~~~~~~~~  389 (394)
T TIGR00883       375 MTGDWYAIGYYLAAL  389 (394)
T ss_pred             HcCcchhHHHHHHHH
Confidence            887555544444433

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.4e-29  Score=224.93  Aligned_cols=348  Identities=16%  Similarity=0.121  Sum_probs=276.0

Q ss_pred             CchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHH
Q 010692           37 PPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFA  116 (503)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~  116 (503)
                      ..++...++.++.....+    .++|.+++.|++|..|.+++..+++.++.+++++.|++.+|+|+|+.++.|+.+++++
T Consensus        16 v~~t~lFfl~G~~~~l~d----iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg   91 (422)
T COG0738          16 VLLTSLFFLWGFITCLND----ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG   91 (422)
T ss_pred             HHHHHHHHHHHHHhhcch----hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            334444555555333333    3447779999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhh---hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-----
Q 010692          117 TAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-----  188 (503)
Q Consensus       117 ~~~~~---~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-----  188 (503)
                      ..+..   ...+|..++.+-++.|.|.+...+..+.++....++++..+.+++.+..+++|.++||++++.+..+     
T Consensus        92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~  171 (422)
T COG0738          92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT  171 (422)
T ss_pred             HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence            99985   5578899999999999999999999999999999998899999999999999999999999987752     


Q ss_pred             --------------chhHHHHHHHHHHHHHHHHHHHhcc-ccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692          189 --------------LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD  253 (503)
Q Consensus       189 --------------~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (503)
                                    ..||++|...+...++..+...... |+....  .+++.+..                        
T Consensus       172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~--~~~~~~~~------------------------  225 (422)
T COG0738         172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA--APSLGASG------------------------  225 (422)
T ss_pred             cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc--cccccccc------------------------
Confidence                          2488889888877666665554443 321111  00000000                        


Q ss_pred             hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhh
Q 010692          254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV  332 (503)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  332 (503)
                                          +  ....+++++|+++...++.+++.........|++.|+.+..+.+..+. ...+..++
T Consensus       226 --------------------~--~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~  283 (422)
T COG0738         226 --------------------S--AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWV  283 (422)
T ss_pred             --------------------c--chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence                                0  135678899999999999999999999999999999999878776555 56678889


Q ss_pred             hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCC
Q 010692          333 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL  412 (503)
Q Consensus       333 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (503)
                      +.++|++++.++..|+...     +.+....+.....++.....++ ...+....+.+.+.+..+|...+...+..+ ++
T Consensus       284 ~~~vGRFig~~lm~~~~~~-----k~Laf~a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~  356 (422)
T COG0738         284 GFMVGRFIGSALMSRIKPE-----KYLAFYALIAILLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EH  356 (422)
T ss_pred             HHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc
Confidence            9999999999999999887     7777777777766666666666 344455666778889999999999999998 44


Q ss_pred             chhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692          413 RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN  445 (503)
Q Consensus       413 ~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~  445 (503)
                      ...+.++.  +..++|+++-|++.|++.|..|.
T Consensus       357 ts~~s~~l--~maivGGAiiP~l~G~i~d~~g~  387 (422)
T COG0738         357 TSVGSGLL--VMAIVGGAIIPPLQGVIADMFGI  387 (422)
T ss_pred             ccccceee--eeheecchHHHHHHHHHHHhhhh
Confidence            55555554  44455888899999999999884

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=99.97  E-value=2.1e-29  Score=248.27  Aligned_cols=393  Identities=15%  Similarity=0.135  Sum_probs=259.5

Q ss_pred             chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692           74 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD  153 (503)
Q Consensus        74 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~  153 (503)
                      +.+++.+.+.++..+++++.|+++|++|||+.++++.+++.++++++++++|++.++++|+++|+|.|......+.+++|
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE  169 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE  169 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccccccccc
Q 010692          154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA  232 (503)
Q Consensus       154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  232 (503)
                      ..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.||++++.-+..+.+..  +
T Consensus       170 iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a--~  246 (513)
T KOG0254|consen  170 IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA--K  246 (513)
T ss_pred             cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH--H
Confidence            99999999999999999999999996666655443 58999999999998888888 77778877654332211111  0


Q ss_pred             ccccCcccCC--CCCccccccchhhhhhhhcccchhhhhhhhhchHHHHH-HHhhhhhHHHHHHHHHHHHHHhhhhhccc
Q 010692          233 SVSEGSEASN--LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK-VLLQEKVYVVNVLGYIAYNFVIGAYSYWG  309 (503)
Q Consensus       233 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (503)
                      .....+....  +.+++.+++......+......        +..+.++. ...+++.+....+..+.+..+.+...+|.
T Consensus       247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~  318 (513)
T KOG0254|consen  247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG--------KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYS  318 (513)
T ss_pred             HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc--------cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeeh
Confidence            0011111100  0001111111000000000000        00011111 12233445555565666667778888899


Q ss_pred             cchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh------------
Q 010692          310 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------  377 (503)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  377 (503)
                      +.+++..+..++. .....+.++..+++.+++.++.||+|||     ++++.+.....+..++.....            
T Consensus       319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~  392 (513)
T KOG0254|consen  319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKG  392 (513)
T ss_pred             HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence            9888775544433 4444566677788888889999999998     666655555444443332211            


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHh-hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      ..+..++..++....+...+.+..+.+ .|.+|.+.|+.+.++.....+.....+ ......+.+..+ ....|..++..
T Consensus       393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~~  470 (513)
T KOG0254|consen  393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGGI  470 (513)
T ss_pred             hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHHH
Confidence            123444555555556666777777755 566666999999999988888855444 434444444432 12344444444


Q ss_pred             HHHHHHHHHHHHHhc-ccccccccccccccc
Q 010692          457 FFLAAGIWFVGIFLK-SIDKFNEDGENQISL  486 (503)
Q Consensus       457 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  486 (503)
                      ..+.... +...+.| +|+++.|++++...+
T Consensus       471 ~~~~~~~-fv~~~~pETkg~sleei~~~~~~  500 (513)
T KOG0254|consen  471 CLLSLII-FVFFFVPETKGLTLEEINELFEE  500 (513)
T ss_pred             HHHHHHH-HheEEcccCCCCcHHHHHHHHHc
Confidence            3333331 2222445 488888877765443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.97  E-value=5.4e-29  Score=237.28  Aligned_cols=337  Identities=12%  Similarity=0.033  Sum_probs=239.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc----hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      |.+.+|+|.|.+++|++.+++.++..++++++|++.||+|||    +.+.++..+.  .......++++|.+++.|++.|
T Consensus        28 ~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g  105 (382)
T PRK11128         28 SVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFN  105 (382)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHH
Confidence            555688999999999999999999999999999999999994    3333222222  2233444688999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      ++.+...+...+++.++  .++|+++++......++|..+||++++++.+++|||..|++.++..++..+ ..+..||..
T Consensus       106 ~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~  182 (382)
T PRK11128        106 LFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIM  182 (382)
T ss_pred             HHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCC
Confidence            99988888888888877  355888999999999999999999999999999999999988765444333 333334321


Q ss_pred             CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692          218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA  297 (503)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (503)
                      +    ++++++.                            .  +            +...++++++|+|.++...+..++
T Consensus       183 ~----~~~~~~~----------------------------~--~------------~~~~~~~~i~~~~~~~~~~~~~~l  216 (382)
T PRK11128        183 P----QGESRQQ----------------------------E--S------------AGWPAWKALLKEPTVWRFLLCVSL  216 (382)
T ss_pred             C----ccccccc----------------------------c--c------------cccchHHHHHcChhHHHHHHHHHH
Confidence            1    0000000                            0  0            001346678899999988777776


Q ss_pred             HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      ..........+.|.|+.+ .|.++... .+..+..+..++..++.+++.||+++|     +.+..+.....+..+.....
T Consensus       217 ~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~~~~  290 (382)
T PRK11128        217 LQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLMGST  290 (382)
T ss_pred             HHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHhh
Confidence            666666677777888866 56665433 333455667777888899999999887     56555555555544444455


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      ++.+..++..++.+++.+...+....+..+. +++++++..++.+...+..|..++|.+.|.+.|..|.  ..++..+++
T Consensus       291 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~~~~~~~~~  367 (382)
T PRK11128        291 TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--GVFWVMALV  367 (382)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHH
Confidence            6666666667777777776666666666664 5666788888886555444778899999999999873  345554444


Q ss_pred             HH
Q 010692          457 FF  458 (503)
Q Consensus       457 ~~  458 (503)
                      .+
T Consensus       368 ~~  369 (382)
T PRK11128        368 AL  369 (382)
T ss_pred             HH
Confidence            33

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.97  E-value=3.2e-29  Score=271.45  Aligned_cols=344  Identities=14%  Similarity=0.009  Sum_probs=245.7

Q ss_pred             ccccCCCc-cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH---HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           65 RGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      ..+.+.+. ...++..+++.++++++++++|+++||+|||+++..   ..++..+..+.+...++++.++++|+++|++.
T Consensus        43 ~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~  122 (1140)
T PRK06814         43 SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHS  122 (1140)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            44444433 346888999999999999999999999999997533   22333333333444589999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...|+..+++.+++++++|++++++.+++.++|.++||++++++....+|++.|+..++..++ .+++.+..|+.....
T Consensus       123 a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  201 (1140)
T PRK06814        123 ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAA  201 (1140)
T ss_pred             HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999555444443 333444444422110


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                        ++.....                                        ...++....++.+.+++.++...+..++..+
T Consensus       202 --~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (1140)
T PRK06814        202 --PDLKIDR----------------------------------------NIIRSTITLLKYAKADKRIWLAILGISWFWL  239 (1140)
T ss_pred             --CCCeecc----------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence              0000000                                        0001112456778899999998888777777


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH----
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----  375 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  375 (503)
                      ....+..++|.|+++.++.++... .+.+...++.++|.++.+++.|+..++.    .......+.++....+...    
T Consensus       240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~  315 (1140)
T PRK06814        240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL----YVPIGALLMGLFGLDLAFASSSV  315 (1140)
T ss_pred             HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee----eehHHHHHHHHHHHHHHhccccc
Confidence            777888899999999888876544 4556777889999999999998766552    2222222222211111110    


Q ss_pred             ---------------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692          376 ---------------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       376 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                                     ..+.+..++..++.+++.+...++..+++.+..|++.+|+++|+.++...+ +..+++.+.|.+.
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g~l~  394 (1140)
T PRK06814        316 PAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILALLQ  394 (1140)
T ss_pred             ccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHHHHH
Confidence                           134455556666677777777888899999999999999999999988777 8888999999887


Q ss_pred             hhhhhHHHHHHHHHHH
Q 010692          441 DHVNNWRKTTLALTSI  456 (503)
Q Consensus       441 ~~~g~~~~~~~~~~~~  456 (503)
                      +...++...+++.+.+
T Consensus       395 ~~~~~~~~~~~~~~~~  410 (1140)
T PRK06814        395 ALGFSIPWIILFIALA  410 (1140)
T ss_pred             HhccCHHHHHHHHHHH
Confidence            6544454555444433

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.97  E-value=2.4e-29  Score=243.06  Aligned_cols=349  Identities=16%  Similarity=0.089  Sum_probs=223.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hhhH-----HHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFD-----FWSIAICRMLV  136 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l~  136 (503)
                      .+++|++..+.|++.+++.++..++++++|+++||+|||++++++..+.+++.....   .++.     +...++++++.
T Consensus        38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (420)
T PRK09528         38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL  117 (420)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            667999999999999999999999999999999999999999887766655543221   1111     11122233333


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |.+.....+....+..+ . .+++++.++......++|..++|++++.+.+ .+|++.|++.++++++..++.++..|+.
T Consensus       118 ~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~  194 (420)
T PRK09528        118 GFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDA  194 (420)
T ss_pred             hhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccc
Confidence            33333223333333222 2 2457788899999999999999999999876 4899999998888777666655554432


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      +++.   +.+++.                   +        ++++           +...++.+..+|+|.++...+...
T Consensus       195 ~~~~---~~~~~~-------------------~--------~~~~-----------~~~~~~~~~~l~~~~~~~l~l~~~  233 (420)
T PRK09528        195 PSTA---KVANAL-------------------G--------ANAS-----------AVSLKDALALLKLPKFWFLVLYVI  233 (420)
T ss_pred             cchh---hhccch-------------------h--------cccc-----------cccHHHHHHHccCCCeEeehHHHH
Confidence            1110   000000                   0        0000           000133456778888776655444


Q ss_pred             HHHHHhhhhhccccchhhhhc---ccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIY---HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT  372 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (503)
                      ...........+.|.|+.+..   +.+.... .+.++..+...++.++.|++.||+++|     +.+..+.++..+...+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~l  308 (420)
T PRK09528        234 GVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVRIIG  308 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHHH
Confidence            444444445556677766543   2232222 334555667788999999999999998     5555545544444444


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH-HHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      ....++.+..+....+.+...+...+....+..+..|++.+++..+. .+...++ |.+++|.+.|++.|..| |+..|.
T Consensus       309 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l-g~~ig~~~~G~l~~~~G-~~~~f~  386 (420)
T PRK09528        309 SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL-GAVFLSTLAGNLYDSIG-FQGTYL  386 (420)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH-HHHHHHHHHHHHHHhhC-chHHHH
Confidence            44445555555555555555545555566777888888989888765 4555556 88899999999999887 888888


Q ss_pred             HHHHHHHHHHHHH
Q 010692          452 ALTSIFFLAAGIW  464 (503)
Q Consensus       452 ~~~~~~~~~~~~~  464 (503)
                      ..+++.++..++.
T Consensus       387 ~~~~~~~i~~~~~  399 (420)
T PRK09528        387 ILGGIVLLFTLIS  399 (420)
T ss_pred             HHHHHHHHHHHHH
Confidence            8777655554433

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.97  E-value=2.6e-28  Score=235.94  Aligned_cols=347  Identities=16%  Similarity=0.143  Sum_probs=268.5

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGE  140 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~g~  140 (503)
                      .+..-|+..++++.++..+...+.++++|.++||++||++++.+.++.++..++.++.     .+.|.+++.-++.|++.
T Consensus        38 ~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~  117 (524)
T PF05977_consen   38 TQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS  117 (524)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH
Confidence            4556688899999999999999999999999999999999999998887766555443     47889999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...|+.++++.|..|+++...+.++.+...++..++||.++|.+...+|-.+.|.+.++..++.........++..+. 
T Consensus       118 a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~-  196 (524)
T PF05977_consen  118 AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS-  196 (524)
T ss_pred             HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc-
Confidence            9999999999999999999999999999999999999999999999888999999998876665544443332221000 


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                         +..++                                         +..++....++.+.++|.+...++..++++.
T Consensus       197 ---~~~~e-----------------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l  232 (524)
T PF05977_consen  197 ---SLPRE-----------------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLFNL  232 (524)
T ss_pred             ---ccchh-----------------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence               00000                                         1112233556667777877766665555555


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      ....+...+|.+.++..+.++... .+.+..+++.++|.++.+++.+|++++     +++..+.+......+.....++.
T Consensus       233 ~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~~~  307 (524)
T PF05977_consen  233 FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSPSF  307 (524)
T ss_pred             hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcchHH
Confidence            555666778999988888876655 455778888899999988888888776     56655665555555666666777


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL  459 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  459 (503)
                      +...+.+++.|++.........+..++..|++.||+++++.++.... +..+|..+.|.+.+..| ...++.+.++..++
T Consensus       308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~~lll  385 (524)
T PF05977_consen  308 WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGAALLL  385 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence            77777788888888887788888999999999999999999888777 88889999999999887 44566655554444


Q ss_pred             HHHHH
Q 010692          460 AAGIW  464 (503)
Q Consensus       460 ~~~~~  464 (503)
                      +.++.
T Consensus       386 ~~~~~  390 (524)
T PF05977_consen  386 SALIA  390 (524)
T ss_pred             HHHHH
Confidence            44433

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.97  E-value=5.3e-28  Score=211.47  Aligned_cols=361  Identities=14%  Similarity=0.065  Sum_probs=280.3

Q ss_pred             HHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh
Q 010692           42 EAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG  121 (503)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~  121 (503)
                      ...+...|........+++++++++|+|+|.+..|++.++..++..+.+++..+++.|+|.++.+..++++.++|.++-.
T Consensus        16 gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~   95 (395)
T COG2807          16 GIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRS   95 (395)
T ss_pred             HHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence            34445566666666677777999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHH
Q 010692          122 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAI  200 (503)
Q Consensus       122 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~  200 (503)
                      .. +.+.++.+-.+.|.|.+...+..+.+|.+.||++ -+..++++....++|..+++.+...+.++. |||......++
T Consensus        96 ~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl  173 (395)
T COG2807          96 LG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL  173 (395)
T ss_pred             cc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence            87 8889999999999999999999999999999876 899999999999999999999999998877 79999999998


Q ss_pred             HHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHH
Q 010692          201 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK  280 (503)
Q Consensus       201 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (503)
                      ++++..+.++.   ...+.+....+.+.                                                .+-.
T Consensus       174 ~allAl~~WlP---q~~r~~~~~~~~~~------------------------------------------------~~~~  202 (395)
T COG2807         174 LALLALLIWLP---QALREQAASIATKL------------------------------------------------VSVR  202 (395)
T ss_pred             HHHHHHHHHhh---hccccccccccccc------------------------------------------------cccc
Confidence            88777766553   32111100000000                                                1123


Q ss_pred             HHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          281 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      .++|+|.-|.+.+.+.+....++....|+|.++.|. |.++.. ..+.++..+.+++..+....+.+|...++    .+.
T Consensus       203 ~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~  277 (395)
T COG2807         203 KVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLV  277 (395)
T ss_pred             ccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHH
Confidence            578999999999999999999999999999999985 566544 46667888899999999999999855442    444


Q ss_pred             HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhH
Q 010692          360 SAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      +....+..+......+.+  ..+.+   .++.|++.+..++.....+..... ++..+.-.|+.+...+++++ +||.+.
T Consensus       278 ~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa-~GP~l~  353 (395)
T COG2807         278 VLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA-FGPWLF  353 (395)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh-hhhhhH
Confidence            444444433333332322  33333   356666667777766666665544 47788888888888888554 499999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692          437 GVLQDHVNNWRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       437 g~l~~~~g~~~~~~~~~~~~~~~~~~~~  464 (503)
                      |++.|.+|+|...+...+.+.+...+..
T Consensus       354 G~lhDa~gsw~~~~~~l~~~~i~m~i~G  381 (395)
T COG2807         354 GFLHDATGSWSAPLVLLALATLLMLIFG  381 (395)
T ss_pred             hHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence            9999999999888877766655444443

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.97  E-value=1.3e-28  Score=268.03  Aligned_cols=331  Identities=12%  Similarity=0.032  Sum_probs=239.0

Q ss_pred             ccccCCCc--cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhh
Q 010692           65 RGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        65 ~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~g  139 (503)
                      ..+++.+.  ...+++.+++.+++.++++++|+++||+|||++++++.++..++.++..   .+++++.++++|+++|++
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  116 (1146)
T PRK08633         37 IKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQ  116 (1146)
T ss_pred             HHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence            45566543  4468999999999999999999999999999999998877666655543   457899999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc---------chhHHHHHHHHHHHHHHHHHHH
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      .+...++..+++.|++|+++|++++++.+.+..+|.++|+++++++...         .+|++.+.+..+...+..++..
T Consensus       117 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (1146)
T PRK08633        117 SAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFA  196 (1146)
T ss_pred             HHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765         2345555444444333444444


Q ss_pred             hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692          211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV  290 (503)
Q Consensus       211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (503)
                      +..|+.+......++.+..                                        ...+.....++.+++++.++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~~~~~  236 (1146)
T PRK08633        197 YRLPKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLRSDRVLWL  236 (1146)
T ss_pred             hcCcCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHhcCcHHHH
Confidence            4445532211100000000                                        000111244667788888888


Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchh-hH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI  368 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~  368 (503)
                      ..+..++..........++|.|+.+.++.+.. .. .+.....++.+++.++.+++.||++++     +.+..+.++.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~  311 (1146)
T PRK08633        237 AIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALGLAL  311 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHHHHH
Confidence            77766666666667778889999888888765 33 455666788889999999999999876     444444443333


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          369 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      ..++.....+.+..++..++.+++.+...++...++.+..|++.||+++|+.+.+.++ |.++++.+.+.+..
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~  383 (1146)
T PRK08633        312 SLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG  383 (1146)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            3334444445555666666777777777778888888989999999999999888877 77766666555543

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.97  E-value=1.1e-28  Score=227.34  Aligned_cols=363  Identities=10%  Similarity=0.011  Sum_probs=248.4

Q ss_pred             hhHHHHHHhhhcccCCCCCcccccccccccCCCccc-hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH
Q 010692           39 PLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQ-DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT  117 (503)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~  117 (503)
                      +|+..|+..+     -+..|...|.+.+|+|+|++| .|.+.+++..++++++++.|+++||+|.|+++.++.+.+++.+
T Consensus        32 lC~fGF~~e~-----R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t  106 (511)
T TIGR00806        32 LCFYGFMAQF-----RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW  106 (511)
T ss_pred             HHHHHHHHHh-----hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence            4555555433     334455567778999999999 9999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHH
Q 010692          118 AGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG  197 (503)
Q Consensus       118 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~  197 (503)
                      ++.+++++++.+.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++++ ..+|||+-+.+
T Consensus       107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~L  184 (511)
T TIGR00806       107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTL  184 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHH
Confidence            999999999999999999999999999 9999999999999999999999999999999999999994 46799976544


Q ss_pred             H--HHHHHHHHHHHHhccccccCCC--CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692          198 E--AILMLPFAVLAFVIKPLQLKGF--APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS  273 (503)
Q Consensus       198 ~--~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (503)
                      .  .+.+...++++.+++|...+..  ++++..+..    ...+.+.....+   .  .    ......+  .......+
T Consensus       185 n~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~----~~~~~~~~~~~~---~--~----~~~~~~~--~~~~~~~~  249 (511)
T TIGR00806       185 NIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGA----LPCELDQMVPGP---G--G----KLEDYLG--TCRDSFLV  249 (511)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCchhhhhccccccccc----cccccccCCCCC---c--c----ccchhhh--hhhhHHHH
Confidence            3  2233344444455555322210  010000000    000000000000   0  0    0000000  01113345


Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-hhHHHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692          274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATI  352 (503)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~  352 (503)
                      ..+.+++...+|+.+....+-+.+...+++.+.+|......+....++ .....-++..+.+.+..+..|++-.+..+. 
T Consensus       250 ~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-  328 (511)
T TIGR00806       250 RMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-  328 (511)
T ss_pred             HHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-
Confidence            667888888999999888888877777777777766655544322111 111222334445566777788875444221 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          353 SNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      ..  ..+.+..++....++++...++.|...+.+.+.........+....-++.....+.-|...|+.++..-+
T Consensus       329 ~~--l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~  400 (511)
T TIGR00806       329 SK--LLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATA  400 (511)
T ss_pred             HH--HHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHH
Confidence            10  3333444455555666666678888888888888888888888888888888778789888887665544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.97  E-value=8.9e-28  Score=230.58  Aligned_cols=343  Identities=15%  Similarity=0.087  Sum_probs=227.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-----CCch-hHHHHHHHHHHHHHHhhhh---hHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIAIC  132 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~~~  132 (503)
                      |.+-++.|+|.+++|++..+...  .+..+++|+++||+     |||| .+.++.++.+++..+.++.   ++++.+++.
T Consensus        23 ~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~  100 (402)
T PRK11902         23 QAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGL  100 (402)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence            33347789999999999777665  59999999999999     8876 7888888888888887776   467888888


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHh
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      .++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||..|++.+++.++..+. .+
T Consensus       101 ~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~  179 (402)
T PRK11902        101 AVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TL  179 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HH
Confidence            88889888889999999999999999999999999999999999999999998875 59999999998877655543 33


Q ss_pred             ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH
Q 010692          212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN  291 (503)
Q Consensus       212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (503)
                      ..||+.+.    +++++.                     .                    .++..+++++++|+|.++..
T Consensus       180 ~~~e~~~~----~~~~~~---------------------~--------------------~~~~~~~~~~l~~~~~~~~~  214 (402)
T PRK11902        180 WAPEPEVP----ARPPRS---------------------L--------------------GEAVVGPLRDFFSRRGAWAL  214 (402)
T ss_pred             hcCCCccc----ccccch---------------------h--------------------HHHHHHHHHHHHhCcCHHHH
Confidence            44542211    000000                     0                    00012456778899988877


Q ss_pred             HHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH-Hhh-hhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVT-IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      ++..++..........+.+.++.+..|.++....+. ... .++.+++.++++++.||+++|     +.+........+.
T Consensus       215 l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~l~  289 (402)
T PRK11902        215 LLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQAVS  289 (402)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHH
Confidence            766555544333333344445666678776554332 232 345788999999999999987     4443333332222


Q ss_pred             HHHH---HHh-hhHHHHHHHHHH----HHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          370 CLTA---FCL-SSLYGFLALFTV----GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       370 ~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      .+..   ... ++.+.......+    .++..+........++.+..|    ++..++.+....+ +.+.++.+.|.+.|
T Consensus       290 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l-~~~~~~~~~G~l~~  364 (402)
T PRK11902        290 NLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASV-GRVYVGPTSGYLVE  364 (402)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            2111   122 233433333322    222233334444444444444    4445555444444 55545668999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHH
Q 010692          442 HVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       442 ~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      ..| |...|...+.+.+++.++
T Consensus       365 ~~G-~~~~f~~~~~~~~~~~~~  385 (402)
T PRK11902        365 AYG-WPGFYLMTVVIALPGLAL  385 (402)
T ss_pred             HhC-hHHHHHHHHHHHHHHHHH
Confidence            988 767777766665554333

>TIGR00889 2A0110 nucleoside transporter

Probab=99.97  E-value=2.5e-28  Score=234.28  Aligned_cols=350  Identities=11%  Similarity=0.016  Sum_probs=236.6

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCC-chhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      |.+.+.+.+++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+++.|++.
T Consensus        23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  102 (418)
T TIGR00889        23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN  102 (418)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            444344578899999999999999999999999999999999965 7788888999989998999999999999999999


Q ss_pred             Hhhhhhhhhchhhhhh--------ccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692          137 GVGEASFISLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL  208 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~  208 (503)
                      |++.+...+...++..        |......|.+.+|      .+|.++||.+++.+....+|+ +|++.+++.++..++
T Consensus       103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~  175 (418)
T TIGR00889       103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF  175 (418)
T ss_pred             HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH
Confidence            9987766666555432        2222234555554      478888899988884433455 455666655555543


Q ss_pred             HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhH
Q 010692          209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY  288 (503)
Q Consensus       209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (503)
                       .+..||.++.    ++++..                    ..+                    +....+.+.++|+|.+
T Consensus       176 -~~~~~e~~~~----~~~~~~--------------------~~~--------------------~~~~~~~~~~~k~~~~  210 (418)
T TIGR00889       176 -ALTLPDIPVA----KSTAKM--------------------SIK--------------------VMLGLDAFILFKNKRM  210 (418)
T ss_pred             -HhcCCCCCCC----cccccc--------------------CHH--------------------HHhhhhHHHHhcCCCe
Confidence             3445653211    000000                    000                    0000123457788888


Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccch--------hh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN--------AD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      +...+..++..........+.|.++++.+ .++        .. ....++..+..+++.+..+++.||+++|     +.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l  284 (418)
T TIGR00889       211 AIFFFFSMLLGAPLQITNIFGNGFLHEFG-RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVM  284 (418)
T ss_pred             eeHHHHHHHHHhHHHHHHHhHHHHHHHhc-ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHH
Confidence            77777666665555555566777776643 221        11 2344566678888899999999999998     666


Q ss_pred             HHHHHHHHHHHHHHHHhh-h---HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692          360 SAATFLGAISCLTAFCLS-S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL  435 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~  435 (503)
                      ..+.++..+......... +   .+..++..++.+.+.+...+....++.+..|++.|+++.|+.+...+.+|.+++|.+
T Consensus       285 ~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l  364 (418)
T TIGR00889       285 LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL  364 (418)
T ss_pred             HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            666665555443333322 1   233344455566666666667777888999999999999999744443388899999


Q ss_pred             HHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHH
Q 010692          436 VGVLQDHVNN-----WRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       436 ~g~l~~~~g~-----~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .|++.|..|+     |+..|.+.+++.+++.++..
T Consensus       365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~  399 (418)
T TIGR00889       365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM  399 (418)
T ss_pred             HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence            9999998653     77788877766665554443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.96  E-value=4.1e-28  Score=232.67  Aligned_cols=348  Identities=13%  Similarity=0.054  Sum_probs=233.1

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hh-----hHHHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SS-----FDFWSIAICRMLV  136 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~-----~~~~~l~~~r~l~  136 (503)
                      .+++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++.....   +.     +.+..+++.|++.
T Consensus        30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (396)
T TIGR00882        30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL  109 (396)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999999999887776665443321   11     2334456778889


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      |++.+...+....++.|..+  +++..++......++|.++||++++.+.+ .+||.+|++.+++.++..++.+...|+.
T Consensus       110 g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~  186 (396)
T TIGR00882       110 GFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA  186 (396)
T ss_pred             HHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            98888888888777777533  34567788888889999999999998875 4999999999988887776655544432


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      +++    ++.+..   .               +       .++++            ...++.++++|+|.++...+..+
T Consensus       187 ~~~----~~~~~~---~---------------~-------~~~~~------------~~~~~~~~~l~~~~~~~~~l~~~  225 (396)
T TIGR00882       187 PSS----ATVANA---L---------------G-------ANASA------------FSLKLALELFRQRKFWMFVLYVV  225 (396)
T ss_pred             chh----hhhhcc---c---------------c-------cccCC------------CCHHHHHHHHcCCcHHHHHHHHH
Confidence            110    000000   0               0       00000            00134567888888877666555


Q ss_pred             HHHHHhhhhhccccchhhhhcc---cchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYH---MSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT  372 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (503)
                      ...........+.|.|+.+...   .+... .....+..+...++.+..+++.||+++|     +.+..+..+..+....
T Consensus       226 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~~~~  300 (396)
T TIGR00882       226 GVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVRIIG  300 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHH
Confidence            5555555555567777766542   22222 2334455667777888999999999998     5555555444444444


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH-HHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      ....++.+......++.+.+..........+..+..+++.++++.+. .+....+ |.+++|.+.|++.|..| |+.+|.
T Consensus       301 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l-g~~~~~~l~G~l~~~~G-~~~~f~  378 (396)
T TIGR00882       301 SSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL-AMIFLSTLAGNMYDSIG-FQGAYL  378 (396)
T ss_pred             HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH-HHHHHHHhHHHHHHhcc-cHHHHH
Confidence            33445555555445555444433333344455566677888877766 4555566 88999999999999887 778888


Q ss_pred             HHHHHHHHHHHH
Q 010692          452 ALTSIFFLAAGI  463 (503)
Q Consensus       452 ~~~~~~~~~~~~  463 (503)
                      +.+++.++..+.
T Consensus       379 ~~~~~~~i~~~~  390 (396)
T TIGR00882       379 VLGCIVLLFTLI  390 (396)
T ss_pred             HHHHHHHHHHHH
Confidence            877776555443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.96  E-value=8.1e-28  Score=227.48  Aligned_cols=311  Identities=13%  Similarity=0.073  Sum_probs=227.7

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-----CCchh-HHHHHHHHHHHHHHhhhh---hHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAIC  132 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~  132 (503)
                      |.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+     ||||. ++.+.++.++...+.++.   .+++.+...
T Consensus        12 ~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~   89 (356)
T TIGR00901        12 PYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGL   89 (356)
T ss_pred             HHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHH
Confidence            56679999999999999755 555555 99999999998     89996 567788888877777776   566777888


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--------hHHHHHHHHHHHHH
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLP  204 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~  204 (503)
                      .++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..|        ||..|++.+++.++
T Consensus        90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~  169 (356)
T TIGR00901        90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILP  169 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHH
Confidence            8888998888899999999999999999999999999999999999999999988888        99999999987777


Q ss_pred             HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692          205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ  284 (503)
Q Consensus       205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (503)
                      ..+..++..||..+.  ++++ +.                         .                 .++..+.++++++
T Consensus       170 ~~~~~~~~~~e~~~~--~~~~-~~-------------------------~-----------------~~~~~~~~~~~~~  204 (356)
T TIGR00901       170 GLLVTLFLAKEPQED--ASVP-KP-------------------------L-----------------TQAVLKPIREFFQ  204 (356)
T ss_pred             HHHHHHHhccCCCcc--cccc-hh-------------------------H-----------------HHHHHHHHHHHHH
Confidence            665555444542110  0000 00                         0                 0001134556667


Q ss_pred             hhh---HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhh-hhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          285 EKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       285 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      +|.   ++...+..++..........+.|.|+++ .|.++... .+.... .+..+++.++++++.||+++|     +.+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l  278 (356)
T TIGR00901       205 RKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-----YAL  278 (356)
T ss_pred             hcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----HHH
Confidence            665   6666666666677777788899999988 77776554 233333 356778999999999999987     444


Q ss_pred             HHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692          360 SAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH  425 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  425 (503)
                      ..+.++..+........           ++.+......++.+++.+...+....+..+..|+++||+..|+.+...+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       279 LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            44444443333322221           2234445555566777778888999999999999999999999876554

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.96  E-value=2.4e-27  Score=231.02  Aligned_cols=330  Identities=15%  Similarity=0.116  Sum_probs=239.1

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCch-hHHHHHHHHHHHHHHhhhhhH------HHHHHHH
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAIC  132 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~  132 (503)
                      +.+++|+++.++|++.++..+..++..|+.|+++||    +|||| .++.+....+++.+++.+.++      ++.+++.
T Consensus        26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  105 (437)
T TIGR00792        26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYIT  105 (437)
T ss_pred             HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence            368899999999999999999999999999999998    67744 677888888888888776653      4667778


Q ss_pred             HHHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-------CcchhHHHHHHHHHHHHH
Q 010692          133 RMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILMLP  204 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-------~~~gwr~~f~~~~~~~~~  204 (503)
                      +++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.       +..+||+.+++.++++++
T Consensus       106 ~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~  185 (437)
T TIGR00792       106 YILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVV  185 (437)
T ss_pred             HHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHH
Confidence            89999999888888888999987 4688999999999999998877766655443       245899999999998887


Q ss_pred             HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692          205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ  284 (503)
Q Consensus       205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (503)
                      ..++.++..||.++..  +++++.                                +           .+..+.++.+++
T Consensus       186 ~~~~~~~~~~e~~~~~--~~~~~~--------------------------------~-----------~~~~~~~~~l~~  220 (437)
T TIGR00792       186 SLIICFFGTKERYSEI--PKNIEK--------------------------------K-----------LSLKQIFKALFK  220 (437)
T ss_pred             HHHHHHcCCEecCCCC--Cccccc--------------------------------C-----------CCHHHHHHHHhC
Confidence            7777666665532110  000000                                0           001245677889


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      +|.++...+..++..........+.+.|.+...+.+.....+..+..++.+++.++.+++.||+++|     +.+..+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~~~  295 (437)
T TIGR00792       221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGGIL  295 (437)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHH
Confidence            9999888777777766666666666666665555333333444556788889999999999999987     55555554


Q ss_pred             HHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692          365 LGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       365 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      +.++..+..... ++.+...+..++.+++.+...+...++..+..+       ++.+|.+.|+.+....+ |..+++.+.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~lg~~i~  374 (437)
T TIGR00792       296 LMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQALAGFLV  374 (437)
T ss_pred             HHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHHHHHHHH
Confidence            444443333332 334444555566666666666667777776654       45689999999988888 888899999


Q ss_pred             HHHHhhhh
Q 010692          437 GVLQDHVN  444 (503)
Q Consensus       437 g~l~~~~g  444 (503)
                      |++.+..|
T Consensus       375 g~ll~~~G  382 (437)
T TIGR00792       375 GLILGIIG  382 (437)
T ss_pred             HHHHHHcC
Confidence            99988755

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.96  E-value=1.8e-27  Score=228.68  Aligned_cols=374  Identities=12%  Similarity=0.063  Sum_probs=240.1

Q ss_pred             CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      ....++.+..|+|-+ ....|+.+.+.++.++..++.|+++|.||||++++.+.++..+|.++++.++|...++++..+.
T Consensus        63 ~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~  141 (599)
T PF06609_consen   63 PASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY  141 (599)
T ss_pred             cHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence            344447778999864 6889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK-PL  215 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~  215 (503)
                      |+|.|... .....++|..|.|.|+...++......+....++.++..+..+-+|||.|++..+...+..++.+++. |.
T Consensus       142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP  220 (599)
T PF06609_consen  142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP  220 (599)
T ss_pred             HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99988665 45666999999999998888777776666667888887777777999999999998777766655444 33


Q ss_pred             ccCCCCcccccccccccccc---------------cCcc--cCCCCCccccccchh-hhhhhhcccchhhhhhhh---hc
Q 010692          216 QLKGFAPAESGKAQVVASVS---------------EGSE--ASNLNDHVSEDISDQ-ASERSIKSIGESRFLNQL---SQ  274 (503)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~  274 (503)
                      +.+..+.++..++...++.+               -.++  ......+....+-.. ...--  --..-..++..   ++
T Consensus       221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~--~Lv~F~~wE~~~~~~~  298 (599)
T PF06609_consen  221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV--LLVAFVVWEWFGAPKD  298 (599)
T ss_pred             chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH--HHHHHHHhhhhccCCC
Confidence            21111111100000000000               0000  000000000000000 00000  00000000100   11


Q ss_pred             hHHHHHHHhhh-hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh----hHHHHHhhhhhhhhchhhhhhhhhccc
Q 010692          275 FSQDTKVLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA----DMMFGGVTIVCGIVGTISGGFILDQMG  349 (503)
Q Consensus       275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~  349 (503)
                      ..- ..+++|+ |.+...++..++....++....+.|......++.++.    ..........+..+|.++.+.+..+++
T Consensus       299 Pl~-P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir  377 (599)
T PF06609_consen  299 PLF-PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR  377 (599)
T ss_pred             CcC-CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence            111 2356776 5566666666677777777777888877777666542    123445556677778888889888876


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhc
Q 010692          350 ATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF  427 (503)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  427 (503)
                      +-+    ..++.+..+..+++..+..  .++....+.+.++.+++.+....+......-..|++.-|++.|+..++..+ 
T Consensus       378 ~~K----w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~-  452 (599)
T PF06609_consen  378 HIK----WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI-  452 (599)
T ss_pred             chh----HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH-
Confidence            542    3443444444433222222  234444556677777777776666676777778889999999999777776 


Q ss_pred             ccccchhhHHHHH
Q 010692          428 GDVPSSPLVGVLQ  440 (503)
Q Consensus       428 g~~~~~~~~g~l~  440 (503)
                      |+.++..++..+.
T Consensus       453 GGsIg~aIy~~I~  465 (599)
T PF06609_consen  453 GGSIGYAIYNAIF  465 (599)
T ss_pred             hhHHHHHHHHHHH
Confidence            7777766665543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=99.96  E-value=1.5e-29  Score=227.01  Aligned_cols=432  Identities=14%  Similarity=0.084  Sum_probs=277.2

Q ss_pred             hhcccccCCchhHHHHHHhhhcccCCCCCccccccc-----ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc
Q 010692           29 KSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPK-----RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF  103 (503)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr  103 (503)
                      .++....+.+..+..+.+.++....+.+.+.+- .+     .+.=+.++.-.+.+..+..+|.++||++.|+++||+|||
T Consensus        36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~-~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK  114 (538)
T KOG0252|consen   36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILG-YLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK  114 (538)
T ss_pred             hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHH-HHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence            344445555666677777776666666654441 11     111124556678999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhhhhh-------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH
Q 010692          104 RLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA  176 (503)
Q Consensus       104 ~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~  176 (503)
                      +++...+++..+++++++++.       -.+++...|++.|+|.|+-+|.+.++.+|....+.||...+.+.+..+.|..
T Consensus       115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil  194 (538)
T KOG0252|consen  115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL  194 (538)
T ss_pred             hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence            999999999999999888762       2678899999999999999999999999999999999999999888888888


Q ss_pred             HHHHHHHhhcC---------------cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccC
Q 010692          177 LGYVYGGVVGS---------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS  241 (503)
Q Consensus       177 ~g~~l~~~l~~---------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (503)
                      .|.+++-.+..               ..=||..+.+.+++++.....-+ .+||+.+.....++......++..++.+  
T Consensus       195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~--  271 (538)
T KOG0252|consen  195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLS--  271 (538)
T ss_pred             hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhccccccc--
Confidence            88877765531               12399999888776554443322 2266544321111000000000000000  


Q ss_pred             CCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch
Q 010692          242 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN  321 (503)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (503)
                             .++.++...    +...++..+..+.+.+.+... .-+++...+..+++.-.+++....+...++++..-.+.
T Consensus       272 -------~~~~~~~~~----~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~  339 (538)
T KOG0252|consen  272 -------VDIEAESTA----ESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPS  339 (538)
T ss_pred             -------cccchhhcc----ccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCC
Confidence                   011111100    000000001111111222221 33566667777888888888888887777764322221


Q ss_pred             h---------hHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHH
Q 010692          322 A---------DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS----LYGFLALFTV  388 (503)
Q Consensus       322 ~---------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  388 (503)
                      .         +..-..+.....++|..+...++|++||+     ...+.+.++..++.+.+....+    ....+++..+
T Consensus       340 ~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l  414 (538)
T KOG0252|consen  340 ANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSL  414 (538)
T ss_pred             cchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHH
Confidence            1         11122344456677999999999999998     5555555555555544433322    2344555555


Q ss_pred             HHHHHhhccc-hhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-----hhhhHHHHHHHHHHHHHHHHH
Q 010692          389 GELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAG  462 (503)
Q Consensus       389 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~  462 (503)
                      ..++....-. ....+.++.+|.+.|+++.|+....... |++++...++++.+     ..| .+..+++.+.+..++.+
T Consensus       415 ~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~-GAivg~~~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~  492 (538)
T KOG0252|consen  415 TFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKA-GAIVGAFGFLYLTDHNYPPNIG-VRNVFIILAGCMLLGIL  492 (538)
T ss_pred             HHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccc-hHHHHHHHhhHhhhccCCcccc-chHHHHHHHHHHHHhHh
Confidence            5555554333 3334455667779999999999777777 99999999999988     555 67888888888887777


Q ss_pred             HHHHHHHhccccccccccccccc
Q 010692          463 IWFVGIFLKSIDKFNEDGENQIS  485 (503)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~  485 (503)
                      +.++..  ++|++..|+++++..
T Consensus       493 ~T~l~p--Etk~~~leei~~e~~  513 (538)
T KOG0252|consen  493 FTLLIP--ETKGKSLEEISNEEE  513 (538)
T ss_pred             eeEEee--cccccCHHHhcChhh
Confidence            666332  458888777755443

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=99.96  E-value=4.2e-28  Score=210.93  Aligned_cols=381  Identities=14%  Similarity=0.124  Sum_probs=259.8

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV  138 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~  138 (503)
                      .+.|...+.+|.+..|..++......+..+++..+|.++|++|||+.+.+..+..++..++.+.++|+..+++.|.+.|.
T Consensus        99 ~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~  178 (528)
T KOG0253|consen   99 LILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGF  178 (528)
T ss_pred             HHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhc
Confidence            33355578899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692          139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK  218 (503)
Q Consensus       139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~  218 (503)
                      |.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+.-.....+||||.....+.+..+.+.. .+..||+++
T Consensus       179 g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ESpR  255 (528)
T KOG0253|consen  179 GVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYESPR  255 (528)
T ss_pred             cCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccCcc
Confidence            9998 888999999999999999877777 9999999999999999999999999999888665555554 444577766


Q ss_pred             CCCcccccc-cccccccccCcccCCC------------CCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh--
Q 010692          219 GFAPAESGK-AQVVASVSEGSEASNL------------NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL--  283 (503)
Q Consensus       219 ~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  283 (503)
                      ..-.+.++. ....-++..+.++.+-            .++++.++.+......++             ...+..+++  
T Consensus       256 f~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke-------------~rg~~~nLlsp  322 (528)
T KOG0253|consen  256 FYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKE-------------VRGGTTNLLSP  322 (528)
T ss_pred             hhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccc-------------cccchHhhcCh
Confidence            532222211 1111111111111110            011111111111111011             111222222  


Q ss_pred             --hhhhHHHHHHHHHHHHHHhhhhhc-----------------cccchhhhhc---ccchhhHHHHHhhhhhhhhchhhh
Q 010692          284 --QEKVYVVNVLGYIAYNFVIGAYSY-----------------WGPKAGYNIY---HMSNADMMFGGVTIVCGIVGTISG  341 (503)
Q Consensus       284 --~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  341 (503)
                        ++..+.... .++...+.+++...                 ..|.+++...   ..+.....=..+..+...+|.++.
T Consensus       323 ~lrkttlllw~-iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt  401 (528)
T KOG0253|consen  323 KLRKTTLLLWR-IWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLIT  401 (528)
T ss_pred             HHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHH
Confidence              222222111 12222233333222                 2233332211   011112211234567889999999


Q ss_pred             hhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHH
Q 010692          342 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST  421 (503)
Q Consensus       342 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  421 (503)
                      ++++||+|||     +.+....++..++.++.....+.....+..+..-++..+.+...+.+..|.+|...|+++.|.+.
T Consensus       402 ~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcS  476 (528)
T KOG0253|consen  402 GVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCS  476 (528)
T ss_pred             HHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhh
Confidence            9999999999     78888888777777777766666666677777778888889999999999999999999999998


Q ss_pred             HHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          422 VSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       422 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .+..+ |+++.|.+. ...+..- + .+..+.+.+++++.+..+
T Consensus       477 smaRI-ggI~~p~iA-~~~e~s~-s-l~i~vy~~~~ilagIavc  516 (528)
T KOG0253|consen  477 SMARI-GGIFSPVIA-MRAELST-S-LPIFVYGALFILAGIAVC  516 (528)
T ss_pred             hHHhh-hhhhhhHHH-HHhccce-e-ehHHHHHHHHHHHHHHhe
Confidence            88888 999999777 4444322 2 455556666666666655

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.96  E-value=2.3e-27  Score=230.50  Aligned_cols=392  Identities=13%  Similarity=0.038  Sum_probs=236.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~g~~~  142 (503)
                      .+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.+.++++++... ++++|+++|+|.|.
T Consensus        42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~  121 (489)
T PRK10207         42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGL  121 (489)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccc
Confidence            78899999999999999999999999999999999 99999999999999999999999877554 55899999999999


Q ss_pred             hhhchhhhhhccCCCC--CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          143 FISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      ..|...+++.|.+|++  +|++++++++.+.++|..+||.+++++.+++|||+.|++.++ +++..++.+...++..++.
T Consensus       122 ~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~  200 (489)
T PRK10207        122 FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDI  200 (489)
T ss_pred             ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhccc
Confidence            9999999999999877  457799999999999999999999999999999999999755 4444444444444332221


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh------h-hhhchHHHHHHHhhhhhHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL------N-QLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      .++.+++..+..   ....-...  -..-....................      . -.... ....+.+|+|.+....+
T Consensus       201 ~~~~~~~~~d~~---~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~~~l  274 (489)
T PRK10207        201 GSEPDHKPMSFS---KLLLVLLG--SVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVAFVL  274 (489)
T ss_pred             CCCCCccchhhh---hHHHHHHH--HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence            101000000000   00000000  000000000000000000000000      0 00000 00013455555544332


Q ss_pred             H--HHHHHHHhhhhhccccchhhhhc-----ccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch---hhHHHHHHHH
Q 010692          294 G--YIAYNFVIGAYSYWGPKAGYNIY-----HMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLLSAAT  363 (503)
Q Consensus       294 ~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~  363 (503)
                      .  ...+...+....+.++.+.++..     |.......+..+..+..++..++.+++.||+++|..   ...+.. .+.
T Consensus       275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~-~G~  353 (489)
T PRK10207        275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFT-LGM  353 (489)
T ss_pred             HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHH-HHH
Confidence            2  22333334444455666665322     222112223333444555667778899999988741   111122 222


Q ss_pred             HHHHHHHHHH-----HHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          364 FLGAISCLTA-----FCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       364 ~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      ++.....+..     ...     .+.+..+...++.+.+.....++....+.+..|++.+|.++|+.+...++ |+.++.
T Consensus       354 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i-g~~lg~  432 (489)
T PRK10207        354 FLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA-AFLLGG  432 (489)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            2222222111     111     23455666777888888889999999999999999999999999877777 777666


Q ss_pred             hhHHHHHh---------hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          434 PLVGVLQD---------HVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       434 ~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .+......         ..+.+...|...++..++..++.+
T Consensus       433 ~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~  473 (489)
T PRK10207        433 YVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA  473 (489)
T ss_pred             HHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            55544311         012244555555555444444443

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=99.96  E-value=2.7e-27  Score=234.98  Aligned_cols=392  Identities=14%  Similarity=0.113  Sum_probs=250.0

Q ss_pred             CCCCcchhhhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh
Q 010692           20 QPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS   99 (503)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr   99 (503)
                      ++.++.+|+..+++......+........    .........+  .+.+..+.....+..+++.+|..+|++++|+++||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~--~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~  144 (521)
T KOG0255|consen   71 DPANPLNWPSWKKWLLVIVICLDGWVYDY----GSSVYSIVSE--WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR  144 (521)
T ss_pred             CcCCccccccccccccccccccceeEecC----CCCcccccch--hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh
Confidence            66677777777776544443333333222    1111111101  35667788888999999999999999999999999


Q ss_pred             cCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH
Q 010692          100 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY  179 (503)
Q Consensus       100 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~  179 (503)
                      +|||+++++++++..++.++.++++|++.+++.|++.|++.+........++.|++++++|+.+..+ ......+..+++
T Consensus       145 ~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~  223 (521)
T KOG0255|consen  145 FGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLP  223 (521)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999 777778888888


Q ss_pred             HHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccccccccc-ccccCcccCCCCCccccccchhhhhh
Q 010692          180 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-SVSEGSEASNLNDHVSEDISDQASER  258 (503)
Q Consensus       180 ~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (503)
                      +.++++..  +||+.+++..+++++..+. +++.||++++.....+.+...+. +...+.+...  .+..+.........
T Consensus       224 ~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~--~~~~~~~~~~~~~~  298 (521)
T KOG0255|consen  224 AGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRK--LSVKELLRLELLLR  298 (521)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHHHHHHHHHHhhcCCC--CCcHHHHHHHHHhh
Confidence            88888887  8999999999998877766 55556776654333222111110 0001111000  00000010000000


Q ss_pred             hhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhch
Q 010692          259 SIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGT  338 (503)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (503)
                      +.+.        ........+.++++.|++....+...+..... ...++.-.+.....+.+.  .....+.+.....+.
T Consensus       299 ~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~y~gl~~~~~~lg~~~--~~~~~~~~~~~~p~~  367 (521)
T KOG0255|consen  299 PLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-SLVYYGLSLNVSGLGGNI--YLNFTLSGLVELPAY  367 (521)
T ss_pred             Hhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-hHHHHhhhhhhhhcCchH--HHHHHHHHHHHhhHH
Confidence            0000        00000022556666665444333322222221 222222222222233332  222233334667777


Q ss_pred             hhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh-HH--HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692          339 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-LY--GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL  415 (503)
Q Consensus       339 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (503)
                      ...+...|++|||     .....+..+..+.++....... ..  .......+..++.+.++...+....+.+|+..|+.
T Consensus       368 ~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~  442 (521)
T KOG0255|consen  368 FRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNT  442 (521)
T ss_pred             HHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            7778999999888     5666655555555544444332 22  34555555666666777777888899999999999


Q ss_pred             HHHHHHHHHhhcccccchhhHHHHH
Q 010692          416 SMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       416 ~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                      +.+.......+ |.+++|.+.-...
T Consensus       443 ~~~~~~~~~~~-~~i~ap~~~~~~~  466 (521)
T KOG0255|consen  443 AVGAISAAARL-GSILAPLFPLLLR  466 (521)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHh
Confidence            99999877777 8888886654433

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.96  E-value=2.2e-27  Score=208.03  Aligned_cols=357  Identities=13%  Similarity=0.039  Sum_probs=221.8

Q ss_pred             CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhh
Q 010692           70 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAP  149 (503)
Q Consensus        70 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~  149 (503)
                      .+..-.|.+.+.|+++..+.++.+|.++||+|||++++++++..++..++.++++||..+.+.|++.|+..| ......+
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rA  143 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRA  143 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence            345567999999999999999999999999999999999999999999999999999777778999999998 5567889


Q ss_pred             hhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC---cchhHHHHHH----HHHHHHHHHHHHHhccccccCCCCc
Q 010692          150 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWG----EAILMLPFAVLAFVIKPLQLKGFAP  222 (503)
Q Consensus       150 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f~~----~~~~~~~~~~~~~~~~p~~~~~~~~  222 (503)
                      +++|.+++|+|+++++.++.++++|.++||.+|+++..   ..| +++|..    ..++.........++.||+.+.+++
T Consensus       144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~  222 (451)
T KOG2615|consen  144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR  222 (451)
T ss_pred             HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence            99999999999999999999999999999999999987   222 122222    2222222122334455887655333


Q ss_pred             ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692          223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI  302 (503)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (503)
                      .+++...         .+....+  .+..+.+ ...+.             ...++....-.......+.+-.+.+...+
T Consensus       223 ~~~~~~~---------~~~~~~~--~~~~~~~-~~~~v-------------~~lrn~p~~~~i~~~~i~~l~~~ly~~l~  277 (451)
T KOG2615|consen  223 NDEHSTL---------QEAADDR--LALLKFA-RIFKV-------------AALRNPPLLDFISVLRIFGLHYFLYLELF  277 (451)
T ss_pred             cccccch---------hhhhhhh--hhhcchh-hhhhh-------------hhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence            2111100         0000000  0000000 00000             00000000000011222333345555555


Q ss_pred             hhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692          303 GAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF  382 (503)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (503)
                      ....++.+.+-.+.+++++.+..  -+....++.+.++.+.+..+..+........+.....++.-..++..........
T Consensus       278 s~~~~t~~~l~~~rfg~ss~~~G--~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l  355 (451)
T KOG2615|consen  278 SGLENTVLFLTHGRFGYSSMQQG--KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVL  355 (451)
T ss_pred             HHHHhhHHHhhcCccCCChhhhe--eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhh
Confidence            55566666565666777764431  1222334444555555555555443211133333333333333333333444445


Q ss_pred             HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      .....+..+......+.++.++....|+++||+++|+......+ +-++||.+.|.+..+...-+.++...+.+
T Consensus       356 ~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws~~~~~a~~~~~~L  428 (451)
T KOG2615|consen  356 YLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWSQGAQPAYIAWGAL  428 (451)
T ss_pred             hHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEecCCCceeeehHHH
Confidence            55556666666677778888888999999999999999888887 88999999988877654333444444333

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.95  E-value=1.1e-32  Score=269.43  Aligned_cols=383  Identities=19%  Similarity=0.234  Sum_probs=249.8

Q ss_pred             cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHhhhhhhhhchhh
Q 010692           73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAP  149 (503)
Q Consensus        73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~g~~~~~~~~~~  149 (503)
                      .+.+++.+...+|..+|++++|+++||+|||+.++++.++..+++++.++++   |++.+.++|+++|++.|...+....
T Consensus        46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~  125 (451)
T PF00083_consen   46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI  125 (451)
T ss_pred             HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4578999999999999999999999999999999999999999999999999   9999999999999999999999999


Q ss_pred             hhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc---hhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccc
Q 010692          150 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG  226 (503)
Q Consensus       150 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  226 (503)
                      ++.|..|+++|++..++.+.+..+|..++..++..+....   +||..+++.++++++..+.. ++.||++++...+++.
T Consensus       126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~  204 (451)
T PF00083_consen  126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRD  204 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccccc
Confidence            9999999999999999999999999999988876654433   49999999998887655544 5568888765443333


Q ss_pred             ccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhh-----HHHHHHHHHHHHHH
Q 010692          227 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFV  301 (503)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  301 (503)
                      ++..  +..++.++.+..++..++..++.++.++++              ..++++++++.     +....+..+.....
T Consensus       205 ~~A~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g  268 (451)
T PF00083_consen  205 EEAE--KVLRKLRGKEIEDEEIEEIKAEKKESQESK--------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSG  268 (451)
T ss_pred             cccc--cccccccccccccccccccccccccccccc--------------eeeeeccccccccccccccccccccccccc
Confidence            2111  111111111111111111111111111000              12233333322     22222222222333


Q ss_pred             hhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH----H-h
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF----C-L  376 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~  376 (503)
                      .+...++.|.++.+ .+.+.. .....+..+...++.+++.++.||+|||     ++++.+.....+..+...    . .
T Consensus       269 ~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~  341 (451)
T PF00083_consen  269 INFIFYYSPSIFEN-AGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGV  341 (451)
T ss_pred             cccccccccccccc-cccccc-cccccccccccccccccccccccccccc-----ccccccccccccccccccccccccc
Confidence            44556666766655 344433 3333455567778888888999999999     555555554444333331    1 1


Q ss_pred             hh----HHHHHHHHHHHHHHHhhccchhh-HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692          377 SS----LYGFLALFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL  451 (503)
Q Consensus       377 ~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~  451 (503)
                      +.    ....+....+.....+.+..+.. .+..|.+|++.|+++.|+.....++ +++++|.+...+.+..+.+ ..+.
T Consensus       342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~~  419 (451)
T PF00083_consen  342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVFL  419 (451)
T ss_pred             ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc-ccch
Confidence            12    12222333333333343444444 5668888889999999999888887 7788888888888776522 3445


Q ss_pred             HHHHHHHHHHHHHHHHHHhc-cccccccccccc
Q 010692          452 ALTSIFFLAAGIWFVGIFLK-SIDKFNEDGENQ  483 (503)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  483 (503)
                      +.+++.++..++.  ..++| +|+++.||+++.
T Consensus       420 i~~~~~~i~~i~~--~~~lpET~g~~l~ei~~~  450 (451)
T PF00083_consen  420 IFAGVCLIAIIFV--YFFLPETKGKTLEEIQEM  450 (451)
T ss_pred             hhHHHHHHHHhhe--eEEEeeCCCCCHHHHHhh
Confidence            5444443333322  22456 488888877653

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.95  E-value=3.4e-26  Score=222.44  Aligned_cols=390  Identities=12%  Similarity=0.037  Sum_probs=235.0

Q ss_pred             ccc--cCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           65 RGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        65 ~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      .++  +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|+|.|
T Consensus        38 ~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g  117 (475)
T TIGR00924        38 VQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSG  117 (475)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccc
Confidence            444  89999999999999999999999999999999 899999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCC---chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692          142 SFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK  218 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~  218 (503)
                      ...+...++++|++|+++   |++++++++.+.++|.++||++++++.+++|||+.|++.++..++.. +.++..++..+
T Consensus       118 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~  196 (475)
T TIGR00924       118 LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLR  196 (475)
T ss_pred             cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccc
Confidence            999999999999998764   88899999999999999999999999998899999999886554443 33333333221


Q ss_pred             CCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhh------------hhhhhchHHHHHHHhhhh
Q 010692          219 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF------------LNQLSQFSQDTKVLLQEK  286 (503)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~  286 (503)
                      +.++  +++....++.+.....................  ..+.......            .+...+...+..+-.|..
T Consensus       197 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (475)
T TIGR00924       197 DIGS--VPDPLSGQGKTYGKLLLALLAALALVFFCAWL--MHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMY  272 (475)
T ss_pred             cCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHH
Confidence            1111  01000000000000000000000000000000  0000000000            000000000000111222


Q ss_pred             hHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-----hhHHHHHhhhhhhhhchhhhhhhhhccccc---chhhHHH
Q 010692          287 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-----ADMMFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKL  358 (503)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~  358 (503)
                      .+..+.+...++...+....+.++.+.++..+.+.     ....+.++..+.-++..++..++..|+.||   .....++
T Consensus       273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~  352 (475)
T TIGR00924       273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF  352 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence            33333443444445555555555665554322221     122333444444444444444433344433   1111122


Q ss_pred             HHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692          359 LSAATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD  429 (503)
Q Consensus       359 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  429 (503)
                       ..+.++..+.+.....         ..+.+..+...++.+.+.....|....++.+..|++.||+.+|+......+ |.
T Consensus       353 -~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~-g~  430 (475)
T TIGR00924       353 -TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM-GS  430 (475)
T ss_pred             -HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HH
Confidence             3333333333322221         246677778888888888899999999999999999999999999877766 87


Q ss_pred             ccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692          430 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG  462 (503)
Q Consensus       430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  462 (503)
                      .+++.+.....+..+ +...|...+...++..+
T Consensus       431 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  462 (475)
T TIGR00924       431 LLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGV  462 (475)
T ss_pred             HHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHH
Confidence            877777776655433 44445555444443333

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PTZ00207 hypothetical protein; Provisional

Probab=99.95  E-value=2.3e-26  Score=222.78  Aligned_cols=401  Identities=11%  Similarity=-0.018  Sum_probs=260.9

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh------hHHHHHHHH
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAIC  132 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~  132 (503)
                      .+.+++++++|+|.++++++.++. ..+..++++.|++.||+|+|+++.++.++++++.++++++      ++++.+++.
T Consensus        48 v~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~  126 (591)
T PTZ00207         48 LISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY  126 (591)
T ss_pred             HHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence            334677999999999999998874 4456788889999999999999999999999999999998      689999999


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHH-HHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      |++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++.  .+|+..|++.+++.++..++.+.
T Consensus       127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~  203 (591)
T PTZ00207        127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIV  203 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999998989999999997 56999999999999999975 555555554  36999999999998888887777


Q ss_pred             ccccccCCC---Cc---cccccccc---------cccc--c---------------------------------------
Q 010692          212 IKPLQLKGF---AP---AESGKAQV---------VASV--S---------------------------------------  235 (503)
Q Consensus       212 ~~p~~~~~~---~~---~~~~~~~~---------~~~~--~---------------------------------------  235 (503)
                      +.++.+...   ++   +++++...         ++..  .                                       
T Consensus       204 ~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~  283 (591)
T PTZ00207        204 FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTV  283 (591)
T ss_pred             heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            763322111   00   11111000         0000  0                                       


Q ss_pred             --------------cCcccCCCC---Cc-cccccchhhhhhhhcccc-hhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          236 --------------EGSEASNLN---DH-VSEDISDQASERSIKSIG-ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       236 --------------~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                                    ...+....+   +. ..+..+...+....+... .............++.+.+++..+|.+...++
T Consensus       284 ~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~  363 (591)
T PTZ00207        284 IVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF  363 (591)
T ss_pred             HHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH
Confidence                          000000000   00 000000000000000000 00000000111126778888999999999888


Q ss_pred             HHHHHhhhhhccccchhhhhcccc-hh--hHHHHHhhhhhhhhchhhhhhhhhcccccc----hhhHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMS-NA--DMMFGGVTIVCGIVGTISGGFILDQMGATI----SNAFKLLSAATFLGAIS  369 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~~~~~~~  369 (503)
                      +.......+...+.++.+...|.+ ..  ...+.++.++++.+|++..|.+.....+|.    ..+...+....++.++.
T Consensus       364 cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~  443 (591)
T PTZ00207        364 CCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITM  443 (591)
T ss_pred             HhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHH
Confidence            888887777888888887764542 22  222567889999999999999873333322    11112233333322222


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccc-hhhHHHHHhhhh----
Q 010692          370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN----  444 (503)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~~g----  444 (503)
                      ++++...+ ...+.+..++.+++.|..++.....+.+.+. ++-|+-+-+.....-+ |..+- -.+.|.++|.-.    
T Consensus       444 lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pi-gs~~~n~~l~G~~Yd~ea~k~~  520 (591)
T PTZ00207        444 LTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVL-SAIFLNRLLYGEWYTQQADKLG  520 (591)
T ss_pred             HHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHH-HHHHHHHHHHHHHHHHHHhhCC
Confidence            33322222 2466777888889999999988888889888 8888887777554444 55443 457788887532    


Q ss_pred             h--------HHHHHHHHHHHHHHHHHHHHH
Q 010692          445 N--------WRKTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       445 ~--------~~~~~~~~~~~~~~~~~~~~~  466 (503)
                      .        ++.+|++++++.+.+.+....
T Consensus       521 ~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~  550 (591)
T PTZ00207        521 QDVCTERVCVVMPLAFLLGLSFLAFITSTY  550 (591)
T ss_pred             CCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence            1        467788888777777766543

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.94  E-value=6e-25  Score=210.35  Aligned_cols=359  Identities=11%  Similarity=-0.051  Sum_probs=238.6

Q ss_pred             HHHHHhhhcccCCCCCcccccccccccCCCccchhhH--HHHHHHHHHHHHhHHHH-hhhhcCCchhHHHHHHHH-HHHH
Q 010692           42 EAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVL--SSAFMVGLLVASPIFAS-LAKSHNPFRLIGVGLSVW-TFAT  117 (503)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~l~~~~~~~-~~~~  117 (503)
                      ..+..+...+...+..    |.+.+|.|.+.+++|++  .+.+.+...+.+++++. ..||+||||..++.+.+. ++..
T Consensus         9 ly~~~g~~~~~~~p~l----p~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~   84 (390)
T TIGR02718         9 LYLSQGIPIGLAMDAL----PTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL   84 (390)
T ss_pred             HHHHHHhHHHHHHHHH----HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence            3444444333444444    44468899999999997  46778888888888854 799999999865555332 2112


Q ss_pred             HHhh---hhhH-HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHH
Q 010692          118 AGCG---SSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY  193 (503)
Q Consensus       118 ~~~~---~~~~-~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~  193 (503)
                      ...+   ...+ ...++..-++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+.+|||.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~  164 (390)
T TIGR02718        85 ASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRP  164 (390)
T ss_pred             HHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            2222   2222 33444455556667777778888888899888888988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692          194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS  273 (503)
Q Consensus       194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (503)
                      .|++.+++.++..+..++..|+.+++   +++++.                                             
T Consensus       165 ~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~~---------------------------------------------  196 (390)
T TIGR02718       165 AFLLVACVPLASLVCVLWLKDRAVAS---PEAPLA---------------------------------------------  196 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCcCc---cccchh---------------------------------------------
Confidence            99999988877666655554331100   000000                                             


Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHH-HHhhh-hhhhhchhhhhhhhhccccc
Q 010692          274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTI-VCGIVGTISGGFILDQMGAT  351 (503)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~g~l~d~~~~~  351 (503)
                       ...++++++|+|.++......++..........+.+.|+.+ .|.++..... ..... ...+++.++.|++.||+++|
T Consensus       197 -~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~  274 (390)
T TIGR02718       197 -RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW  274 (390)
T ss_pred             -hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence             01345677888888877776777766667777788888887 5777655433 23333 45667788999999999987


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-CCchhHHHHHHHHH
Q 010692          352 ISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSI  424 (503)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~  424 (503)
                           +.+..+..+.....+.....      .+.........+.++..+...+.......+..++ +.+++.+++.+...
T Consensus       275 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  349 (390)
T TIGR02718       275 -----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTR  349 (390)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence                 55544443332222211111      1112222222333344555666666676777776 88999999999888


Q ss_pred             hhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 010692          425 HIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA  461 (503)
Q Consensus       425 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  461 (503)
                      +. |..++|.+.|++.|..| +...|...+++.+++.
T Consensus       350 ~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~  384 (390)
T TIGR02718       350 DL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAI  384 (390)
T ss_pred             HH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHH
Confidence            88 99999999999999887 7677776665554443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.94  E-value=1.1e-24  Score=213.21  Aligned_cols=143  Identities=18%  Similarity=0.147  Sum_probs=124.8

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~~~  142 (503)
                      .+++|++.++.+++.+.+........+++|+++|| +|||++++++.++.+++..++++++ +.+.++++|+++|+|.|.
T Consensus        49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~  128 (500)
T PRK09584         49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGL  128 (500)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhc
Confidence            68899999999999888887777777899999999 5999999999999999999998874 566777899999999999


Q ss_pred             hhhchhhhhhccCCCCC--chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Q 010692          143 FISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV  207 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~  207 (503)
                      ..+...+++.|++|+++  |..++++++.+.++|..+||.+++++.+++|||+.|++.++..++..+
T Consensus       129 ~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i  195 (500)
T PRK09584        129 FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVV  195 (500)
T ss_pred             ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence            99999999999998654  456889999999999999999999999999999999998765444443

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=1.6e-23  Score=202.41  Aligned_cols=376  Identities=20%  Similarity=0.313  Sum_probs=284.2

Q ss_pred             hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692           40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG  119 (503)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~  119 (503)
                      ++..+...+   .. ......+..+++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|.+++++++++
T Consensus       103 ~~~~~~q~l---~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll  178 (735)
T KOG3626|consen  103 SLAAFAQGL---YV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLL  178 (735)
T ss_pred             HHHHHHHHh---hh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHH
Confidence            444444444   33 44555558889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhh--------------------h-------------------------------HHH-HHHHHHHHHHhhhhhhhhch
Q 010692          120 CGSS--------------------F-------------------------------DFW-SIAICRMLVGVGEASFISLA  147 (503)
Q Consensus       120 ~~~~--------------------~-------------------------------~~~-~l~~~r~l~G~g~~~~~~~~  147 (503)
                      +++-                    +                               .++ .++++.++.|+|....++.+
T Consensus       179 ~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlG  258 (735)
T KOG3626|consen  179 FALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLG  258 (735)
T ss_pred             HhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCC
Confidence            8761                    0                               033 56679999999999999999


Q ss_pred             hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc------------------c-hhHHHHHHHHHHHHHHHHH
Q 010692          148 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------------L-NWRYAFWGEAILMLPFAVL  208 (503)
Q Consensus       148 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------------~-gwr~~f~~~~~~~~~~~~~  208 (503)
                      .+|+-|...+++-...+|+......+|.++|.++|+++.+.                  . -|+.-|++.+.+.++..+.
T Consensus       259 isYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p  338 (735)
T KOG3626|consen  259 ISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP  338 (735)
T ss_pred             CccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987632                  1 3888888999888888877


Q ss_pred             HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhH
Q 010692          209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY  288 (503)
Q Consensus       209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (503)
                      .++++.+.++...+.+.++..                    ..+++..    ..+......+..+++.+..+++++||.+
T Consensus       339 ~f~fPk~lp~~~~~~~~~~~~--------------------~~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if  394 (735)
T KOG3626|consen  339 LFFFPKELPKSQKRKRARDLH--------------------VLKTESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIF  394 (735)
T ss_pred             HHhCcccCccccccchhhhhc--------------------ccccccc----cccCCcchhhhHHHHHHHHHHHhcCchH
Confidence            776643322211110000000                    0000000    0111111224557778889999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH--HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG  366 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~  366 (503)
                      ...+++..+....+.++.+|+|.|++++++.++..+  ..+.+...+..+|.+++|++.+|+.-+.+...++.++..++.
T Consensus       395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~  474 (735)
T KOG3626|consen  395 MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS  474 (735)
T ss_pred             HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999997554  333455566788999999999999877555445555555555


Q ss_pred             HHHHHHHHH-----------------------------------------------------------------------
Q 010692          367 AISCLTAFC-----------------------------------------------------------------------  375 (503)
Q Consensus       367 ~~~~~~~~~-----------------------------------------------------------------------  375 (503)
                      .++....++                                                                       
T Consensus       475 l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~  554 (735)
T KOG3626|consen  475 LLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGN  554 (735)
T ss_pred             HHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCc
Confidence            555333322                                                                       


Q ss_pred             --------hh--------------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhc
Q 010692          376 --------LS--------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF  427 (503)
Q Consensus       376 --------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  427 (503)
                              ..                    ....+++.+++..+..+....+.+.++.+.+++++|..++|+..+..+++
T Consensus       555 ~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irll  634 (735)
T KOG3626|consen  555 TIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLL  634 (735)
T ss_pred             eeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHH
Confidence                    00                    12334555555556666777888889999999999999999999999999


Q ss_pred             ccccchhhHHHHHhhh
Q 010692          428 GDVPSSPLVGVLQDHV  443 (503)
Q Consensus       428 g~~~~~~~~g~l~~~~  443 (503)
                      |.+.+|+++|+++|..
T Consensus       635 g~IPsPIifG~~ID~t  650 (735)
T KOG3626|consen  635 GFIPSPIIFGAVIDTT  650 (735)
T ss_pred             hcCCchHhhhhhHhhH
Confidence            9999999999999965

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.92  E-value=4e-22  Score=191.06  Aligned_cols=350  Identities=15%  Similarity=0.130  Sum_probs=266.1

Q ss_pred             cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH-HHHHHHHHHHHHHhhhh-h-HHHHHHHHHHHHHhhhhhhhhchhh
Q 010692           73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAP  149 (503)
Q Consensus        73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~g~~~~~~~~~~  149 (503)
                      +..++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+. + +++...+.-++.-++.+...+...+
T Consensus        70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna  149 (477)
T PF11700_consen   70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA  149 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3457888999999999999999999999877654 44555555666666664 3 4444445555556777888888999


Q ss_pred             hhhccCCCCCc--------------------------hhHHHHHHhHHhHHHHHHHHHHHhhcC--------cchhHHHH
Q 010692          150 FIDDNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAF  195 (503)
Q Consensus       150 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~--------~~gwr~~f  195 (503)
                      ++.|..+++++                          ++..+.-.....+|.++..++.-.+..        ..+-|..+
T Consensus       150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~  229 (477)
T PF11700_consen  150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF  229 (477)
T ss_pred             HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence            99999999888                          899998888888888887776654421        23468889


Q ss_pred             HHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhch
Q 010692          196 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF  275 (503)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (503)
                      .+.++--++..+..++..|+.++....++..+                                       .....+++.
T Consensus       230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~g~~~l  270 (477)
T PF11700_consen  230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---------------------------------------YLRFGFKRL  270 (477)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---------------------------------------HHHHHHHHH
Confidence            99998888888888888776443211111110                                       011344555


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchh
Q 010692          276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN  354 (503)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~  354 (503)
                      .+.++++.|.|.....+++++++.-+...+......|..+..+++..+. .+..+..+.+++|.++.+++.||+|.|.. 
T Consensus       271 ~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~-  349 (477)
T PF11700_consen  271 WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK-  349 (477)
T ss_pred             HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-
Confidence            5777888888999999999999999999999999999999999997766 45567789999999999999999998843 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          355 AFKLLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                        +.+....+...+..+....        ..+.+.+.+..++.|.+.+..++..-++..+..|+++.+...|++......
T Consensus       350 --~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~  427 (477)
T PF11700_consen  350 --RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA  427 (477)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence              2333333333222222222        456677777888888999999999999999999999999999999988888


Q ss_pred             cccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          427 FGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       427 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                       .+++||.+.|.+.+.+|+.+.++....++++++.++..
T Consensus       428 -ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~  465 (477)
T PF11700_consen  428 -SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF  465 (477)
T ss_pred             -HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence             88899999999999999888998888888777776665

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK09669 putative symporter YagG; Provisional

Probab=99.92  E-value=6.8e-23  Score=199.28  Aligned_cols=326  Identities=13%  Similarity=0.063  Sum_probs=219.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCc-hhHHHHHHHHHHHHHHhhhhh------HHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSF------DFWSIAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~------~~~~l~~~r  133 (503)
                      .+++|++..++|.+.++..+..++..|+.|+++||    +||| +.++.+.+..+++.++....+      .++.+++..
T Consensus        37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~  116 (444)
T PRK09669         37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY  116 (444)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence            68899999999999999999999999999999998    7774 556677777777776554443      245666677


Q ss_pred             HHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-------cchhHHHHHHHHHHHHHH
Q 010692          134 MLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPF  205 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~  205 (503)
                      ++.+++.........++.+|+. ++++|++..++...+..+|..+++.+...+..       ..+|+..+.+.++++++.
T Consensus       117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~  196 (444)
T PRK09669        117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL  196 (444)
T ss_pred             HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            7777777777777889999998 55789998888888888888877765443321       347998998888887777


Q ss_pred             HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692          206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE  285 (503)
Q Consensus       206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (503)
                      .+..++..+|..+.    ++++.                                            .+..++++.++||
T Consensus       197 ~~~~~~~~~e~~~~----~~~~~--------------------------------------------~~~~~~~~~~~~n  228 (444)
T PRK09669        197 FFCCFFMTKERYTP----EVDNS--------------------------------------------SSVWKDLKLLLGN  228 (444)
T ss_pred             HHHHhCCeEEecCC----CCcCC--------------------------------------------CCHHHHHHHHhCC
Confidence            66665554442110    00000                                            0112557788899


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      |.++..++..++............+.|.+...+.......+.....+..+++.++.+++.||+++|     +....+...
T Consensus       229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~~~~  303 (444)
T PRK09669        229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWTIVA  303 (444)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHH
Confidence            998887776665545444333333444443333222222333444566778888999999999987     444444433


Q ss_pred             HHHHHH-HHHH-hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692          366 GAISCL-TAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       366 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      ..+..+ .... .++.+..++..++.+++.+...+...+++.|.++       .+..|...|..+....+ |..+++.+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~alg~~i~  382 (444)
T PRK09669        304 FVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GLAIGGAVV  382 (444)
T ss_pred             HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HHHHHHHHH
Confidence            332222 2222 2345555555666777777777777777777664       23456778888777777 888999999


Q ss_pred             HHHHhhhh
Q 010692          437 GVLQDHVN  444 (503)
Q Consensus       437 g~l~~~~g  444 (503)
                      |.+.+..|
T Consensus       383 g~ll~~~G  390 (444)
T PRK09669        383 GWILAWVD  390 (444)
T ss_pred             HHHHHHcC
Confidence            99988765

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.91  E-value=1.4e-24  Score=182.38  Aligned_cols=366  Identities=10%  Similarity=-0.026  Sum_probs=240.8

Q ss_pred             hcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHH
Q 010692           30 SQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGV  108 (503)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~  108 (503)
                      .+|...+..+|+..|-..+   ..... ..+-.+.+.|.+++.++..++.++|+....+.+.++|++.|| +|-|..-++
T Consensus        40 ~hr~m~lv~mc~lgfgsyf---cyd~p-~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii  115 (459)
T KOG4686|consen   40 GHRFMALVFMCLLGFGSYF---CYDAP-GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII  115 (459)
T ss_pred             hhHHHHHHHHHHhccccee---ecCCc-hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence            3455555555665555544   22222 222255678889999999999999999999999999999996 588886666


Q ss_pred             HHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692          109 GLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV  185 (503)
Q Consensus       109 ~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l  185 (503)
                      -+....+|.++++   ..+.+|.+.++|++.|+|.-...++-+.+...||..|+.+.++|+.....-+|..+-..+.+++
T Consensus       116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l  195 (459)
T KOG4686|consen  116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL  195 (459)
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence            6666667777765   4689999999999999999888899999999999999999999999999999998877777766


Q ss_pred             cCcchh------H---HHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhh
Q 010692          186 GSHLNW------R---YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQAS  256 (503)
Q Consensus       186 ~~~~gw------r---~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (503)
                      .+..+-      +   ...+..+.......+.+....-     . .++++++..+.+...                   .
T Consensus       196 y~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg-----~-~D~rAerilh~e~g~-------------------~  250 (459)
T KOG4686|consen  196 YDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG-----L-SDDRAERILHLEEGF-------------------L  250 (459)
T ss_pred             HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh-----h-hhhHHHHHHhhhcCc-------------------c
Confidence            543221      0   1111111111111111111110     0 011111100000000                   0


Q ss_pred             hhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhh
Q 010692          257 ERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI  335 (503)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  335 (503)
                      .+..+-              .+.+ - -.|.+|.+.+.++++..+.+-+....|.++++.+|+++.++ .+.+.....+.
T Consensus       251 Ge~pkL--------------tdv~-~-f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isa  314 (459)
T KOG4686|consen  251 GEEPKL--------------TDVN-T-FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISA  314 (459)
T ss_pred             cCCccc--------------cccc-c-cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhh
Confidence            000000              0000 0 24778888888999999999999999999999999998665 44556666777


Q ss_pred             hchhhhhhhhhcccccchhhHHHHHHHHHHHH-HH-HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc
Q 010692          336 VGTISGGFILDQMGATISNAFKLLSAATFLGA-IS-CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR  413 (503)
Q Consensus       336 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (503)
                      +..++.|.++||.|++     .+.+.+..+.. .. ..+.+..-+++..+.+   .|.............+...+|+++.
T Consensus       315 v~spvfg~i~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~---lGLsysllAcslWP~va~~vpE~qL  386 (459)
T KOG4686|consen  315 VLSPVFGAISDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPYTSMTF---LGLSYSLLACSLWPCVASLVPEEQL  386 (459)
T ss_pred             hhhhhHHHhHhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHHHHHHH---HhhhHHHHHHHHhhhhhhhCCHHHh
Confidence            8889999999999998     33333333222 22 2222222344443333   3333333223344456667788999


Q ss_pred             hhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692          414 ALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT  449 (503)
Q Consensus       414 ~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~  449 (503)
                      |++.|.++...++ |-.+.|++.|.+.|.-|+|...
T Consensus       387 GTaygf~qsIqNL-gla~i~Iiag~i~d~~g~y~~l  421 (459)
T KOG4686|consen  387 GTAYGFIQSIQNL-GLAFIPIIAGFIADGDGSYDNL  421 (459)
T ss_pred             cchHHHHHHHHhh-hhhHHhhhhheeecCCCchhhH
Confidence            9999999999999 9999999999999987766444

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.91  E-value=4e-22  Score=194.94  Aligned_cols=331  Identities=8%  Similarity=-0.018  Sum_probs=219.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCC-chhHHHHHHHHHHHHHHhhhhh------HHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSF------DFWSIAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~l~~~r  133 (503)
                      .+.+|++..++|.+..+..+.-++..|+.|+++|    |+|| |+.++++.+..+++..+....+      .+..+++.-
T Consensus        34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~  113 (473)
T PRK10429         34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTY  113 (473)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence            5678999999999999999999999999999999    6698 5667778888777766554322      244555666


Q ss_pred             HHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhh----c---CcchhHHHHHHHHHHHHHH
Q 010692          134 MLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVV----G---SHLNWRYAFWGEAILMLPF  205 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l----~---~~~gwr~~f~~~~~~~~~~  205 (503)
                      ++.+++.....+...+++.|.. ++++|.+..++-..+.++|..+.+.+...+    .   +..+|+....+.+++.++.
T Consensus       114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~  193 (473)
T PRK10429        114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS  193 (473)
T ss_pred             HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            7778888888888999999998 588999999987777777766665544332    1   1236888887877776666


Q ss_pred             HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692          206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE  285 (503)
Q Consensus       206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (503)
                      .+..++..||..+.   ++.++..                                        +...+..+.++.+++|
T Consensus       194 ~~~~~~~~~e~~~~---~~~~~~~----------------------------------------~~~~~~~~~~~~~~~n  230 (473)
T PRK10429        194 TIITLRNVHEVYSS---DNQVSAE----------------------------------------GSHLTLKDIVALIYKN  230 (473)
T ss_pred             HHHHHcCceecCCc---ccccccc----------------------------------------ccCCCHHHHHHHHhcC
Confidence            66666555552211   0000000                                        0000112445667789


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      |.++..++..++..........+.+.|.+...+.......+.....+..+++.++.+++.||+|+|     +.+..+..+
T Consensus       231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~~~~  305 (473)
T PRK10429        231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGASIF  305 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHH
Confidence            888887777776666666666666666655444332222333445577788889999999999998     555444443


Q ss_pred             HHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccch
Q 010692          366 GAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       366 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      .++..+....     .++.+..++...+.+.+.+...+...++..|.++       .+..|...|.......+ |..+++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-~~al~~  384 (473)
T PRK10429        306 PVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-GSAFAA  384 (473)
T ss_pred             HHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-HHHHHH
Confidence            3322222211     2234444444555556666666666777777654       24456688888777777 888899


Q ss_pred             hhHHHHHhhhh
Q 010692          434 PLVGVLQDHVN  444 (503)
Q Consensus       434 ~~~g~l~~~~g  444 (503)
                      .+.|++.+..|
T Consensus       385 ~i~g~~l~~~G  395 (473)
T PRK10429        385 FFIGVVLGLIG  395 (473)
T ss_pred             HHHHHHHHHcC
Confidence            99999987665

>TIGR00788 fbt folate/biopterin transporter

Probab=99.91  E-value=6.3e-23  Score=199.06  Aligned_cols=372  Identities=13%  Similarity=0.014  Sum_probs=235.2

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-----CchhHHHHHHHHH-HHHHHhhhhhHHHHHH-HHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLIGVGLSVWT-FATAGCGSSFDFWSIA-ICRM  134 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~  134 (503)
                      +-+.+++|++.++++...+...+...+-.+ +|+++||++     ||+.++++.++.+ ++....+..++..... +..+
T Consensus        50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~  128 (468)
T TIGR00788        50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIF  128 (468)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence            334778999999999999999999999666 999999998     7778888877763 4444444445544444 4889


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhH---HHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAW---LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      +.+++.+...++..+++.|..+ +++...   .++.....++|.++|+.+++.+.+.++||..|++.+++.++..+ ..+
T Consensus       129 l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~  206 (468)
T TIGR00788       129 LAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSN  206 (468)
T ss_pred             HHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHH
Confidence            9999999999999999999998 545443   33444445689999999999999989999999999888776633 344


Q ss_pred             ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH
Q 010692          212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN  291 (503)
Q Consensus       212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (503)
                      +.||.+....++.+++ .                  .... ....         .......++..++.+..+++|.++..
T Consensus       207 ~~~E~~~~~~~~~~~~-~------------------~~~~-~~~~---------~~~~~~~~~~~~~l~~~l~~~~i~~~  257 (468)
T TIGR00788       207 LSKERRAFVRPRIGTY-L------------------EMNM-ALLT---------LGVLANVKVQILGLRGAIQLLEIAKP  257 (468)
T ss_pred             hccccccccccccccc-c------------------hhhh-hhhh---------hhHHHHHHHHHHHHHHHHhcHHHHHH
Confidence            4455321000000000 0                  0000 0000         00000111112345556778888876


Q ss_pred             HHHHHH-HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          292 VLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       292 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      .+..++ +.........+ -.+..+..|.++... .......++.+++..+.+++.+|++.|     +.+..+.++....
T Consensus       258 l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~  331 (468)
T TIGR00788       258 LIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLS  331 (468)
T ss_pred             HHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHH
Confidence            554444 33222222111 113334567776544 333555677778888888887777766     5665555555443


Q ss_pred             HHHHH-H---------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          370 CLTAF-C---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       370 ~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      .+... .         .++.+.......+.++..+..+.+...++.+..|++.+|+..++.+...++ |..+++.++|.+
T Consensus       332 ~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~~~gg~l  410 (468)
T TIGR00788       332 SLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL-GSSVSGFLGVLL  410 (468)
T ss_pred             HhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            32221 0         022223344455566677777888899999999999999999999988888 899999999999


Q ss_pred             Hhhhh----hHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692          440 QDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKS  472 (503)
Q Consensus       440 ~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (503)
                      .+..|    +++.-+....+..+...+...+...+|+
T Consensus       411 ~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~  447 (468)
T TIGR00788       411 METIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR  447 (468)
T ss_pred             HHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence            98776    2434444443443333333333335555

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.91  E-value=4.9e-22  Score=187.03  Aligned_cols=330  Identities=18%  Similarity=0.124  Sum_probs=238.1

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      +..-++.|.|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........++++.+++.-++..+..
T Consensus        26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~  105 (400)
T PF03825_consen   26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF  105 (400)
T ss_pred             HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            4445888999999999999999999999999999999986 577888888888887777788889999988888888888


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH-HHhhcCcch---hHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      ....|...++..+...  ++++-.|-.....++|.+++... ++.+....+   ....+++.+...++..... +.+|+.
T Consensus       106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~  182 (400)
T PF03825_consen  106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKT  182 (400)
T ss_pred             ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCC
Confidence            8888888888888765  34455666777777777777543 223332222   2345666665544444333 334553


Q ss_pred             cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692          217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI  296 (503)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (503)
                      +.+++.+++.+.                                             ....+..+++|+|++....+..+
T Consensus       183 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~llk~~~~~~Fll~~~  217 (400)
T PF03825_consen  183 PPKRSAKESVKK---------------------------------------------LLGLDALKLLKNPRFLVFLLAAF  217 (400)
T ss_pred             ccccccCCCccc---------------------------------------------ccchHHHHHhcCccHHHHHHHHH
Confidence            311111111000                                             00123457899999998888888


Q ss_pred             HHHHHhhhhhccccchhhhhcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692          297 AYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC  375 (503)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (503)
                      +.......+..+.+.|+++.++.+... ....++..++.++.-+..+++.+|++.+     +++..+.+..++-..+...
T Consensus       218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~  292 (400)
T PF03825_consen  218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAY  292 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHH
Confidence            888888888899999999977655333 2333556677888888899999999987     7777777777777666655


Q ss_pred             h-hhHHHHHHHHH----HHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          376 L-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       376 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      . ++.+...+...    +-+..++..+.....++.+..|++.|+++.++.+.....+|..+|..++|++.|..|
T Consensus       293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g  366 (400)
T PF03825_consen  293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG  366 (400)
T ss_pred             hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence            5 34443333333    356777777778888999999999999999999887766699999999999999876

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.91  E-value=6.2e-26  Score=220.27  Aligned_cols=374  Identities=22%  Similarity=0.369  Sum_probs=3.0

Q ss_pred             cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------
Q 010692           52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------  123 (503)
Q Consensus        52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------  123 (503)
                      ..+......++.+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++|++++++-        
T Consensus        17 ~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~   96 (539)
T PF03137_consen   17 MVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYS   96 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCc
Confidence            444455556688999999999999999999999999999999999999888889999999999999987651        


Q ss_pred             ------------------------------------------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCch
Q 010692          124 ------------------------------------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT  161 (503)
Q Consensus       124 ------------------------------------------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~  161 (503)
                                                                .-++.++++.++.|+|.+..++.+.+|+-|..++++-+
T Consensus        97 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~sp  176 (539)
T PF03137_consen   97 YEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSP  176 (539)
T ss_dssp             -------------------------------------------------------SSS----------------------
T ss_pred             cccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCc
Confidence                                                      01456788999999999999999999999999999999


Q ss_pred             hHHHHHHhHHhHHHHHHHHHHHhhcCc---------------------ch-hHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          162 AWLSMFYMCIPTGVALGYVYGGVVGSH---------------------LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       162 ~~~~~~~~~~~~G~~~g~~l~~~l~~~---------------------~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      ..+|+......+|.++|.++++.+.+.                     .| |..-|++.+++.++.++..+.+ |+..+.
T Consensus       177 lYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~  255 (539)
T PF03137_consen  177 LYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPG  255 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCC
Confidence            999999999999999999999877531                     12 7777777877777666665555 443322


Q ss_pred             CC-cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHH
Q 010692          220 FA-PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY  298 (503)
Q Consensus       220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (503)
                      .. .+++.+....                  +.++...+..++.+..+...+..+++++..+++++||.+....++....
T Consensus       256 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~  317 (539)
T PF03137_consen  256 TSERQEEKESSER------------------KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFE  317 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccchhhhhhc------------------chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence            20 0111100000                  0000000000000011112245577778899999999999999999999


Q ss_pred             HHHhhhhhccccchhhhhcccchhhH--HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692          299 NFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL  376 (503)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (503)
                      .....++.+|+|.|++.+++.++..+  ....+...+.++|.+++|++.+|++-+.+...++.+...++..+........
T Consensus       318 ~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~  397 (539)
T PF03137_consen  318 SFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFL  397 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHee
Confidence            99999999999999999999986544  3334445577889999999999997654433344444433333331111110


Q ss_pred             ---------------------------------------------------hhHHHHHHHHHHHHHHHhhccchhhHHhh
Q 010692          377 ---------------------------------------------------SSLYGFLALFTVGELLVFATQAPVNYVCL  405 (503)
Q Consensus       377 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (503)
                                                                         .....+++..++..+..+....+...+..
T Consensus       398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~L  477 (539)
T PF03137_consen  398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITL  477 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeee
Confidence                                                               01123344444555555667778888889


Q ss_pred             cccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       406 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +.+++++|+.|.|+.....+++|.+.+|+++|++.|..-
T Consensus       478 R~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC  516 (539)
T PF03137_consen  478 RCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC  516 (539)
T ss_dssp             ---------------------------------------
T ss_pred             ccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence            999999999999999999999999999999999999653

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.90  E-value=6.9e-22  Score=188.05  Aligned_cols=366  Identities=13%  Similarity=0.038  Sum_probs=242.1

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCchhHHHH-HHHHHHHHHHhhhhhHHH---------
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW---------  127 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~---------  127 (503)
                      +++.+++|.+..+.+++..+..+...+.+++.|+++|    |+||||.++++ .....++.++.+++++++         
T Consensus        28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~  107 (477)
T TIGR01301        28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK  107 (477)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence            4556889999999999999999999999999999999    59999988774 666667777777776643         


Q ss_pred             --------HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCc--hhHHHHHHhHHhHHHHHHHHHHHhh--cCc-------
Q 010692          128 --------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSH-------  188 (503)
Q Consensus       128 --------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l--~~~-------  188 (503)
                              .++++-.+..++.....+...++++|.+|+++|  +.+.++.+...++|.++|+.++++.  .+.       
T Consensus       108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~  187 (477)
T TIGR01301       108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE  187 (477)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence                    223333344557777888899999999998865  5799999999999999999999875  211       


Q ss_pred             ------chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcc
Q 010692          189 ------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS  262 (503)
Q Consensus       189 ------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (503)
                            .+.|+.|++.+++.++..++..+..||.+...  +++.+..   +                 .++..  +.+. 
T Consensus       188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~---~-----------------~~~~~--~~~~-  242 (477)
T TIGR01301       188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINS---E-----------------AAPPS--KHGE-  242 (477)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhh---h-----------------ccccc--ccch-
Confidence                  16789999999888888888888777744211  0000000   0                 00000  0000 


Q ss_pred             cchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhh-hcccch-------hh---H-HHHHhh
Q 010692          263 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN-IYHMSN-------AD---M-MFGGVT  330 (503)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~---~-~~~~~~  330 (503)
                            ....++.++.++++  .|.++.+++..++...+.+.+..|.+.+..+ .++.++       ..   . .-..+.
T Consensus       243 ------~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~  314 (477)
T TIGR01301       243 ------EAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN  314 (477)
T ss_pred             ------hhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence                  01112222333322  3677888888888888888888887776653 443221       11   1 112333


Q ss_pred             hhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHH
Q 010692          331 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVG  389 (503)
Q Consensus       331 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~  389 (503)
                      .+...+.+++..++.+|+|+|+    .....+.++.+..+.......+                     .+..++.+.+.
T Consensus       315 s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  390 (477)
T TIGR01301       315 SVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL  390 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence            4444556667777888887531    3434444444433333332221                     25566677777


Q ss_pred             HHHHhhccchhhHHhhcccCC--CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHH
Q 010692          390 ELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW-RKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~  465 (503)
                      |+.....+..-++++.+..++  +..|..+|+.|.+..+ .+++.....|.+.+..|+. ..++.+.++..+++.++..
T Consensus       391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~  468 (477)
T TIGR01301       391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL  468 (477)
T ss_pred             hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence            777777777778888888885  5669999999998888 8888888888877766632 3445555555555554443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR01272 gluP glucose/galactose transporter

Probab=99.90  E-value=1.7e-21  Score=178.62  Aligned_cols=276  Identities=12%  Similarity=0.086  Sum_probs=199.1

Q ss_pred             hhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc------------
Q 010692          121 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------  188 (503)
Q Consensus       121 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------  188 (503)
                      +..++|+.++++-++.|.|.+...+..+.++++..++|++++.+++.+..+++|..++|.+++.+...            
T Consensus         5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~   84 (310)
T TIGR01272         5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA   84 (310)
T ss_pred             HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence            35678999999999999999999999999999999999999999999999999999999999987621            


Q ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhcc-ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhccc
Q 010692          189 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI  263 (503)
Q Consensus       189 ----~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (503)
                          ..|+++|++.+.+.++..+++.+.. ||..+     ++.+...                  +       ++  .  
T Consensus        85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~~------------------~-------~~--~--  130 (310)
T TIGR01272        85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARVS------------------S-------GD--T--  130 (310)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccccc------------------c-------cc--c--
Confidence                4799999977776555555444332 33110     0000000                  0       00  0  


Q ss_pred             chhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhh--cccchhhH-HHHHhhhhhhhhchhh
Q 010692          264 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS  340 (503)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~  340 (503)
                                   ...+..+++|.++...+..+++.....++..|.+.|+.+.  ++.++... ...+....+.++|+++
T Consensus       131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~  197 (310)
T TIGR01272       131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI  197 (310)
T ss_pred             -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence                         0012345778888888888888888999999999999864  57776544 4557778899999999


Q ss_pred             hhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHH
Q 010692          341 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS  420 (503)
Q Consensus       341 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  420 (503)
                      ++++.||+++|     +.+..+..++++..++....+... ......+.+++.+..+|...+...+..|+ +.+++.++.
T Consensus       198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~  270 (310)
T TIGR01272       198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL  270 (310)
T ss_pred             HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence            99999999987     555555544444443333333322 23355567788888889888888888765 356666775


Q ss_pred             HHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          421 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       421 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                       ....+ |+.+.|++.|.+.|..| .+.++++.
T Consensus       271 -~~~~~-Gg~i~P~l~G~lad~~g-~~~a~~v~  300 (310)
T TIGR01272       271 -CLAIV-GGAIVPLLQGSLADCLG-IQLAFALP  300 (310)
T ss_pred             -HHHHh-cchHHHHHHHHHHHhcc-chHHHHHH
Confidence             45555 88999999999999877 55666543

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK09848 glucuronide transporter; Provisional

Probab=99.89  E-value=7.6e-21  Score=185.28  Aligned_cols=325  Identities=10%  Similarity=-0.003  Sum_probs=207.7

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc----CCchh-HHHHHHHHHHHHHHh-hh----hh--HHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH----NPFRL-IGVGLSVWTFATAGC-GS----SF--DFWSIAIC  132 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~-l~~~~~~~~~~~~~~-~~----~~--~~~~l~~~  132 (503)
                      .+.+|++..++|.+.+...+..++..++.|+++||.    ||||. +..+.+...+..++. ..    ++  ..+.+++.
T Consensus        36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (448)
T PRK09848         36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT  115 (448)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence            677899999999999999999999999999999996    66664 455555444444332 11    11  22334455


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhH-----HhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHH
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMC-----IPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLP  204 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~  204 (503)
                      -++.+++.+...+...++..+..+ +++|.+..++-..+     ..+|..++|.+++...+..  +|.....+.++++++
T Consensus       116 ~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~  195 (448)
T PRK09848        116 YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMV  195 (448)
T ss_pred             HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence            667788888888888888787765 46788876666543     3355566666665443221  222222233333333


Q ss_pred             HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692          205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ  284 (503)
Q Consensus       205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (503)
                      ..++.....||..+.    ++++                                             ....+.++.+++
T Consensus       196 ~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~~~~~~~l~~  226 (448)
T PRK09848        196 LYFICFKSTRENVVR----IVAQ---------------------------------------------PSLKISLQTLKR  226 (448)
T ss_pred             HHHHHHcCcEeccCC----CccC---------------------------------------------CCHHHHHHHHhC
Confidence            333333333332110    0000                                             011245678899


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH-HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      ||.++...+..++............|.|+++..+.++....+. ....++.+++.++.+++.||+++|     +.+..+.
T Consensus       227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~~g~  301 (448)
T PRK09848        227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFLIGA  301 (448)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence            9999988887777777777777788888888777765433332 222456677888999999999987     5555555


Q ss_pred             HHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC-------CchhHHHHHHHHHhhcccccchh
Q 010692          364 FLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIHIFGDVPSSP  434 (503)
Q Consensus       364 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~g~~~~~~  434 (503)
                      .+..+..+.....  .+.+.......+.+.+.+...+...++..+..+.+       .+|...|+.+....+ |..+++.
T Consensus       302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl-g~aig~~  380 (448)
T PRK09848        302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC-GQAIGGS  380 (448)
T ss_pred             HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-HHHHHHH
Confidence            4444433333332  23444444455566666666777777777766542       468899998887777 8888999


Q ss_pred             hHHHHHhhhh
Q 010692          435 LVGVLQDHVN  444 (503)
Q Consensus       435 ~~g~l~~~~g  444 (503)
                      +.|.+.+..|
T Consensus       381 i~g~~l~~~G  390 (448)
T PRK09848        381 IPAFILGLSG  390 (448)
T ss_pred             HHHHHHHHcC
Confidence            9998877654

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.89  E-value=1.1e-21  Score=180.51  Aligned_cols=361  Identities=15%  Similarity=0.128  Sum_probs=234.1

Q ss_pred             cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH--HH-HHhhhh----h
Q 010692           52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF--AT-AGCGSS----F  124 (503)
Q Consensus        52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~--~~-~~~~~~----~  124 (503)
                      ...+..+.++   +++.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++..+.+..+  +. ....+.    .
T Consensus        25 i~~pF~~iWL---~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~  101 (412)
T PF01306_consen   25 IFLPFFPIWL---TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQS  101 (412)
T ss_dssp             HHHHHHHHHH---HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHT
T ss_pred             HHHHHHHHHH---ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344445555   456899999999999999999999999999999999977765544433221  22 222222    2


Q ss_pred             HHH-HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHH
Q 010692          125 DFW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML  203 (503)
Q Consensus       125 ~~~-~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~  203 (503)
                      |++ ..+++-+..|+......|..-+++.++..  +.+.=.|-.....++|.+++..++|.+.+ .+-+..||+....++
T Consensus       102 n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~  178 (412)
T PF01306_consen  102 NFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAI  178 (412)
T ss_dssp             T-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHH
Confidence            222 22333333444444455556666655532  23445677788899999999999999886 356778888777766


Q ss_pred             HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692          204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL  283 (503)
Q Consensus       204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (503)
                      +..++.++..|+..+.....+..+..                                         +.+...++..+++
T Consensus       179 il~lll~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~l~  217 (412)
T PF01306_consen  179 ILLLLLLLLKPDVPPQAEVADALGAK-----------------------------------------KDKVSLKDVLSLF  217 (412)
T ss_dssp             HHHHHHHSS---SSSSS-SSTTSSS-----------------------------------------------HHHHHHHT
T ss_pred             HHHHHHHHcCCcCchhhhhhcccccC-----------------------------------------CCCCcHHHHHHHh
Confidence            66666555554432221111100000                                         0000125567889


Q ss_pred             hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh---H-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      |+|++|.+.+........+..+....|.|....+.....+   . .+.++..+..++.-.+..++.+|+|.|     +.+
T Consensus       218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~L  292 (412)
T PF01306_consen  218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLL  292 (412)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHH
Confidence            9999999888666655666666555666666544332211   1 334556677788888999999999998     788


Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          360 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      +....+..+-.......++.+.....=.+-+.-.........-++.+.+|++..++...+.......+|.++.+.+.|.+
T Consensus       293 llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~l  372 (412)
T PF01306_consen  293 LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYL  372 (412)
T ss_dssp             HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhh
Confidence            88888888888877778888888888788888777778888899999999999899888864444334888888899999


Q ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          440 QDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       440 ~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +|..| ++.+|++++.+.+...++..
T Consensus       373 yd~~G-~~~tylimg~iv~~~~li~~  397 (412)
T PF01306_consen  373 YDRIG-FQHTYLIMGLIVLPFTLISA  397 (412)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhcC-cHHHHHHHHHHHHHHHHHhe
Confidence            99998 77788887776554444443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.89  E-value=1.5e-20  Score=179.71  Aligned_cols=147  Identities=14%  Similarity=0.128  Sum_probs=122.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~~~  142 (503)
                      .+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++.+..+ +...++++..+.++|.|.
T Consensus        37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~  116 (493)
T PRK15462         37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL  116 (493)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence            567899999999999999999999999999999999 999999999999999988776543 223344444555566777


Q ss_pred             hhhchhhhhhccCCCC--CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          143 FISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ..+...++++|.+|++  +|..++++...+.++|..++|.+.+++.+..|||+.|.+.++. .+..++.++.
T Consensus       117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig-m~l~li~~~~  187 (493)
T PRK15462        117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG-MIAGLVIFLC  187 (493)
T ss_pred             ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH-HHHHHHHHHH
Confidence            7788889999999875  6899999999999999999999999999989999999987664 3444444433

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.88  E-value=4.2e-21  Score=185.84  Aligned_cols=328  Identities=16%  Similarity=0.136  Sum_probs=251.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCch-hHHHHHHHHHHHHHHhhhh-h-------HHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFR-LIGVGLSVWTFATAGCGSS-F-------DFWSIAI  131 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-------~~~~l~~  131 (503)
                      .+.+|+++..+|.+..+..+..++..|+.|.++|    |+|||| .+++|....+++.++.... +       ....+++
T Consensus        29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~  108 (428)
T PF13347_consen   29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV  108 (428)
T ss_pred             HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence            6778999999999999999999999999999999    899766 5667888888888877765 4       2334567


Q ss_pred             HHHHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHH
Q 010692          132 CRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILML  203 (503)
Q Consensus       132 ~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~  203 (503)
                      .-++..++.........++..|..+ +++|.+..++-+.+..+|..+...+.+.+.+.       .+|++..++.+++.+
T Consensus       109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~  188 (428)
T PF13347_consen  109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL  188 (428)
T ss_pred             HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence            7777799999999999999999997 56899999999999999987666666655421       169999999999988


Q ss_pred             HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692          204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL  283 (503)
Q Consensus       204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (503)
                      +..++..+..+|..+..  +++++                                            ..+..+.++.++
T Consensus       189 v~~~i~~~~~ke~~~~~--~~~~~--------------------------------------------~~~~~~~~~~~~  222 (428)
T PF13347_consen  189 VFFLITFFFVKERSVEV--TEQEK--------------------------------------------KISLRDSLRSLF  222 (428)
T ss_pred             HHhhhhhheeeeccccc--ccccc--------------------------------------------ccccccchhhhc
Confidence            88888887776611110  00000                                            011124577888


Q ss_pred             hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      +||.++...+..++............+.|.++..+.+.....+..+..++.+++.++.++++||+|+|     +....+.
T Consensus       223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~~~~  297 (428)
T PF13347_consen  223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYIIGL  297 (428)
T ss_pred             ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehhhhH
Confidence            99999988888888888877777788888888777775444555667788899999999999999998     6666666


Q ss_pred             HHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-------CCchhHHHHHHHHHhhcccccchh
Q 010692          364 FLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSP  434 (503)
Q Consensus       364 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~  434 (503)
                      .+.+...+.....  ++.+...+..++.+.+.+..+....++..|..+.       +..|...|+.+..... +..+++.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~-~~~la~~  376 (428)
T PF13347_consen  298 LLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI-GQGLAGA  376 (428)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-HHHHHHH
Confidence            6655555554444  4777788888888888888888778888877653       4468888888888887 8888898


Q ss_pred             hHHHHHhhhh
Q 010692          435 LVGVLQDHVN  444 (503)
Q Consensus       435 ~~g~l~~~~g  444 (503)
                      +.|.+.+..|
T Consensus       377 i~g~~l~~~G  386 (428)
T PF13347_consen  377 IVGLLLALVG  386 (428)
T ss_pred             HHHHHHHHhC
Confidence            8998877654

>PRK11462 putative transporter; Provisional

Probab=99.87  E-value=7.2e-20  Score=177.71  Aligned_cols=325  Identities=13%  Similarity=0.031  Sum_probs=205.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCch-hHHHHHHHHHHHHHHhhhhhH------HHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r  133 (503)
                      .+.+|+++..+|.+..+.-+.-++.-|+.|.++||    +|||| .++++.+..+++.+++-..++      +..+++.-
T Consensus        37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~  116 (460)
T PRK11462         37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY  116 (460)
T ss_pred             HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence            57789999999999999999999999999999995    68765 556677777777766654442      34455666


Q ss_pred             HHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHHHH
Q 010692          134 MLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPF  205 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~  205 (503)
                      ++..++.........++..|..+ ++||++..++...+..+|..+++.+...+.+.       .+|+....+.+++.++.
T Consensus       117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~  196 (460)
T PRK11462        117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM  196 (460)
T ss_pred             HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            67788888888889999999987 77899999999999999988887775544322       36888888887776666


Q ss_pred             HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692          206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE  285 (503)
Q Consensus       206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (503)
                      .++++...+|..+.    ++++                                             .+..+.++..++|
T Consensus       197 ~~i~~~~~kE~~~~----~~~~---------------------------------------------~~~~~~l~~~~~N  227 (460)
T PRK11462        197 LAFCFFTTKERVEA----PPTT---------------------------------------------TSMREDLRDIWQN  227 (460)
T ss_pred             HHHHHhcceeccCC----CccC---------------------------------------------CCHHHHHHHHhCC
Confidence            66555544442110    0000                                             0012456778888


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      |.++..+...++..............|.....+.......+.....++.+++.++++++.||+++|     +........
T Consensus       228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~~~~  302 (460)
T PRK11462        228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWTNAL  302 (460)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHH
Confidence            888777655544444433333333333333334333222344556677888899999999999987     443322222


Q ss_pred             HHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692          366 GAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       366 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      ..+..+.....  .+.....+..++.+++.+...+....+..+..+       .+..|...+.......+ |..+++.+.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl-g~alg~~i~  381 (460)
T PRK11462        303 LAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL-GLAFGGALI  381 (460)
T ss_pred             HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-HHHHHHHHH
Confidence            22211122222  222223333344444444444333445554433       22334445666566777 888888888


Q ss_pred             HHHHhhhh
Q 010692          437 GVLQDHVN  444 (503)
Q Consensus       437 g~l~~~~g  444 (503)
                      |++.+..|
T Consensus       382 g~iL~~~G  389 (460)
T PRK11462        382 GWMLAYGG  389 (460)
T ss_pred             HHHHHHcC
Confidence            88877643

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.87  E-value=2e-20  Score=168.18  Aligned_cols=347  Identities=14%  Similarity=0.093  Sum_probs=263.9

Q ss_pred             ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-hHHHHHHHHHHHHHHhhhhhH---HHHHHHHHHHHHhhhhhhhhch
Q 010692           72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISLA  147 (503)
Q Consensus        72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~g~~~~~~~~  147 (503)
                      .+.++...++..+..++.+|+.|.++|+.|+|| .+-....+..+++.+..++++   ++..++.-.+..++.....+..
T Consensus        57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy  136 (438)
T COG2270          57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY  136 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence            345688899999999999999999999999665 455555566666666676654   4455567788889998899999


Q ss_pred             hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH--Hhh-c---------------CcchhHHHHHHHHHHHHHHHHHH
Q 010692          148 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVV-G---------------SHLNWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       148 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l-~---------------~~~gwr~~f~~~~~~~~~~~~~~  209 (503)
                      .+++.+..++++-++..+.-.....+|..+.-+..  ... .               +...-|..+.+.++-.++..+-.
T Consensus       137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm  216 (438)
T COG2270         137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM  216 (438)
T ss_pred             hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence            99999999999888888877777777776654442  111 1               22346777888777766666666


Q ss_pred             HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHH
Q 010692          210 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV  289 (503)
Q Consensus       210 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (503)
                      ++..|+..+.. .++                                        .+......++.+.+++++.+++.+.
T Consensus       217 ~~~v~~~~~~~-~~~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~  255 (438)
T COG2270         217 ILNVHDAEKIS-SPP----------------------------------------PTALRNGFKELKSTFKEIRGRKNLV  255 (438)
T ss_pred             Hhccccccccc-ccc----------------------------------------hHHHHHHHHHHHHHHHHHhcccchH
Confidence            66554422110 000                                        0111245566667888999999999


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH
Q 010692          290 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI  368 (503)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~  368 (503)
                      ..+++.+++.-+.+++..+...|....+|.+..+. .+.....+.+++|+++.|++.||++.|     +++..+.++...
T Consensus       256 ~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~  330 (438)
T COG2270         256 LFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSI  330 (438)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHH
Confidence            99999999999999999999999998899997766 555677899999999999999999998     666666666666


Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHH
Q 010692          369 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK  448 (503)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~  448 (503)
                      .++..........+..+..+.+.+.+..+...-++..+.+|+++.++..|+++..... +.+.||.+.+.+.+.+|+.+.
T Consensus       331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~  409 (438)
T COG2270         331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRA  409 (438)
T ss_pred             HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhh
Confidence            6655555555555666667777888888888999999999999999999999988888 889999999999999998877


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010692          449 TTLALTSIFFLAAGIWF  465 (503)
Q Consensus       449 ~~~~~~~~~~~~~~~~~  465 (503)
                      .+....++..++..+..
T Consensus       410 g~~~i~vll~iGl~~L~  426 (438)
T COG2270         410 GVLSIIVLLLIGLLLLL  426 (438)
T ss_pred             HHHHHHHHHHhhHhhEE
Confidence            77777666666655444

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.87  E-value=1.1e-20  Score=170.55  Aligned_cols=365  Identities=13%  Similarity=0.057  Sum_probs=248.7

Q ss_pred             hhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH
Q 010692           28 SKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG  107 (503)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~  107 (503)
                      ..+|||..++..++..+...+    .......+-......|+ +....-|+.-+|++.+....+++-|+.|++|-|..++
T Consensus        39 Vy~rRW~vLl~~slL~~SN~~----qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l  113 (480)
T KOG2563|consen   39 VYPRRWVVLLAFSLLNFSNGM----QWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL  113 (480)
T ss_pred             cchhHhHHHHHHHHHHhcCcc----hheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence            456778777766666665544    22223333234456677 7777889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhh------hHHH--HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH
Q 010692          108 VGLSVWTFATAGCGSS------FDFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY  179 (503)
Q Consensus       108 ~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~  179 (503)
                      ++..+.++|..+-..+      +.++  ..+.+..+.+.+.-.+......+..-||+++||..+..+-.++..+|.++|.
T Consensus       114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~  193 (480)
T KOG2563|consen  114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF  193 (480)
T ss_pred             HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence            9999999999987665      3455  6778999999888877777778888899999999999999999999999999


Q ss_pred             HHHHhhcCc------chhHH--HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692          180 VYGGVVGSH------LNWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI  251 (503)
Q Consensus       180 ~l~~~l~~~------~gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (503)
                      ++...+..+      ..|..  .|+...+++.+..++..+..++.++.  ++.......                     
T Consensus       194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~~---------------------  250 (480)
T KOG2563|consen  194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAAL---------------------  250 (480)
T ss_pred             hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhhh---------------------
Confidence            998888743      34654  35555555544444444444432221  111111100                     


Q ss_pred             chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhh
Q 010692          252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTI  331 (503)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (503)
                                         .-.++.++.+++++++++....+++......+++..+.+...+...+-.+..+.....+..
T Consensus       251 -------------------~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~i  311 (480)
T KOG2563|consen  251 -------------------QDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMI  311 (480)
T ss_pred             -------------------hcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHH
Confidence                               0012347788999999999999888887777877777666444332222223345566777


Q ss_pred             hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692          332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHS  407 (503)
Q Consensus       332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (503)
                      ++++++.++.|.+.||.+.-+    ..............+.+...    ...+.+.....+.+++.....|....+..|.
T Consensus       312 v~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~  387 (480)
T KOG2563|consen  312 VAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVET  387 (480)
T ss_pred             HHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence            889999999999999987652    22222222222221111111    2333444555566666667778778888888


Q ss_pred             cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      ..|..-++..|+.+...++++.. -.++.+...+..+
T Consensus       388 TyPv~E~tSsGll~~~gq~f~~~-~~~~~~~~~~~~~  423 (480)
T KOG2563|consen  388 TYPVAEGTSSGLLNLSGQIFGVI-LVFIMGILAEDLG  423 (480)
T ss_pred             ccccCCcccceeEEeehhHHHHH-HHHHHHHHhhccC
Confidence            88887888889988887775544 4666676666554

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.82  E-value=1.6e-17  Score=154.76  Aligned_cols=330  Identities=10%  Similarity=0.031  Sum_probs=241.2

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCc-hhHHHHHHHHHHHHHHhhhhhH------HHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r  133 (503)
                      .+.+|+++..+|.+..+.-+--++.-|+.|.+.||    +||+ +.++.+.+..++.+.++-.+++      ..-.++.-
T Consensus        40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY  119 (467)
T COG2211          40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY  119 (467)
T ss_pred             hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence            67789999999999999999999999999999995    6764 4678888888888888877763      44456677


Q ss_pred             HHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhc-----C--cchhHHHHHHHHHHHHHH
Q 010692          134 MLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVG-----S--HLNWRYAFWGEAILMLPF  205 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-----~--~~gwr~~f~~~~~~~~~~  205 (503)
                      .+.+++.........++..|..+ ++||.+..++-+.+.++|..+...+...+.     +  ..||+..-.+.++++.+.
T Consensus       120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~  199 (467)
T COG2211         120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL  199 (467)
T ss_pred             HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence            88889999888889999999975 678999999999999999777665554443     2  458999999999998888


Q ss_pred             HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692          206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE  285 (503)
Q Consensus       206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (503)
                      .+.+++-.+|...+..+.++..                                            .++...++..+++|
T Consensus       200 ~l~~~~~v~ER~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~N  235 (467)
T COG2211         200 LLFCFFNVKERVVETQPTKTGV--------------------------------------------KLKLKDSFLLIFKN  235 (467)
T ss_pred             HHHHHHHhhcccCccccCcccc--------------------------------------------cccHHHHHHHHHcc
Confidence            8888887766433111111000                                            01112445678899


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      |.+...++..++.....+........|.+...+.++... ........+.+++.++..++.+|+|+|     ++..++.+
T Consensus       236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~~~  310 (467)
T COG2211         236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIGLL  310 (467)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHHHH
Confidence            999998887777777777777777777776666665433 333344455566688999999999999     77777777


Q ss_pred             HHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhh
Q 010692          365 LGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPL  435 (503)
Q Consensus       365 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~  435 (503)
                      +.++..+.....+  +....++..++.+.+.+...+...+++.+.+.       .+..|...|....+... |..++..+
T Consensus       311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~-g~ala~~~  389 (467)
T COG2211         311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL-GLALAGFI  389 (467)
T ss_pred             HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH-HHHHHHHH
Confidence            6666666555554  44555555566667777666666666665432       24567788888777777 88888889


Q ss_pred             HHHHHhhhh
Q 010692          436 VGVLQDHVN  444 (503)
Q Consensus       436 ~g~l~~~~g  444 (503)
                      .|++.+..|
T Consensus       390 ~g~~L~~~G  398 (467)
T COG2211         390 PGWILGAIG  398 (467)
T ss_pred             HHHHHHHcC
Confidence            999887665

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.80  E-value=1.6e-17  Score=153.14  Aligned_cols=391  Identities=13%  Similarity=0.115  Sum_probs=227.4

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA  141 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~  141 (503)
                      .+.+|+++++..-+.++|..-.-+..+++|+++||+ |+|+++..|.++..+|.++.+.+.  +...++++-.+.++|.|
T Consensus        53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~G  132 (498)
T COG3104          53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTG  132 (498)
T ss_pred             cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccc
Confidence            344669999998889999888889999999999998 999999999999999999999884  78899999999999999


Q ss_pred             hhhhchhhhhhccCCCCC--chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          142 SFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      .+-+...++++|.+|+++  |-..++++.++.++|+.++|++.+++.+.+||+..|-+.++-.....+. +...+++...
T Consensus       133 l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~-f~~~~r~~~~  211 (498)
T COG3104         133 LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI-FLLGRRHVKG  211 (498)
T ss_pred             cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH-HHHccchhcC
Confidence            999999999999998663  6678999999999999999999999999999999999888765544444 4443433322


Q ss_pred             CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh----------h---hhhhhchH--HHHHHHhh
Q 010692          220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR----------F---LNQLSQFS--QDTKVLLQ  284 (503)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~--~~~~~~~~  284 (503)
                      ...+++...........      ........+-..........+....          .   .+..+...  .+.++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~  285 (498)
T COG3104         212 IGGVPDPNPLSFNFLLP------VLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLA  285 (498)
T ss_pred             CCCCCCccchhhhhhhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHH
Confidence            21111111110000000      0000000000000000000000000          0   00000000  11111110


Q ss_pred             -hhhHHHHHHHHHHHHHHhhhhhccccchhhhh-cccchhhHHHHHhhhhhhhhchhhhhhhhhccccc---chhhHHHH
Q 010692          285 -EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKLL  359 (503)
Q Consensus       285 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~~  359 (503)
                       -+.+....+.+.++......+..+......+. +|.+.....+.++..+.-++..++..++..+++++   .....+.-
T Consensus       286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFa  365 (498)
T COG3104         286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFA  365 (498)
T ss_pred             HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHH
Confidence             01111111222222222333333333333333 33333333444555556666666777777774443   22222333


Q ss_pred             HHHHHHHHHHHHHHHH---h------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccc
Q 010692          360 SAATFLGAISCLTAFC---L------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV  430 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~  430 (503)
                      ++..+.++..+++...   .      .+.++.+..+++..++--+..|...+++.+..|++..+..+++....... |+.
T Consensus       366 lGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~-~~~  444 (498)
T COG3104         366 LGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAA-GQT  444 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHH
Confidence            4433334433333332   1      14566667777777777788888999999999999999999887544433 555


Q ss_pred             cchhhHHH------HHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692          431 PSSPLVGV------LQDHVNNWRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       431 ~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~  464 (503)
                      ++..+.+.      ..+... ....|..++...++.....
T Consensus       445 l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~~  483 (498)
T COG3104         445 LGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGILL  483 (498)
T ss_pred             hhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHHH
Confidence            55444441      222222 3345555555544444433

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.78  E-value=2.3e-15  Score=136.30  Aligned_cols=328  Identities=14%  Similarity=0.065  Sum_probs=226.1

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-----Cchh-HHHHHHHHHHHHHHhhhh-----h-------H-
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRL-IGVGLSVWTFATAGCGSS-----F-------D-  125 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~-----~-------~-  125 (503)
                      ..|++++..-.+.+.+...+... ..+.+|+.+|+.+     ||.. +..|..+...+..+.+++     .       + 
T Consensus         7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~   85 (403)
T PF03209_consen    7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF   85 (403)
T ss_pred             HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence            57899998888988888877665 6889999999998     7764 455666666655555443     2       1 


Q ss_pred             -HH--HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHH---HHHHHH
Q 010692          126 -FW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY---AFWGEA  199 (503)
Q Consensus       126 -~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~---~f~~~~  199 (503)
                       .+  ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.+.-.-   .+...+
T Consensus        86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a  165 (403)
T PF03209_consen   86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA  165 (403)
T ss_pred             HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence             22  234466778999999999999999999999999999999999999999999999998887665322   222222


Q ss_pred             HHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHH
Q 010692          200 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT  279 (503)
Q Consensus       200 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (503)
                      ++.++..++..+-. |.......+.++                                           ++...+...+
T Consensus       166 ~i~~~l~~ia~wg~-E~r~~~~~~~~~-------------------------------------------~~~~~f~~a~  201 (403)
T PF03209_consen  166 LIALLLNLIALWGQ-EPRRSRRAAAAE-------------------------------------------RPRPPFREAW  201 (403)
T ss_pred             HHHHHHHHHHHHhc-ccCCcccccCCC-------------------------------------------CCCccHHHHH
Confidence            22222222222221 211110000000                                           0001223556


Q ss_pred             HHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHH
Q 010692          280 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFK  357 (503)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~  357 (503)
                      +++..+|+...+.+..++....++.-...+-.|--+.++++..+. .++.....+.++|-...+++..| .+++     +
T Consensus       202 ~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~  276 (403)
T PF03209_consen  202 RQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----R  276 (403)
T ss_pred             HHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----H
Confidence            777788888888777777777777777788889999999997555 66677788888888888887774 3333     3


Q ss_pred             HHHHHHHHHHHHH---HHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchh
Q 010692          358 LLSAATFLGAISC---LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP  434 (503)
Q Consensus       358 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~  434 (503)
                      ....++..++..+   .......+.+.+....++.|++.+.........+.+...++..|..+|.-...+.. +..++..
T Consensus       277 ~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~-A~Glg~~  355 (403)
T PF03209_consen  277 TAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI-ARGLGTF  355 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH-HHHHHHH
Confidence            3333333333322   22333356777888888888888877777788888888889999999998766666 7777888


Q ss_pred             hHHHHHhhh
Q 010692          435 LVGVLQDHV  443 (503)
Q Consensus       435 ~~g~l~~~~  443 (503)
                      ++|.+.|..
T Consensus       356 ~GG~~~D~~  364 (403)
T PF03209_consen  356 LGGALRDLV  364 (403)
T ss_pred             HHHHHHHHH
Confidence            888887753

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=99.77  E-value=1.4e-17  Score=155.28  Aligned_cols=387  Identities=13%  Similarity=0.130  Sum_probs=229.9

Q ss_pred             ccccCCchhHHHHHHhhhcccCCCCCccccccccc-ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCC-chhHHHH
Q 010692           32 SLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVG  109 (503)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~  109 (503)
                      .|..+.+..+..++...+.+...+..-++   +++ |.+.+.+..|++.++..++.+++++..|+...|.+. |+.++.|
T Consensus        32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpY---l~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s  108 (488)
T KOG2325|consen   32 NWRSIYLALLNSFLVAVQFSIYLTSMWPY---LQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS  108 (488)
T ss_pred             chHhHHHHHHHHHHHhhhheEEEeecchh---hhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence            44445555666777777544444433222   222 467788889999999999999999999999999986 8888999


Q ss_pred             HHHHHHHHHHh-hhh---h-HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692          110 LSVWTFATAGC-GSS---F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV  184 (503)
Q Consensus       110 ~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~  184 (503)
                      .++..+|.++. ++.   + .-+.++++|++.|+|.| ......+|+++....++|.++++....+..+|.++||.++..
T Consensus       109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~  187 (488)
T KOG2325|consen  109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA  187 (488)
T ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence            99999999998 332   3 67889999999999987 556788999999888999999999999999999999998876


Q ss_pred             hcCc----------c---hhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692          185 VGSH----------L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI  251 (503)
Q Consensus       185 l~~~----------~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (503)
                      +...          .   -+..+-|+.+++.++..+...++..|..++..+.+.++.                       
T Consensus       188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~-----------------------  244 (488)
T KOG2325|consen  188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV-----------------------  244 (488)
T ss_pred             HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-----------------------
Confidence            6521          1   134677888888888888888887664433211111110                       


Q ss_pred             chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHH-Hh
Q 010692          252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG-GV  329 (503)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~  329 (503)
                      ++++.+++..+.                 .-+..+..+.+.+..+...+......+..+.+....++.+.... ... ..
T Consensus       245 ~~~~~~~~~~~~-----------------~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~  307 (488)
T KOG2325|consen  245 EEEKSDIEKVKK-----------------PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGIT  307 (488)
T ss_pred             hhhccchhhhcc-----------------CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhH
Confidence            000000000000                 00111222333344455555555555666666666666664332 211 22


Q ss_pred             hhhhhhhch-hhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---h---------------------------h
Q 010692          330 TIVCGIVGT-ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---S---------------------------S  378 (503)
Q Consensus       330 ~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------------------~  378 (503)
                      ..+.+++.. +...+..-|+++...+. .++.++........+.....   .                           +
T Consensus       308 ~~~~g~ls~~~~l~~~f~~l~~i~~r~-~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~  386 (488)
T KOG2325|consen  308 LSISGILSVILLLLYIFTRLGKIDKRR-IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVP  386 (488)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccce-eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccC
Confidence            222222221 22222223333211000 22222222222221111100   0                           0


Q ss_pred             HHHHHH-HHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          379 LYGFLA-LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       379 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      .+..+. ...+.|...-.......++.++...|+.+++..|+....... +..++|.+.-.+....| +++.+.+.....
T Consensus       387 ~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~-~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~  464 (488)
T KOG2325|consen  387 LILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSI-ARVVGPIFSTAIFTLSG-PRPVWIILLCLL  464 (488)
T ss_pred             hhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccch-hhhhhHHHHhhhHHhcC-ccHHHHHHHHHH
Confidence            111111 112222222233445778888999999999999999766666 88888888877777776 666666655555


Q ss_pred             HHHHHHHH
Q 010692          458 FLAAGIWF  465 (503)
Q Consensus       458 ~~~~~~~~  465 (503)
                      ++...++.
T Consensus       465 l~~~~l~~  472 (488)
T KOG2325|consen  465 LVVAALWI  472 (488)
T ss_pred             HHHHHHHH
Confidence            55554443

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=99.73  E-value=3.3e-15  Score=141.87  Aligned_cols=318  Identities=13%  Similarity=0.084  Sum_probs=218.3

Q ss_pred             HHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--hhhhhhchhhhhhccCCCCCc
Q 010692           83 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG--EASFISLAAPFIDDNAPVPQK  160 (503)
Q Consensus        83 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g--~~~~~~~~~~~i~~~~~~~~r  160 (503)
                      .+...+.++..|.++||+|||..+....+...+..+...+.. +|.++    +.|+.  .+.......++++|....++|
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R  146 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEER  146 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHH
Confidence            677888999999999999999999999999888887777766 44333    44443  334677888999999999999


Q ss_pred             hhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCccc
Q 010692          161 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA  240 (503)
Q Consensus       161 ~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (503)
                      ...+++.......+..++|.+++.+.+..|.-.+|++..+..++..+...+.+||+.....+++.....        .  
T Consensus       147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~--------~--  216 (463)
T KOG2816|consen  147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE--------L--  216 (463)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc--------c--
Confidence            999999999999999999999999999899999999999999999988888889876553332100000        0  


Q ss_pred             CCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH-HHhhhhhccccchhhhhccc
Q 010692          241 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN-FVIGAYSYWGPKAGYNIYHM  319 (503)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  319 (503)
                       ..    .....                 ....+..+..+..-.+|..+.+++..+... .......-..+.|+...+++
T Consensus       217 -~~----~~~~~-----------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w  274 (463)
T KOG2816|consen  217 -TP----GSLDS-----------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGW  274 (463)
T ss_pred             -CC----Ccccc-----------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCc
Confidence             00    00000                 000000111112223344444444333333 33333332557888888999


Q ss_pred             chhhH-HHHHhhhhhhhhchhhhh-hhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc
Q 010692          320 SNADM-MFGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQ  397 (503)
Q Consensus       320 ~~~~~-~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (503)
                      ++... .+.+.......++.++.. .+...++.+     +.+..+...-........+..+.|.......+. .......
T Consensus       275 ~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~  348 (463)
T KOG2816|consen  275 NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVF  348 (463)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-Hhhcchh
Confidence            97665 355566666777776666 666677777     655555555555555555555555544444333 3445667


Q ss_pred             chhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          398 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +...+.....+.++++|++.++......+ ..+++|.+.+.+...+-
T Consensus       349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t~  394 (463)
T KOG2816|consen  349 PAIRAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALTL  394 (463)
T ss_pred             HHHHhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHHH
Confidence            77888888889999999999999877777 77889999988876553

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.70  E-value=1.7e-16  Score=128.56  Aligned_cols=139  Identities=29%  Similarity=0.390  Sum_probs=127.1

Q ss_pred             hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692           77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP  156 (503)
Q Consensus        77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~  156 (503)
                      ++.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+++.+++.|++.+...+....++.|.+|
T Consensus         2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   81 (141)
T TIGR00880         2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP   81 (141)
T ss_pred             EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence            34566788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          157 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +++|++..++.+....+|..+++.+++.+.+..+|++.|++.+++.++..+..++..||
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            99999999999999999999999999999998899999999988887777777666554

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.66  E-value=6.7e-15  Score=141.08  Aligned_cols=344  Identities=14%  Similarity=0.083  Sum_probs=210.4

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc---C--CchhHHHHHHHHHHHHHHhhhh----hHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH---N--PFRLIGVGLSVWTFATAGCGSS----FDFWSIAIC  132 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---G--rr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~  132 (503)
                      +-+++++|+++++.....+...+...+ -++.|.++|.+   |  ||+-++++.++.+++.+..+..    .+.....+.
T Consensus        14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~   92 (433)
T PF03092_consen   14 PFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL   92 (433)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence            344799999999999988888887765 55789999976   3  5556777777776666655543    346666677


Q ss_pred             HHHHHhhhhhhhhchhhhhhccCC--CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692          133 RMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       133 r~l~G~g~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      -++..+|.......+-+++.|...  ++.||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+..+
T Consensus        93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~  172 (433)
T PF03092_consen   93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL  172 (433)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence            788889999999999999999874  334788888999999999999999999999999999999999888777777666


Q ss_pred             hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692          211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV  290 (503)
Q Consensus       211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (503)
                      ++.+|....  +.++.....                  ++..             .......++....+++.++.+.+|.
T Consensus       173 ~~~~e~~~~--~~~~~~~~~------------------~~~~-------------~~~~~~~~~~~~~l~~~~~~~~i~~  219 (433)
T PF03092_consen  173 FLLEERKVR--PADEVFSFG------------------KEEV-------------PCLFGSFREQLSELWRALQQRAIWQ  219 (433)
T ss_pred             Hhhhhcccc--ccchhhccc------------------cccc-------------chhhHHHHHHHHHHHHHHhhhHHHH
Confidence            666551111  110000000                  0000             0000112333456777788888887


Q ss_pred             HHH-HHHHHHHHhhhhhccccchhhhhcc---cchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692          291 NVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG  366 (503)
Q Consensus       291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~  366 (503)
                      ..+ ..++............-.+..+..+   +++.-.  ..+. +.+.++.+++..+-+++.++...+ +++....++.
T Consensus       220 ~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~--~~~~-~vg~~~~l~g~~~y~~~~~~~~~R-~~~~~t~~~~  295 (433)
T PF03092_consen  220 PILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFY--GTLS-IVGSIASLLGILLYRKYFSNWSWR-RIFVVTTLVS  295 (433)
T ss_pred             HHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHH--HHHH-HHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHH
Confidence            666 3332222221111101111122223   343222  2222 233333444444444443332221 4444444333


Q ss_pred             HHHHHHHHH----------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH
Q 010692          367 AISCLTAFC----------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       367 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      +...+.-..          .++.+..+.--.+........+.|...++++..|+..-|+..++...+.|+ |..++..++
T Consensus       296 ~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s~~lg  374 (433)
T PF03092_consen  296 VLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVSSTLG  374 (433)
T ss_pred             HHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHHHHHH
Confidence            322221110          112222333334455555566778888899999999999999999988888 888888788


Q ss_pred             HHHHhhhh
Q 010692          437 GVLQDHVN  444 (503)
Q Consensus       437 g~l~~~~g  444 (503)
                      ..+.+..+
T Consensus       375 ~~l~~~~~  382 (433)
T PF03092_consen  375 AFLMELFG  382 (433)
T ss_pred             HHHHHHcC
Confidence            87777654

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR00889 2A0110 nucleoside transporter

Probab=99.65  E-value=1.5e-15  Score=146.01  Aligned_cols=145  Identities=16%  Similarity=0.215  Sum_probs=128.0

Q ss_pred             ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHhhhhhhhhch
Q 010692           72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLA  147 (503)
Q Consensus        72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~g~~~~~~~~  147 (503)
                      .++.+...++..++..++.++.|+++||+|+|+++..+.++.+++..+.....    +++.+++.+++.|++.+...+..
T Consensus       250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~  329 (418)
T TIGR00889       250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG  329 (418)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999988877666532    35677889999999999888888


Q ss_pred             hhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCc------chhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692          148 APFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ  216 (503)
Q Consensus       148 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~  216 (503)
                      ..++.|++|+++|++++++.+ ...++|.++||+++|.+.++      +||+..|++.+++.++..++.+++.||+
T Consensus       330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~  405 (418)
T TIGR00889       330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS  405 (418)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999999999997 67889999999999999876      4699999999999888888888888764

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.63  E-value=5.2e-13  Score=122.79  Aligned_cols=369  Identities=10%  Similarity=-0.002  Sum_probs=238.2

Q ss_pred             chhHHHHHHhhhcccCCCCCcccccccccc-cCCCccchh-hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692           38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGD-FKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF  115 (503)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~  115 (503)
                      ++|...|+..     ..|.-|.+.|-+.+. .|+|..|+. -+.-...-.+....++...+.|..|.|++++++.+...+
T Consensus         9 llc~~gf~~~-----frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~   83 (412)
T PF01770_consen    9 LLCLFGFFKE-----FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII   83 (412)
T ss_pred             HHHHHHHHHh-----cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4455555553     345555554444554 899988875 567788888889999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC--cchhHH
Q 010692          116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRY  193 (503)
Q Consensus       116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~  193 (503)
                      ...+.-+.++...+-+..+.-|++.+. ..+..+++-...|+++-.++.+...++.-+|..++.++|-.+..  ..+++.
T Consensus        84 t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~  162 (412)
T PF01770_consen   84 TWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ  162 (412)
T ss_pred             HHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence            999999999999999999999999984 66788999888899989999999999999999999999987764  345666


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccCC--CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhh
Q 010692          194 AFWGEAILMLPFAVLAFVIKPLQLKG--FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ  271 (503)
Q Consensus       194 ~f~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (503)
                      .+++......+..++.++ +|...+.  .++....+..     ..+.+....++..++.    .+.++.++.........
T Consensus       163 L~~isl~~~~~a~~~~~f-LP~~~~S~~f~r~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  232 (412)
T PF01770_consen  163 LNYISLASVSLALLIALF-LPMPKRSLFFHRKPPAEQD-----ANESESDKMNESPESS----SSTEKSPSTESSSRKSV  232 (412)
T ss_pred             HHHHHHHHHHHHHHHHHH-cCCCCcccceeccCccccc-----cccccccccccccccc----cccccCcccccchHHHH
Confidence            766665544444444444 4432211  1111000000     0000000000000000    01111111112222245


Q ss_pred             hhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccc---hhhHHHHHhhhhhhhhchhhhhhhhhcc
Q 010692          272 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS---NADMMFGGVTIVCGIVGTISGGFILDQM  348 (503)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~  348 (503)
                      .+..++++++..++|.++...+.+.+...++..+.+|......+....+   .-....-+...+.+.++.+..|++..+.
T Consensus       233 l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w  312 (412)
T PF01770_consen  233 LRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW  312 (412)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch
Confidence            5667788899999999999888888887777777777666555541111   1112333445556666777788874444


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692          349 GATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH  425 (503)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  425 (503)
                      .+..   ...+....++.++.++++...++.|...+...+.........+....-++.....+.-|...|+.+...-
T Consensus       313 ~~~~---~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al  386 (412)
T PF01770_consen  313 DRWG---ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL  386 (412)
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence            4321   0233344444555555666667888887777777777767666677777777777777777777654443

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.61  E-value=3.7e-15  Score=144.24  Aligned_cols=148  Identities=10%  Similarity=0.043  Sum_probs=131.0

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      ++.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+
T Consensus       255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~  334 (420)
T PRK09528        255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV  334 (420)
T ss_pred             hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            33466667889999999999999999999999999999999999999999999999999999999999999999988888


Q ss_pred             chhhhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          146 LAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       146 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ....++.|.+|++.|+...+. ++....+|.++++.+.|++.+.+|||..|++.+++.++..++.++..
T Consensus       335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~  403 (420)
T PRK09528        335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTL  403 (420)
T ss_pred             HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence            888999999999999887665 67788899999999999999999999999999888777766666554

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.58  E-value=3e-13  Score=120.84  Aligned_cols=238  Identities=12%  Similarity=0.083  Sum_probs=157.1

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      ..+-+++|.++.|++.+.........+..++.|.++||+|||+..++-+++.+++++ +-..++++.++++|++.|++.+
T Consensus        58 Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTS  136 (354)
T PF05631_consen   58 YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATS  136 (354)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHH
Confidence            455578999999999999999999999999999999999999999999999998885 4556899999999999999999


Q ss_pred             hhhhchhhh-hhccCCCC----CchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchh--HHHHHHHHHHHHHHHHHHHhcc
Q 010692          142 SFISLAAPF-IDDNAPVP----QKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       142 ~~~~~~~~~-i~~~~~~~----~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ....+--++ +.|+-..+    ..+..++... ...++-.+++.+++.++.+..+.  ..+|....++.++..+++...-
T Consensus       137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W  216 (354)
T PF05631_consen  137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW  216 (354)
T ss_pred             HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence            888877776 45553222    2222233222 22333345555566666655443  7788887777666666554443


Q ss_pred             ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692          214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      +|...+   +.+..                                          +..+...+.++.+.++|+++.+.+
T Consensus       217 ~ENyg~---~~~~~------------------------------------------~~~~~~~~a~~~i~~d~ril~LG~  251 (354)
T PF05631_consen  217 PENYGD---TSSSS------------------------------------------SLSGSFREAWRAILSDPRILLLGL  251 (354)
T ss_pred             cccCCC---ccccc------------------------------------------chHHHHHHHHHHHHcCchhHHHHH
Confidence            442111   11000                                          000111244667778899988888


Q ss_pred             HHHHHHHHhhhh-hccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhc
Q 010692          294 GYIAYNFVIGAY-SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ  347 (503)
Q Consensus       294 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~  347 (503)
                      ...++-...+.+ ..|.|..-.+..+. | -..+.+.+.++.++|+.+..++..+
T Consensus       252 ~qslFE~smy~FVflWtPaL~~~~~~~-P-~GlIFssFM~a~MlGS~lf~~l~s~  304 (354)
T PF05631_consen  252 IQSLFEGSMYLFVFLWTPALDPDDEEL-P-LGLIFSSFMVAMMLGSSLFSRLLSK  304 (354)
T ss_pred             HHHHHHHHHHHheeeeeceecCCCCCC-C-chHHHHHHHHHHHHHHHHHHHHHhC
Confidence            777776665555 45788766332222 2 2233455667777777777655543

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.57  E-value=1.9e-14  Score=141.73  Aligned_cols=154  Identities=10%  Similarity=0.026  Sum_probs=117.7

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      ++++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+.   ...+++...+++++++.|++.+
T Consensus       278 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  357 (490)
T PRK10642        278 SHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN  357 (490)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence            4667888888888888899999999999999999999999988887654443332   2233567778889999998877


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKG  219 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~  219 (503)
                      ........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.+++...+++++..+..+ +.||++++
T Consensus       358 ~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~  435 (490)
T PRK10642        358 CFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANR  435 (490)
T ss_pred             HHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCC
Confidence            777777888999999999999999755545566678888888887654 478777776666655555444 45887654

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.54  E-value=5.8e-14  Score=134.52  Aligned_cols=147  Identities=14%  Similarity=0.097  Sum_probs=124.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      ++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++.+++.+...
T Consensus       244 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~  323 (393)
T PRK15011        244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILG  323 (393)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999888888888999999999999999998888777666665555667888888889999998888777


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      +....+..|.+|+ +|++++++++...++|..+|+.+++.+.+++||+..|++.+++.++..++.++.
T Consensus       324 ~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        324 GIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             HHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            7777888999886 499999999999999999999999999998999999998887776655555443

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.53  E-value=3.6e-14  Score=135.58  Aligned_cols=144  Identities=13%  Similarity=0.037  Sum_probs=126.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHH--HHHHHHHHHHHhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVG  139 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~g  139 (503)
                      +++.++++.++.+.+++.+.+.++..++.++.|++.||+|||+.+.++..+.+++.++..+.++.  ..+++..++.|++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  308 (377)
T TIGR00890       229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT  308 (377)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence            44457788888889999999999999999999999999999999999999998888887776643  3345677888888


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF  205 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~  205 (503)
                      .+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus       309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~  374 (377)
T TIGR00890       309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS  374 (377)
T ss_pred             hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence            888888888899999999999999999999999999999999999999999999999988766554

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.53  E-value=1e-13  Score=139.51  Aligned_cols=140  Identities=9%  Similarity=-0.040  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC
Q 010692           76 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA  155 (503)
Q Consensus        76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~  155 (503)
                      .+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++.+.+++.+++.|++.+..++...++++|++
T Consensus       598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~  677 (742)
T TIGR01299       598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY  677 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            44566778999999999999999999999999999999999999999998888888999999988888999999999999


Q ss_pred             CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          156 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       156 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      |.++|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus       678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~  737 (742)
T TIGR01299       678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR  737 (742)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence            999999999999999999999999999988754 4567888888777666655554 47643

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.52  E-value=1.5e-13  Score=132.29  Aligned_cols=146  Identities=16%  Similarity=0.139  Sum_probs=128.0

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      ++.|.  .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+
T Consensus       244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~  321 (399)
T PRK05122        244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP  321 (399)
T ss_pred             HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence            44454  3457777888999999999999999999999999999999998888888888988888999999999998888


Q ss_pred             chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..||++.|++.+++.++..++.++..
T Consensus       322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  389 (399)
T PRK05122        322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY  389 (399)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence            88888889999999999999999999999999999999999888999999999888777666655554

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.51  E-value=1.2e-13  Score=133.75  Aligned_cols=154  Identities=18%  Similarity=0.105  Sum_probs=136.9

Q ss_pred             cccccc-cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           62 TPKRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        62 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      |.+.++ +|.+..+.|++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.|++.
T Consensus       247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  326 (417)
T PRK10489        247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS  326 (417)
T ss_pred             HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence            434455 8999999999999999999999999999999988888888888888888888888898888888999999998


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +...+...+++.|..|+++||++++++.....+|..+|+.+.|.+.+.+|++..+++.++..++..++.....|+
T Consensus       327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  401 (417)
T PRK10489        327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE  401 (417)
T ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence            887788889999999999999999999999999999999999999999999999998888877777777766655

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.50  E-value=8.4e-14  Score=134.57  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=125.5

Q ss_pred             hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692           75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN  154 (503)
Q Consensus        75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~  154 (503)
                      .+.+.+++.++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus       260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  339 (408)
T PRK09874        260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN  339 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence            45666777888889999999999999999999999998888888888888899999999999999999999999999999


Q ss_pred             CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .|+++||+.+++.+....+|..+||.+++.+.+..||++.|++.+++.++..+..++..
T Consensus       340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~  398 (408)
T PRK09874        340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL  398 (408)
T ss_pred             CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888777766554

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.50  E-value=2.4e-13  Score=129.82  Aligned_cols=145  Identities=11%  Similarity=0.152  Sum_probs=126.2

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      .+++|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.+...
T Consensus       227 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  306 (375)
T TIGR00899       227 IHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILA  306 (375)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57789999999998888888888899999999999999999988887777766666677888888889999999998888


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      +....++.|..|++ +++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..
T Consensus       307 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~  371 (375)
T TIGR00899       307 GIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL  371 (375)
T ss_pred             HHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence            88888999998764 679999999999999999999999999988999999999887766665543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.50  E-value=1.4e-13  Score=136.48  Aligned_cols=146  Identities=12%  Similarity=0.060  Sum_probs=116.0

Q ss_pred             cccc-cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHh
Q 010692           62 TPKR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGV  138 (503)
Q Consensus        62 ~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~  138 (503)
                      |.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.++....  .+.+.+.+..++.+.
T Consensus       299 p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (496)
T PRK03893        299 PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM  378 (496)
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence            4444 6899999999999999999999999999999999999999888877776665544332  344455555555554


Q ss_pred             hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Q 010692          139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV  207 (503)
Q Consensus       139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~  207 (503)
                      ......+....++.|.+|+++|++++++.+....+|..+||.+++.+.+.+||+..+...+....+..+
T Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~  447 (496)
T PRK03893        379 LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVI  447 (496)
T ss_pred             HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence            443445667788999999999999999999999999999999999999999999888766654444333

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.49  E-value=2.8e-13  Score=129.26  Aligned_cols=145  Identities=14%  Similarity=0.034  Sum_probs=131.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      +...+|+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++.++++|.+.+++.+++.|++.+
T Consensus       229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~  308 (382)
T TIGR00902       229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA  308 (382)
T ss_pred             HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence            44456799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL  208 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~  208 (503)
                      ...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|++.++++++..++
T Consensus       309 ~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       309 VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence            9999999999998 9989999999986 57889999999999999999996 6788888777655443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.47  E-value=2.3e-13  Score=131.32  Aligned_cols=151  Identities=14%  Similarity=0.050  Sum_probs=127.6

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++.+
T Consensus       244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  323 (406)
T PRK11551        244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV  323 (406)
T ss_pred             HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence            45567789999999999999999999999999999999999999888877777777777777888888888888999888


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhc
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.++. +|...+++.....++..++.++.
T Consensus       324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            788888999999999999999999999999999999999999998764 46666666665555555444443

>PRK12382 putative transporter; Provisional

Probab=99.47  E-value=5.5e-13  Score=127.97  Aligned_cols=145  Identities=12%  Similarity=0.101  Sum_probs=128.3

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      ++.+.+  +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|++.+...+
T Consensus       244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  321 (392)
T PRK12382        244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP  321 (392)
T ss_pred             HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence            445544  356677788888899999999999999999999999999999988888888888888899999999998888


Q ss_pred             chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ...+.+.|.+|+++|++++++++....+|..+||.+.+.+.++.||+..|.+.+++.++..++.++.
T Consensus       322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  388 (392)
T PRK12382        322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS  388 (392)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence            8888899999999999999999999999999999999999999999999999998887777666544

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.46  E-value=3.3e-13  Score=127.58  Aligned_cols=150  Identities=19%  Similarity=0.171  Sum_probs=138.2

Q ss_pred             cccccc-cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692           62 TPKRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG  139 (503)
Q Consensus        62 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  139 (503)
                      +.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....++.+.+++..++.|++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~  278 (352)
T cd06174         199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFG  278 (352)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            333344 4889999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      .+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+++.+++.++..+..++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~  350 (352)
T cd06174         279 LGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL  350 (352)
T ss_pred             HhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence            999999999999999999999999999999999999999999999998889999999999888777665543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK03545 putative arabinose transporter; Provisional

Probab=99.45  E-value=1e-12  Score=126.00  Aligned_cols=147  Identities=16%  Similarity=0.163  Sum_probs=122.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      .+++|.+..+.+++.+.+.++..+++++.|++.||+|||+.. .+..+..++.. +....++.+.++++.++.|++.+..
T Consensus       233 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~  311 (390)
T PRK03545        233 QQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI  311 (390)
T ss_pred             HHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence            556889999999999999999999999999999999988754 44444444433 3455678888888999999988777


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .+.....+.+..| ++|++++++++....+|..+||+++|.+.+++|++..|++.+++.++..+..+...
T Consensus       312 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  380 (390)
T PRK03545        312 GLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF  380 (390)
T ss_pred             hHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence            7777788888876 57999999999999999999999999999999999999999988877777766655

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.44  E-value=8.2e-13  Score=128.63  Aligned_cols=147  Identities=21%  Similarity=0.239  Sum_probs=135.1

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      ++++|.++...|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..+++++.+..++.-++.|++.....
T Consensus       246 ~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~  325 (524)
T PF05977_consen  246 RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIAN  325 (524)
T ss_pred             HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      +...+.+.+..|++.|||.++++++....+..+|..+.|.+.+.+|.+..+.+.++..++..++...
T Consensus       326 ~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~  392 (524)
T PF05977_consen  326 SSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR  392 (524)
T ss_pred             HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999998887765555554443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.43  E-value=1.9e-13  Score=133.11  Aligned_cols=146  Identities=15%  Similarity=0.186  Sum_probs=123.2

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc--CCchhHH--HHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIG--VGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      +++.+++|.+..+.+++.++..++..+++++.|+++||.  ++|+...  .+.++.+++.++..+.++++.+++.+++.|
T Consensus       265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G  344 (455)
T TIGR00892       265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG  344 (455)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence            555677899999999999999999999999999999984  3343333  334444555666677889999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHH
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV  207 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~  207 (503)
                      ++.+...+...+++.|.+|++++++.+++++....+|.++||.+++.+.+.. +|++.|++.+++.++..+
T Consensus       345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~  415 (455)
T TIGR00892       345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL  415 (455)
T ss_pred             HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence            9999899999999999999999999999999999999999999999999877 599999999887665544

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=99.42  E-value=4.6e-12  Score=117.55  Aligned_cols=188  Identities=10%  Similarity=0.011  Sum_probs=142.7

Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch
Q 010692          274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS  353 (503)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~  353 (503)
                      ..+.+..+++.+++...+.+...+.+.....+.+++--++++..+.+..-.........+.++.-++.+++.+|+|+-  
T Consensus       359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv--  436 (618)
T KOG3762|consen  359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV--  436 (618)
T ss_pred             HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--
Confidence            344555566777777666665555666655566666557777554443222334555677788888999999999998  


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          354 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                         +++.+++....+-++......++|..+.+=.+-+...+..+....+++....||+.+.++.|+.......+|-.+|.
T Consensus       437 ---~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs  513 (618)
T KOG3762|consen  437 ---NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS  513 (618)
T ss_pred             ---ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence               77777777777777777778899999999999999999999999999999999999999999999888877999999


Q ss_pred             hhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 010692          434 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG  467 (503)
Q Consensus       434 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  467 (503)
                      +++|.+.+.+| -+..|..+++.+++..++....
T Consensus       514 lIGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~i  546 (618)
T KOG3762|consen  514 LIGGFVVERFG-ARTTFRIFGIACLVTLALFISI  546 (618)
T ss_pred             hhhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988 4567777666655555544443

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.42  E-value=2.1e-12  Score=123.28  Aligned_cols=146  Identities=10%  Similarity=0.080  Sum_probs=122.0

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA  141 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~  141 (503)
                      |...++.|.+.++.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+...  + ........++.|++..
T Consensus       224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~  300 (381)
T PRK03633        224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF  300 (381)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence            444566789998999999999999999999999999999999999888888877665443  2 2344457788888877


Q ss_pred             hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692          142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      ...|...+.+.|..|+++++...+.+....++|..+||.++|++.++.||++.|++.+.+.++..+..+
T Consensus       301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~  369 (381)
T PRK03633        301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL  369 (381)
T ss_pred             hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence            788999999999999888888888888899999999999999999999999999998887765554443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.41  E-value=7.2e-13  Score=129.95  Aligned_cols=148  Identities=12%  Similarity=0.011  Sum_probs=115.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG--CGSSFDFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~g~~~  142 (503)
                      ++++|.+..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++..+  ....++.+.+.+.+++.|++...
T Consensus       286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~  365 (467)
T PRK09556        286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFG  365 (467)
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Confidence            5779999999999999999999999999999999999998876655444443322  22345666777888888865433


Q ss_pred             hhhchhhhhhccCCCCCchhHHHHHHhHHhH-HHHHHHHHHHhhcC------------cchhHHHHHHHHHHHHHHHHHH
Q 010692          143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~------------~~gwr~~f~~~~~~~~~~~~~~  209 (503)
                      ..........|.+|+++||.+.|+.+....+ |..++|.+.|.+.+            ..||+..|++..+..++..+..
T Consensus       366 ~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  445 (467)
T PRK09556        366 PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM  445 (467)
T ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence            3333346677999999999999999988886 77999999999988            5789999999877766665554


Q ss_pred             Hhc
Q 010692          210 FVI  212 (503)
Q Consensus       210 ~~~  212 (503)
                      ++.
T Consensus       446 ~~~  448 (467)
T PRK09556        446 AIV  448 (467)
T ss_pred             HHH
Confidence            433

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.41  E-value=4.7e-13  Score=128.69  Aligned_cols=139  Identities=9%  Similarity=0.012  Sum_probs=113.7

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH--HHhhh--hhHHHHHHHHHHHHHhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G~g~  140 (503)
                      ++++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+..  +...+  .++.+.+++..++.|++.
T Consensus       247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  326 (394)
T TIGR00883       247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIG  326 (394)
T ss_pred             HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence            47788999999999999999999999999999999999998775555444333  12222  246777778889999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHH
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILML  203 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~  203 (503)
                      +...+...+++.|.+|+++|++++++ .+.+..+|..++|.+++.+.++.| |+..++...+..+
T Consensus       327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       327 GMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL  391 (394)
T ss_pred             HHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence            88999999999999999999999998 456677899999999999998888 8888777665443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.41  E-value=5.5e-12  Score=114.13  Aligned_cols=173  Identities=17%  Similarity=0.181  Sum_probs=143.0

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      .+.+....+.+..+++.--.+..-.|.+.++ ++++..+. .+.+...+..-++.++.|.++||.+.|     ..+..++
T Consensus        28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~gL  101 (448)
T COG2271          28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFGL  101 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHHH
Confidence            3455556666666667666677777766655 66887666 566888899999999999999999998     7888888


Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH--HHHHh
Q 010692          364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQD  441 (503)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--g~l~~  441 (503)
                      +++++..+++.+.++.+.+.++..+.+.+.+..+|+....+.+-+++++||+..++-|++.|+ |+.+.|++.  +++.+
T Consensus       102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~~  180 (448)
T COG2271         102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFAF  180 (448)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHHh
Confidence            888888888888888889999999999999999999999999999999999999999999999 777788888  88887


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          442 HVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       442 ~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +. +|+.+|++-+++.++..++.+
T Consensus       181 ~~-~w~~~f~~pgiiaiival~~~  203 (448)
T COG2271         181 HG-GWRAAFYFPGIIAIIVALILL  203 (448)
T ss_pred             cc-chhHHHHHHHHHHHHHHHHHH
Confidence            75 499999998887766655544

>PRK03699 putative transporter; Provisional

Probab=99.40  E-value=1.2e-12  Score=125.48  Aligned_cols=147  Identities=14%  Similarity=0.147  Sum_probs=125.8

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      ++++|++..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+...
T Consensus       233 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~  312 (394)
T PRK03699        233 QKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIY  312 (394)
T ss_pred             HHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999988888777777777777787777778888999888888


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      +...++..|..|. ++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+.+...
T Consensus       313 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  379 (394)
T PRK03699        313 TTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL  379 (394)
T ss_pred             HHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence            8878888887764 467888999999999999999999999999999999998888877766554444

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.40  E-value=1.9e-12  Score=123.98  Aligned_cols=154  Identities=12%  Similarity=0.105  Sum_probs=123.3

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGE  140 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~  140 (503)
                      |++.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+.  -++.|++.
T Consensus       229 p~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~  306 (393)
T PRK09705        229 PAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGL  306 (393)
T ss_pred             HHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhc
Confidence            444466899999999999999999999999999999999999999988888777766554322 222222  24568888


Q ss_pred             hhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          141 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      +...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |+..|++.++.+++..+....+.||++
T Consensus       307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (393)
T PRK09705        307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF  385 (393)
T ss_pred             cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence            7777777777777775 5689999999999999999999999999998776 888888888887777777677767644

>PRK10054 putative transporter; Provisional

Probab=99.39  E-value=8.5e-12  Score=119.42  Aligned_cols=169  Identities=9%  Similarity=0.009  Sum_probs=124.8

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      |.++.+.+..++...+......++|.|+++.+|.+.... ...+...++.+++.++.|+++||+|+|     +.+..+.+
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~   81 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT   81 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence            456666677777778888888899999998889887655 444566778888999999999999998     66655555


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      ...+..+.....++.+..+...++.+...+...+....+..+..|+++|+++.|+.+...++ |.+++|.+.+++.+ .+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~g  159 (395)
T PRK10054         82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-QS  159 (395)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-hc
Confidence            55555555555566555555545555554555566777888889899999999999988888 98999999998875 34


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 010692          445 NWRKTTLALTSIFFLAAG  462 (503)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~  462 (503)
                       |+..|...+++.++..+
T Consensus       160 -~~~~f~~~~~~~~i~~i  176 (395)
T PRK10054        160 -INLPFWLAAICSAFPLV  176 (395)
T ss_pred             -cCcHHHHHHHHHHHHHH
Confidence             77788776666555433

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.38  E-value=3.8e-12  Score=125.91  Aligned_cols=156  Identities=7%  Similarity=-0.097  Sum_probs=125.0

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----h------HHHHH
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----F------DFWSI  129 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~------~~~~l  129 (503)
                      .+.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.++.++.     +      +...+
T Consensus       307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (481)
T TIGR00879       307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI  386 (481)
T ss_pred             HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence            355567889988888999999999999999999999999999999999988888877776621     1      33333


Q ss_pred             HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Q 010692          130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~  209 (503)
                      ....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+.++.+|++.|++.++++++..++.
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~  466 (481)
T TIGR00879       387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV  466 (481)
T ss_pred             HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence            33333333333334566777889999999999999999999999999999999999888899999999998888888777


Q ss_pred             Hhccccc
Q 010692          210 FVIKPLQ  216 (503)
Q Consensus       210 ~~~~p~~  216 (503)
                      +++.||.
T Consensus       467 ~~~~~~~  473 (481)
T TIGR00879       467 YFFLPET  473 (481)
T ss_pred             heecccC
Confidence            7766653

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00897 2A0118 polyol permease family

Probab=99.38  E-value=5.8e-12  Score=121.15  Aligned_cols=149  Identities=15%  Similarity=0.078  Sum_probs=118.5

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH-HHHHHHHHHHHHhhh-----hhHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGS-----SFDFWSIAICRML  135 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l  135 (503)
                      |.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+     .++.+.+++..++
T Consensus       246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  325 (402)
T TIGR00897       246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA  325 (402)
T ss_pred             HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence            4445778999999999999999999999999999999999988764 333334443333332     2466777788899


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      .|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++..++..+.
T Consensus       326 ~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       326 LGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             HHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence            9988876655 4556677655 5799999999999999999999999999999999999999998887777666554

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.37  E-value=3.2e-12  Score=123.01  Aligned_cols=146  Identities=14%  Similarity=-0.012  Sum_probs=112.4

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch--hH------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR--LI------GVGLSVWTFATAGCGSSFDFWSIAICRMLV  136 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l------~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  136 (503)
                      .+++|.+..+.+++.+...++..++.++.|++.||+|||+  ..      ..+.++..+........++.+..+....+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (399)
T TIGR00893       243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALG  322 (399)
T ss_pred             HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence            5668889999999999999999999999999999999996  11      111111222222222233455555455555


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHh
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~  211 (503)
                      +.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+..|++.+++.++..+..++
T Consensus       323 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  397 (399)
T TIGR00893       323 FFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL  397 (399)
T ss_pred             Hhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence            55555 788899999999999999999999999999999999999999999888 999999988877766665543

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.36  E-value=3.1e-11  Score=117.29  Aligned_cols=167  Identities=16%  Similarity=0.188  Sum_probs=125.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      +.++...+.+++.......+..+.|.+.++ ++.+..+. .+.+...++..++.++.|++.||+|+|     +.+..+.+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~   96 (434)
T PRK11663         23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI   96 (434)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence            334444444555555555667788888766 77776554 555777888899999999999999998     66666666


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +..+..++....++.+......++.+++.+..++....++.+.+|+++|++++|+.+...++ |.+++|.+.+++.+..|
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g  175 (434)
T PRK11663         97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG  175 (434)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence            66666655555566666666666667777777788888889999889999999999888877 88999999999998876


Q ss_pred             hHHHHHHHHHHHHHHH
Q 010692          445 NWRKTTLALTSIFFLA  460 (503)
Q Consensus       445 ~~~~~~~~~~~~~~~~  460 (503)
                       |+..|.+.+++.++.
T Consensus       176 -w~~~f~~~~i~~~~~  190 (434)
T PRK11663        176 -WRYGMMIAGIIAIVV  190 (434)
T ss_pred             -HHHHHHHHHHHHHHH
Confidence             888888776654443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.36  E-value=9.4e-12  Score=118.86  Aligned_cols=141  Identities=16%  Similarity=0.094  Sum_probs=122.3

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      ..+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.+++.+.+++..++.|++.+..
T Consensus       231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  310 (382)
T PRK11128        231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC  310 (382)
T ss_pred             HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999998888888999999999999999999988


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA  206 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~  206 (503)
                      .+....++.+. +++++++..+..+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++..
T Consensus       311 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~  372 (382)
T PRK11128        311 HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL  372 (382)
T ss_pred             HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence            88888888887 5566788888886 56678889999999999999888 56777766655443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.35  E-value=5.3e-12  Score=121.27  Aligned_cols=143  Identities=8%  Similarity=0.046  Sum_probs=124.5

Q ss_pred             CCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchh
Q 010692           69 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA  148 (503)
Q Consensus        69 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~  148 (503)
                      +.+..+.|.+.+...+...++.+..|++.||+|+|+.+.++.++.+++..+.+.++|.+.+++.+++.|++.........
T Consensus       250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  329 (396)
T TIGR00882       250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF  329 (396)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            45556788999999999999999999999999999999999999999888888889999999999999999877766777


Q ss_pred             hhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          149 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       149 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      .++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|++.+++.++..+...+
T Consensus       330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~  393 (396)
T TIGR00882       330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF  393 (396)
T ss_pred             HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            788888888888877766 678899999999999999999899999999999888777766544

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.33  E-value=2e-11  Score=119.28  Aligned_cols=171  Identities=11%  Similarity=-0.059  Sum_probs=128.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhh--cccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA  361 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~  361 (503)
                      +.++.+.+..++...++++...++|.|+++.  .|.+.... .+.....++..++.+++|+++|| +|||     +.+..
T Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~   84 (475)
T TIGR00924        10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL   84 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence            4455556666677788888999999999886  77776544 55567778889999999999999 8998     67766


Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHH
Q 010692          362 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV  438 (503)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~  438 (503)
                      +.++..+..++....++.+.......+.+.+.+...+....+..+.+|++   .|+++.++.+...++ |.+++|.+.|+
T Consensus        85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~  163 (475)
T TIGR00924        85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV  163 (475)
T ss_pred             HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence            66666655555554445555555555666666667777888888888764   488899999988898 99999999999


Q ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          439 LQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       439 l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      +.+..| |+..|...++..+++.+.
T Consensus       164 l~~~~g-~~~~f~~~~~~~~~~~l~  187 (475)
T TIGR00924       164 IAENYG-YHVGFNLAAVGMVIGLLT  187 (475)
T ss_pred             HHHhcC-hHHHHHHHHHHHHHHHHH
Confidence            998876 888888876555444333

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.33  E-value=9.1e-12  Score=118.42  Aligned_cols=163  Identities=9%  Similarity=-0.029  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692          292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC  370 (503)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~  370 (503)
                      ....++...........+|.|..+. +.++... .+.+...++..++.++.|+++||+|||     +.+..+..+.....
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~   78 (365)
T TIGR00900         5 FAAQLISLIGTAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLV   78 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHH
Confidence            3444555555555666677777764 4554433 555677788899999999999999998     66666555544444


Q ss_pred             HHHHHhh-----hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692          371 LTAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN  445 (503)
Q Consensus       371 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~  445 (503)
                      .......     +.+...+..++.+.+.+...+....++.+..|+++|+++.++.+....+ |.+++|.+.+++.+..| 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g-  156 (365)
T TIGR00900        79 AVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG-  156 (365)
T ss_pred             HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-
Confidence            4443334     6666677777777877788888889999999999999999999888777 88999999999988776 


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010692          446 WRKTTLALTSIFFLAAG  462 (503)
Q Consensus       446 ~~~~~~~~~~~~~~~~~  462 (503)
                      |+..+++.++..++..+
T Consensus       157 ~~~~~~~~~~~~~~~~~  173 (365)
T TIGR00900       157 IKWAIWVDAVGFAISAL  173 (365)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77777776655444433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.32  E-value=4.5e-11  Score=115.01  Aligned_cols=174  Identities=13%  Similarity=0.011  Sum_probs=121.3

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcc-cccchhhHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA  362 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~  362 (503)
                      .+.++......+...+.++++..++|.|+++..|.++... .+.........++.+++|+++||+ |||     +.+..+
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG   82 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG   82 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence            3455666666677777888899999999998888886554 444566677788899999999998 998     666555


Q ss_pred             HHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          363 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       363 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      .++..+..++..... +.........+...+.+...+....++.+.+|++  .|+++.++.+...++ |+.++|.+.|++
T Consensus        83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L  161 (493)
T PRK15462         83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA  161 (493)
T ss_pred             HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence            555544433332221 1122222233333444455566778888989875  799999999999997 999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          440 QDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       440 ~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .+..| |+..|...++..+++.+.+.
T Consensus       162 ~~~~G-w~~~F~iaaigm~l~li~~~  186 (493)
T PRK15462        162 QEEYS-WAMGFGLAAVGMIAGLVIFL  186 (493)
T ss_pred             HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence            98876 88888876655544444433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.32  E-value=5.7e-12  Score=121.72  Aligned_cols=134  Identities=13%  Similarity=0.116  Sum_probs=113.6

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      .+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++..+.++..+ +....++.+.+.+..++.|++.+..
T Consensus       266 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (405)
T TIGR00891       266 KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGI  345 (405)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccc
Confidence            567899999999999999999999999999999999999998888776533332 3334466777777778888777777


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHH
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGE  198 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~  198 (503)
                      .+...+++.|.+|+++|++++|+.+....+|..++|++++.+.++.| |+..+...
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~  401 (405)
T TIGR00891       346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL  401 (405)
T ss_pred             hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence            78888999999999999999999999999999999999999999888 87766553

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.32  E-value=2.3e-11  Score=111.54  Aligned_cols=150  Identities=17%  Similarity=0.088  Sum_probs=125.5

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGE  140 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~  140 (503)
                      |-+++..|.+.+.++++.-+|.++..++.++.|++.|| +.|+.+.....+.++..+...+. ++.+..++.-++.|++.
T Consensus       236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~  314 (394)
T COG2814         236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF  314 (394)
T ss_pred             HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence            44477889999999999999999999999999999999 99999888877777777766554 55666666777777777


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      +.........+++ ..++++..+.+++...+++|..+|..+||.+.+++|+....++.+++.++..++.+...
T Consensus       315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~  386 (394)
T COG2814         315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA  386 (394)
T ss_pred             hhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666666666 34567999999999999999999999999999999999999999998887777766554

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.30  E-value=7.5e-11  Score=114.77  Aligned_cols=173  Identities=17%  Similarity=0.132  Sum_probs=113.7

Q ss_pred             hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH
Q 010692          284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA  362 (503)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~  362 (503)
                      +++.++...+...........+....|.+ ++ .+.++.+. ...+...++..++.++.|++.||+++|     +.+..+
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~   97 (438)
T TIGR00712        25 RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAG   97 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHH
Confidence            34444444444444444444455566644 44 37776555 455677788999999999999999998     555444


Q ss_pred             HHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHH
Q 010692          363 TFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV  438 (503)
Q Consensus       363 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~  438 (503)
                      .++..+..+.....    .+.+...+..++.+++.+..+++....+.+.+|+++|+++.|+.+..... |..++|.+.+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~  176 (438)
T TIGR00712        98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLL  176 (438)
T ss_pred             HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHH
Confidence            44444333332221    23334444555666666667777778888889999999999999888777 77778877776


Q ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692          439 LQDHVNNWRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       439 l~~~~g~~~~~~~~~~~~~~~~~~~~  464 (503)
                      ..+...+|+..|++.+++.++..+..
T Consensus       177 ~~~~~~~w~~~f~~~~~~~~i~~~~~  202 (438)
T TIGR00712       177 GMAWFNDWHAALYFPAICAIIVALFA  202 (438)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            65544458888888777665544433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.29  E-value=2.2e-11  Score=120.28  Aligned_cols=155  Identities=8%  Similarity=-0.032  Sum_probs=119.9

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HH-H-HHHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DF-W-SIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~l~~~r~l~G  137 (503)
                      |.+.+++|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+...  +. + ....+-++.+
T Consensus       295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~  374 (479)
T PRK10077        295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV  374 (479)
T ss_pred             HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence            555677888877777777788889999999999999999999999999999998887776442  11 1 2223344444


Q ss_pred             hhhhh-hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh------cCcchhHHHHHHHHHHHHHHHHHHH
Q 010692          138 VGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       138 ~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      .+.+. ..+....++.|.+|+++|++++++......+|.++++.+.+.+      .+..+|++.|++.++++++..++.+
T Consensus       375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  454 (479)
T PRK10077        375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW  454 (479)
T ss_pred             HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence            44443 3366789999999999999999999999999998886665543      4567899999999988888877777


Q ss_pred             hccccc
Q 010692          211 VIKPLQ  216 (503)
Q Consensus       211 ~~~p~~  216 (503)
                      ++.||+
T Consensus       455 ~~~~e~  460 (479)
T PRK10077        455 KFVPET  460 (479)
T ss_pred             hccccC
Confidence            776664

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.27  E-value=8.4e-11  Score=112.79  Aligned_cols=164  Identities=14%  Similarity=0.066  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      .....++...+.+....++|.++++..+.++... .......+...+..++.|+++||+++|     +.+..+..+....
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~~~   89 (400)
T PRK11646         15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRAAG   89 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHHHH
Confidence            3455666677777778888888888888886555 333555667777789999999999998     7777777666666


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692          370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT  449 (503)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~  449 (503)
                      .+.....++.+...+..++.+.+.+...++....+.+..|+++|+++.|+.+...+. |..++|.+.|++. ..| |+..
T Consensus        90 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~-~~g-~~~~  166 (400)
T PRK11646         90 FATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLL-QYD-FRLV  166 (400)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hhh-HHHH
Confidence            666655566666666666666666666677788888999999999999999888888 9999999999998 444 7777


Q ss_pred             HHHHHHHHHHHHH
Q 010692          450 TLALTSIFFLAAG  462 (503)
Q Consensus       450 ~~~~~~~~~~~~~  462 (503)
                      |++.+...++..+
T Consensus       167 f~~~~~~~~~~~i  179 (400)
T PRK11646        167 CATGAVLFVLAAA  179 (400)
T ss_pred             HHHHHHHHHHHHH
Confidence            7776665554433

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=99.26  E-value=4.5e-09  Score=97.12  Aligned_cols=321  Identities=15%  Similarity=0.050  Sum_probs=176.8

Q ss_pred             chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692           74 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD  153 (503)
Q Consensus        74 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~  153 (503)
                      -.+.+.-+-.+...+.-+.+.++.+|+..+.=.....++..++.++.++++|.+.=+++-++.+++.|........+.. 
T Consensus        60 ~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-  138 (402)
T PF02487_consen   60 STGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-  138 (402)
T ss_pred             cchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence            3455666777778888888889999987665566777788889999999999999999999999999988877777644 


Q ss_pred             cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccc
Q 010692          154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV  231 (503)
Q Consensus       154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  231 (503)
                      .+++    ...+-+.++.+.+.++|+..-..+.. .|  -|..+++...+.++..+..++.+|.........+.+...  
T Consensus       139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~--  211 (402)
T PF02487_consen  139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED--  211 (402)
T ss_pred             hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC--
Confidence            5543    35788888888888888887666655 44  477888877776666666566665422111000000000  


Q ss_pred             cccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhh-cccc
Q 010692          232 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGP  310 (503)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  310 (503)
                           .    .+++...++..+    .+.+...+    ...++.++..+.++     + .++-.+..++..+.++ -..|
T Consensus       212 -----~----~~~~~~~~~~~~----~~~~~~~~----~~~~~k~~~~k~Ll-----~-ymiPL~lVY~aEY~InqGv~~  268 (402)
T PF02487_consen  212 -----E----AEDDLLESETSE----SKPDSSSK----LSFKEKLKRLKPLL-----W-YMIPLFLVYFAEYFINQGVAP  268 (402)
T ss_pred             -----c----cccccccccccc----ccccccch----hhHHHHHHHHHHHH-----H-HHHHHHHHHHHHHHHHhchHH
Confidence                 0    000000000000    00000000    01111111122222     2 2222233333333322 1222


Q ss_pred             chhhhhcccchh-hH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHH
Q 010692          311 KAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT---AFCLSSLYGFLAL  385 (503)
Q Consensus       311 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  385 (503)
                      .........++. .. .+...+.++..+++--..++  |+  |+  . .++...-.+-.+.+++   ..+.++.|..++.
T Consensus       269 tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~--l-wils~LQ~~nl~~~~l~s~~~fipsi~ivf~l  341 (402)
T PF02487_consen  269 TLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RR--L-WILSLLQVINLVFLLLQSWYRFIPSIWIVFVL  341 (402)
T ss_pred             HhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hh--H-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            222221122222 22 44455666655554432221  12  21  0 2221111111111111   1223566777777


Q ss_pred             HHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          386 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      ++.-|...|..+...+..+.++.++++|..++|.....-.. |..++.
T Consensus       342 if~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~-GI~lAg  388 (402)
T PF02487_consen  342 IFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSL-GILLAG  388 (402)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhH-HHHHHH
Confidence            77788888888888899999999999999999998655444 655544

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.26  E-value=2.6e-11  Score=114.64  Aligned_cols=162  Identities=16%  Similarity=0.139  Sum_probs=121.4

Q ss_pred             HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692          295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA  373 (503)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (503)
                      .++............|.++.+.++.++... .+.+...++..++.++.|+++||+|||     +.+..+.++..+..+..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~   79 (352)
T PF07690_consen    5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLLL   79 (352)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHHh
Confidence            444455555556666656666677776554 555677788999999999999999998     66666666655553333


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                      ...++.+..++..++.+.+.+...+....++.+.+|+++|+++.++.+....+ |.+++|.+.+.+.+..+ |+..+++.
T Consensus        80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~~~  157 (352)
T PF07690_consen   80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFLIS  157 (352)
T ss_dssp             HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHHHH
T ss_pred             hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-cccccccc
Confidence            33355567777778888888888889999999999999999999999888888 99999999999987766 77788887


Q ss_pred             HHHHHHHHHH
Q 010692          454 TSIFFLAAGI  463 (503)
Q Consensus       454 ~~~~~~~~~~  463 (503)
                      +++.++..++
T Consensus       158 ~~~~~~~~il  167 (352)
T PF07690_consen  158 AILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHHH
T ss_pred             cchhhhhhhh
Confidence            7776666553

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.26  E-value=1.6e-11  Score=119.93  Aligned_cols=149  Identities=9%  Similarity=-0.070  Sum_probs=106.6

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc--CCchhH-HHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLI-GVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVG  139 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~g  139 (503)
                      ++++|.+..+.++..+.+.++..++.+++|+++||+  |||+.. +....+..++.++..+  ..+.+...++.++.|.+
T Consensus       281 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  360 (452)
T PRK11273        281 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFL  360 (452)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHH
Confidence            455788888999999999999999999999999999  555432 2222333333333222  23444444555555554


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH-HHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.+..||+..|++.++.+++..+....+.
T Consensus       361 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~  435 (452)
T PRK11273        361 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  435 (452)
T ss_pred             HHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence            3322333345678999999999999999988888765 4899999999999999999998887777766665544

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.25  E-value=1.9e-10  Score=113.06  Aligned_cols=176  Identities=11%  Similarity=-0.043  Sum_probs=120.1

Q ss_pred             Hhhhh-hHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHH
Q 010692          282 LLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL  358 (503)
Q Consensus       282 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~  358 (503)
                      .+++| .++..+...++....++.+..+++.|+++.+|.+.... ..............+++|++.|| +|||     +.
T Consensus        16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~   90 (500)
T PRK09584         16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RV   90 (500)
T ss_pred             hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HH
Confidence            34555 47777777788888888899999999999899886544 32223333333344689999999 5998     66


Q ss_pred             HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhh
Q 010692          359 LSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPL  435 (503)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~  435 (503)
                      +..+.++..+...+..... ..+.......+.+.+.+...+....+..+.+|++  .++.+.++.+...++ |.+++|.+
T Consensus        91 ~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~i  169 (500)
T PRK09584         91 IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSMLA  169 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHHH
Confidence            6655555554444433332 3333334445556666666677778888888764  345678888888888 99999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692          436 VGVLQDHVNNWRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       436 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  464 (503)
                      .|++.+..| |+..|.+.++...++.+.+
T Consensus       170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~  197 (500)
T PRK09584        170 TPWLAAKYG-WSVAFALSVVGMLITVVNF  197 (500)
T ss_pred             HHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence            999999877 8888888766555554433

>PRK09952 shikimate transporter; Provisional

Probab=99.24  E-value=5.2e-11  Score=115.71  Aligned_cols=148  Identities=14%  Similarity=0.072  Sum_probs=111.8

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh---h-hHHHHHHHHHHHHHhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---S-FDFWSIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G~g~  140 (503)
                      .+++|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+....   . ++.+.+++..++.|++.
T Consensus       278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  357 (438)
T PRK09952        278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH  357 (438)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence            5678888776666666667777888999999999999999988887766555443322   1 23445555667778888


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHHHHHHhc
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      +...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+..  +|+..+...++..++..+..+..
T Consensus       358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~  432 (438)
T PRK09952        358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM  432 (438)
T ss_pred             HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence            8888888999999999999998888854 445589999999999987633  48888888877777666655443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.24  E-value=3.7e-11  Score=117.87  Aligned_cols=147  Identities=10%  Similarity=-0.023  Sum_probs=107.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-------hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-------LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      .+++|.+..+.+.+.+++.++..++.+++|+++||+|||+       .+.+..++.++..++.+..++.+...+.-++.+
T Consensus       280 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~  359 (476)
T PLN00028        280 YDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFS  359 (476)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999998752       333333444444445555666666666666777


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ++.+...+...+++.+..| ++||.+.|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++..
T Consensus       360 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~  433 (476)
T PLN00028        360 IFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH  433 (476)
T ss_pred             HHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence            7666565666667777655 57999999998888788877776654 22345799999999888777766665554

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.24  E-value=1.6e-10  Score=113.02  Aligned_cols=172  Identities=12%  Similarity=-0.011  Sum_probs=123.7

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA  362 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~  362 (503)
                      .+.++..+...+...+.++++..+++.|+++..|.+.... ...........+..+++|+++|| +|||     +.+..+
T Consensus        13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g   87 (489)
T PRK10207         13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG   87 (489)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence            3556666666677778888899999999999888886544 33344444555566789999999 9999     777666


Q ss_pred             HHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          363 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       363 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      .++..+..+......+ .....+...+.+.+.+...+....++.+.+|++  +|+.+.++.+...++ |..++|.+.|++
T Consensus        88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l  166 (489)
T PRK10207         88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI  166 (489)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence            6666555544444333 222334455566666777788888999999886  457789999888888 999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          440 QDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       440 ~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      .+..| |+..|++.++..+++.+.
T Consensus       167 ~~~~g-w~~~F~i~~i~~~~~~~~  189 (489)
T PRK10207        167 ADKFG-YSVTYNLCGAGLIIALLV  189 (489)
T ss_pred             HHhhC-hHHHHHHHHHHHHHHHHH
Confidence            99887 888888765544444333

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.22  E-value=2.1e-10  Score=110.01  Aligned_cols=156  Identities=15%  Similarity=0.057  Sum_probs=115.6

Q ss_pred             HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692          300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS  378 (503)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (503)
                      ..........|.+.+ .++.++... ...+...++..++.++.|++.||+|||     +.+..+.++..+..+.....++
T Consensus        19 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~   92 (385)
T TIGR00710        19 LGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNN   92 (385)
T ss_pred             HHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence            334444445565544 467775544 555677788899999999999999998     6776666666666555555666


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF  458 (503)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~  458 (503)
                      .+...+..++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+++.+
T Consensus        93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~  170 (385)
T TIGR00710        93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGI  170 (385)
T ss_pred             HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence            666666777777777777788888899999999999999999888777 88889999999988766 7777777666554


Q ss_pred             HHHHH
Q 010692          459 LAAGI  463 (503)
Q Consensus       459 ~~~~~  463 (503)
                      +..+.
T Consensus       171 ~~~~~  175 (385)
T TIGR00710       171 LLSAL  175 (385)
T ss_pred             HHHHH
Confidence            44433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK10504 putative transporter; Provisional

Probab=99.22  E-value=2.1e-10  Score=112.98  Aligned_cols=170  Identities=14%  Similarity=0.097  Sum_probs=126.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      +.++...+..++.......+..+.|.+.++ +|.++... ...+...++..++.++.|+++||+|||     +.+..+..
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~   83 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV   83 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence            456666676777777777778889988876 67776554 444566677788999999999999998     56555544


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +.....+.....++.+.+++..++.+++.+...+.....+.+.+|+++|+++.|+.+...++ |..++|.+.|.+.+..|
T Consensus        84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g  162 (471)
T PRK10504         84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS  162 (471)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence            44444444444456666666677777777777777788888989889999999999877777 88899999999999876


Q ss_pred             hHHHHHHHHHHHHHHHHHH
Q 010692          445 NWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~~  463 (503)
                       |+..|.+...+..+..+.
T Consensus       163 -w~~~f~~~~~~~~l~~~~  180 (471)
T PRK10504        163 -WHWIFLINIPVGIIGAIA  180 (471)
T ss_pred             -HHHHHHHHHHHHHHHHHH
Confidence             888888766555444433

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=99.22  E-value=6e-10  Score=96.71  Aligned_cols=160  Identities=11%  Similarity=0.058  Sum_probs=124.5

Q ss_pred             cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-------h
Q 010692           52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------F  124 (503)
Q Consensus        52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~  124 (503)
                      ......+.+-|++++.+|+|.+|...+.++..+|..+ .++.|.+.|++|++.++.+|.+...+|..+...+       .
T Consensus        16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~   94 (250)
T PF06813_consen   16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL   94 (250)
T ss_pred             CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence            3444456666788999999999999999999999987 5889999999999999999999999999887664       4


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Q 010692          125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP  204 (503)
Q Consensus       125 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~  204 (503)
                      ++|.+.+..++.|.+.+.....+.....+.||+ +||.+.|+.-...+++..+-..+...+.+.-.-+..+.+...+.++
T Consensus        95 ~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v  173 (250)
T PF06813_consen   95 PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVV  173 (250)
T ss_pred             chHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence            688898888999888877767776777788885 6999999999999999988777776665543344444444444444


Q ss_pred             HHHHHHhcc
Q 010692          205 FAVLAFVIK  213 (503)
Q Consensus       205 ~~~~~~~~~  213 (503)
                      ..+..++..
T Consensus       174 ~l~~~~~vr  182 (250)
T PF06813_consen  174 CLVAMFFVR  182 (250)
T ss_pred             HHHHhhhee
Confidence            444444433

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.22  E-value=7.7e-11  Score=115.81  Aligned_cols=148  Identities=9%  Similarity=0.044  Sum_probs=119.1

Q ss_pred             ccccCCCccchhhHHH-HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhh-hHHHHHHHHHHHHHhh
Q 010692           65 RGDFKLNNFQDGVLSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICRMLVGVG  139 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~G~g  139 (503)
                      .+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++.   +.. ++.+.+.+.-+++.++
T Consensus       250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~  329 (491)
T PRK11010        250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC  329 (491)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence            4678999999999874 6678999999999999999999998777666555544332   232 4555555566666666


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      .|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++..++..+.
T Consensus       330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~  402 (491)
T PRK11010        330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC  402 (491)
T ss_pred             HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            6666667788899999999999999999999999999999999999998999999999998888776666554

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.22  E-value=5.7e-11  Score=113.92  Aligned_cols=146  Identities=12%  Similarity=-0.065  Sum_probs=113.5

Q ss_pred             ccccccCCCccchhhHHHHHH-HHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHH
Q 010692           63 PKRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRML  135 (503)
Q Consensus        63 ~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l  135 (503)
                      ...+|.|.+++++|++..... ....++.++.|++.||+|+|+.+..+..+.++..+....      .++...++....+
T Consensus       233 ~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (390)
T TIGR02718       233 LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAF  312 (390)
T ss_pred             HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHH
Confidence            334678999999999988876 466778999999999999999988877766443333221      1233444555566


Q ss_pred             HHhhhhhhhhchhhhhhccCCC-CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692          136 VGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL  208 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~  208 (503)
                      .+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..++
T Consensus       313 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       313 GSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence            6777777777777887777766 789999999999999999999999999999899999999988776655443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.22  E-value=1.1e-08  Score=96.23  Aligned_cols=312  Identities=11%  Similarity=0.030  Sum_probs=182.7

Q ss_pred             chhhH-HHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhh
Q 010692           74 QDGVL-SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID  152 (503)
Q Consensus        74 ~~g~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~  152 (503)
                      ..|+. .++-...+.+.+++.+.+.|+.|.|+.++++...+....+.+-+ +|-+-+++.-.+.|+|.+..+..--.+++
T Consensus        50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt  128 (461)
T KOG3098|consen   50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLT  128 (461)
T ss_pred             CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehh
Confidence            34544 78888889999999999999999999999999999887776655 45667788999999999999999999999


Q ss_pred             ccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc--------chhH-H----------HHHHHHHHHHHHHHHHHhcc
Q 010692          153 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-Y----------AFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       153 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~gwr-~----------~f~~~~~~~~~~~~~~~~~~  213 (503)
                      |..+++.+.+..++.......+.++|...-..+...        .+-+ .          ...+.+++..+..+...-..
T Consensus       129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~  208 (461)
T KOG3098|consen  129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD  208 (461)
T ss_pred             hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence            999999999999999999999988887665443211        1111 1          11111111111111111111


Q ss_pred             ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692          214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      ..      +.+.....                     .+.. +             ....+.++...+++++++...+..
T Consensus       209 ~~------p~~~~~~~---------------------~~~~-~-------------~~~~~~l~~~~~l~~~~~ml~L~~  247 (461)
T KOG3098|consen  209 FL------PSKDVVNC---------------------KSSS-E-------------TSFSELLKLTFKLLKTPKMLLLFP  247 (461)
T ss_pred             ec------Cccchhhh---------------------hhhc-c-------------ccHHHHHHHHHHHhcCHhHHHHHH
Confidence            00      00000000                     0000 0             011112233445667777776666


Q ss_pred             HHHHHHHHhhhhhccccchhhhh--cccchhh--HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          294 GYIAYNFVIGAYSYWGPKAGYNI--YHMSNAD--MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      ..+..+..........|..+.-.  .+.+...  +......+++.+++....+.+.+|..+....  ..+.....+-...
T Consensus       248 ~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~  325 (461)
T KOG3098|consen  248 FFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIG  325 (461)
T ss_pred             HHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHH
Confidence            55444444333344444433222  2222222  2333455667777777777777765443211  3333333333333


Q ss_pred             HHHH-HHhh-----------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccccc
Q 010692          370 CLTA-FCLS-----------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP  431 (503)
Q Consensus       370 ~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~  431 (503)
                      +++. ...+                 +.....++.++.|+.-.......+.++...+ |+.|.++.++.-.-... +..+
T Consensus       326 ~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~-~s~v  403 (461)
T KOG3098|consen  326 FLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV-ASCV  403 (461)
T ss_pred             HHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH-HHHH
Confidence            2222 2111                 2335566667777777777777787877777 77888888887655444 5443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.21  E-value=8.6e-11  Score=113.35  Aligned_cols=148  Identities=16%  Similarity=0.211  Sum_probs=131.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc--hhHHHHHHHHHHHHHHhhh--------hhHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICRM  134 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~  134 (503)
                      .+++|++..+...+.-+..+..+++++++|++.||+|.|  ++++++++++.+..+...+        .++-+.+++.-+
T Consensus       309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~  388 (477)
T PF11700_consen  309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV  388 (477)
T ss_pred             HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence            568999999999999999999999999999999999999  8988888888666665555        678889999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhc
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      +.|+..|...+...++.+|..|+++.+..+|++....-....+||++.+.+.+..| -|+.+....++.++..++.++.
T Consensus       389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v  467 (477)
T PF11700_consen  389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV  467 (477)
T ss_pred             HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999988776 8888888877766666655443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.21  E-value=1.9e-10  Score=110.80  Aligned_cols=162  Identities=10%  Similarity=0.039  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692          292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC  370 (503)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~  370 (503)
                      .+.+.+.......+....| .+++.++.+..+. ...+...++..++.+..|++.||+|||     +.+..+.++..+..
T Consensus        14 ~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~~~~   87 (412)
T TIGR02332        14 FILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWGIAS   87 (412)
T ss_pred             HHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHHHHH
Confidence            3333433444444455555 5666788887665 555777888899999999999999998     77766666666666


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh-----hhh
Q 010692          371 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-----VNN  445 (503)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-----~g~  445 (503)
                      ++....++.+.+.+.-++.|++.+...+....++.+.+|+++|+++.|+.+..... |.++++.+.+++.+.     ..+
T Consensus        88 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~g  166 (412)
T TIGR02332        88 TATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLMALKG  166 (412)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCCccc
Confidence            65556667777777777778888777777777888889989999999999877777 888899998888752     124


Q ss_pred             HHHHHHHHHHHHHHH
Q 010692          446 WRKTTLALTSIFFLA  460 (503)
Q Consensus       446 ~~~~~~~~~~~~~~~  460 (503)
                      |+..|.+.++..++.
T Consensus       167 wr~~f~~~~~~~l~~  181 (412)
T TIGR02332       167 WQWLFLLEGFPSVIL  181 (412)
T ss_pred             hhHHHHHHHHHHHHH
Confidence            888888866665443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.21  E-value=1.7e-09  Score=91.54  Aligned_cols=316  Identities=11%  Similarity=0.072  Sum_probs=176.8

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      .+++.-+-+.++....++|.+.-+..-...+...+.|.++|+-|||+.-+.-++.+.+++ +.-.+++|-.++++|.+.|
T Consensus        57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGG  135 (454)
T KOG4332|consen   57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGG  135 (454)
T ss_pred             CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhh
Confidence            333355568889999999999888888888999999999999999997665555554443 3445788999999999999


Q ss_pred             hhhhhhhhchhhh-hhccCCCCCchhHHHHHH--------hHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHH
Q 010692          138 VGEASFISLAAPF-IDDNAPVPQKTAWLSMFY--------MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFA  206 (503)
Q Consensus       138 ~g~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~  206 (503)
                      +..+..+.+--++ +.|.-.  +|+.-.-+..        .+..+=.+++.+.+..+.+.+  |--.+|-..+.+..+..
T Consensus       136 iaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm  213 (454)
T KOG4332|consen  136 IATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM  213 (454)
T ss_pred             HHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence            9999887766665 556542  2332222221        122222333444444444433  33345544443322222


Q ss_pred             HHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhh
Q 010692          207 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK  286 (503)
Q Consensus       207 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (503)
                      .+.   +..+.+...+|.+.+..                                          .+.+....+.+..++
T Consensus       214 Avi---l~~W~ENygdps~~kdl------------------------------------------ltqf~gaa~aiaSD~  248 (454)
T KOG4332|consen  214 AVI---LSSWSENYGDPSENKDL------------------------------------------LTQFKGAARAIASDE  248 (454)
T ss_pred             HHH---HhhhhhccCChhhhHHH------------------------------------------HHHhhHhHHHHhcch
Confidence            222   23333333232222211                                          111113344555665


Q ss_pred             hHHHHHHHHHHH-HHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          287 VYVVNVLGYIAY-NFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       287 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      ++..+.-.-.++ ...+.....|.|..--+..+.+. . .+.+.+.+..++|+-+..++..|-..|..   ....+..++
T Consensus       249 ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPh-G-fiFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~v  323 (454)
T KOG4332|consen  249 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-G-FIFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLV  323 (454)
T ss_pred             HHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCc-h-hHHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHH
Confidence            555443333333 33333445577766544333331 2 22234455666666666666555443322   233333333


Q ss_pred             HHHHHHHHHHh-------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          366 GAISCLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       366 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      ....+.+....       .+....++.+++.-.+.+..+|.+.-+-.+.+|.+.|++.+-++..-.++
T Consensus       324 s~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni  391 (454)
T KOG4332|consen  324 SIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI  391 (454)
T ss_pred             HHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence            32222222221       13334466777778888899999999999999999998777665443343

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.20  E-value=6.3e-11  Score=113.26  Aligned_cols=159  Identities=16%  Similarity=0.121  Sum_probs=115.2

Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      ++.......+....|. +.+.++.+.... .+.+...++..++.++.|+++||+|||     +.+..+.++..+..++..
T Consensus         5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~   78 (379)
T TIGR00881         5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG   78 (379)
T ss_pred             hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence            3444445555666665 445577776554 555777888999999999999999999     666666666666666566


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchh-hHHHHHhhhhhHHHHHHHH
Q 010692          375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~  453 (503)
                      ..++.+..++..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|. +.+.+.+..+ |+..+++.
T Consensus        79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~  156 (379)
T TIGR00881        79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELYS-WHWVFIVP  156 (379)
T ss_pred             HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcCC-chhHHHHH
Confidence            6667777777777778877788888888999999999999999999877777 8888884 5555555544 77777766


Q ss_pred             HHHHHHHHH
Q 010692          454 TSIFFLAAG  462 (503)
Q Consensus       454 ~~~~~~~~~  462 (503)
                      +.+.++..+
T Consensus       157 ~~~~~~~~~  165 (379)
T TIGR00881       157 GIIAIIVSL  165 (379)
T ss_pred             HHHHHHHHH
Confidence            655444333

>PRK15075 citrate-proton symporter; Provisional

Probab=99.19  E-value=6.9e-11  Score=114.88  Aligned_cols=128  Identities=9%  Similarity=-0.017  Sum_probs=95.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH-h---hhhhHHHHHHHHHHHHHhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG-C---GSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~l~~~r~l~G~g~  140 (503)
                      ++.+|.+..+.++....+.++..++.+++|+++||+|||+++..+..+..+.... .   ...+++..+.+..++.|++.
T Consensus       266 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (434)
T PRK15075        266 KTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY  345 (434)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence            4457999888999999999999999999999999999999887765544332211 1   11234444445556667777


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcchhH
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWR  192 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr  192 (503)
                      +...+....++.|.+|+++|+.++++... +..++..++|.+.+++.+..|++
T Consensus       346 g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~  398 (434)
T PRK15075        346 GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK  398 (434)
T ss_pred             HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence            76666677889999999999999998644 44455778999999998887754

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.19  E-value=4.6e-10  Score=106.77  Aligned_cols=148  Identities=17%  Similarity=0.099  Sum_probs=107.3

Q ss_pred             hHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          287 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      .++...+..+........+..+.|.++++.++.++... .+.....++..++.++.|++.||+|||     +.+..+.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~   76 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLL   76 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHH
Confidence            34555565666666677778888877778889887665 555777889999999999999999998     666666666


Q ss_pred             HHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          366 GAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       366 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      ..+..+.....+ +.+..++..++.+.+. ....+...++.+..|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus        77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~  151 (366)
T TIGR00886        77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG  151 (366)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence            666555555555 6666655555555553 34456677888889889999999998766666 77767767666654

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.18  E-value=6.5e-10  Score=106.43  Aligned_cols=147  Identities=14%  Similarity=0.043  Sum_probs=113.6

Q ss_pred             hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692          304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF  382 (503)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (503)
                      .....+|.+.+ .++.++.+. ...+...++..++.++.|++.||+|||     +.+..+..+..+..+.....++.+.+
T Consensus        38 ~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l  111 (394)
T PRK10213         38 LPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLL  111 (394)
T ss_pred             HHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHH
Confidence            33345666555 467776554 444567788888999999999999998     77766666666665555556677777


Q ss_pred             HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF  458 (503)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~  458 (503)
                      ++.-++.+++.+...+....++.+.+|+++|+.+.++.....++ |..++|.+.+.+.+..| |+..|++.+++.+
T Consensus       112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~  185 (394)
T PRK10213        112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI-ALVIAAPLGSFLGELIG-WRNVFNAAAVMGV  185 (394)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Confidence            77777888888877888888889999999999999999887777 88999999999998876 8888877665443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.18  E-value=4e-10  Score=107.84  Aligned_cols=158  Identities=11%  Similarity=-0.032  Sum_probs=108.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      |.++...+..++............+.+..+ .+.++... .......+...+..++.|++.||++||     +++..+.+
T Consensus         3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~   76 (393)
T PRK11195          3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG   76 (393)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence            455666666666555444444444545444 44454333 455677788899999999999999999     66666655


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +..+..+......+.   +...++.+.+.+...|...+++.+.+|+++|++++|+.+..... |.++||.++|++.+.. 
T Consensus        77 ~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~-~~~~Gp~lgG~l~~~~-  151 (393)
T PRK11195         77 IKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIA-AILLGTVLGGALADPH-  151 (393)
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence            554443333332332   33445667777788888899999999999999999999877776 8899999999998853 


Q ss_pred             hHHHHHHHHHH
Q 010692          445 NWRKTTLALTS  455 (503)
Q Consensus       445 ~~~~~~~~~~~  455 (503)
                       +...+.+.+.
T Consensus       152 -~~~~~~i~~~  161 (393)
T PRK11195        152 -AEAALAVCAL  161 (393)
T ss_pred             -HHHHHHHHHH
Confidence             4444444433

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.18  E-value=2.8e-10  Score=109.83  Aligned_cols=147  Identities=12%  Similarity=-0.047  Sum_probs=117.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVG  139 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~g  139 (503)
                      .+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++..++.++..+.     ++.+.++++-++.|+|
T Consensus       243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g  322 (406)
T PRK15402        243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG  322 (406)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence            56789999999998888888999999999999999999999999988887777776654     3566677889999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      .+...+......... ++++||+..+..+....+|..+|+.+++.+.+..+|....+...+.+++..++...+
T Consensus       323 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (406)
T PRK15402        323 IGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF  394 (406)
T ss_pred             HHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            988777666655444 447899999999999999999999999999888787766666555555444443333

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.18  E-value=5.9e-10  Score=106.51  Aligned_cols=168  Identities=15%  Similarity=0.021  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF  364 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  364 (503)
                      +.++...+..+............+|.+.++ +|.+.... ...+...++..++.++.|++.||+|||     +.+..+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~   76 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA   76 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence            345555565666666666667777776554 67775544 555777889999999999999999998     77777766


Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +..+..++....++.+.+++.-++.+.+.+...+.....+.+..++++|+.+.+.......+ |..++|++.+++.+..+
T Consensus        77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g  155 (382)
T PRK10091         77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS  155 (382)
T ss_pred             HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence            66666666666677777777777777777766666667777878888899999998766666 88889999999988766


Q ss_pred             hHHHHHHHHHHHHHHHH
Q 010692          445 NWRKTTLALTSIFFLAA  461 (503)
Q Consensus       445 ~~~~~~~~~~~~~~~~~  461 (503)
                       |+..|.+.++..++..
T Consensus       156 -wr~~f~~~~~~~~~~~  171 (382)
T PRK10091        156 -WRYTFLLIAVFNIAVL  171 (382)
T ss_pred             -HHHHHHHHHHHHHHHH
Confidence             8888888776554443

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.18  E-value=2.2e-10  Score=111.85  Aligned_cols=121  Identities=17%  Similarity=0.125  Sum_probs=104.0

Q ss_pred             CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhhhchhh
Q 010692           71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAP  149 (503)
Q Consensus        71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~~~~~~~~~~  149 (503)
                      +..+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus       255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  334 (437)
T TIGR00792       255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA  334 (437)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677888888899999999999999999999999999998888888777665 46677778888999999988899999


Q ss_pred             hhhccCC-------CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692          150 FIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW  191 (503)
Q Consensus       150 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw  191 (503)
                      +++|..+       ++++|.+.++.+....+|..+++.+.+.+.+..||
T Consensus       335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY  383 (437)
T ss_pred             HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9998865       45679999999999999999999999988765554

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.17  E-value=5.1e-10  Score=107.51  Aligned_cols=161  Identities=15%  Similarity=0.064  Sum_probs=113.9

Q ss_pred             HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692          295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA  373 (503)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (503)
                      .+....+.......+|.+.++ .+.+.... ...+...++..++.++.|+++||+|||     +.+..+.....+.....
T Consensus        12 ~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~~~~   85 (392)
T PRK10473         12 VLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIASLLC   85 (392)
T ss_pred             HHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHHHHH
Confidence            344444444555667766655 66665544 445667778888999999999999998     66666665555555555


Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                      ...++.+......++.+.+.+...+....++.+.+|+++|+++.++.+..... +..++|.+.+.+.+..+ |+..+++.
T Consensus        86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~~~~  163 (392)
T PRK10473         86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLFYTM  163 (392)
T ss_pred             HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence            55555555555556666666666677788888999999999999999877777 77888988888877665 77777777


Q ss_pred             HHHHHHHHHH
Q 010692          454 TSIFFLAAGI  463 (503)
Q Consensus       454 ~~~~~~~~~~  463 (503)
                      +.+.++..++
T Consensus       164 ~~~~~i~~~~  173 (392)
T PRK10473        164 AAMGILVLLL  173 (392)
T ss_pred             HHHHHHHHHH
Confidence            6655544443

>TIGR00895 2A0115 benzoate transport

Probab=99.17  E-value=9.8e-11  Score=112.78  Aligned_cols=153  Identities=14%  Similarity=0.171  Sum_probs=112.3

Q ss_pred             HHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 010692          299 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS  377 (503)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (503)
                      ...........|.+.++ ++.++... .+.....++.+++.++.|++.||++||     +.+..+.++..+..++....+
T Consensus        30 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~  103 (398)
T TIGR00895        30 GYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALAT  103 (398)
T ss_pred             HHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHcc
Confidence            33344455566666554 67775444 445667788899999999999999988     666666655555555555556


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      +.+..++..++.+++.+...+....++.+..|+++|+++.++.+....+ |..++|.+.+++.+..| |+..+++.+++.
T Consensus       104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~  181 (398)
T TIGR00895       104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIAP  181 (398)
T ss_pred             chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhHH
Confidence            6666666677777777777888889999999889999999999877777 88889999999988776 767777665443


Q ss_pred             HH
Q 010692          458 FL  459 (503)
Q Consensus       458 ~~  459 (503)
                      .+
T Consensus       182 ~~  183 (398)
T TIGR00895       182 LL  183 (398)
T ss_pred             HH
Confidence            33

>PRK11043 putative transporter; Provisional

Probab=99.16  E-value=9.5e-10  Score=105.97  Aligned_cols=156  Identities=16%  Similarity=0.071  Sum_probs=108.3

Q ss_pred             Hhhhhhccccch--hhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 010692          301 VIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS  377 (503)
Q Consensus       301 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (503)
                      .+.....+.|.+  +++..+.++... ...++..++..++.++.|+++||++||     +.+..+..+..+..+.....+
T Consensus        18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~   92 (401)
T PRK11043         18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWVE   92 (401)
T ss_pred             HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHhc
Confidence            333444555544  445577776554 455677888899999999999999999     666665555555555444555


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      +.+...+..++.+.+.+...+.....+.+.+++++++...+..+..... +..++|.+.+++.+..| |+..++..+.+.
T Consensus        93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~  170 (401)
T PRK11043         93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAIT  170 (401)
T ss_pred             CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Confidence            6666655555655555555555566778888888888888888766666 77889999999998876 888787776665


Q ss_pred             HHHHHH
Q 010692          458 FLAAGI  463 (503)
Q Consensus       458 ~~~~~~  463 (503)
                      ++..+.
T Consensus       171 ~~~~~~  176 (401)
T PRK11043        171 LLLILP  176 (401)
T ss_pred             HHHHHH
Confidence            554443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.15  E-value=4.4e-10  Score=111.39  Aligned_cols=155  Identities=9%  Similarity=-0.077  Sum_probs=105.3

Q ss_pred             cccccccCCCccchhh------------HHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH----
Q 010692           62 TPKRGDFKLNNFQDGV------------LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD----  125 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~----  125 (503)
                      |.+.++.|.+..+.+.            ...+..++..++.++.+++.||+|||++++++..+.+++.++.++..+    
T Consensus       312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~  391 (502)
T TIGR00887       312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST  391 (502)
T ss_pred             HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            4445667776543221            233445566678889999999999999998888887777666654321    


Q ss_pred             HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc----------chhHHHH
Q 010692          126 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------LNWRYAF  195 (503)
Q Consensus       126 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~----------~gwr~~f  195 (503)
                      ...+...-+....+.....+....+.+|.+|.+.|++++++.+....+|.+++|.+.+.+.+.          .++...|
T Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  471 (502)
T TIGR00887       392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL  471 (502)
T ss_pred             hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence            111111111111222223455667789999999999999999999999999999999988763          3556788


Q ss_pred             HHHHHHHHHHHHHHHhcccccc
Q 010692          196 WGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      ++.+++.++..+. ++++||+.
T Consensus       472 ~i~~~~~~~~~i~-~~~lpEt~  492 (502)
T TIGR00887       472 EIFALFMFLGILF-TLLIPETK  492 (502)
T ss_pred             HHHHHHHHHHHHH-heEeccCC
Confidence            8888777766554 45557743

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.15  E-value=1.7e-10  Score=111.10  Aligned_cols=144  Identities=13%  Similarity=0.207  Sum_probs=106.9

Q ss_pred             ccccCCCccchhhHHHHH-HHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhh-hHHHHHHHHHH----H
Q 010692           65 RGDFKLNNFQDGVLSSAF-MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICRM----L  135 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~----l  135 (503)
                      .+++|+++++.+++.+.. .++..++.+++|++.||+|+|+.+..+..+..+..+..   ++. ++.+.+++.-+    .
T Consensus       237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~  316 (402)
T PRK11902        237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLC  316 (402)
T ss_pred             HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence            577899999999988665 45689999999999999999998877777666554433   343 45566555543    4


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      .|++.+...+....++.+.+|.++    .++.+...++|..+++.++|.+.+.+||+..|.+.++++++..++.+..
T Consensus       317 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~  389 (402)
T PRK11902        317 GGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM  389 (402)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            556666667777777777777554    4556666677887777789999999999999999998887766555433

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=99.15  E-value=2.9e-10  Score=103.85  Aligned_cols=126  Identities=17%  Similarity=0.178  Sum_probs=99.9

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCchhH-HHHHHHHHHHHHHhhhhhHH---------
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLI-GVGLSVWTFATAGCGSSFDF---------  126 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~~~~---------  126 (503)
                      ++++..++|++....+.+--+..+...+.+++.|..+|    ||||||.+ ..+.+..+++.++.+++.++         
T Consensus        55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~  134 (498)
T KOG0637|consen   55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER  134 (498)
T ss_pred             ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence            36667999999999999999999999999999999999    58987754 45555666777777776443         


Q ss_pred             --------HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchh-HHHHHHhHHhHHHHHHHHHHHhhc
Q 010692          127 --------WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVVG  186 (503)
Q Consensus       127 --------~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l~  186 (503)
                              ..++++--+.=++.-.....+-+++.|...++++.+ +++++.....+|..+|..+++++.
T Consensus       135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~  203 (498)
T KOG0637|consen  135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG  203 (498)
T ss_pred             cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence                    334455555556666788889999999998777666 999999999999999999988553

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.14  E-value=7.8e-10  Score=107.55  Aligned_cols=158  Identities=12%  Similarity=0.080  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA  367 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~  367 (503)
                      ....+..+.............|.+ ++.++.++... ...+...++..++.++.|++.||+|||     +.+..+.++..
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~~   94 (426)
T PRK12307         21 FSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAYS   94 (426)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHH
Confidence            333333444344444444455544 45577776544 555677788899999999999999999     77777776666


Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692          368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR  447 (503)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~  447 (503)
                      +..+.....++.+.+.+.-++.+++.+...+....++.+..|+++|+++.++......+ |.++++.+.+.+.+..+ |+
T Consensus        95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~~~l~~~l~~~~~-w~  172 (426)
T PRK12307         95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI-GNIIAAYFMPSFAEAYG-WR  172 (426)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH-HHHHHHHHHHHHcccCC-HH
Confidence            66666666677777777777888777777888888889999999999999998776666 88888888888877765 88


Q ss_pred             HHHHHHH
Q 010692          448 KTTLALT  454 (503)
Q Consensus       448 ~~~~~~~  454 (503)
                      ..+++..
T Consensus       173 ~~f~i~~  179 (426)
T PRK12307        173 AAFFVGL  179 (426)
T ss_pred             HHHHHHH
Confidence            7777643

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.14  E-value=8.3e-10  Score=109.05  Aligned_cols=166  Identities=15%  Similarity=0.121  Sum_probs=122.4

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA  367 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~  367 (503)
                      ....+..++...-...+..-+|.+..+ ++.+.... .....+.++...+.+..|+++||+|||     +.+..+..+..
T Consensus         9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~~   82 (495)
T PRK14995          9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLFG   82 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH
Confidence            344444555555566667778888665 66665443 555666777788889999999999999     77777777776


Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhccc-CCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhH
Q 010692          368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW  446 (503)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~  446 (503)
                      +..+.....++.+.+++.-.+.+.+.+...+.....+.+.+ |+++|+++.|+....... |..++|.+.|++.+..+ |
T Consensus        83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g-w  160 (495)
T PRK14995         83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY-W  160 (495)
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-h
Confidence            66666666677777777777777777766666666666665 568999999999887777 99999999999999876 8


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010692          447 RKTTLALTSIFFLAAG  462 (503)
Q Consensus       447 ~~~~~~~~~~~~~~~~  462 (503)
                      ++.|++...+.++..+
T Consensus       161 r~~f~i~~~~~~~~~~  176 (495)
T PRK14995        161 GSVFLINVPIVLVVMG  176 (495)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8888877655544433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.13  E-value=5.5e-08  Score=91.77  Aligned_cols=330  Identities=13%  Similarity=0.107  Sum_probs=180.5

Q ss_pred             hhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------h-------HHHHHHHHHHHHHhhh
Q 010692           76 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------F-------DFWSIAICRMLVGVGE  140 (503)
Q Consensus        76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~g~  140 (503)
                      +...-.-.+...+.++..|.+.||..|.+++..+++.--++..+.+..        +       -++.+++.-.+.|.-.
T Consensus        41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~  120 (432)
T PF06963_consen   41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE  120 (432)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence            344445556667788888999999999998877766544333332211        1       1222233333333222


Q ss_pred             h-hhhhchhhhhhccC------CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          141 A-SFISLAAPFIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       141 ~-~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      - .......++=.||.      +++.+.+..+...-.=.+.-+++|++.|.+....+.+....+.++..++..++-+++.
T Consensus       121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l  200 (432)
T PF06963_consen  121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLL  200 (432)
T ss_pred             HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 12223333445553      3344566777777777788999999999999888999888888888888877776665


Q ss_pred             ccccCCC---CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692          214 PLQLKGF---APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV  290 (503)
Q Consensus       214 p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (503)
                      ..-.+..   ..+++.+..+         . +.+    ++   +..+.+......+...+..+....+++..++++.+..
T Consensus       201 ~~VY~~~P~L~~~~~~~~~~---------~-~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfla  263 (432)
T PF06963_consen  201 ARVYNSVPALAVKKRSSESE---------S-SSD----EE---SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLA  263 (432)
T ss_pred             HHHHHhChHhcCCCCCcccc---------c-ccc----cc---ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHH
Confidence            2211110   0000000000         0 000    00   0000001111111112233444466777788887776


Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      .....+++.. .-++...+..|+... |.++... .+-+...+.++.|.++..++.+|+|..+.....  +..-..+...
T Consensus       264 s~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~--l~~q~~~L~~  339 (432)
T PF06963_consen  264 SFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWS--LWWQWVCLAL  339 (432)
T ss_pred             HHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHH--HHHHHHHHHH
Confidence            5554444444 444566666788776 7776544 333666778888999999999999976332111  1111111112


Q ss_pred             HHHHHHh-hh------HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692          370 CLTAFCL-SS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI  426 (503)
Q Consensus       370 ~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  426 (503)
                      +...... .+      ...++...++.-++.-..=-....+++|.+|+++||...|.-+...+.
T Consensus       340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l  403 (432)
T PF06963_consen  340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL  403 (432)
T ss_pred             HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence            2212221 21      122222222222333233335667788899999999999999887777

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.13  E-value=1.8e-10  Score=106.94  Aligned_cols=147  Identities=13%  Similarity=0.148  Sum_probs=131.2

Q ss_pred             CCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchh
Q 010692           69 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA  148 (503)
Q Consensus        69 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~  148 (503)
                      +.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..+.++=.+++++++|.+.+.+.+.+.|+-.+.......
T Consensus       255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f  334 (412)
T PF01306_consen  255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF  334 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          149 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       149 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      .|+++.+|++..++...+ .+.+.++|..+.+.++|.+.++.|.+..|++.+.+.++..++..+.+++
T Consensus       335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~  402 (412)
T PF01306_consen  335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK  402 (412)
T ss_dssp             HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence            999999999887777777 4789999999999999999999999999999999988888888888754

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.13  E-value=4.5e-10  Score=111.29  Aligned_cols=164  Identities=14%  Similarity=0.093  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692          291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      ..+..+.............|.+.++ ++.+.... .......++..++.++.|++.||+|||     +.+..+.++..+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~   80 (485)
T TIGR00711         7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG   80 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence            3344444445555566667776655 66665443 555777888999999999999999998     6776666666666


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692          370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT  449 (503)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~  449 (503)
                      .+.....++.+..++..++.+++.+...+....++.+.+|+++|+++.++....... |..++|.+.|++.+..+ |+..
T Consensus        81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~  158 (485)
T TIGR00711        81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI  158 (485)
T ss_pred             HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence            666666677777777777788877777888888999999999999999999877777 88999999999998776 7778


Q ss_pred             HHHHHHHHHHHHH
Q 010692          450 TLALTSIFFLAAG  462 (503)
Q Consensus       450 ~~~~~~~~~~~~~  462 (503)
                      |++.+.+.++..+
T Consensus       159 f~~~~~~~~~~~~  171 (485)
T TIGR00711       159 FLINVPIGIIVVV  171 (485)
T ss_pred             hhhhhHHHHHHHH
Confidence            8776655544443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=99.13  E-value=2.3e-07  Score=88.63  Aligned_cols=252  Identities=13%  Similarity=0.055  Sum_probs=152.8

Q ss_pred             cccccccCCC-----ccchhhHHHHHHHHHHHH-HhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----h-------
Q 010692           62 TPKRGDFKLN-----NFQDGVLSSAFMVGLLVA-SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F-------  124 (503)
Q Consensus        62 ~~i~~~~~~s-----~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~-------  124 (503)
                      .+++|.+.++     .+.+.++-+...+..++. .++.+++++|++|++++-+....+....+++++.    +       
T Consensus        27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~  106 (472)
T TIGR00769        27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA  106 (472)
T ss_pred             HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence            6667777663     356788888887777776 8999999999999999888887777777776654    1       


Q ss_pred             --------------------HHHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHH
Q 010692          125 --------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG  183 (503)
Q Consensus       125 --------------------~~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~  183 (503)
                                          +.|..-+.-+...+-...... .-..+.+|.++.+|-.|..+++..+.++|.++++.+..
T Consensus       107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~  186 (472)
T TIGR00769       107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK  186 (472)
T ss_pred             HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                123333344444444444444 67789999999999999999999999999999999988


Q ss_pred             hhcC--------cchhH----HHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692          184 VVGS--------HLNWR----YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI  251 (503)
Q Consensus       184 ~l~~--------~~gwr----~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (503)
                      ++.+        ...|.    ..+.+.++...+ .+.+.+.+.+....  +++..+ .                   +  
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~-~~~~~~~l~~~~~~--~~~~~~-~-------------------~--  241 (472)
T TIGR00769       187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLA-IILLYWWVNRNVLT--DPRSYN-P-------------------A--  241 (472)
T ss_pred             HHHHhhhccccccChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccC--Cccccc-h-------------------h--
Confidence            8762        12342    233333333332 33333333211100  000000 0                   0  


Q ss_pred             chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh--H---HH
Q 010692          252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD--M---MF  326 (503)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~  326 (503)
                         .  .++++       ++..+..++++.++++|.++.+.+...+++...+.+..-.-....+.+ .++.+  .   .+
T Consensus       242 ---~--~~~k~-------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~  308 (472)
T TIGR00769       242 ---L--KEKKV-------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDF  308 (472)
T ss_pred             ---h--ccccC-------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHH
Confidence               0  00000       111234577889999999888888777776665555443333334433 23211  1   22


Q ss_pred             HHhhhhhhhhchhhhhhhhhccccc
Q 010692          327 GGVTIVCGIVGTISGGFILDQMGAT  351 (503)
Q Consensus       327 ~~~~~~~~~~~~~~~g~l~d~~~~~  351 (503)
                      ....++..++..++.+++.+|+|-+
T Consensus       309 ~~~~gi~tl~~~l~~~~l~~~~Gw~  333 (472)
T TIGR00769       309 STWTGVVSVTMMLLSGNVIRKYGWL  333 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            3334445555566668888888876

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.12  E-value=1.9e-09  Score=102.80  Aligned_cols=147  Identities=10%  Similarity=0.033  Sum_probs=101.9

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT  363 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  363 (503)
                      +|.++...+.....+...+......+.+-+..+++++.+. .+.+++.+...+.++..|++.||+|.|     ++...+.
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~  107 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST  107 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence            3566666665555555555555555555555688887666 455777888888899999999999998     6666666


Q ss_pred             HHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHH
Q 010692          364 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV  438 (503)
Q Consensus       364 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~  438 (503)
                      ++..+..+.....     ++.+.+++.-++.+++ +..+++....+.+.+|+++||++.|+.....+. |..+++++.+.
T Consensus       108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~  185 (462)
T PRK15034        108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL  185 (462)
T ss_pred             HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence            6555555544443     4666666666777665 567778888888889999999999999655555 66555554444

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.11  E-value=1.1e-09  Score=103.71  Aligned_cols=151  Identities=17%  Similarity=0.149  Sum_probs=125.1

Q ss_pred             ccccC-CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHH----HHHHHHHh
Q 010692           65 RGDFK-LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIA----ICRMLVGV  138 (503)
Q Consensus        65 ~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~----~~r~l~G~  138 (503)
                      -+|.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...    +...++|+
T Consensus       234 l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~  313 (400)
T PF03825_consen  234 LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGL  313 (400)
T ss_pred             HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhH
Confidence            47777 677778888888889999999999999999999999999999999998888887 5544433    34567999


Q ss_pred             hhhhhhhchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcch------hHHHHHHHHHHHHHHHHHHHh
Q 010692          139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~g------wr~~f~~~~~~~~~~~~~~~~  211 (503)
                      ..+........++.+..|++.|+++.++++. ..++|..+|..++|++.+++|      |...+.+.+++.++..++.++
T Consensus       314 tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~  393 (400)
T PF03825_consen  314 TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI  393 (400)
T ss_pred             HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999876 478999999999999998765      556667777766666666655


Q ss_pred             cccc
Q 010692          212 IKPL  215 (503)
Q Consensus       212 ~~p~  215 (503)
                      +.+|
T Consensus       394 ~fk~  397 (400)
T PF03825_consen  394 LFKP  397 (400)
T ss_pred             hccC
Confidence            5533

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.11  E-value=2.4e-10  Score=103.87  Aligned_cols=143  Identities=14%  Similarity=0.099  Sum_probs=126.6

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      ..++|++..++.++.-.-.+..+++++++|+|.||+|.|+++..++++..+.++..-+...-..+.++-.+.|...|..+
T Consensus       280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q  359 (438)
T COG2270         280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ  359 (438)
T ss_pred             HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence            45899999999999999999999999999999999999999999999999998888888777778888899999999999


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHH
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAV  207 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~  207 (503)
                      ..+.++..+..|+++-++.+|+++...-.+..+||.+-+.+.+..| -|..+....++.++..+
T Consensus       360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~  423 (438)
T COG2270         360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL  423 (438)
T ss_pred             HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence            9999999999999999999999999999999999999998886544 66666666555433333

>TIGR01272 gluP glucose/galactose transporter

Probab=99.10  E-value=4.5e-10  Score=103.22  Aligned_cols=131  Identities=11%  Similarity=0.046  Sum_probs=108.8

Q ss_pred             ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhc
Q 010692           67 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL  146 (503)
Q Consensus        67 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~  146 (503)
                      .+|.++++.++..+.+..++.++.+..+++.||+|+|+++.++..+..++.++....++...+ .+-++.|++.+..+|.
T Consensus       172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~  250 (310)
T TIGR01272       172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT  250 (310)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999988888888877666655544333 3555889999999999


Q ss_pred             hhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHH
Q 010692          147 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI  200 (503)
Q Consensus       147 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~  200 (503)
                      ..+...+..|++ .+.+.++. ....+|.+++|++.|.+.+..|.+..|++..+
T Consensus       251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~  302 (310)
T TIGR01272       251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP  302 (310)
T ss_pred             HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence            999998888764 56666775 45668999999999999998899998885543

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.10  E-value=3.7e-10  Score=123.91  Aligned_cols=145  Identities=18%  Similarity=0.131  Sum_probs=125.0

Q ss_pred             ccccCCCcc-chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692           65 RGDFKLNNF-QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        65 ~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      .+++|.+.. +.+++.+...++..++++++|++.||+++|+++.++.++.+++.++..+..+.+.++++.++.|++.+..
T Consensus       260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  339 (1146)
T PRK08633        260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLF  339 (1146)
T ss_pred             HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence            567899988 9999999999999999999999999999999999999999888888888889999999999999999998


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-cchhHHHHHHHHHHHHHHHHHH
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~  209 (503)
                      .+...+++.+..|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..
T Consensus       340 ~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  406 (1146)
T PRK08633        340 IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT  406 (1146)
T ss_pred             hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence            88899999999999999999999999999999888888876653 2356667776666554444333

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.09  E-value=1.5e-09  Score=102.51  Aligned_cols=151  Identities=10%  Similarity=-0.020  Sum_probs=104.6

Q ss_pred             hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692          304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF  382 (503)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (503)
                      .+...+|.+.++ ++.++.+. .+.+...++..++.+..|++.||+|||     +.+..................+.+.+
T Consensus         9 ~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l   82 (368)
T TIGR00903         9 TFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNYEWL   82 (368)
T ss_pred             HHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            344556655544 67776655 555677888899999999999999987     55544443333332222222455566


Q ss_pred             HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692          383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG  462 (503)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  462 (503)
                      +..-++.+.+.+. ..+......+.+|+++|+++.++.+....+ |..+++.+.+++.+..| |+..|.+.+++.++..+
T Consensus        83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~  159 (368)
T TIGR00903        83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGII  159 (368)
T ss_pred             HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHH
Confidence            6666666666654 344555568889999999999999877777 99999999999988766 99888887666555444


Q ss_pred             H
Q 010692          463 I  463 (503)
Q Consensus       463 ~  463 (503)
                      +
T Consensus       160 ~  160 (368)
T TIGR00903       160 L  160 (368)
T ss_pred             H
Confidence            3

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.08  E-value=6.9e-10  Score=107.85  Aligned_cols=146  Identities=8%  Similarity=-0.014  Sum_probs=96.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh--h--hhHHHHHHHHHHHHHhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--S--SFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~l~G~g~  140 (503)
                      .+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+...  .  .++.+..+..-.+.+.+.
T Consensus       271 ~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (432)
T PRK10406        271 VNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIV  350 (432)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence            566888888999999988888899999999999999999988776665443332211  1  123332222222233333


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhH-HHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHh
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~  211 (503)
                      +...+....++.|++|++.|+.++|+.+...++ .....|.+.+.+.. .| |...++..++..++..+..++
T Consensus       351 ~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~  422 (432)
T PRK10406        351 SFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM  422 (432)
T ss_pred             HHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence            344455668899999999999999998866554 33447777776543 34 555666665555555554443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.08  E-value=1.3e-09  Score=104.08  Aligned_cols=151  Identities=16%  Similarity=0.157  Sum_probs=113.5

Q ss_pred             hhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 010692          305 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL  383 (503)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (503)
                      ....+|.+.++ ++.++... ...+...++..++.++.|++.||+|||     +.+..+.++..+........++.+...
T Consensus        10 ~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~   83 (377)
T PRK11102         10 YLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQLI   83 (377)
T ss_pred             HhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence            34555666655 67776554 455677788899999999999999998     677666666666665555556666666


Q ss_pred             HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      ...++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+.+.++..+.
T Consensus        84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~  161 (377)
T PRK11102         84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL  161 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence            6777777777777777888888988889999999999877777 88889999999988776 777777766655444333

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.08  E-value=3.3e-09  Score=101.94  Aligned_cols=151  Identities=11%  Similarity=0.034  Sum_probs=103.6

Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY  380 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (503)
                      .......+|.+. +.++.++... ...+...++..++.++.|+++||+|||     +.+..+.....+..+.....++.+
T Consensus        24 ~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~   97 (394)
T PRK11652         24 QTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHSLT   97 (394)
T ss_pred             HHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHH
Confidence            333344455555 4467776554 455677788899999999999999998     666655555555544444455566


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHH
Q 010692          381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA  460 (503)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~  460 (503)
                      ...+..++.+++.+...+.......+..++++++.+.+..+..... +..++|.+.+.+.+..| |+..+.+.++..++.
T Consensus        98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~~  175 (394)
T PRK11652         98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGAGV  175 (394)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHH
Confidence            5555556666655544455555666777778899999988766666 88889999999888766 888887766554433

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.08  E-value=4.5e-10  Score=102.06  Aligned_cols=144  Identities=17%  Similarity=0.052  Sum_probs=119.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-------HHHH----HHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWS----IAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~----l~~~r  133 (503)
                      +++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++.+....++++..+.....       +...    ++...
T Consensus       246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~  325 (417)
T COG2223         246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALF  325 (417)
T ss_pred             HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999999999988888888777653       3333    44455


Q ss_pred             HHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhc
Q 010692          134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      +..|+|.|    ....++..++|+ +-|.+.|+.....++|...-|..-+...+..| +...|++.....++..++.+..
T Consensus       326 ~~~G~GnG----svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~  400 (417)
T COG2223         326 VFAGLGNG----SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL  400 (417)
T ss_pred             HHhccCcc----hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            55566555    566778888776 58999999999999999888888887776666 9999999998888887776665


Q ss_pred             c
Q 010692          213 K  213 (503)
Q Consensus       213 ~  213 (503)
                      .
T Consensus       401 y  401 (417)
T COG2223         401 Y  401 (417)
T ss_pred             H
Confidence            5

>TIGR00898 2A0119 cation transport protein

Probab=99.05  E-value=1.9e-09  Score=107.26  Aligned_cols=138  Identities=12%  Similarity=-0.101  Sum_probs=110.8

Q ss_pred             hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHH--HHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692           77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDN  154 (503)
Q Consensus        77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~g~~~~~~~~~~~i~~~  154 (503)
                      +......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++.  +..++.-++.+++.+...+....+..|.
T Consensus       359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  438 (505)
T TIGR00898       359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL  438 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            33445567778889999999999999999999999999888887776543  4555566677777777788888999999


Q ss_pred             CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      +|++.|+.++|+.+....+|.+++|.+.+ +. ..++..++++.++..++..++.+ ++||+.
T Consensus       439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~lpet~  498 (505)
T TIGR00898       439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTL-FLPETK  498 (505)
T ss_pred             ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence            99999999999999999999999999988 43 45677888888877777666554 446643

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.05  E-value=1.3e-09  Score=97.13  Aligned_cols=143  Identities=15%  Similarity=0.142  Sum_probs=101.1

Q ss_pred             hHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhH
Q 010692          323 DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY  402 (503)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (503)
                      +..+.+.+.++..+.++..|.++||+|||     ..+..+....++..++.....+. ..++..=+.+.......+...+
T Consensus        70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~kgnl~v~rA  143 (451)
T KOG2615|consen   70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIFKGNLSVIRA  143 (451)
T ss_pred             hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccCchHHHHH
Confidence            34667788899999999999999999999     77777777666666666655665 3333322333344466778899


Q ss_pred             HhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692          403 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS  472 (503)
Q Consensus       403 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (503)
                      ++.|.+++++|+.+++.+++..++ |.++||.++|++..   ..|.|..++-.+.++.....-++++..++++
T Consensus       144 iisdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE  215 (451)
T KOG2615|consen  144 IISDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE  215 (451)
T ss_pred             HHHhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999999999988888 99999999999987   5565533333333333333323444444553

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.04  E-value=7.5e-10  Score=121.06  Aligned_cols=146  Identities=12%  Similarity=0.085  Sum_probs=121.4

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------------------h
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------------F  124 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------------~  124 (503)
                      .+.+|.+..+.|++.+.+.++.++++++.|+++|+.++++.+..+.++.+++.+..++.                    +
T Consensus       253 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  332 (1140)
T PRK06814        253 KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR  332 (1140)
T ss_pred             HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence            45689999999999999999999999999999999888777777766666666544443                    6


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHH
Q 010692          125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILML  203 (503)
Q Consensus       125 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~  203 (503)
                      +.+.++++.++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++++.+. ...++...+++.+++.+
T Consensus       333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~  412 (1140)
T PRK06814        333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANL  412 (1140)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence            77888889999999999999999999999999999999999999999999999999998886 34567777776666555


Q ss_pred             HHHHHHH
Q 010692          204 PFAVLAF  210 (503)
Q Consensus       204 ~~~~~~~  210 (503)
                      +..+..+
T Consensus       413 ~~~~~~~  419 (1140)
T PRK06814        413 IVAILIL  419 (1140)
T ss_pred             HHHHHHH
Confidence            5444433

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=99.04  E-value=5.6e-09  Score=91.77  Aligned_cols=356  Identities=10%  Similarity=-0.036  Sum_probs=221.6

Q ss_pred             chhHHHHHHhhhcccCCCCCcccccccc-cccCCCccchh-hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692           38 PPLAEAEMATRSLSEDSPPTPSWFTPKR-GDFKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF  115 (503)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~  115 (503)
                      ++|...++.-     ..+.-|.+.|-+. .+-|++..|+. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+....
T Consensus        10 llC~yG~~~e-----~RPseP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~   84 (433)
T KOG3810|consen   10 LLCLYGFVRE-----FRPSEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVP   84 (433)
T ss_pred             hhhhhhHHHH-----hCCCCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhH
Confidence            3444444442     3344444433333 56677766653 344555666777777888889999999999888888888


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc--hhHH
Q 010692          116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRY  193 (503)
Q Consensus       116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~  193 (503)
                      ...+.-+.++.+.+=+.-+..|...+ ...+.++++-+..+++++.++.+....+.-.|-.+|..++-.+....  ++..
T Consensus        85 ~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~  163 (433)
T KOG3810|consen   85 VWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTT  163 (433)
T ss_pred             HHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhh
Confidence            88888999999999999999999887 55678899999999999999999999999999999999998887532  3344


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692          194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS  273 (503)
Q Consensus       194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (503)
                      .-.+.-....+..++ .+++|..++..--...+++.       ...+.       ++...       +.+..........
T Consensus       164 LN~ISL~~~~ia~~~-A~fLP~v~rSl~f~~~~~~~-------~v~~~-------e~~~~-------~~~~~~~l~~~~~  221 (433)
T KOG3810|consen  164 LNYISLAEVTIAVLL-ALFLPRVKRSLYFHRLEDKI-------SVGDL-------EEMNP-------QASYMSYLRGAFV  221 (433)
T ss_pred             hchhhHHHHHHHHHH-HhhCCCCchhhhhhcccccc-------eeccc-------hhcCc-------cchhhHHHHHHHH
Confidence            444433332333333 33334321110000000000       00000       00000       0000000112334


Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH---HHHHhhhhhhhhchhhhhhhhhcccc
Q 010692          274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM---MFGGVTIVCGIVGTISGGFILDQMGA  350 (503)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~~~  350 (503)
                      ..++++++..+||.+....+.+.+...+++...++....-.+.. .++...   ..=++..+.++++.+..|.+--...|
T Consensus       222 ~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r  300 (433)
T KOG3810|consen  222 LLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR  300 (433)
T ss_pred             HHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence            45567888889999988888888877777777777665554432 222111   12234445566777777877655544


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692          351 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH  425 (503)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  425 (503)
                      +..   .++.++....++..+.+....+.|...+...+.........+.....++.....+.-|...|+.....-
T Consensus       301 ~g~---~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl  372 (433)
T KOG3810|consen  301 WGD---LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL  372 (433)
T ss_pred             hhH---HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH
Confidence            321   344444555555555555566777777777777777777777777777888888888888888754433

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=99.03  E-value=3.3e-08  Score=98.90  Aligned_cols=149  Identities=17%  Similarity=0.146  Sum_probs=123.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh--------HHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--------DFWSIAICRML  135 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l  135 (503)
                      .+.+|.+.++...+...+....-+..+++|+++|++ |+++.+.++.++..+|.++.+++.        .....+++-.+
T Consensus        15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL   94 (654)
T TIGR00926        15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL   94 (654)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence            456788888888889999999999999999999976 999999999999999998887642        12346677888


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCC---chhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHHHH
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPF  205 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~  205 (503)
                      .++|.|++-|...+...|-+++++   |-..+.++..+.++|..+++++.+++.+.       .+|...|.+.++..++.
T Consensus        95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia  174 (654)
T TIGR00926        95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA  174 (654)
T ss_pred             HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence            889999999999999999997643   66788899999999999999999888633       36999999999887777


Q ss_pred             HHHHHhcc
Q 010692          206 AVLAFVIK  213 (503)
Q Consensus       206 ~~~~~~~~  213 (503)
                      .++.....
T Consensus       175 ~lvf~~g~  182 (654)
T TIGR00926       175 LIVFMAGS  182 (654)
T ss_pred             HHHHHHhc
Confidence            66655443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.03  E-value=1.9e-09  Score=105.98  Aligned_cols=147  Identities=14%  Similarity=0.021  Sum_probs=102.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH--------HHHHHHH--HHHHHHhhh-hhHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI--------GVGLSVW--TFATAGCGS-SFDFWSIAICR  133 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l--------~~~~~~~--~~~~~~~~~-~~~~~~l~~~r  133 (503)
                      .+++|.+..+.+++.++..++..++.++.|+++||+++|+..        ..+....  ++..+.... ..+.+..+++-
T Consensus       289 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (465)
T TIGR00894       289 SWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIIL  368 (465)
T ss_pred             HHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence            567899999999999999999999999999999998755321        1111111  111111111 23344444444


Q ss_pred             HHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc---chhHHHHHHHHHHHHHHHHHHH
Q 010692          134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---LNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       134 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      .+.+.+.+...+.......|..|+ .+|.++++.+....+|..++|.+.+.+.+.   .+|+..|++.++..++..++..
T Consensus       369 ~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~  447 (465)
T TIGR00894       369 TLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL  447 (465)
T ss_pred             HHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence            555555554555555556677765 799999999999999999999999988764   3499999999887777666554


Q ss_pred             hc
Q 010692          211 VI  212 (503)
Q Consensus       211 ~~  212 (503)
                      +.
T Consensus       448 ~~  449 (465)
T TIGR00894       448 IF  449 (465)
T ss_pred             ee
Confidence            44

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.02  E-value=7.5e-09  Score=99.74  Aligned_cols=142  Identities=12%  Similarity=0.097  Sum_probs=103.3

Q ss_pred             hhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 010692          314 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL  392 (503)
Q Consensus       314 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (503)
                      .+.++.+.... ...+++.++..++.++.|+++||+|||     +.+..+.++..+..+.....++.+.+++.-++.+.+
T Consensus        43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~  117 (413)
T PRK15403         43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS  117 (413)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            34566665444 445677788899999999999999999     666666666655555555566666666666666666


Q ss_pred             HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692          393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG  462 (503)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  462 (503)
                      .+...+.......+.+++++++++.++.+....+ |..++|.+++.+.+..| |+..|++.++..++..+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~~  185 (413)
T PRK15403        118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAFV  185 (413)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHH
Confidence            5544444556667778888899999999888777 88889989988887765 88888887766555443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.02  E-value=1.1e-08  Score=95.91  Aligned_cols=130  Identities=13%  Similarity=0.038  Sum_probs=106.2

Q ss_pred             ccchhhhhcccchhh-H-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 010692          309 GPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF  386 (503)
Q Consensus       309 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (503)
                      ...++.+.+|+++.+ . .+......+..+..+.+|++.||+|.|     +++....+...+..++.....+...+.+.-
T Consensus        48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R  122 (511)
T TIGR00806        48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME  122 (511)
T ss_pred             HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333666678888766 3 556777889999999999999999999     777777777777777777777778888888


Q ss_pred             HHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692          387 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR  447 (503)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~  447 (503)
                      ++.|.+.+..+ ....++.+-+|+++|+++.|+.+....+ |.++++++.+++. ..| |+
T Consensus       123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll~-s~g-Wr  179 (511)
T TIGR00806       123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLLV-TLG-WI  179 (511)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-hcC-ch
Confidence            88888888888 8889999999999999999999988888 9999999998844 444 44

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.01  E-value=2.5e-09  Score=91.29  Aligned_cols=172  Identities=15%  Similarity=0.073  Sum_probs=121.7

Q ss_pred             cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692           33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV  112 (503)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~  112 (503)
                      ++.+..+|.+....-+   -.....+.++   ++.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+
T Consensus       266 fw~~~iicv~yyva~f---PFi~lg~~fF---~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~  339 (459)
T KOG4686|consen  266 FWVLVIICVLYYVAWF---PFITLGPMFF---QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI  339 (459)
T ss_pred             HHHHHHHHHHHHHHHH---HHhhhhHHHH---HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence            3444455555554433   1222223333   799999999999999999999999999999999999999877666554


Q ss_pred             HHHH-HHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-
Q 010692          113 WTFA-TAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-  190 (503)
Q Consensus       113 ~~~~-~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-  190 (503)
                      ..+. -...  .-+++.=+++..+.|+..+.........++...|+++.|.+.+..+...++|..+.|++++.+.+.-| 
T Consensus       340 ~tl~~H~~l--~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~  417 (459)
T KOG4686|consen  340 LTLLGHSGL--FFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS  417 (459)
T ss_pred             HHHHHhhhH--HhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence            4332 2222  22344445677888888887766677888888999999999999999999999999999999987544 


Q ss_pred             --hHHHHH-HHHHHHHHHHHHHHhcc
Q 010692          191 --WRYAFW-GEAILMLPFAVLAFVIK  213 (503)
Q Consensus       191 --wr~~f~-~~~~~~~~~~~~~~~~~  213 (503)
                        |--.|. +.+.+++... .+++..
T Consensus       418 y~~le~ffl~~~~~aL~sv-gil~~~  442 (459)
T KOG4686|consen  418 YDNLEAFFLIIGLMALTSV-GILFYL  442 (459)
T ss_pred             hhhHHHHHHHHHHHHHHHH-HHHhhe
Confidence              544444 4444444433 334443

>PRK09848 glucuronide transporter; Provisional

Probab=99.01  E-value=3e-09  Score=104.00  Aligned_cols=124  Identities=10%  Similarity=0.041  Sum_probs=101.1

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~  142 (503)
                      ++.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+  +++.+++..++.|+|.+.
T Consensus       256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~  335 (448)
T PRK09848        256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV  335 (448)
T ss_pred             eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence            455676655444545555677888999999999999999999999999888887776643  677777888899999999


Q ss_pred             hhhchhhhhhccCCCC-------CchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692          143 FISLAAPFIDDNAPVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSH  188 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~  188 (503)
                      ..+...++..|..+.+       ++|...++.+....+|..+|+.+.+.+.+.
T Consensus       336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~  388 (448)
T PRK09848        336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL  388 (448)
T ss_pred             HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999888754       358999999999999999999998876543

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.01  E-value=2.8e-10  Score=104.33  Aligned_cols=154  Identities=11%  Similarity=0.116  Sum_probs=124.5

Q ss_pred             hhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 010692          314 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL  392 (503)
Q Consensus       314 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (503)
                      ++.++.++... .+.....+...++.+++|++.||+.|+     .++..+..+-.+..+........|.+.++=.+.|.+
T Consensus        60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG  134 (493)
T KOG1330|consen   60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG  134 (493)
T ss_pred             HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            34456665443 666788889999999999999999998     677666666666666666667888888888888999


Q ss_pred             HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692          393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS  472 (503)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (503)
                      .....+..+.++.+.+|.++|++++++.+..... |..+|-..+..+.+..+.|+++|...+++.++..++.++...-|+
T Consensus       135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~  213 (493)
T KOG1330|consen  135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE  213 (493)
T ss_pred             hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence            9899999999999999999999999999999998 888888888888888887999999988887777776665443343


Q ss_pred             c
Q 010692          473 I  473 (503)
Q Consensus       473 ~  473 (503)
                      |
T Consensus       214 r  214 (493)
T KOG1330|consen  214 R  214 (493)
T ss_pred             c
Confidence            3

>TIGR00896 CynX cyanate transporter

Probab=99.00  E-value=1.7e-09  Score=102.32  Aligned_cols=128  Identities=16%  Similarity=0.083  Sum_probs=103.7

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      |.+.++.|.+..+.+.+.+.+.++..+++++.|++.||+ +||+.+..+..+.+++.++..+.++..... .-++.|++.
T Consensus       221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~  299 (355)
T TIGR00896       221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ  299 (355)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence            444567899999999999999999999999999999999 567777788888888877777665433332 456789999


Q ss_pred             hhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692          141 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN  190 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g  190 (503)
                      +...+...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus       300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9888887777766554 5667899999999899999999999999987665

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.99  E-value=1e-08  Score=97.47  Aligned_cols=156  Identities=11%  Similarity=-0.075  Sum_probs=126.8

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh---HHH------HHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAIC  132 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~~  132 (503)
                      ..+-++-|++..+..+..........+..+.+..+.||+|||+.++.+..++.+..++.....   +..      ..+++
T Consensus       294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~  373 (485)
T KOG0569|consen  294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA  373 (485)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            555678899999999999999999999999999999999999999999999999888876542   211      12344


Q ss_pred             HHHHHhhhhh-hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692          133 RMLVGVGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       133 r~l~G~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~  211 (503)
                      .++..++.+. .-|...-+.+|.+|++.|+.++++......+...+-......+.+.+|= +.|++..+++++..+..++
T Consensus       374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~  452 (485)
T KOG0569|consen  374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR  452 (485)
T ss_pred             HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence            4444444332 4577888999999999999999999999888888777777777666665 8899999999999999999


Q ss_pred             ccccccC
Q 010692          212 IKPLQLK  218 (503)
Q Consensus       212 ~~p~~~~  218 (503)
                      .+||+..
T Consensus       453 ~lPETkg  459 (485)
T KOG0569|consen  453 YLPETKG  459 (485)
T ss_pred             hCcccCC
Confidence            9999653

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.99  E-value=1.1e-08  Score=98.38  Aligned_cols=146  Identities=9%  Similarity=0.032  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692          288 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG  366 (503)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~  366 (503)
                      ++..+..++.............|.+ ++.++.++.+. .+.+...++..++.+..|++.||+|+|     +.+..+.++.
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~   78 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLY   78 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence            3344444555555555555666655 56678886555 555777889999999999999999999     6776666665


Q ss_pred             HHHHHHHHH---hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692          367 AISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       367 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                      ++..++...   .++.+.++...++.+.+.+...+..+.++.+..|++++++..++.+...++ |..++|.+.+.+.
T Consensus        79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~  154 (410)
T TIGR00885        79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI  154 (410)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            555444322   235566667777788888888888888888888888999999999888887 9888998888774

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=98.98  E-value=1.3e-09  Score=106.01  Aligned_cols=154  Identities=17%  Similarity=0.194  Sum_probs=139.5

Q ss_pred             cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC--CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      ++++..++.+.++.+.+.+.++..+...++.++.|+++|+..  ++.+..+++++.+++...++++++++.++..-.+.|
T Consensus       320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG  399 (509)
T KOG2504|consen  320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG  399 (509)
T ss_pred             HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence            346667899999999999999999999999999999999998  556788888899999999999999999999999999


Q ss_pred             hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhcc
Q 010692          138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ++.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..| |...|+.+++..++....+++..
T Consensus       400 ~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  400 FCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             HHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence            99998888888899999999999999999999999999999999999988777 99999999988777776655543

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=98.96  E-value=6.2e-09  Score=83.79  Aligned_cols=128  Identities=16%  Similarity=0.201  Sum_probs=95.0

Q ss_pred             hhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhccc
Q 010692          329 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV  408 (503)
Q Consensus       329 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (503)
                      ...++..++.++.+++.||++||     +.+...........+.....++.+......++.+.+.+...+.......+..
T Consensus         6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   80 (141)
T TIGR00880         6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY   80 (141)
T ss_pred             eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence            34566778889999999999998     5665555555554444444456666666677777777777777888889999


Q ss_pred             CCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          409 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       409 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      |+++|+++.++.+..... |..++|.+.+.+.+..+ ++..+.+.+...++..+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  133 (141)
T TIGR00880        81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFIL  133 (141)
T ss_pred             ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHH
Confidence            999999999999888877 88999999999988765 666776666554444433

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.92  E-value=1.9e-08  Score=97.66  Aligned_cols=121  Identities=17%  Similarity=0.190  Sum_probs=107.1

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~~  143 (503)
                      ..++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+  |.+.+++.-++.|++.+..
T Consensus       254 ~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~  332 (428)
T PF13347_consen  254 YVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAF  332 (428)
T ss_pred             HHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccc
Confidence            334444 6778888999999999999999999999999999999999999999998886  9999999999999999999


Q ss_pred             hhchhhhhhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcC
Q 010692          144 ISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGS  187 (503)
Q Consensus       144 ~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~  187 (503)
                      .+...++++|..+.       ++.|..++..+....+|..+++.+.+.+.+
T Consensus       333 ~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~  383 (428)
T PF13347_consen  333 FVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA  383 (428)
T ss_pred             ccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence            99999999998863       345888999999999999999998887753

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=98.91  E-value=7.3e-09  Score=96.74  Aligned_cols=149  Identities=17%  Similarity=0.110  Sum_probs=135.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      .+|.+..+...|........+-++.-++.+++..|+|+-+++.+++.+..+=.+.....+|.|..+-..+++|+..+.++
T Consensus       398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW  477 (618)
T KOG3762|consen  398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW  477 (618)
T ss_pred             HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence            47788788888988888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .+..+|+++..|++-|..+.++.+. ..++|-.+|.++||.+.+.+|-|..|.+.++.+++..++...+-
T Consensus       478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq  547 (618)
T KOG3762|consen  478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ  547 (618)
T ss_pred             HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999998765 57889999999999999999999999999988877766655443

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.89  E-value=2.5e-08  Score=97.97  Aligned_cols=118  Identities=19%  Similarity=0.099  Sum_probs=95.6

Q ss_pred             CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHhhhhhhhh
Q 010692           71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      +....+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+     .++.+.+++.-++.|++.+...+
T Consensus       264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~  343 (473)
T PRK10429        264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV  343 (473)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence            4556777778778899999999999999999999999888877766655432     35677777788889999999999


Q ss_pred             chhhhhhccCC-------CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692          146 LAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH  188 (503)
Q Consensus       146 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~  188 (503)
                      ...++++|..+       .++.|..++......-+|..+++.+.+++.+.
T Consensus       344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~  393 (473)
T PRK10429        344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL  393 (473)
T ss_pred             HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999865       33346688999999999999999998887643

>PRK10133 L-fucose transporter; Provisional

Probab=98.88  E-value=1.9e-08  Score=97.54  Aligned_cols=139  Identities=10%  Similarity=-0.136  Sum_probs=113.2

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      ++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.+ -+..-.+.|++.+..+
T Consensus       287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~  365 (438)
T PRK10133        287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY  365 (438)
T ss_pred             hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999998888777776666655543 2456678899999999


Q ss_pred             hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHH
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFA  206 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~  206 (503)
                      |...+...+..+++ .+.+.++..+ ..+|..++|.+.+.+.+..| -|..|++..+..+...
T Consensus       366 P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~  426 (438)
T PRK10133        366 PTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF  426 (438)
T ss_pred             HHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence            99999999988764 6777777765 44688888899999988887 7888887665444333

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.88  E-value=5.5e-09  Score=93.92  Aligned_cols=149  Identities=12%  Similarity=0.109  Sum_probs=123.7

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC--CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~  142 (503)
                      .|.+..+..++|...--..+.+.++..+.|.++||++  |-.....++++.+++.....+++++.++++-++..|++.+.
T Consensus       298 ~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~  377 (464)
T KOG3764|consen  298 LETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGL  377 (464)
T ss_pred             HHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHH
Confidence            6777766669999888899999999999999999999  54455667777777777788999999999999888888877


Q ss_pred             hhhchhhhhhccCCCC------CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          143 FISLAAPFIDDNAPVP------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ..........+..+.+      --|...++...++++|..+||.+++.+.+..|++|...+.++..++...++.++.
T Consensus       378 ~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~  454 (464)
T KOG3764|consen  378 ADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR  454 (464)
T ss_pred             HHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6665555555554332      3468899999999999999999999999999999999999999998888776654

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.87  E-value=3.6e-08  Score=96.33  Aligned_cols=176  Identities=14%  Similarity=0.114  Sum_probs=119.0

Q ss_pred             hhhhHHHHHHHHHHHHH----HhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692          284 QEKVYVVNVLGYIAYNF----VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL  359 (503)
Q Consensus       284 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  359 (503)
                      ++++++..+....+...    ........++.+.++ .|.++...++.....++..++.++.|+++|.+|||     ..+
T Consensus        38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~  111 (599)
T PF06609_consen   38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFF  111 (599)
T ss_pred             eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHH
Confidence            45555555443333222    222222334545555 44455555566667788888899999999999999     888


Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692          360 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l  439 (503)
                      +.+.++..+..+.....++...++....+.+.+.+... .....+.|.+|.+.|..+.++.... .+.....+|.+...+
T Consensus       112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~-~i~~~~~~~~ia~~~  189 (599)
T PF06609_consen  112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIP-FIITTWISPLIAQLF  189 (599)
T ss_pred             HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHH-HHhhhcccHHHHHHh
Confidence            88888888888888888888888888888887765443 3455578888889998888776543 333555677666555


Q ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692          440 QDHVNNWRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       440 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                      ... ++|++.|++.++...++.++.++..
T Consensus       190 ~~~-~~WRw~~~~~~i~~~i~~vl~~~fY  217 (599)
T PF06609_consen  190 AAH-SGWRWIFYIFIIWSGIALVLIFFFY  217 (599)
T ss_pred             ccC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            443 4699999988877666665554433

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.86  E-value=2.6e-08  Score=92.48  Aligned_cols=144  Identities=22%  Similarity=0.344  Sum_probs=118.7

Q ss_pred             cccccccCCCc--cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHH
Q 010692           62 TPKRGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVG  137 (503)
Q Consensus        62 ~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G  137 (503)
                      +.+..+++.+.  .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.+++++..+  .+.+++.|+++|
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  105 (338)
T COG0477          26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG  105 (338)
T ss_pred             HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence            33455565555  47899999999999999999999999999999888888776666777777766  899999999999


Q ss_pred             hhhhhhhhchhhhhhccCCC-CCchhHHHHHHh-HHhHHHHHHHHHHHhhcCc--chhHHHHHHHHHHHHHH
Q 010692          138 VGEASFISLAAPFIDDNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPF  205 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~  205 (503)
                      ++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+...  .+||..|.+........
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (338)
T COG0477         106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL  177 (338)
T ss_pred             hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence            99999999999999999998 678999998888 5888889998887776643  57999777766555433

>TIGR00901 2A0125 AmpG-related permease

Probab=98.85  E-value=5.4e-09  Score=98.96  Aligned_cols=111  Identities=10%  Similarity=-0.040  Sum_probs=94.2

Q ss_pred             cccccccCCCccchhhHHHHHH-HHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----------hHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----------FDFWSI  129 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~~l  129 (503)
                      +...+++|.+.++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+.           ++++.+
T Consensus       233 ~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (356)
T TIGR00901       233 TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLML  312 (356)
T ss_pred             HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence            3334568999999998887665 6788999999999999999999998888888777765543           456778


Q ss_pred             HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHh
Q 010692          130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP  172 (503)
Q Consensus       130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~  172 (503)
                      ..+.++.+++.+...+...+++.|.+|+++||+.+++.++..+
T Consensus       313 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       313 FLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            8889999999999999999999999999999999999887654

>TIGR00788 fbt folate/biopterin transporter

Probab=98.84  E-value=2.3e-08  Score=97.58  Aligned_cols=126  Identities=10%  Similarity=-0.018  Sum_probs=111.5

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----------hHHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----------FDFWSIAICRM  134 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~  134 (503)
                      .+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+.....          ++.+.++..-+
T Consensus       280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~  359 (468)
T TIGR00788       280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI  359 (468)
T ss_pred             cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence            35789999999999999999999999999999999999999999999999888664311          34445566788


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN  190 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g  190 (503)
                      +.+++.+........++.+..|++++|...++.++..++|..+++.+++.+.+.+|
T Consensus       360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999987665

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.79  E-value=6e-08  Score=86.56  Aligned_cols=154  Identities=18%  Similarity=0.141  Sum_probs=126.7

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG  137 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G  137 (503)
                      .++|++-.|-|+|..+.|++.+...+.....++....+.+|. ++|+..+....++.++...+.+.+.-..++- -++.|
T Consensus       229 ~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG  307 (395)
T COG2807         229 GWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLG  307 (395)
T ss_pred             HHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHh
Confidence            344777899999999999999999999999999999999966 6888888888888888888887765444333 49999


Q ss_pred             hhhhhhhhchhhhhhccCCCC-CchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          138 VGEASFISLAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       138 ~g~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      +|.|..++.+...+.+..+.. +-++..++.+....+=..+||.+.|++-|.. +|+..++......+...+..+..-
T Consensus       308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~  385 (395)
T COG2807         308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG  385 (395)
T ss_pred             CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999987654 4566777888877777888999999998765 599999888877777666666554

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.79  E-value=1.5e-07  Score=90.65  Aligned_cols=165  Identities=13%  Similarity=0.036  Sum_probs=102.1

Q ss_pred             HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc----ccccchhhHHHHHHHHHHHHHH
Q 010692          295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSAATFLGAIS  369 (503)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~~~~~~~~  369 (503)
                      .+...+.+.....+++.|+++ .|.++... .+..+..+.+++..++.|+++||    +|||+    ..+..+....+..
T Consensus        13 ~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~g~~~~~~~   87 (477)
T TIGR01301        13 AAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAAGAALVAFA   87 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHHHHHHHHHH
Confidence            344445555556677777755 66775444 44456678888999999999995    77773    3333333333333


Q ss_pred             HHHHHHhhhH-----------------HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc--hhHHHHHHHHHhhcccc
Q 010692          370 CLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIHIFGDV  430 (503)
Q Consensus       370 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~g~~  430 (503)
                      ..++....+.                 +..+..+.+..+......++..+++.|..|+++|  +.+.++.+...++ |++
T Consensus        88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l-G~i  166 (477)
T TIGR01301        88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI-GNV  166 (477)
T ss_pred             HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH-HHH
Confidence            3333322211                 2223333444556667788899999999998754  6789988877777 999


Q ss_pred             cchhhHHHH--Hhhh------------hhHHHHHHHHHHHHHHHHHHHH
Q 010692          431 PSSPLVGVL--QDHV------------NNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       431 ~~~~~~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +++.+++..  .+..            .+++..|++.++++++...+..
T Consensus       167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~  215 (477)
T TIGR01301       167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIAL  215 (477)
T ss_pred             HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHe
Confidence            888777654  2211            1456677766665555444433

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PTZ00207 hypothetical protein; Provisional

Probab=98.78  E-value=1.6e-07  Score=92.42  Aligned_cols=152  Identities=15%  Similarity=0.088  Sum_probs=94.0

Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----  376 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  376 (503)
                      .+.+..+.|. +++.++.+..+. .+..+ +.......+..|++.||+|+|     +++..+.++..+..++....    
T Consensus        43 ~y~fsv~s~~-L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~  115 (591)
T PTZ00207         43 MYAFNLISGA-MQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV  115 (591)
T ss_pred             HHHHHHHHHH-HHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence            4455555564 456688886554 22222 222234556789999999999     77776666666655554443    


Q ss_pred             --hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccc-cchhhHHHHHhhhhhHHHHHHHH
Q 010692          377 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV-PSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       377 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~-~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                        .+.+.+.+..++.+.+.+...+.....+.+.+ |++||.+.|+.....++ |.+ +++...+++.+   ++...+++.
T Consensus       116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l  190 (591)
T PTZ00207        116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL  190 (591)
T ss_pred             ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence              35555666666666666655566666666666 57899999999988888 665 45545554443   244566666


Q ss_pred             HHHHHHHHHHHH
Q 010692          454 TSIFFLAAGIWF  465 (503)
Q Consensus       454 ~~~~~~~~~~~~  465 (503)
                      +++.++..++..
T Consensus       191 ~vl~~vv~ll~~  202 (591)
T PTZ00207        191 MSFALVVGILAI  202 (591)
T ss_pred             HHHHHHHHHHHH
Confidence            555554444443

>PRK09669 putative symporter YagG; Provisional

Probab=98.75  E-value=6.8e-08  Score=94.30  Aligned_cols=119  Identities=13%  Similarity=0.087  Sum_probs=93.6

Q ss_pred             cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHhhhhhhhhchhhh
Q 010692           73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVGEASFISLAAPF  150 (503)
Q Consensus        73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~  150 (503)
                      ...+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+  .++.+.+++..++.|++.+...+...++
T Consensus       264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am  343 (444)
T PRK09669        264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM  343 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455666777888899999999999999999998888766654443322  3577788888899999999999999999


Q ss_pred             hhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692          151 IDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW  191 (503)
Q Consensus       151 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw  191 (503)
                      ++|..+.       ++.|...+..+....+|..+|+.+++.+.+..|+
T Consensus       344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9998752       2345678889999999999999999887654443

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.73  E-value=5.1e-08  Score=91.07  Aligned_cols=177  Identities=12%  Similarity=0.052  Sum_probs=126.8

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcc----cchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL  358 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~  358 (503)
                      .|.++.+...-+.--++++++...+..|+....+    .++..+ .+...+....-+..+++||++|| +|+|     +.
T Consensus        20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~t   94 (498)
T COG3104          20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RT   94 (498)
T ss_pred             CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HH
Confidence            3455666666677778888888877778877776    775444 33333333334467889999999 4777     66


Q ss_pred             HHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC--CCchhHHHHHHHHHhhcccccchh
Q 010692          359 LSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSP  434 (503)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~  434 (503)
                      ++.+.++.++..+.+...  .....+.+.+.+...+.+..=+....+..+.+|+  ..|..+.++.+...++ |++++|.
T Consensus        95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl~~p~  173 (498)
T COG3104          95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSLIAPI  173 (498)
T ss_pred             HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHHHHHH
Confidence            666666555555555444  3455556666666677788888888899999987  3577788888888888 9999999


Q ss_pred             hHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692          435 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI  468 (503)
Q Consensus       435 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  468 (503)
                      +.+++.++.| |...|...++-...+.+.+...+
T Consensus       174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~  206 (498)
T COG3104         174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR  206 (498)
T ss_pred             HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999988 88888888877777766665443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.72  E-value=6e-08  Score=97.93  Aligned_cols=125  Identities=8%  Similarity=-0.054  Sum_probs=89.1

Q ss_pred             hhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-------------
Q 010692          312 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-------------  377 (503)
Q Consensus       312 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  377 (503)
                      -+++.++.+.... .+.+...++..++.++.+++.||.+||     +++..+.++..+..++....+             
T Consensus        58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~  132 (633)
T TIGR00805        58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS  132 (633)
T ss_pred             hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence            3445577775444 555677888899999999999999998     555555444444443332221             


Q ss_pred             --------------------------------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH
Q 010692          378 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI  419 (503)
Q Consensus       378 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  419 (503)
                                                            ....+++.-++.|++.+..++....++.|.+|+++|+...|+
T Consensus       133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i  212 (633)
T TIGR00805       133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI  212 (633)
T ss_pred             ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence                                                  112334555666666667777788899999999999999999


Q ss_pred             HHHHHhhcccccchhhHHHHHhh
Q 010692          420 STVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       420 ~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                      .+....+ |..+|+.+++++.+.
T Consensus       213 ~~~~~~i-G~~lG~llgg~l~~~  234 (633)
T TIGR00805       213 LESIAVF-GPAFGYLLGSFCLQI  234 (633)
T ss_pred             HHHHHHh-hhHHHHHHHHHHHhc
Confidence            9877776 989999999988754

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=98.72  E-value=4.2e-08  Score=87.28  Aligned_cols=127  Identities=7%  Similarity=0.037  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH--HH--HHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692           81 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FW--SIAICRMLVGVGEASFISLAAPFIDDNAP  156 (503)
Q Consensus        81 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~  156 (503)
                      +..+.-.-|.++.+++.||+|||+++..+.+++++..++...+.+  ..  .++.+|++..    +.+.+.+.|..|.+|
T Consensus       389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVyP  464 (528)
T KOG0253|consen  389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYP  464 (528)
T ss_pred             HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCcccc
Confidence            445666789999999999999999999999999999988776643  32  2344665543    455678899999999


Q ss_pred             CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          157 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .+-|+...|..+...-+|.++.|+++ ...+ .+-..+..+.+.++++..+...+++
T Consensus       465 TavRatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffP  519 (528)
T KOG0253|consen  465 TAVRATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFP  519 (528)
T ss_pred             hhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeee
Confidence            99999999999999999999999998 3222 2334455566666666666665554

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=98.70  E-value=5.4e-06  Score=74.41  Aligned_cols=352  Identities=10%  Similarity=-0.026  Sum_probs=180.5

Q ss_pred             CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh-----hcCCchh-----
Q 010692           36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-----SHNPFRL-----  105 (503)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~-----  105 (503)
                      +..+.+.....+..++... ..|.+    -+.=|.|-++.+....++.  -...-++|.++.|     |+||||.     
T Consensus        33 illLl~LYllQGiP~GL~~-~iP~l----L~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~  105 (510)
T KOG3574|consen   33 ILLLLFLYLLQGIPLGLIG-AIPLL----LQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPC  105 (510)
T ss_pred             HHHHHHHHHHcCCchhHhh-hhHHH----hcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeeh
Confidence            3344444555555433444 44444    4666777777665433221  1134567888888     9999984     


Q ss_pred             -HHHHHHHHHHHHHHh------hhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHH
Q 010692          106 -IGVGLSVWTFATAGC------GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG  178 (503)
Q Consensus       106 -l~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g  178 (503)
                       .++|.++..++...-      +-.++...+...-++.-+..+.--.+.-.+.-....+++.|.+......+.+.|..++
T Consensus       106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~  185 (510)
T KOG3574|consen  106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG  185 (510)
T ss_pred             HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence             233333333332211      1123333343344455555555556666666677788888888888888777777776


Q ss_pred             HHHHHhhcC-----c--chh---------HHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCC
Q 010692          179 YVYGGVVGS-----H--LNW---------RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN  242 (503)
Q Consensus       179 ~~l~~~l~~-----~--~gw---------r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (503)
                      ..+--.+..     .  .+|         ..-.++.+.+.++...+..+..+|.      +++..    +|.        
T Consensus       186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~------~~~~~----~e~--------  247 (510)
T KOG3574|consen  186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN------DESVD----EEL--------  247 (510)
T ss_pred             cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC------chhhh----hhh--------
Confidence            654322221     0  011         1223334444444444444432221      11100    000        


Q ss_pred             CCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh
Q 010692          243 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA  322 (503)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (503)
                                     +           ...++..+-++++++-|............-.++.+-....+.-+.+ .|.+..
T Consensus       248 ---------------~-----------~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke  300 (510)
T KOG3574|consen  248 ---------------E-----------LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKE  300 (510)
T ss_pred             ---------------h-----------cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChh
Confidence                           0           1112223456777777777777766666666776767777776666 466644


Q ss_pred             hHHHHHhhhhhhhhchhhhhhhhhcccc--cchhh--HHHH--HHHHHHHHHHHHHHHHhhh---------HHHHHHHHH
Q 010692          323 DMMFGGVTIVCGIVGTISGGFILDQMGA--TISNA--FKLL--SAATFLGAISCLTAFCLSS---------LYGFLALFT  387 (503)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  387 (503)
                      ...+   ..+..++..+..+++..|+-.  |+...  +.+.  ++......+..........         ...++....
T Consensus       301 ~Lal---~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~  377 (510)
T KOG3574|consen  301 ELAL---IAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYA  377 (510)
T ss_pred             Hhee---eeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHH
Confidence            3321   223444445555555555432  11100  0111  1111111111111111111         111222233


Q ss_pred             HHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692          388 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV  443 (503)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~  443 (503)
                      +.+.+....+...++..++..+|...|+.+.+.|+..++ |+-.-..+..++.|..
T Consensus       378 ~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~l  432 (510)
T KOG3574|consen  378 FHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADGL  432 (510)
T ss_pred             HhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhcccC
Confidence            444444455556777788889999999999999999999 6554555777887754

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=98.66  E-value=3.8e-05  Score=72.10  Aligned_cols=383  Identities=9%  Similarity=-0.024  Sum_probs=176.1

Q ss_pred             chhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHH-H--HHHHHHHHHhHHHHhhhhcCCchhHHH-HHHHH
Q 010692           38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSS-A--FMVGLLVASPIFASLAKSHNPFRLIGV-GLSVW  113 (503)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s-~--~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~  113 (503)
                      ++.+..++.+..++......|.++.++.  -+.|.+|.|.+.- .  |++=..-+.++=.....|+||||.-++ .-.+.
T Consensus         4 lL~~LY~lQGiP~GL~~gsiPflL~~~~--~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~   81 (544)
T PF13000_consen    4 LLVLLYFLQGIPLGLAFGSIPFLLQSMA--KKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS   81 (544)
T ss_pred             HHHHHHHHcCcccccccccchhhhcccc--CCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence            3455566666655555455555542222  4567777765422 1  222222233333344459999995332 22222


Q ss_pred             HHHHHHhhhhh----------------------HH--HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHh
Q 010692          114 TFATAGCGSSF----------------------DF--WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM  169 (503)
Q Consensus       114 ~~~~~~~~~~~----------------------~~--~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~  169 (503)
                      ++..+..+..-                      ++  ..+...-++.=+-++.--.+.-.+.-....+++++.|......
T Consensus        82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv  161 (544)
T PF13000_consen   82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV  161 (544)
T ss_pred             HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence            22222222111                      11  1122222222222222333444455555677889998888888


Q ss_pred             HHhHHHHHHHHHHHhhcCc----------------chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccc
Q 010692          170 CIPTGVALGYVYGGVVGSH----------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS  233 (503)
Q Consensus       170 ~~~~G~~~g~~l~~~l~~~----------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  233 (503)
                      +.+.|..++..+.-.+.+.                ..-..-..+.+.+.++..+...++.+|.+.....++..+ ...++
T Consensus       162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~-~~~~~  240 (544)
T PF13000_consen  162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEP-INKSD  240 (544)
T ss_pred             HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccc-ccccc
Confidence            8888888877665444321                111222234444445555555555554332211111010 00000


Q ss_pred             cccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchh
Q 010692          234 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG  313 (503)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (503)
                              +..++...+..+.....       .......++..+.+.+++|-|.+..+.+.....-.++...-.-...-+
T Consensus       241 --------~~~~~~~~~~~~~~~~~-------~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKL  305 (544)
T PF13000_consen  241 --------GKSKEISIEYDESDVIS-------TEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKL  305 (544)
T ss_pred             --------ccccccceecccccccc-------hhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHH
Confidence                    00000000000000000       000122333445566778888888777766666665555444444444


Q ss_pred             hhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchh----------------hHHHHH----------HHHHHHH
Q 010692          314 YNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN----------------AFKLLS----------AATFLGA  367 (503)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------------~~~~~~----------~~~~~~~  367 (503)
                      .+ .|++.....+.   .+..++..++.++++.|+-+..+.                ..+.++          .+...-.
T Consensus       306 lE-kG~~KE~LAl~---~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL  381 (544)
T PF13000_consen  306 LE-KGLSKEDLALL---VLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRL  381 (544)
T ss_pred             HH-cCCCHHHhHHH---HHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence            44 56665444222   233444455555555554322110                001111          1111001


Q ss_pred             HHHHHH----HHhh-----hHH---HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692          368 ISCLTA----FCLS-----SLY---GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL  435 (503)
Q Consensus       368 ~~~~~~----~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~  435 (503)
                      ...++.    ...+     +.+   .++...++..+.....+....+.-++...|..-|+.+.+.|+..|+ |+-.-..+
T Consensus       382 ~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~  460 (544)
T PF13000_consen  382 VAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTF  460 (544)
T ss_pred             HHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHH
Confidence            111110    1111     111   1222233344444456667777888888999999999999999999 66654545


Q ss_pred             HHHHHhhh
Q 010692          436 VGVLQDHV  443 (503)
Q Consensus       436 ~g~l~~~~  443 (503)
                      .=++.|..
T Consensus       461 vL~lVD~f  468 (544)
T PF13000_consen  461 VLWLVDYF  468 (544)
T ss_pred             HHHHhhhc
Confidence            55666643

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.62  E-value=2.2e-06  Score=78.73  Aligned_cols=149  Identities=19%  Similarity=0.166  Sum_probs=125.3

Q ss_pred             ccc-ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh-hcCCchhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHH
Q 010692           62 TPK-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-SHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLV  136 (503)
Q Consensus        62 ~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~  136 (503)
                      .|. .+-||+|..|...+.+....|..++-...|++.. |.++|+...+++....++..+..+   ..+.+.+..+-++.
T Consensus       232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~  311 (403)
T PF03209_consen  232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL  311 (403)
T ss_pred             CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            444 4668999999999999999999999999999987 678888888888888777766544   46788999999999


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC----------cchhHHHHHHHHHHHHHHH
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFA  206 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f~~~~~~~~~~~  206 (503)
                      |++.|.+.....+.+.|...+++.|..+|.+.....++..+|..+++.+.|          ..+|-.+|.+.++..++..
T Consensus       312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~  391 (403)
T PF03209_consen  312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL  391 (403)
T ss_pred             HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987643          2367888888877665555


Q ss_pred             HHHH
Q 010692          207 VLAF  210 (503)
Q Consensus       207 ~~~~  210 (503)
                      .+..
T Consensus       392 ~ll~  395 (403)
T PF03209_consen  392 VLLG  395 (403)
T ss_pred             HHHH
Confidence            5443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.61  E-value=3.4e-07  Score=88.09  Aligned_cols=146  Identities=19%  Similarity=0.283  Sum_probs=114.2

Q ss_pred             hcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHH
Q 010692          316 IYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELL  392 (503)
Q Consensus       316 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  392 (503)
                      .+..+..+ ..+.+....+.+++.+.+|++.||+|.|     +++..+.++.++..++.....  +.+.+++.=++-|++
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~  141 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG  141 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence            45555433 3555677889999999999999999999     777777777666665555443  334556666778888


Q ss_pred             HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 010692          393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG  467 (503)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  467 (503)
                      .+..++....+..+-.|+++|++..++.....++ |.+++-++.|++.+...+|...|++.+++.++..++++..
T Consensus       142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~  215 (466)
T KOG2532|consen  142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF  215 (466)
T ss_pred             HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999877777 8888888999999983349999999988877766666543

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=98.59  E-value=6.8e-06  Score=81.01  Aligned_cols=154  Identities=14%  Similarity=0.084  Sum_probs=122.4

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhH------------
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD------------  125 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~------------  125 (503)
                      .++.-+.++++.+...+.-.++.+.-......+.++.++|-| ||-+++.++.++..+|..+..++..            
T Consensus        59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~  138 (571)
T KOG1237|consen   59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK  138 (571)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence            333555788888887888888899999999999999999987 9999999999999888765544311            


Q ss_pred             -------------HHHHHHHHHHHHhhhhhhhhchhhhhhccCC---CC---CchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692          126 -------------FWSIAICRMLVGVGEASFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVG  186 (503)
Q Consensus       126 -------------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~  186 (503)
                                   ...++.+.-+..+|.|+.-+...++-+|-++   ++   ++...+.++....++|..++..+-.+.-
T Consensus       139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq  218 (571)
T KOG1237|consen  139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ  218 (571)
T ss_pred             CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence                         2356677778888999999999999999998   32   2336788999999999999999988888


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          187 SHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       187 ~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ++.+|.+.|.+..+..++..++.+..
T Consensus       219 ~~~~w~lgf~i~~~~~~lai~iF~~g  244 (571)
T KOG1237|consen  219 DNVGWKLGFGIPTVLNALAILIFLPG  244 (571)
T ss_pred             hcccceeeccHHHHHHHHHHHHHHcC
Confidence            88899999999887766555554443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.59  E-value=1.1e-06  Score=83.04  Aligned_cols=123  Identities=17%  Similarity=0.100  Sum_probs=100.9

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~  142 (503)
                      ..-+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++..+.+  +.+.+++..++.++|.+.
T Consensus       264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~  343 (467)
T COG2211         264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGI  343 (467)
T ss_pred             EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhc
Confidence            334555666667788888888888899999999999999999999999999999988876  788889999999999999


Q ss_pred             hhhchhhhhhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcC
Q 010692          143 FISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGS  187 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~  187 (503)
                      ..+...++++|..+-       +.-|...+......=+|.+++..+.++..+
T Consensus       344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~  395 (467)
T COG2211         344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG  395 (467)
T ss_pred             cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999887642       223667777777777888888877766553

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=98.55  E-value=2.7e-07  Score=92.15  Aligned_cols=130  Identities=15%  Similarity=0.153  Sum_probs=109.4

Q ss_pred             HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHh
Q 010692          325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC  404 (503)
Q Consensus       325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (503)
                      ...++..++..+|.++.|.++||+|||     +.+..+.++..++.+.....++.+..++.=++.|++.+........+.
T Consensus       122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~  196 (521)
T KOG0255|consen  122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV  196 (521)
T ss_pred             HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence            445778889999999999999999999     888888888888888888889999999999999999999999999999


Q ss_pred             hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692          405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       405 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  464 (503)
                      .|.++++.|+.+..+ ....+. ++..+|...+++..   +|+..+++......+..++.
T Consensus       197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~  251 (521)
T KOG0255|consen  197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLW  251 (521)
T ss_pred             eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999 566666 66667888888877   47788877766655555543

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.55  E-value=4.3e-07  Score=87.68  Aligned_cols=135  Identities=20%  Similarity=0.172  Sum_probs=106.8

Q ss_pred             HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHh
Q 010692          325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC  404 (503)
Q Consensus       325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (503)
                      ...+++.++.+++.+.++.+.||++-.     +.+....+...+..++....++.+.+++.-++.|++.+..+|....++
T Consensus        85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l  159 (495)
T KOG2533|consen   85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL  159 (495)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence            455788899999999999999999954     555555555555554555578888999999999999999999999999


Q ss_pred             hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-----hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       405 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      ..-+.+++|+..+|+.+....+ |+++|+++...+.+     ..-+|++.|++-+++.++..++.+
T Consensus       160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f  224 (495)
T KOG2533|consen  160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF  224 (495)
T ss_pred             HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence            9999999999999999887777 88888877766532     122488999998877666655444

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.54  E-value=2.5e-06  Score=77.64  Aligned_cols=128  Identities=11%  Similarity=0.035  Sum_probs=99.5

Q ss_pred             cccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---hhHHHHH
Q 010692          308 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFL  383 (503)
Q Consensus       308 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  383 (503)
                      -+-..+++.++.+..+. .+......+..+..+..+++.+|++.|     +-++.+..+.++.+.++...   .+...++
T Consensus        34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~FL  108 (422)
T COG0738          34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGFFL  108 (422)
T ss_pred             hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence            33346677788887555 556777788899999999999999999     66666777766666665433   3455666


Q ss_pred             HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      +.+++.+.+.+......+.++...-+++....-+.+.+.++.+ |++++|.+++.+..
T Consensus       109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lil  165 (422)
T COG0738         109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLIL  165 (422)
T ss_pred             HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Confidence            6677777777777778888888888888888888898888888 99999999999887

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.54  E-value=9.5e-07  Score=70.81  Aligned_cols=108  Identities=9%  Similarity=0.111  Sum_probs=93.5

Q ss_pred             hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692           77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP  156 (503)
Q Consensus        77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~  156 (503)
                      .-.++......+.+++.+.+.+++|.|+.+++|.+.+.+-... -+-++.+.++.+-.+.|++.+..++....++.+...
T Consensus        41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~  119 (156)
T PF05978_consen   41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST  119 (156)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence            3466777778889999999999999999999999999865444 356788899999999999999999999999999999


Q ss_pred             CCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692          157 VPQKTAWLSMFYMCIPTGVALGYVYGGVV  185 (503)
Q Consensus       157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l  185 (503)
                      +++|++..+++......+.++|.++...+
T Consensus       120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998888887765444

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PRK11462 putative transporter; Provisional

Probab=98.49  E-value=2.1e-06  Score=83.86  Aligned_cols=151  Identities=13%  Similarity=0.057  Sum_probs=98.9

Q ss_pred             HHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 010692          293 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL  371 (503)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~  371 (503)
                      +.-+........+..|+..|+.+..|.++... .+..+.-+...+.-++.|.++||...|.+++|..+..+.....+...
T Consensus        16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~   95 (460)
T PRK11462         16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV   95 (460)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence            33344445555666788888899999997655 33455557778889999999999876666666777666555554444


Q ss_pred             HHHHhhh------HHHHHHHHHHHHHHHhhccchhhHHhhcccCC-CCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692          372 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN  444 (503)
Q Consensus       372 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g  444 (503)
                      +.+..+.      .....+..++...+......|..++..+..+. ++|++..+.......+ |..+++.+...+.+..|
T Consensus        96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~i-G~~~~~~~~~plv~~~g  174 (460)
T PRK11462         96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATA-GGMLSTVLMMPLVNLIG  174 (460)
T ss_pred             HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence            4443221      22233344445556666666777888877764 8999999988766666 76667666555554443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=98.39  E-value=2.6e-07  Score=64.50  Aligned_cols=73  Identities=27%  Similarity=0.376  Sum_probs=66.8

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA  130 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~  130 (503)
                      .+++|.+++|.++|.++.|++.+++.+||.+|.+...++.++..+++.+..+++...+..+.+++.++++...
T Consensus        12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~   84 (85)
T PF06779_consen   12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS   84 (85)
T ss_pred             HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence            3445888999999999999999999999999999999999998889999999999999999999999887653

Note that many members are hypothetical proteins.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=98.38  E-value=0.0003  Score=68.03  Aligned_cols=244  Identities=14%  Similarity=0.112  Sum_probs=136.4

Q ss_pred             ccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---------------------------
Q 010692           72 NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------------------------  123 (503)
Q Consensus        72 ~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------------------------  123 (503)
                      ++.+..+=....+ +..+...+..+++++++|.+++-+....+.....++++.                           
T Consensus        57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~  136 (491)
T PF03219_consen   57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG  136 (491)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence            3444555443344 444567778999999999998887777776666666552                           


Q ss_pred             ----hHHHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC---------cc
Q 010692          124 ----FDFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------HL  189 (503)
Q Consensus       124 ----~~~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---------~~  189 (503)
                          -+.|.+.+.-++.-+-+....+ .-..+..|.++.+|-.|..+++..+.++|.+++..+...+.+         ..
T Consensus       137 ~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~  216 (491)
T PF03219_consen  137 FIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVD  216 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence                0123333333333332233322 457888999999999999999999999999999988887776         22


Q ss_pred             hhHHHHHHHHHHHHHHH---HHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchh
Q 010692          190 NWRYAFWGEAILMLPFA---VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES  266 (503)
Q Consensus       190 gwr~~f~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (503)
                      .|.........+.++..   +.......+....  +++..+.                         ...+  +++    
T Consensus       217 ~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~--~~~~~~~-------------------------~~~~--kk~----  263 (491)
T PF03219_consen  217 AWELSLNSLMGIVLILGIVIILLYRYMNKNVLT--DPRFYPS-------------------------AKKK--KKK----  263 (491)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--ccccchh-------------------------hhcc--ccc----
Confidence            46544322221111111   1122222111000  0000000                         0000  000    


Q ss_pred             hhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh-hH---HHHHhhhhhhhhchhhhh
Q 010692          267 RFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM---MFGGVTIVCGIVGTISGG  342 (503)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~g  342 (503)
                         +......++++.++++|.+..+.+...+++...+.+..-.-..+++.+..+.+ +.   .+....++..++..++++
T Consensus       264 ---k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~  340 (491)
T PF03219_consen  264 ---KPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSS  340 (491)
T ss_pred             ---CCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               11123346788889999999888877777777666554333344443332211 11   223344455555567788


Q ss_pred             hhhhccccc
Q 010692          343 FILDQMGAT  351 (503)
Q Consensus       343 ~l~d~~~~~  351 (503)
                      .+.+|+|-+
T Consensus       341 ~iir~~GW~  349 (491)
T PF03219_consen  341 NIIRRFGWR  349 (491)
T ss_pred             HHHHHhhHH
Confidence            888888876

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=98.24  E-value=2e-05  Score=74.98  Aligned_cols=109  Identities=19%  Similarity=0.198  Sum_probs=89.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhhh---------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCC---CchhHHHHHHhHH
Q 010692          104 RLIGVGLSVWTFATAGCGSSF---------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI  171 (503)
Q Consensus       104 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~  171 (503)
                      |+++++.+++.+|.++..++.         +.+.++++-.+.++|.|+.-|...++.+|-++++   +|.+.+.++..+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            567888899999998855542         2367889999999999999999999999999876   3667888999999


Q ss_pred             hHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          172 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       172 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ++|..++..+.+++.++.||.+.|.+.++..++..+..+.-
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~  122 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG  122 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999998776666554443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=98.24  E-value=0.0019  Score=60.93  Aligned_cols=126  Identities=10%  Similarity=0.056  Sum_probs=89.3

Q ss_pred             cccccccCCC---ccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------------
Q 010692           62 TPKRGDFKLN---NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------  123 (503)
Q Consensus        62 ~~i~~~~~~s---~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------  123 (503)
                      ..+.+.+.++   ++.+.++=+...+ +..+..++.+++.+++.+.+++-.-+..+....+++++.              
T Consensus        47 R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~  126 (509)
T COG3202          47 RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF  126 (509)
T ss_pred             HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence            5556766654   4456666677777 677888999999999999999888888888777777763              


Q ss_pred             -h--------H---------HHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692          124 -F--------D---------FWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV  184 (503)
Q Consensus       124 -~--------~---------~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~  184 (503)
                       .        +         .|..-+.-.+.-+=.+.... .-.....|.+..+|-.|..+.++.+.+++..++..+..+
T Consensus       127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~  206 (509)
T COG3202         127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW  206 (509)
T ss_pred             HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence             1        0         12222222222222222222 455677899998999999999999999999999998888


Q ss_pred             hcC
Q 010692          185 VGS  187 (503)
Q Consensus       185 l~~  187 (503)
                      +.+
T Consensus       207 ~~k  209 (509)
T COG3202         207 LSK  209 (509)
T ss_pred             Hhh
Confidence            875

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=98.24  E-value=0.00033  Score=67.32  Aligned_cols=56  Identities=13%  Similarity=0.039  Sum_probs=36.9

Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      ++.+..++..++.++..|......+....+.+++++|..+..+...+... |-.+|.
T Consensus       370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~-Gl~~Gs  425 (437)
T TIGR00939       370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV-GLALGA  425 (437)
T ss_pred             cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            34555666677777777766666666777778888887777776555544 544444

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=98.22  E-value=5.7e-06  Score=82.24  Aligned_cols=133  Identities=17%  Similarity=0.107  Sum_probs=103.7

Q ss_pred             HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHH
Q 010692          324 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV  403 (503)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (503)
                      ..+.+...++..++.++.|+++|++|||     ..+..+.++..+..++.....+...+.+.=++.|++.+......+.+
T Consensus        92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy  166 (513)
T KOG0254|consen   92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY  166 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence            3666788899999999999999999999     78888888877777777777888888888899999988888888888


Q ss_pred             hhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh-hhHHHHHHHHHHHHHHHHHH
Q 010692          404 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       404 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~  463 (503)
                      ..|..|++.||...+..+..... |..++ .+.+...+.. .+|+..+....+..++..+.
T Consensus       167 ~sEiap~~~RG~l~~~~~l~~~~-Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~  225 (513)
T KOG0254|consen  167 ISEIAPAHIRGTLVSLYQLFITI-GILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG  225 (513)
T ss_pred             HhhcCChhhhHHHHHHHHHHHHH-HHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence            88988889999999999877775 77766 4556555443 23775555555544444443

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.18  E-value=7.7e-08  Score=94.34  Aligned_cols=128  Identities=14%  Similarity=0.123  Sum_probs=94.2

Q ss_pred             HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHhhccchhh
Q 010692          325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN  401 (503)
Q Consensus       325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  401 (503)
                      ...+...++.++|.++.|++.||+|||     +.+..+.++..+..++....+   +.+.+.+.-++.|++.+...+...
T Consensus        50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~  124 (451)
T PF00083_consen   50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP  124 (451)
T ss_pred             HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            455777899999999999999999999     677666666666666666666   777777777888888888888899


Q ss_pred             HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh---hHHHHHHHHHHHHHH
Q 010692          402 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIFFL  459 (503)
Q Consensus       402 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~  459 (503)
                      .++.|..|++.|+...++.+..... |..++..+. +......   .|+..+.+..+..++
T Consensus       125 ~~~~E~~~~~~R~~~~~~~~~~~~~-G~~~~~~~~-~~~~~~~~~~~Wr~~~~~~~~~~l~  183 (451)
T PF00083_consen  125 IYISEIAPPKHRGFLSSLFQLFWAL-GILLASLIG-YIVSYYSDNWGWRILLIFGAIPSLL  183 (451)
T ss_pred             ccccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccc
Confidence            9999999999999999988766555 777666443 3222222   265555555544433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=98.03  E-value=2.9e-06  Score=78.28  Aligned_cols=129  Identities=9%  Similarity=-0.071  Sum_probs=97.1

Q ss_pred             HHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH-H---HHHHHHHHHHHhhhh-hhhhchhhhhhccCCCCCchh
Q 010692           88 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-F---WSIAICRMLVGVGEA-SFISLAAPFIDDNAPVPQKTA  162 (503)
Q Consensus        88 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~---~~l~~~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~  162 (503)
                      .+..+...+.|+.|||++.+.|.+++++..+..+...| .   ..+++.-.+..+... +-......+-+|.+|.+-|+.
T Consensus       363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t  442 (538)
T KOG0252|consen  363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRST  442 (538)
T ss_pred             CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhh
Confidence            36667778899999999999999999999999988876 1   112222222222111 122344566799999999999


Q ss_pred             HHHHHHhHHhHHHHHHHHHHHhhcC-----cchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          163 WLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       163 ~~~~~~~~~~~G~~~g~~l~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      .-|+.....-.|.++|...-..+.+     ..+.|+++++.+.+.++..+..++ .||+.
T Consensus       443 ~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk  501 (538)
T KOG0252|consen  443 CHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL-IPETK  501 (538)
T ss_pred             hhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE-eeccc
Confidence            9999999999999999999999988     778999999999887666555444 46643

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.01  E-value=9.9e-05  Score=64.48  Aligned_cols=133  Identities=13%  Similarity=0.165  Sum_probs=75.1

Q ss_pred             HHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh-
Q 010692          299 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-  376 (503)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  376 (503)
                      ....+.+..|.|.+ ++..+.+..+. .+.....++..+| +..|.+.|++|.+     ..+.++.+............ 
T Consensus        15 ~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~   87 (250)
T PF06813_consen   15 SGTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAV   87 (250)
T ss_pred             cCcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHH
Confidence            33455666676655 45678886655 4555556666664 7889999999987     55655555555554444332 


Q ss_pred             h------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692          377 S------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       377 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                      .      +.|......++.+.+.............+.+ |++||++.|+.-...++ ++.+-..+...+.
T Consensus        88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GL-Saai~t~i~~~~f  155 (250)
T PF06813_consen   88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGL-SAAIFTQIYSAFF  155 (250)
T ss_pred             hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHh-HHHHHHHHHHHHc
Confidence            1      2223322233332222222233333344566 46899999999877777 4433333333333

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.99  E-value=1.4e-05  Score=55.65  Aligned_cols=52  Identities=21%  Similarity=0.189  Sum_probs=46.0

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW  113 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~  113 (503)
                      +...++.|+|..|+|.+.++..+...++++++|.++||+|+++.++....++
T Consensus        24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~   75 (77)
T PF12832_consen   24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM   75 (77)
T ss_pred             hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence            4445789999999999999999999999999999999999999877766554

>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]

Probab=97.91  E-value=0.00027  Score=61.88  Aligned_cols=136  Identities=10%  Similarity=-0.089  Sum_probs=92.3

Q ss_pred             hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692           75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN  154 (503)
Q Consensus        75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~  154 (503)
                      .|.+.-+-.+...+..+.+..+.||+---+=..+..++.+.+..+.+++++.++=+++-.+..++.|.....-.++-+. 
T Consensus        64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-  142 (409)
T KOG3880|consen   64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-  142 (409)
T ss_pred             cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence            4555566666677777777788888743333445667778888999999999999999999888888766554444333 


Q ss_pred             CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC--cchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +++    ...+.++.+.+.+.++|..--..+.+  .+.-|...++...+-++.+...++.+++
T Consensus       143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~  201 (409)
T KOG3880|consen  143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS  201 (409)
T ss_pred             CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence            332    34555666666666777665555554  3456788888877777777766666643

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=97.86  E-value=0.00055  Score=65.96  Aligned_cols=122  Identities=11%  Similarity=0.040  Sum_probs=110.1

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHH-HhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFA-SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS  142 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~  142 (503)
                      +...+++++.+.+.+.+.......+++++.. .+...+|-|+++..|++.-.+...+.+++++.|+++...++.++.. .
T Consensus       268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~  346 (463)
T KOG2816|consen  268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-I  346 (463)
T ss_pred             EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-c
Confidence            3778999999999998888888888888888 7777889999999999999999999999999999999999888766 4


Q ss_pred             hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692          143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG  186 (503)
Q Consensus       143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~  186 (503)
                      ..|...+.++.+.+++++|+++++....-.+...++|.+-+.+.
T Consensus       347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~  390 (463)
T KOG2816|consen  347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF  390 (463)
T ss_pred             hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence            78889999999999999999999999999999999998877664

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=97.75  E-value=0.00055  Score=65.33  Aligned_cols=135  Identities=12%  Similarity=0.092  Sum_probs=76.3

Q ss_pred             HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHHHhhccch
Q 010692          325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----S-SLYGFLALFTVGELLVFATQAP  399 (503)
Q Consensus       325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~  399 (503)
                      ...+...++..++.++.|+...|.+.-+    +.++.+.+++++..++....    + ..+..++.-++.|++. .....
T Consensus        75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~  149 (488)
T KOG2325|consen   75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAV  149 (488)
T ss_pred             HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHH
Confidence            4445677899999999999999988521    34444444444444333221    2 3344444444444443 23345


Q ss_pred             hhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh------------hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          400 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      .-.++++..-+++|.++.+..+...-+ |.++||.+...+..            .++.|..+-++.++..++..++..
T Consensus       150 lR~Y~a~~s~~~dR~rA~a~~~~~~vl-g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~  226 (488)
T KOG2325|consen  150 LRAYIADASTVEDRPRAFAATSGGFVL-GIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL  226 (488)
T ss_pred             HHHHHHhccCccchHHHHHHhhhHHHH-HHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence            566677766667888888877543333 77777755433321            112355556666555555554443

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=97.74  E-value=0.00036  Score=70.47  Aligned_cols=159  Identities=12%  Similarity=-0.003  Sum_probs=97.4

Q ss_pred             hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHhh--
Q 010692          302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLS--  377 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  377 (503)
                      ++++...+..|+.+..+.+...+ .+........-+..+++|++.|+ +|++     +.+..+.++..+...++....  
T Consensus         3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~   77 (654)
T TIGR00926         3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP   77 (654)
T ss_pred             eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence            34455555666666677775433 22233333344556788999996 5665     555444444444433332211  


Q ss_pred             ------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhh----
Q 010692          378 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN----  444 (503)
Q Consensus       378 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g----  444 (503)
                            .....+..+.+...+.+..-+...+...+.++++   .+.....++....++ |+.+++.+.+++.+..+    
T Consensus        78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~  156 (654)
T TIGR00926        78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGC  156 (654)
T ss_pred             ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Confidence                  1123445566666777777788888888887653   366778888888888 88888889998875532    


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHH
Q 010692          445 --NWRKTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       445 --~~~~~~~~~~~~~~~~~~~~~~  466 (503)
                        +|..+|.+.+++.+++.++...
T Consensus       157 ~~~~~~aF~i~~i~m~ia~lvf~~  180 (654)
T TIGR00926       157 QDCYPLAFGVPAILMILALIVFMA  180 (654)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHH
Confidence              3666777666666666555443

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.68  E-value=0.0026  Score=54.97  Aligned_cols=55  Identities=11%  Similarity=0.050  Sum_probs=37.8

Q ss_pred             CCchhHHHHHHhHHhHHHHHHHHHHHhh---c--CcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          158 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       158 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      ++|+....+...+.++|.++.-+.--.-   .  ..-.|++++.+.+++.++-+++..++
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if   61 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF   61 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5677778888888899987765443221   1  12259999999998877666665555

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=97.47  E-value=0.0071  Score=56.21  Aligned_cols=110  Identities=14%  Similarity=0.009  Sum_probs=54.8

Q ss_pred             hccccchhhhhcccch----hhHHHHHh-hhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH-HHHHHHHH-------
Q 010692          306 SYWGPKAGYNIYHMSN----ADMMFGGV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATF-LGAISCLT-------  372 (503)
Q Consensus       306 ~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~-------  372 (503)
                      ....|-+..+..+...    .......+ ..+...+|.....++-++-.|.      +.+.+.. ...+..+.       
T Consensus       263 LsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~------l~i~v~lR~lfiPlF~~cn~~~~  336 (406)
T KOG1479|consen  263 LSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRK------LTIPVLLRLLFIPLFLLCNYPPL  336 (406)
T ss_pred             eEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCce------ehHHHHHHHHHHHHHHHhccCCC
Confidence            3455666555432221    11223333 6677777766666655543232      2221111 11111111       


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHH
Q 010692          373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST  421 (503)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  421 (503)
                      .....+.+..+....+.++..|-.....+.+..+.++++++-.+-.+..
T Consensus       337 ~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~  385 (406)
T KOG1479|consen  337 PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMV  385 (406)
T ss_pred             CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHH
Confidence            1123455666666677777666555556667777777766655555543

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.44  E-value=0.0058  Score=55.75  Aligned_cols=144  Identities=15%  Similarity=0.052  Sum_probs=81.4

Q ss_pred             hhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 010692          315 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV  393 (503)
Q Consensus       315 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (503)
                      +.+|.+..+. .+.....+.+.+...+.|.+.||+|||     +..+...++....++.- ..++.+.+++.=++.|...
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaT  135 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIAT  135 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHH
Confidence            3577776554 333344456667777889999999999     77776666666666533 3355666666666777766


Q ss_pred             hhccchhhHHhh-cc----cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh-HHHHHHHHHHHHHHHHHHH
Q 010692          394 FATQAPVNYVCL-HS----VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGIW  464 (503)
Q Consensus       394 ~~~~~~~~~~~~-~~----~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~  464 (503)
                      ...+...-++.. |.    +|++..+...+......+.+-++.+..+..++.+..+. ...+|.....+.+++.++.
T Consensus       136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I  212 (354)
T PF05631_consen  136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI  212 (354)
T ss_pred             HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence            655554444433 32    33343444444433122221334445455566665542 3456666666655555443

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=97.23  E-value=0.0034  Score=58.62  Aligned_cols=123  Identities=15%  Similarity=0.080  Sum_probs=69.2

Q ss_pred             hhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh--h----hHH--HHH
Q 010692          312 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S----SLY--GFL  383 (503)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~--~~~  383 (503)
                      +..+.++.+.....+..++.+.+++..+.+.|+.||+|-|     .....+.....+...+=...  +    ..+  ...
T Consensus        70 ~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~  144 (480)
T KOG2563|consen   70 YVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH  144 (480)
T ss_pred             HHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence            5566667444455677788889999999999999999998     55544444444443322221  1    122  222


Q ss_pred             HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692          384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                      ..-.+.....-.....-.-+...-+++++|+++..+..+.+.+ |..++..+.+.+.
T Consensus       145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~L-Gvavg~llppilV  200 (480)
T KOG2563|consen  145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPL-GVAVGFLLPPILV  200 (480)
T ss_pred             HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchH-HHHHHhhccceec
Confidence            2222222222111111123344457889999999988665545 5555544444443

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.14  E-value=0.029  Score=52.78  Aligned_cols=157  Identities=10%  Similarity=-0.063  Sum_probs=93.5

Q ss_pred             hhhhhccccchhhhh-cccchhhHH--HHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692          302 IGAYSYWGPKAGYNI-YHMSNADMM--FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS  378 (503)
Q Consensus       302 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (503)
                      +--...++..|+.+. .+.+..+..  +.-+..-..++..+....+.|.++.|     .+++...+...+...++....+
T Consensus        19 frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~s   93 (412)
T PF01770_consen   19 FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTS   93 (412)
T ss_pred             cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCc
Confidence            334455666777776 777754431  11111123344556778899999998     7777777766666666666667


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh-hhhHHHHHHHHHHHH
Q 010692          379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-VNNWRKTTLALTSIF  457 (503)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~  457 (503)
                      ....-+.-++.|.... .-...++++-..+++++--++.+......-. |..++..++-.+... ..+|.....+.....
T Consensus        94 v~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~-g~~~s~~lgQllvs~~~~sy~~L~~isl~~~  171 (412)
T PF01770_consen   94 VLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLV-GRFISSLLGQLLVSFGGVSYFQLNYISLASV  171 (412)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            6666666666655543 3445567777778887777777777655555 766666555555542 223444444444444


Q ss_pred             HHHHHHHH
Q 010692          458 FLAAGIWF  465 (503)
Q Consensus       458 ~~~~~~~~  465 (503)
                      .++.+..+
T Consensus       172 ~~a~~~~~  179 (412)
T PF01770_consen  172 SLALLIAL  179 (412)
T ss_pred             HHHHHHHH
Confidence            44444444

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=97.09  E-value=0.002  Score=62.40  Aligned_cols=143  Identities=13%  Similarity=0.004  Sum_probs=107.0

Q ss_pred             CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHHHHhh
Q 010692           70 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRMLVGVG  139 (503)
Q Consensus        70 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~g  139 (503)
                      .++...|.+..+..++..++..+..+..-+..-|+++....++.++..+.-..          .++.+-.+.--++..+.
T Consensus       252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~  331 (433)
T PF03092_consen  252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI  331 (433)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence            78888899998899999999999988888888899988888887776664221          12333334455666666


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--------hHHHHHHHHHHHHHHHHHHHh
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLPFAVLAFV  211 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~  211 (503)
                      ....+-....+++|..|+..-|...+++.+..++|..++..++..+.+.++        -.+..++..+..++...+..+
T Consensus       332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l  411 (433)
T PF03092_consen  332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL  411 (433)
T ss_pred             HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence            667777788899999999999999999999999999999999988875443        234555556555444444334


Q ss_pred             c
Q 010692          212 I  212 (503)
Q Consensus       212 ~  212 (503)
                      +
T Consensus       412 L  412 (433)
T PF03092_consen  412 L  412 (433)
T ss_pred             c
Confidence            3

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=96.95  E-value=0.0054  Score=57.47  Aligned_cols=111  Identities=12%  Similarity=0.059  Sum_probs=80.4

Q ss_pred             CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH--HHHHH---HHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692           71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS--VWTFA---TAGCGSSFDFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~--~~~~~---~~~~~~~~~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      ...+..+....|.+|-.++.--...+  |+  |++.+.+.+  +..+.   ....-+.++.|.+++.-+..|+.+|..++
T Consensus       279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV  354 (402)
T PF02487_consen  279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV  354 (402)
T ss_pred             HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence            35567777778887766654322211  33  333333322  22222   22334568999999999999999999999


Q ss_pred             chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692          146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV  185 (503)
Q Consensus       146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l  185 (503)
                      .....+.|-.++++|..+++....+-++|..++.+++-.+
T Consensus       355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l  394 (402)
T PF02487_consen  355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL  394 (402)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999887554

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF12832 MFS_1_like: MFS_1 like family

Probab=96.85  E-value=0.0037  Score=43.47  Aligned_cols=59  Identities=15%  Similarity=0.219  Sum_probs=47.8

Q ss_pred             HHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692          293 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI  352 (503)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~  352 (503)
                      ...+++......+.-++|.|+++ .|.++.+. .+.++..+..+++.++.|+++||.++++
T Consensus         7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~   66 (77)
T PF12832_consen    7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK   66 (77)
T ss_pred             HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence            34566777777888899999987 67776655 5567778899999999999999999983

>PRK03612 spermidine synthase; Provisional

Probab=96.81  E-value=0.019  Score=56.75  Aligned_cols=140  Identities=11%  Similarity=-0.089  Sum_probs=83.3

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHH---HHHHHh----hhhhHH-HHHHHHHHHH
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT---FATAGC----GSSFDF-WSIAICRMLV  136 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~----~~~~~~-~~l~~~r~l~  136 (503)
                      ..-+|-+..+.+.+.+++++|.++|+.+++++.++--++. ..+-+.+..   ++..+.    ++...+ ..++..-++.
T Consensus        42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  120 (521)
T PRK03612         42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI  120 (521)
T ss_pred             HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456778888899999999999999999998874332222 111111111   111111    111111 2223445566


Q ss_pred             HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHH
Q 010692          137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFA  206 (503)
Q Consensus       137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~  206 (503)
                      |+..|+..|....+..+... ++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++.+
T Consensus       121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a  190 (521)
T PRK03612        121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA  190 (521)
T ss_pred             HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            77788787777666654322 23567788889999999999999887654 45564434434444433333

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=96.79  E-value=0.016  Score=46.74  Aligned_cols=100  Identities=7%  Similarity=-0.066  Sum_probs=73.2

Q ss_pred             HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692          328 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS  407 (503)
Q Consensus       328 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (503)
                      .+......+..++.+.+.+++|.|     +.++++.+...+.... ....+.+..+....+.|++.+..+...-.++.+.
T Consensus        44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~  117 (156)
T PF05978_consen   44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY  117 (156)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence            455566677788899999999998     6666666555544433 3345667777888888888888888888888887


Q ss_pred             cCCCCchhHHHHHHHHHhhcccccchh
Q 010692          408 VKPSLRALSMAISTVSIHIFGDVPSSP  434 (503)
Q Consensus       408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~  434 (503)
                      ..++.+++-.++....... +.++|..
T Consensus       118 s~~~~~~~~~~ifw~i~~~-s~i~G~~  143 (156)
T PF05978_consen  118 STEETIGRNTGIFWAIFQS-SLIFGNL  143 (156)
T ss_pred             CCHHHHhhHHHHHHHHHHH-HHHHHHH
Confidence            7778888888888766665 5555543

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.47  E-value=0.17  Score=49.14  Aligned_cols=56  Identities=7%  Similarity=-0.051  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHhhccc-hhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692          384 ALFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ  440 (503)
Q Consensus       384 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~  440 (503)
                      .++...........+ .....+.|...+++..+-.++.....++ |.++++.+..++.
T Consensus       133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~  189 (472)
T TIGR00769       133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS  189 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            333344444444444 3445566667778899999999888888 8888888877776

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]

Probab=96.40  E-value=0.12  Score=47.15  Aligned_cols=123  Identities=13%  Similarity=0.034  Sum_probs=68.0

Q ss_pred             HHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh------hh------hHHHHHHHHHHH----HHhhhhhhhh
Q 010692           82 FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG------SS------FDFWSIAICRML----VGVGEASFIS  145 (503)
Q Consensus        82 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~------~~~~~l~~~r~l----~G~g~~~~~~  145 (503)
                      -.....+..++.|...|+..|+|++...+.+.-++.++++      +.      .++..+..+-++    ..++.=....
T Consensus        72 esgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A  151 (503)
T KOG2601|consen   72 ESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLA  151 (503)
T ss_pred             HHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence            3344556777788889999999998887776544444333      21      233333222222    2222222222


Q ss_pred             chhhhhhccC----CCCCchhHH---HHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Q 010692          146 LAAPFIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP  204 (503)
Q Consensus       146 ~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~  204 (503)
                      ....+-.||.    ..+.+....   +.....-..-..+.|+..|.+....+-|..-...++-+++
T Consensus       152 ~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  152 GTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             heEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence            2222334453    334444443   4444455556788999999998887777655555444444

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=96.37  E-value=0.045  Score=51.46  Aligned_cols=140  Identities=11%  Similarity=0.028  Sum_probs=83.8

Q ss_pred             HHHHHHhhhhhccccchhhhhcccc-hhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMS-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      +...++...-..+.|.|++.. |.+ .....+....-+.+++..++.|..+||...|..++|..+........+.+.+..
T Consensus        42 ~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig  120 (498)
T KOG0637|consen   42 AGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG  120 (498)
T ss_pred             HHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhh
Confidence            333444445567888888874 444 222233334445667778889999998766655555666555554444444333


Q ss_pred             Hhhh-----------------HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh-HHHHHHHHHhhcccccchhhH
Q 010692          375 CLSS-----------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       375 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      ....                 ....++.+.+.-+.......|.-++..+...++++.+ +++.+..+..+ |+.+|-.+.
T Consensus       121 ~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-GnvLGY~~g  199 (498)
T KOG0637|consen  121 YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GNVLGYALG  199 (498)
T ss_pred             hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cceeeeecc
Confidence            3211                 1122333334445555778889999999887765555 88887766666 777665444


Q ss_pred             H
Q 010692          437 G  437 (503)
Q Consensus       437 g  437 (503)
                      +
T Consensus       200 ~  200 (498)
T KOG0637|consen  200 S  200 (498)
T ss_pred             c
Confidence            3

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=96.24  E-value=0.0012  Score=60.68  Aligned_cols=55  Identities=18%  Similarity=0.061  Sum_probs=2.7

Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS  433 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  433 (503)
                      +.+..++..++.++..|-.....+....+.+++++|..+..+....... |-.+|.
T Consensus       247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs  301 (309)
T PF01733_consen  247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS  301 (309)
T ss_dssp             --------------------HHHH--------------------------------
T ss_pred             chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            4455566667777777766666677777888887777776666544444 555444

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=96.23  E-value=0.39  Score=46.14  Aligned_cols=64  Identities=14%  Similarity=-0.029  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhhhhcccchh-hHHHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692          289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATI  352 (503)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~  352 (503)
                      +.+....++..+..-...+-.|.++.+.+..+-. ...+...-.+..++.....|.+.||..|.+
T Consensus         5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~   69 (432)
T PF06963_consen    5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLK   69 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchh
Confidence            3445556666666666666667777776543421 123334445566667777788899988764

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=96.07  E-value=0.00092  Score=66.18  Aligned_cols=122  Identities=13%  Similarity=0.081  Sum_probs=0.4

Q ss_pred             hhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-------------
Q 010692          312 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-------------  377 (503)
Q Consensus       312 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  377 (503)
                      -++..++++.... .+.+..-++.++..++..++.+|-.|.     +++..+.++..+..++....+             
T Consensus        28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~  102 (539)
T PF03137_consen   28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN  102 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence            4566678876544 555666677777777777777764443     455444444443333322110             


Q ss_pred             ---------------------------------hHHHHHHHHHHHHHHHh----hccchhhHHhhcccCCCCchhHHHHH
Q 010692          378 ---------------------------------SLYGFLALFTVGELLVF----ATQAPVNYVCLHSVKPSLRALSMAIS  420 (503)
Q Consensus       378 ---------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~  420 (503)
                                                       ........+++..+..+    ..++...+++-|.++++..+...|+.
T Consensus       103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~  182 (539)
T PF03137_consen  103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL  182 (539)
T ss_dssp             -------------------------------------------------SSS----------------------------
T ss_pred             cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence                                             01112233333334444    44455566677778888888888887


Q ss_pred             HHHHhhcccccchhhHHHH
Q 010692          421 TVSIHIFGDVPSSPLVGVL  439 (503)
Q Consensus       421 ~~~~~~~g~~~~~~~~g~l  439 (503)
                      .....+ |-++|-.+++..
T Consensus       183 ~~~~~l-GPa~Gf~lg~~~  200 (539)
T PF03137_consen  183 YAMSIL-GPALGFLLGSFC  200 (539)
T ss_dssp             -------------------
T ss_pred             hHHhhc-cHHHHHHHHHHH
Confidence            654444 555554444544

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=95.93  E-value=0.19  Score=45.94  Aligned_cols=113  Identities=17%  Similarity=0.112  Sum_probs=67.6

Q ss_pred             HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhH
Q 010692          325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNY  402 (503)
Q Consensus       325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  402 (503)
                      .......+...++.++.|.+.||.|||     +.............+......  ..+.........+.+.+...+....
T Consensus        43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  117 (338)
T COG0477          43 LLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASA  117 (338)
T ss_pred             HHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            344455566666779999999999887     343333322122222222222  2344444444455666666677777


Q ss_pred             HhhcccCC-CCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692          403 VCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH  442 (503)
Q Consensus       403 ~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~  442 (503)
                      +..+..++ +.|+...+.........|..++|.+.+.+.+.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T COG0477         118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA  158 (338)
T ss_pred             HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888776 57888888876633333777777666666654

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.91  E-value=0.13  Score=49.48  Aligned_cols=103  Identities=14%  Similarity=0.193  Sum_probs=77.5

Q ss_pred             HHHHHHHHHhHHHHhh---hhcCCchhHHHHHHHHHHHHHHhhhh------------------hHHHHHHHHHHHHHhhh
Q 010692           82 FMVGLLVASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAICRMLVGVGE  140 (503)
Q Consensus        82 ~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~g~  140 (503)
                      ..++..++..+.+.+.   +++||++.+.++..+..++.++.-..                  +++...++.-++.|++-
T Consensus       288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D  367 (461)
T KOG3098|consen  288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD  367 (461)
T ss_pred             HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence            3344444455555555   56799999999999888887776442                  35677888999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV  185 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l  185 (503)
                      +......+.++.+.+ +++|..+.++...-..++..++.......
T Consensus       368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~  411 (461)
T KOG3098|consen  368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL  411 (461)
T ss_pred             HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            999999999999999 55688888888888888777666554443

>PRK03612 spermidine synthase; Provisional

Probab=95.64  E-value=0.45  Score=47.24  Aligned_cols=57  Identities=9%  Similarity=-0.083  Sum_probs=31.8

Q ss_pred             HHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-hhhh
Q 010692          387 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVNN  445 (503)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~g~  445 (503)
                      ++.+++.|+..|....+..+.. .+..+...|-.+....+ |+++|.++.+++.- ..|.
T Consensus       118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntl-Ga~~G~l~~~~vLlp~lG~  175 (521)
T PRK03612        118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYL-GALVGGLAFPFLLLPRLGL  175 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhH-HHHHHHHHHHHHHHHhcch
Confidence            3445556666555444443322 22345555666555555 88888888777643 5553

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=95.56  E-value=0.92  Score=44.46  Aligned_cols=56  Identities=11%  Similarity=0.025  Sum_probs=35.1

Q ss_pred             HHHHHHHHHhhccchhh-HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692          385 LFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD  441 (503)
Q Consensus       385 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~  441 (503)
                      +++..-.......+.+. ..+.+....++..+-.++.....++ |.++++.+..++.+
T Consensus       149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~  205 (491)
T PF03219_consen  149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            33333333333344333 3444555568899999999888888 77777766666665

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=94.49  E-value=0.13  Score=36.24  Aligned_cols=76  Identities=16%  Similarity=0.113  Sum_probs=52.2

Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL  379 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (503)
                      +-+.++..+|...++ .+++..+. .+.+...++..+|.+...++.++..++     +.+..+.+......+.....++.
T Consensus         7 gRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~   80 (85)
T PF06779_consen    7 GRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSF   80 (85)
T ss_pred             HHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhch
Confidence            344556677766555 67776554 677888899999999999888875555     66666666666666666655555


Q ss_pred             HHH
Q 010692          380 YGF  382 (503)
Q Consensus       380 ~~~  382 (503)
                      +.+
T Consensus        81 ~~w   83 (85)
T PF06779_consen   81 WLW   83 (85)
T ss_pred             HHH
Confidence            443

Note that many members are hypothetical proteins.

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=93.78  E-value=0.27  Score=46.76  Aligned_cols=84  Identities=14%  Similarity=0.034  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      ..+.+.+.+...+.++.=+....+..+.++++   .+.....+.+...++ |..+++.+.+++.++.| |...|.+.++.
T Consensus        34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~  111 (372)
T PF00854_consen   34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG  111 (372)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence            35566667777888888889999999988775   456677777888888 99889989999998877 87888888877


Q ss_pred             HHHHHHHHH
Q 010692          457 FFLAAGIWF  465 (503)
Q Consensus       457 ~~~~~~~~~  465 (503)
                      .+++.+.+.
T Consensus       112 ~~~~~~~f~  120 (372)
T PF00854_consen  112 MLLALIVFL  120 (372)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            776666554

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=93.62  E-value=0.82  Score=44.31  Aligned_cols=107  Identities=12%  Similarity=0.031  Sum_probs=72.7

Q ss_pred             hHHHHHHHHHHHHHhHHHHhhhhcCCc--hhHHHHH--HHHHHHHHHhh---------hhhHHHHHHHHHHHHHhhhhhh
Q 010692           77 VLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGL--SVWTFATAGCG---------SSFDFWSIAICRMLVGVGEASF  143 (503)
Q Consensus        77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~--~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~g~~~~  143 (503)
                      .....|.++-.+|..+..+.. .-++|  ++.+.+.  +++.-..++|.         +-++-+..++.-++.|+..|-.
T Consensus       311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~  389 (437)
T TIGR00939       311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL  389 (437)
T ss_pred             HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence            456677777777777554331 11333  3332221  12222223332         2246677778899999999999


Q ss_pred             hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692          144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV  184 (503)
Q Consensus       144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~  184 (503)
                      ...+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus       390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~  430 (437)
T TIGR00939       390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL  430 (437)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98899999999999999999999999999999998887643

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.43  E-value=0.49  Score=48.04  Aligned_cols=70  Identities=14%  Similarity=0.044  Sum_probs=39.0

Q ss_pred             hccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh------------------hhhHHHHHHHHHHH
Q 010692          395 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH------------------VNNWRKTTLALTSI  456 (503)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~------------------~g~~~~~~~~~~~~  456 (503)
                      ..++...+++-|.+.+++.+...|+.+.+.-+ |=++|-.+++.....                  .|.|-..|++.+.+
T Consensus       253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~l-GPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~  331 (735)
T KOG3626|consen  253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAIL-GPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGAL  331 (735)
T ss_pred             CCccCCCccccccccccCCcHHHHHHHHHHHh-hhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence            44445555666666667888888888644333 555444444444321                  14454555666665


Q ss_pred             HHHHHHHHH
Q 010692          457 FFLAAGIWF  465 (503)
Q Consensus       457 ~~~~~~~~~  465 (503)
                      .++.++.++
T Consensus       332 ~~~~a~p~f  340 (735)
T KOG3626|consen  332 LLFSAVPLF  340 (735)
T ss_pred             HHHHHHHHH
Confidence            555555444

>KOG3097 consensus Predicted membrane protein [Function unknown]

Probab=92.78  E-value=3.9  Score=37.18  Aligned_cols=74  Identities=7%  Similarity=0.125  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC
Q 010692           81 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA  155 (503)
Q Consensus        81 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~  155 (503)
                      ...+..+..+++.+.+..++|-|+++.++...+... +..-+=+.+..++-.-...|+|.+..+..--+|+++.-
T Consensus        66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g  139 (390)
T KOG3097|consen   66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG  139 (390)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence            344555667777779999999999999988877543 23334467888999999999999999988777777664

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=92.49  E-value=2.3  Score=37.39  Aligned_cols=136  Identities=14%  Similarity=0.030  Sum_probs=85.4

Q ss_pred             hhhHHHHHHHHHHHHHhHHHHhhhhcCCch--hHHHHHHHHHHHHHHhhhh----h---HHHHHHHHHHHHHhhhhhhhh
Q 010692           75 DGVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSS----F---DFWSIAICRMLVGVGEASFIS  145 (503)
Q Consensus        75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~g~~~~~~  145 (503)
                      .|.+.+.++++..+|+-+..++..|-..|-  .+.+..++.++...+..+.    +   +...=+++-.+.-.+.|.++|
T Consensus       284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP  363 (454)
T KOG4332|consen  284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP  363 (454)
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence            589999999999999999999888765543  4444444444443333221    1   122224455555567788999


Q ss_pred             chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692          146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF  210 (503)
Q Consensus       146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  210 (503)
                      ....+=+++.|++.|+..+.++..-.++=..++-..--.-....+-|..|-++.+...+..+...
T Consensus       364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~  428 (454)
T KOG4332|consen  364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQR  428 (454)
T ss_pred             HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHH
Confidence            99999999999999999888877655443222211100001123567788887776665554443

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=92.44  E-value=1.3  Score=41.75  Aligned_cols=35  Identities=9%  Similarity=-0.065  Sum_probs=18.9

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692          380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL  415 (503)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (503)
                      ...++..++.+.+.+...+..+.. ...+|++....
T Consensus       118 ~vt~~~vv~~~~a~a~~qgs~~G~-a~~~P~~ytqa  152 (406)
T KOG1479|consen  118 LVTLIIVVLLNLANAVVQGSLYGL-AGLFPSEYTQA  152 (406)
T ss_pred             HHHHHHHHHHhhhhhhhccchhhh-hhcCCHHHHHH
Confidence            344445555555555555555544 44567765443

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=91.58  E-value=1.5  Score=42.27  Aligned_cols=37  Identities=19%  Similarity=0.077  Sum_probs=20.4

Q ss_pred             hhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHH
Q 010692          400 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG  437 (503)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g  437 (503)
                      +-.+......+++++-|..-.....+. |.+++-.++-
T Consensus       139 VDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvFl  175 (544)
T PF13000_consen  139 VDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVFL  175 (544)
T ss_pred             eehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHHH
Confidence            444555566777777766554333344 6665544443

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=89.36  E-value=3.1  Score=38.72  Aligned_cols=63  Identities=13%  Similarity=-0.022  Sum_probs=31.9

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhh-----cccccc
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-----QMGATI  352 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~  352 (503)
                      +.+..+...+..++.-.... .-+|.+++. .+.+..+. .+....+ ... --++...++|     |+|||+
T Consensus        31 ~~illLl~LYllQGiP~GL~-~~iP~lL~a-k~vSyt~~a~fS~ay~-P~s-LKllWaPiVDs~y~k~~Grrk   99 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLI-GAIPLLLQA-KGVSYTSQAIFSFAYW-PFS-LKLLWAPIVDSVYSKRFGRRK   99 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHh-hhhHHHhcC-CCcchhhhhhhhhhhh-HHH-HHHHHHhhhHHHHHHhhcccc
Confidence            34444444455555444443 478888874 45553222 2221111 111 1356667777     999985

>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length

Probab=87.04  E-value=18  Score=30.94  Aligned_cols=119  Identities=9%  Similarity=0.062  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhHHHHhh---hhcCCchhHHHHHHHHHHHHHHhhh----hhH----HHHHHHHHHHHHhhhhhhhh--
Q 010692           79 SSAFMVGLLVASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGS----SFD----FWSIAICRMLVGVGEASFIS--  145 (503)
Q Consensus        79 ~s~~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~----~~~----~~~l~~~r~l~G~g~~~~~~--  145 (503)
                      .....+++.+|...++.+.   ++..+|+.....+.+-++..+..++    .++    +......-+.+|+=.+...-  
T Consensus        52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Qn~~~~~~~  131 (209)
T PF06912_consen   52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQNAAFRRLG  131 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3455556666666666662   3334444444444443333333322    233    44455555555543322210  


Q ss_pred             -----------ch---hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHH
Q 010692          146 -----------LA---APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG  197 (503)
Q Consensus       146 -----------~~---~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~  197 (503)
                                 ..   ..-+.|+...+++.+.-.......-++..+|..+++.+.+..+.+..+..
T Consensus       132 g~~~~Tt~~TG~l~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~~~  197 (209)
T PF06912_consen  132 GVSIRTTFMTGNLTDLGIDLARYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALLLP  197 (209)
T ss_pred             CCcccchhhHhhHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence                       11   11122433344443444455556666667777777777776675433333

The function of this family is unknown although a few members are thought to be membrane proteins.

>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]

Probab=85.72  E-value=2.8  Score=37.70  Aligned_cols=117  Identities=9%  Similarity=0.039  Sum_probs=78.7

Q ss_pred             ccccCCCc-cchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-----hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692           65 RGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-----LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV  138 (503)
Q Consensus        65 ~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-----~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~  138 (503)
                      .+.+..+. +|.-|....|.+|-.+..--.    .-+--+.     ++-.-.+++.+...+..+.+++|..++.-+.-|+
T Consensus       279 ~~g~sls~~sqYRwyqvlYQlGVFiSRSS~----~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGL  354 (409)
T KOG3880|consen  279 SHGFSLSKDSQYRWYQVLYQLGVFISRSSI----NLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGL  354 (409)
T ss_pred             ccCCccchhhcchhhheeeeeeEEEEeccc----eEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence            34455543 457788888877654432111    1111111     1222233444455566778999999999999998


Q ss_pred             hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692          139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV  185 (503)
Q Consensus       139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l  185 (503)
                      -+|..++...--+.+-.++++|-.+|+....+-++|..++..++-.+
T Consensus       355 lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl  401 (409)
T KOG3880|consen  355 LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL  401 (409)
T ss_pred             cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence            77778877777777777888999999999999999998887776443

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=82.77  E-value=45  Score=31.81  Aligned_cols=23  Identities=17%  Similarity=0.248  Sum_probs=14.8

Q ss_pred             HHHHHHHhhhhhHHHHHHHHHHH
Q 010692          276 SQDTKVLLQEKVYVVNVLGYIAY  298 (503)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~  298 (503)
                      .+..++.+++|..+...++....
T Consensus       235 ~~~~~~~~~nP~~~a~~lgli~~  257 (385)
T PF03547_consen  235 KKSILKLFKNPPLIAIILGLIIG  257 (385)
T ss_pred             HHHHHHHHhCcHHHHHHHHHHHH
Confidence            34456777888888776654443

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.51  E-value=6.8  Score=28.65  Aligned_cols=41  Identities=7%  Similarity=-0.052  Sum_probs=28.5

Q ss_pred             hhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHH
Q 010692           76 GVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFA  116 (503)
Q Consensus        76 g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~  116 (503)
                      +.-.+.-+++..+.....||+.||| |.++..++..++.+.+
T Consensus        45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~   86 (116)
T COG5336          45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG   86 (116)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence            4445666777777777889999998 7777666555554433

>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=80.57  E-value=0.29  Score=42.33  Aligned_cols=43  Identities=9%  Similarity=-0.030  Sum_probs=31.0

Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch
Q 010692          279 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN  321 (503)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (503)
                      +...|++-.+....+.+++.-...+....|++.|..+..+.+.
T Consensus       194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~q  236 (412)
T KOG4830|consen  194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQ  236 (412)
T ss_pred             chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHH
Confidence            4455677777777777777777777777888888877766664

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=80.50  E-value=8.5  Score=35.51  Aligned_cols=131  Identities=15%  Similarity=0.039  Sum_probs=90.3

Q ss_pred             hhHHHHHHHHHHHHHhHHHHhhhhcCCch--hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692           76 GVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD  153 (503)
Q Consensus        76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~  153 (503)
                      |..-++..+..+++.+..|++--++.|..  .+.++.+.-+...++++-++++|..+++-++.+.-.....+.+..-+++
T Consensus       274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~  353 (433)
T KOG3810|consen  274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR  353 (433)
T ss_pred             CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence            66778888899999999999987776653  4555555566666667778899998888888887777788888888888


Q ss_pred             cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-----------hHHHHHHHHHHHHHHHHHH
Q 010692          154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-----------WRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-----------wr~~f~~~~~~~~~~~~~~  209 (503)
                      ....+.-|..+|+....   +.++=.++.....+.-|           +..-|.+.+++.++.....
T Consensus       354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~  417 (433)
T KOG3810|consen  354 NLSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE  417 (433)
T ss_pred             hhhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence            88888788888877653   33344444433343111           2234556666555554443

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=80.17  E-value=11  Score=37.99  Aligned_cols=165  Identities=11%  Similarity=-0.038  Sum_probs=87.2

Q ss_pred             HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      .+-..+++++...+-.|+...++.....+ -.............+++++++|-+--|.    +.+.++.++......++.
T Consensus        47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt  122 (571)
T KOG1237|consen   47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT  122 (571)
T ss_pred             HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence            34444555555555566766666664332 2333444555666788999999754332    444444444333322221


Q ss_pred             Hhh----------------------hH---HHHHHHHHHHHHHHhhccchhhHHhhcccC---C-C--CchhHHHHHHHH
Q 010692          375 CLS----------------------SL---YGFLALFTVGELLVFATQAPVNYVCLHSVK---P-S--LRALSMAISTVS  423 (503)
Q Consensus       375 ~~~----------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~g~~~~~  423 (503)
                      ...                      +.   ..+...+.+...+.++.-+...+.-.+.++   + +  ....-+.+....
T Consensus       123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~  202 (571)
T KOG1237|consen  123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS  202 (571)
T ss_pred             HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence            110                      00   111222222333444556677777777777   3 2  222455555555


Q ss_pred             HhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010692          424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       424 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  466 (503)
                      .+. |..++-.+..++-+..+ |...|-+..++..++.++++.
T Consensus       203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~  243 (571)
T KOG1237|consen  203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP  243 (571)
T ss_pred             HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence            566 66666666666656554 777777776666666555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	503
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	6e-17
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
2cfq_A	417	Lactose permease; transport, transport mechanism,	5e-04
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	7e-04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 82.0 bits (203), Expect = 6e-17
 Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 39/418 (9%)

Query: 57  TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFA 116
             +   P   +   +    G   S   +    +  I  S++   NP   +  GL +    
Sbjct: 46  NFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 105

Query: 117 TAGCG----SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172
               G    ++     + +   L G  +          +       ++   +S++     
Sbjct: 106 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHN 165

Query: 173 TGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI--KPLQLKGFAPAESGKAQ 229
            G  +   ++   +    +W  A +  A   +  A+ AF +     Q  G  P E  K  
Sbjct: 166 VGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND 225

Query: 230 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 289
                +E +E               A +  ++ +  ++ L                    
Sbjct: 226 YPDDYNEKAEQ-----------ELTAKQIFMQYVLPNKLL-------------------W 255

Query: 290 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTI-VCGIVGTISGGFILDQM 348
              +  +    +      W P     + H +     +        GI GT+  G++ D++
Sbjct: 256 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV 315

Query: 349 GATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 408
                 A  +        A          +    +    V   L++     +    L   
Sbjct: 316 FRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA 375

Query: 409 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 466
                  +   + +  ++ G V +S +VG   D    W    + +     LA  +  V
Sbjct: 376 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIV 432

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 5e-05
 Identities = 45/340 (13%), Positives = 84/340 (24%), Gaps = 137/340 (40%)

Query: 1   MLSTSSNRSDDVVDVDQNSQPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSW 60
           +L T+  +   V D        L    +   SL H    L   E   +SL         +
Sbjct: 268 ILLTTRFKQ--VTDF-------LSAATTTHISLDHHSMTLTPDE--VKSLLL------KY 310

Query: 61  FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATA 118
              +  D                   L   P       + NP R  +I   +        
Sbjct: 311 LDCRPQD-------------------L---P---REVLTTNPRRLSIIAESIRDGL---- 341

Query: 119 GCGSSFDFWSIAICRMLVGVGEAS------------FISLAAPFIDDNAPVPQKTAWLSM 166
              +++D W    C  L  + E+S            F  L+  F   +A +P        
Sbjct: 342 ---ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-F-PPSAHIPTIL----- 391

Query: 167 FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 226
             + +                        W +    +  + +  V+  L        +  
Sbjct: 392 --LSL-----------------------IWFD----VIKSDVMVVVNKLHKYSLV-EKQP 421

Query: 227 KAQVVASVSEGSEASNLNDHVSEDISDQASERSI--KSIGESRFLNQLSQFSQDTKVLLQ 284
           K              ++   +  ++  +        +SI +    N    F  D  +   
Sbjct: 422 K----------ESTISIPS-IYLELKVKLENEYALHRSIVDHY--NIPKTFDSDDLIPPY 468

Query: 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM 324
                     Y         YS+ G       +H+ N + 
Sbjct: 469 LD-------QYF--------YSHIG-------HHLKNIEH 486

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 9/130 (6%)

Query: 104 RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT-- 161
             + +  ++ +    G   +     + I + L        +     +I     V      
Sbjct: 290 NALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATI 349

Query: 162 -AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220
                 F+  +   +    V  G +   + ++ A+    ++ L F +++       L G 
Sbjct: 350 YLVCFCFFKQL--AMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT----LSGP 403

Query: 221 APAESGKAQV 230
            P    + QV
Sbjct: 404 GPLSLLRRQV 413

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 4/154 (2%)

Query: 80  SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139
            A+++   V+   +  ++       +I VG+S++  AT    ++     +     + G+G
Sbjct: 42  GAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMG 101

Query: 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 199
                 +A     D     Q     S+  M I     L  + GG++ +  NWR  +    
Sbjct: 102 TGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYL--- 158

Query: 200 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 233
             +L             +    P ++ + +++ S
Sbjct: 159 -FLLVLCAGVTFSMARWMPETRPVDAPRTRLLTS 191

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	503
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.97
2xut_A	524	Proton/peptide symporter family protein; transport	99.97
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.51
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.5
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.42
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.33
2xut_A	524	Proton/peptide symporter family protein; transport	99.31
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.22
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.18

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=1.9e-40  Score=323.70  Aligned_cols=373  Identities=13%  Similarity=0.082  Sum_probs=289.0

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh----hhHHHHHHHHHH
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----SFDFWSIAICRM  134 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~l~~~r~  134 (503)
                      ..++.+.+++ .+..+.|++.+++.++..++++++|+++||+|||++++++.++.+++.+++++    ++|++.++++|+
T Consensus        49 ~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  127 (451)
T 1pw4_A           49 LAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF  127 (451)
T ss_dssp             HHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHH
T ss_pred             HHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHH
Confidence            3347778999 99999999999999999999999999999999999999999999999999999    999999999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhcc
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      ++|++.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..| ||+.|++.+++.++..++.++..
T Consensus       128 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~  207 (451)
T 1pw4_A          128 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM  207 (451)
T ss_dssp             HHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999888888 99999999998888887777777


Q ss_pred             ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692          214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      ||.++....++.++..      ++       ++  ++    .+++++++...       +  ....++++++|.++...+
T Consensus       208 ~~~~~~~~~~~~~~~~------~~-------~~--~~----~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~  259 (451)
T 1pw4_A          208 RDTPQSCGLPPIEEYK------ND-------YP--DD----YNEKAEQELTA-------K--QIFMQYVLPNKLLWYIAI  259 (451)
T ss_dssp             CCSSTTTCCCSCTTTC------CC--------------------------CC-------T--HHHHHHTSSCHHHHHHHH
T ss_pred             cCCHhhcCCCChhhhc------cc-------cc--cc----chhhhhccccc-------c--cchHHHHHcCHHHHHHHH
Confidence            7654332111111000      00       00  00    00000000000       0  012467788999999888


Q ss_pred             HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcc--cccchhhHHHHHHHHHHHH-HH
Q 010692          294 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM--GATISNAFKLLSAATFLGA-IS  369 (503)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~~~~~~-~~  369 (503)
                      ..++.......+..+.|.|+++.++.++... .+.....++.+++.++.+++.||+  ++|     +.+.....+.. +.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~~~  334 (451)
T 1pw4_A          260 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR-----GATGVFFMTLVTIA  334 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCH-----HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----hhHHHHHHHHHHHH
Confidence            8888888888899999999999888886544 455677788999999999999999  776     55544444433 33


Q ss_pred             HHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692          370 CLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR  447 (503)
Q Consensus       370 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~  447 (503)
                      .++....  .+.+......++.+++.+...+....+..+.+|++.|+++.|+.+...+.+|..++|.+.|++.|..| +.
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g-~~  413 (451)
T 1pw4_A          335 TIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WD  413 (451)
T ss_dssp             HHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-SH
T ss_pred             HHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cH
Confidence            3333222  24555555666666666667777778889999999999999999877776477889999999999877 77


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 010692          448 KTTLALTSIFFLAAGIWFV  466 (503)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~  466 (503)
                      ..+++.+++.+++.++...
T Consensus       414 ~~~~~~~~~~~~~~~~~~~  432 (451)
T 1pw4_A          414 GGFMVMIGGSILAVILLIV  432 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8888877777666655543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=2.3e-39  Score=314.85  Aligned_cols=344  Identities=17%  Similarity=0.213  Sum_probs=275.3

Q ss_pred             cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhhhHHHHHHHHHH
Q 010692           58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRM  134 (503)
Q Consensus        58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~  134 (503)
                      ...+|.+.+++|++..+.|++.+++.+++.++++++|+++||+|||++++++.++.+++.+++   +++++++.++++|+
T Consensus        46 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  125 (438)
T 3o7q_A           46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF  125 (438)
T ss_dssp             HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence            333477789999999999999999999999999999999999999999999999999999999   88899999999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-Ccch-----------------------
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLN-----------------------  190 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~g-----------------------  190 (503)
                      +.|++.+...+...+++.|++|+++|++++++.+.+.++|.++++.+++.+. +..+                       
T Consensus       126 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (438)
T 3o7q_A          126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLV  205 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred             HHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhh
Confidence            9999999999999999999999999999999999999999999999999988 5554                       


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHhcc-ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh
Q 010692          191 --WRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR  267 (503)
Q Consensus       191 --wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (503)
                        ||+.|++.+++.++..++.++.. ||..++.++++++                                         
T Consensus       206 ~~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------------------------------------  244 (438)
T 3o7q_A          206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQ-----------------------------------------  244 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCCSST-----------------------------------------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccc-----------------------------------------
Confidence              99999888877766666554432 3321110000000                                         


Q ss_pred             hhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccch-hhhhcccchhhH-HHHHhhhhhhhhchhhhhhhh
Q 010692          268 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKA-GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFIL  345 (503)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~  345 (503)
                           ++...++++++++|.++...+..++.......+..+.|.| +++.++.++... .+.....++.+++.++.+++.
T Consensus       245 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~  319 (438)
T 3o7q_A          245 -----GSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLI  319 (438)
T ss_dssp             -----TSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 0011456788899999999988888888888888999999 888878886544 555667788999999999999


Q ss_pred             hcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692          346 DQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH  425 (503)
Q Consensus       346 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  425 (503)
                      ||+++|     +.+..+.++..+..++....++.+. ....++.+++.+...+....+..+.+|++ ++.+.++.. ...
T Consensus       320 ~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~  391 (438)
T 3o7q_A          320 SRFAPH-----KVLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTI  391 (438)
T ss_dssp             HHSCHH-----HHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTT
T ss_pred             HHhcch-----HHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHH
Confidence            999988     6666666666555555555444443 33446666777777888888888888876 888888875 555


Q ss_pred             hcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692          426 IFGDVPSSPLVGVLQDHVNNWRKTTLALTSI  456 (503)
Q Consensus       426 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  456 (503)
                      + |..++|.+.|++.|..|++...+.+.+++
T Consensus       392 ~-g~~~~~~~~g~l~~~~g~~~~~~~~~~~~  421 (438)
T 3o7q_A          392 I-GGGIVTPVMGFVSDAAGNIPTAELIPALC  421 (438)
T ss_dssp             H-HHHHHHHHHHHHHHHHTSSGGGGHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            5 88889999999999887566677665444

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=100.00  E-value=7.4e-37  Score=301.60  Aligned_cols=423  Identities=13%  Similarity=0.075  Sum_probs=266.3

Q ss_pred             CCchhHHHHHHhhhcccCCCCCcccccccccccCC--------CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH
Q 010692           36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKL--------NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG  107 (503)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~  107 (503)
                      .++.++..++.++|.+..+...    +.++++++.        +..+.|++.+++.+|..++++++|+++||+|||++++
T Consensus        14 ~~~a~lg~~~~Gyd~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~   89 (491)
T 4gc0_A           14 TLVATLGGLLFGYDTAVISGTV----ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK   89 (491)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGTH----HHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            3344555666677665655554    444555532        3456789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhh------------------hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHh
Q 010692          108 VGLSVWTFATAGCG------------------SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM  169 (503)
Q Consensus       108 ~~~~~~~~~~~~~~------------------~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~  169 (503)
                      ++.+++.+++++++                  +++|+++++++|+++|+|.|...+....+++|+.|+++|++..++.+.
T Consensus        90 ~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~  169 (491)
T 4gc0_A           90 IAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQF  169 (491)
T ss_dssp             HHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhh
Confidence            99999999999998                  478999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHhhcC--------cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccC
Q 010692          170 CIPTGVALGYVYGGVVGS--------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS  241 (503)
Q Consensus       170 ~~~~G~~~g~~l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (503)
                      +..+|.++++.++..+..        ..+||+.+.+..+..++..+. .+..||+++....+++.++..+     ..   
T Consensus       170 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~peSp~~L~~~~~~~~a~~-----~l---  240 (491)
T 4gc0_A          170 AIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLML-LYTVPESPRWLMSRGKQEQAEG-----IL---  240 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHH-GGGSCCCHHHHHHTTCHHHHHH-----HH---
T ss_pred             hhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhh-hhcCCCChHHHHHcCchhHHHH-----hH---
Confidence            999999999998877643        246888888887776555444 4455776544222111111000     00   


Q ss_pred             CCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH-HHHHHHHHHHhhhhhccccchhhhhcccc
Q 010692          242 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMS  320 (503)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (503)
                             ++...+...++........ ....+. .......++.+..... ....+......+.+..+.|.+.+.....+
T Consensus       241 -------~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (491)
T 4gc0_A          241 -------RKIMGNTLATQAVQEIKHS-LDHGRK-TGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGAST  311 (491)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHH-HHHHHH-HTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCH
T ss_pred             -------HHhcCCchhHHHHHHHHHH-HHhhhh-hhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCc
Confidence                   0000000000000000000 000000 0111122333333333 33333444455566677777666544333


Q ss_pred             hhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH-h---hhHHHHHHHHHHHHHHHhhc
Q 010692          321 NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-L---SSLYGFLALFTVGELLVFAT  396 (503)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~  396 (503)
                      ........+..+..+++.++++++.||+|||     +.++.......+..+.... .   ...+..+...++...+.+..
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (491)
T 4gc0_A          312 DIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS  386 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSH-----HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhcCc-----chhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhH
Confidence            3333455666788889999999999999998     5554444433333222211 1   12223333333333344444


Q ss_pred             cc-hhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010692          397 QA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN-----NWRKTTLALTSIFFLAAGIWFVGIFL  470 (503)
Q Consensus       397 ~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (503)
                      .. ....+..|.+|++.|+++.|+.+...++ ++++++.+.+.+.+...     .....+++++++.+++.++..  .++
T Consensus       387 ~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~-~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~--~~~  463 (491)
T 4gc0_A          387 WGPVCWVLLSEIFPNAIRGKALAIAVAAQWL-ANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW--KFV  463 (491)
T ss_dssp             TTHHHHHHHHHSSCTTTHHHHHHHHHHHHHH-HHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--HHC
T ss_pred             HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH--hee
Confidence            44 3456777888889999999999888888 77778888777654321     122345565555554444332  255


Q ss_pred             c-ccccccccccccccccc
Q 010692          471 K-SIDKFNEDGENQISLDS  488 (503)
Q Consensus       471 ~-~~~~~~~~~~~~~~~~~  488 (503)
                      | +|+|+.||+|+..+++.
T Consensus       464 PETkg~tLeei~~~f~~~~  482 (491)
T 4gc0_A          464 PETKGKTLEELEALWEPET  482 (491)
T ss_dssp             CCCTTCCHHHHGGGTC---
T ss_pred             cCCCCCCHHHHHHHhCCCC
Confidence            6 49999999887765543

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=100.00  E-value=2.4e-36  Score=287.13  Aligned_cols=336  Identities=14%  Similarity=0.066  Sum_probs=266.2

Q ss_pred             ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692           61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE  140 (503)
Q Consensus        61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~  140 (503)
                      +|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++.++++|++.+++.|+++|++.
T Consensus        23 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~  102 (375)
T 2gfp_A           23 IADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGT  102 (375)
T ss_dssp             HHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            37778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692          141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF  220 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~  220 (503)
                      +...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..|||+.|++.+++.++..+...+..||+++..
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (375)
T 2gfp_A          103 GVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVD  182 (375)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTT
T ss_pred             HhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCC
Confidence            99999999999999999999999999999999999999999999999899999999998887776665555556533221


Q ss_pred             CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692          221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF  300 (503)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (503)
                      +++  ++.                                               .+++++++++|.++...+..++...
T Consensus       183 ~~~--~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  213 (375)
T 2gfp_A          183 APR--TRL-----------------------------------------------LTSYKTLFGNSGFNCYLLMLIGGLA  213 (375)
T ss_dssp             CCC--CCT-----------------------------------------------TTCSTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc--ccH-----------------------------------------------HHHHHHHhcCcchHHHHHHHHHHHH
Confidence            000  000                                               0223466788888888888888888


Q ss_pred             HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH-HHHHHHHHHHHH--h
Q 010692          301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT-FLGAISCLTAFC--L  376 (503)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~  376 (503)
                      ....+..+.|.|+++..+.++... .+.....++.+++.++.+++.||.+++     ....... ............  .
T Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  288 (375)
T 2gfp_A          214 GIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPDWFGV  288 (375)
T ss_dssp             HHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHHH-----HHHHHHHHHHTSSSSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhcc
Confidence            888899999999998777776444 445666777888888888888887662     2222222 111111111111  2


Q ss_pred             hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                      ++.+......++.+++.+...+....+..+..| ++|+++.|+.+...+. |..++|.+.|.+.+..+ +...+.+.
T Consensus       289 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~-~~~~~~~~  362 (375)
T 2gfp_A          289 MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQNI-GSGVLASLSAMLPQTGQ-GSLGLLMT  362 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHHHHH-HHHCCSTTCTHHHHHHH-HHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHHHHHH-HHHHHHHHHHHHhcCCc-ccHHHHHH
Confidence            344555566667777777888888889888887 8999999999988887 88889999999987644 65555543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=1.3e-34  Score=285.38  Aligned_cols=394  Identities=10%  Similarity=-0.013  Sum_probs=257.1

Q ss_pred             cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      +|+|.+..+.+++.+++.++..++++++|+++|| +|||+++..+.++.+++.+++++++|++.++++|+++|++.+...
T Consensus        47 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  126 (491)
T 4aps_A           47 GDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLK  126 (491)
T ss_dssp             TSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc
Confidence            3499999999999999999999999999999999 899999999999999999999999999999999999999999999


Q ss_pred             hchhhhhhccCCCCC--chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Q 010692          145 SLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP  222 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~  222 (503)
                      +...+++.|++|+++  |+.++++++.+.++|..++|.+++.+.+..|||+.|++.++..++..++.++..|+..++..+
T Consensus       127 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (491)
T 4aps_A          127 PNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYL  206 (491)
T ss_dssp             HHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCS
T ss_pred             chHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCccccccccc
Confidence            999999999999988  777888899999999999999999999988999999998887776666655554443322111


Q ss_pred             ccccccccccccccCccc----------------CCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhh
Q 010692          223 AESGKAQVVASVSEGSEA----------------SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK  286 (503)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (503)
                      +++.+.. .++..+..+.                .....+..+.. ...... .............++.........+..
T Consensus       207 ~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (491)
T 4aps_A          207 RPTDPLA-PEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYI-NLLTIV-AIAIPVFYFAWMISSVKVTSTEHLRVV  283 (491)
T ss_dssp             CCSCCCS-HHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHH-HHHHHH-HHHHHHHHHHHHC------------CT
T ss_pred             CCCCccc-cchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-hhhhHH-HHHHHHHHHHHHhhcccccHHHHHHHH
Confidence            1110000 0000000000                00000000000 000000 000000000000000000001111222


Q ss_pred             hHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-hhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692          287 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL  365 (503)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~  365 (503)
                      ..+...+..+...........++|.|.++..+.+. ..........+..+++.++.+++.||++||+......+..+..+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~  363 (491)
T 4aps_A          284 SYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMF  363 (491)
T ss_dssp             THHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence            33444444555555666667778888887666662 22344455667777888899999999998853322233333333


Q ss_pred             HHHHHHHHHHh---------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH
Q 010692          366 GAISCLTAFCL---------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       366 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      ..+..+.....         .+.+......++.+++.+...+....+..+..|++.|+++.|+.+...++ |..++|.+.
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~i~~~~~  442 (491)
T 4aps_A          364 AGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSV-GSALNAQLV  442 (491)
T ss_dssp             HHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHH-HHHHHHHHG
T ss_pred             HHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            33333322221         14455556666777777777888889999999999999999999888887 888899998


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          437 GVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       437 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +++.+..  +...+...+++.+++.++.+
T Consensus       443 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~  469 (491)
T 4aps_A          443 TLYNAKS--EVAYFSYFGLGSVVLGIVLV  469 (491)
T ss_dssp             GGGGGSS--TTHHHHHTHHHHHHHHHHHH
T ss_pred             HHHhccc--HHHHHHHHHHHHHHHHHHHH
Confidence            8887642  44566666655555444433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.97  E-value=6.2e-32  Score=259.87  Aligned_cols=351  Identities=13%  Similarity=0.030  Sum_probs=228.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH---HHhhhhhHHH-HHHHHHHHHHhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT---AGCGSSFDFW-SIAICRMLVGVGE  140 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~---~~~~~~~~~~-~l~~~r~l~G~g~  140 (503)
                      ++++|+++.+.|++.+.+.+++.++++++|+++||+|||++++++..+++++.   ....+++... .++..+++.|++.
T Consensus        35 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (417)
T 2cfq_A           35 HDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYL  114 (417)
T ss_dssp             HTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSST
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67799999999999999999999999999999999999999999888776532   2223333321 2445677777766


Q ss_pred             hhhhhchhhhhhccCCC--CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692          141 ASFISLAAPFIDDNAPV--PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK  218 (503)
Q Consensus       141 ~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~  218 (503)
                      +...+.....+.++.++  ++|+...+.......+|..++|.+++++.+ .+||+.|++.+++.++..+..++..||+++
T Consensus       115 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  193 (417)
T 2cfq_A          115 GFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPS  193 (417)
T ss_dssp             THHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCSC
T ss_pred             HHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            65555555555555443  346777888888899999999999999876 589999998877654444333322233111


Q ss_pred             CCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHH
Q 010692          219 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY  298 (503)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (503)
                      .   .++++.                ++  +         ++++           ...++.++++++|.++...+..+..
T Consensus       194 ~---~~~~~~----------------~~--~---------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~  232 (417)
T 2cfq_A          194 S---ATVANA----------------VG--A---------NHSA-----------FSLKLALELFRQPKLWFLSLYVIGV  232 (417)
T ss_dssp             S---SCSSSS----------------SS--S---------CCCC-----------CCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             c---cccccc----------------cc--c---------cccc-----------ccHHHHHHHhcCCchhhHHHHHHHH
Confidence            0   000000                00  0         0000           0013345677888887766654544


Q ss_pred             HHHhhhhhccccchhhhhcccc---hhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692          299 NFVIGAYSYWGPKAGYNIYHMS---NAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF  374 (503)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (503)
                      ...+..+..+.|.|+.+.++..   ... .....+..++.+++.++.+++.||+++|     +.+..+..+..+..+...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~l~~~~~~~~~~~~~~~  307 (417)
T 2cfq_A          233 SCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGK-----NALLLAGTIMSVRIIGSS  307 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-----HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHH-----HHHHHHHHHHHHHHHHHH
Confidence            4444555556777776654322   111 2333455567788899999999999988     665555544444333333


Q ss_pred             HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHH-HHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692          375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS-TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL  453 (503)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~  453 (503)
                      ..++.+..++..++.+++.....+....+..+..|++.||++.++. +...++ |++++|.+.|++.|..| +...|.+.
T Consensus       308 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~l-g~~~gp~l~G~l~~~~g-~~~~f~~~  385 (417)
T 2cfq_A          308 FATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQL-AMIFMSVLAGNMYESIG-FQGAYLVL  385 (417)
T ss_dssp             TCCSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHH-HHHHHTHHHHTHHHHSH-HHHHHHHH
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhH-HHHHhhhhHHHHHHhcC-cHHHHHHH
Confidence            3334444444444444444444455667888889999999999985 555566 88889999999999776 66777777


Q ss_pred             HHHHHHHHHHH
Q 010692          454 TSIFFLAAGIW  464 (503)
Q Consensus       454 ~~~~~~~~~~~  464 (503)
                      +++.+++.++.
T Consensus       386 ~~~~l~~~~~~  396 (417)
T 2cfq_A          386 GLVALGFTLIS  396 (417)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            76655555443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.97  E-value=1.2e-29  Score=252.00  Aligned_cols=151  Identities=14%  Similarity=0.112  Sum_probs=137.5

Q ss_pred             cccccC------CCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHH
Q 010692           64 KRGDFK------LNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRML  135 (503)
Q Consensus        64 i~~~~~------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l  135 (503)
                      +.+++|      .+..+.+++.+++.++..++++++|+++||+ |||+++.++.++.+++.+++++++ +++.++++|++
T Consensus        39 l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  118 (524)
T 2xut_A           39 LMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFL  118 (524)
T ss_dssp             HHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred             HHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence            367788      9999999999999999999999999999999 999999999999999999999999 99999999999


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHH---HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSM---FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI  212 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~---~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~  212 (503)
                      .|++.+...+...+++.|++|+++|+++.+.   .+.+.++|.+++|.+++.+.+..|||+.|++.+++.++..++.++.
T Consensus       119 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~  198 (524)
T 2xut_A          119 IALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLG  198 (524)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999876666   9999999999999999999888899999999988876665554443


Q ss_pred             cc
Q 010692          213 KP  214 (503)
Q Consensus       213 ~p  214 (503)
                      .|
T Consensus       199 ~~  200 (524)
T 2xut_A          199 RK  200 (524)
T ss_dssp             SS
T ss_pred             cc
Confidence            33

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.51  E-value=3.3e-14  Score=137.99  Aligned_cols=149  Identities=11%  Similarity=-0.039  Sum_probs=132.2

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc--CCchhHHHHHHHHH-HHHHHhhhh--hHHHHHHHHHHHHHhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIGVGLSVWT-FATAGCGSS--FDFWSIAICRMLVGVG  139 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~~~~~~~~-~~~~~~~~~--~~~~~l~~~r~l~G~g  139 (503)
                      ++.+|.+..+.+++.+...++..++.++.|++.||+  |||+.+..+..+.. ++.++..+.  .+.+.+.+..++.|++
T Consensus       280 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  359 (451)
T 1pw4_A          280 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFL  359 (451)
T ss_dssp             TTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence            344899999999999999999999999999999999  99999888887776 677776666  4788888888999999


Q ss_pred             hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhH-HHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      .+...+....++.|.+|+++|++++++.+....+ |..++|.+.+.+.+..||+..|++.+++.++..++.++..
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  434 (451)
T 1pw4_A          360 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  434 (451)
T ss_dssp             HTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888899999999999999999999999999 9999999999999999999999999988877776666553

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.50  E-value=2.9e-14  Score=136.68  Aligned_cols=145  Identities=8%  Similarity=0.010  Sum_probs=125.7

Q ss_pred             CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhh
Q 010692           71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF  150 (503)
Q Consensus        71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~  150 (503)
                      +..+.+++.++..++..++.++.|+++||+|||+++..+.++.+++.++.++.++.+.+++..++.+++.+...+....+
T Consensus       257 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  336 (417)
T 2cfq_A          257 GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKY  336 (417)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566888888888999999999999999999999999999988888888888888888888888888877777777899


Q ss_pred             hhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          151 IDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       151 i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +.|.+|++.|+.+.++ ++....+|..++|.+++.+.+..|++..|.+.+++.++..++.++..||
T Consensus       337 ~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~  402 (417)
T 2cfq_A          337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            9999999999999998 5888899999999999999888899999999988887777766665554

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.42  E-value=1.7e-12  Score=127.43  Aligned_cols=173  Identities=11%  Similarity=0.049  Sum_probs=138.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccccchhhhh-----cccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHH
Q 010692          286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-----YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL  358 (503)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~  358 (503)
                      +.++...+..++....++....+++.|+++.     ++.+.... .+.+...++..++.++.|+++|| +|||     +.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r-----~~   87 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGAR-----PA   87 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHH-----HH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-----HH
Confidence            4566666667777778888888899999887     88886555 55677888999999999999999 8998     77


Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCC--chhHHHHHHHHHhhcccccchhhH
Q 010692          359 LSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL--RALSMAISTVSIHIFGDVPSSPLV  436 (503)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~g~~~~~~~~  436 (503)
                      +..+.++..+..++....++.+..++..++.+++.+...+....++.+.+|+++  |+.+.++.+...++ |..++|.+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~  166 (491)
T 4aps_A           88 VFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINL-GAFIAPLIV  166 (491)
T ss_dssp             HHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHH-HHHHHHHHH
Confidence            777777776666666666777777777888888888888889999999999988  77788888777777 889999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692          437 GVLQDHVNNWRKTTLALTSIFFLAAGIWF  465 (503)
Q Consensus       437 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  465 (503)
                      +++.+..| |+..|++.++..+++.+...
T Consensus       167 ~~l~~~~g-~~~~f~~~~~~~~~~~~~~~  194 (491)
T 4aps_A          167 GAAQEAAG-YHVAFSLAAIGMFIGLLVYY  194 (491)
T ss_dssp             HHHHHHSC-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhh-HHHHHHHHHHHHHHHHHHHH
Confidence            99998876 88888887666555555443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.33  E-value=1.2e-11  Score=119.51  Aligned_cols=148  Identities=9%  Similarity=0.040  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH
Q 010692          290 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI  368 (503)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~  368 (503)
                      ...+..+.............|.+. +.++.+..+. .+.+...++..++.++.|++.||+|||     +.+..+.++..+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~l~~~~~~~~~  103 (438)
T 3o7q_A           30 LLCSLFFLWAVANNLNDILLPQFQ-QAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYAL  103 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHH-----HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----HHHHHHHHHHHH
Confidence            333444445555555666677654 4577776554 556778889999999999999999999     777766666666


Q ss_pred             HHHHH---HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH-hhhh
Q 010692          369 SCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ-DHVN  444 (503)
Q Consensus       369 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~-~~~g  444 (503)
                      ..++.   ...++.+.+++..++.+++.+...+....++.+..|+++|+.+.++.+....+ |.+++|.+.+.+. +..+
T Consensus       104 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~~  182 (438)
T 3o7q_A          104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF-GAIIAVVFGQSLILSNVP  182 (438)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHH-HHHHHHHHTTHHHHTSSC
T ss_pred             HHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccc
Confidence            65555   45567788888888888888888889999999999999999999999888887 9999999999988 5444

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.31  E-value=1.4e-11  Score=121.91  Aligned_cols=172  Identities=12%  Similarity=0.008  Sum_probs=131.5

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcc------cchhhH-HHHHhhhhhhhhchhhhhhhhhcc-cccchhhH
Q 010692          285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH------MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAF  356 (503)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~  356 (503)
                      ++.++...+..++....++....+++.|+++..+      .++... .+.+...++..++.++.|+++||+ |||     
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r-----   85 (524)
T 2xut_A           11 PRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKY-----   85 (524)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSH-----
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----
Confidence            3455666666777777777888888988888777      776544 555777888899999999999999 998     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH---HHHHHhhcccccc
Q 010692          357 KLLSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI---STVSIHIFGDVPS  432 (503)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~g~~~~  432 (503)
                      +.+..+.++..+..++....+ +.+.+++..++.+++.+...+....++.+.+|+++|+++.+.   .+...++ |.+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-g~~~g  164 (524)
T 2xut_A           86 NTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINF-GSFFA  164 (524)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHH-HHHHH
Confidence            676666666666665555556 677777777888888888888999999999999999876666   7766777 88889


Q ss_pred             hhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692          433 SPLVGVLQDHVNNWRKTTLALTSIFFLAAGI  463 (503)
Q Consensus       433 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  463 (503)
                      |.+.+++.+..| |+..|.+.+++.++..+.
T Consensus       165 ~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~  194 (524)
T 2xut_A          165 SLSMPLLLKNFG-AAVAFGIPGVLMFVATVF  194 (524)
T ss_dssp             HHTSTHHHHTSC-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccc-HHHHHHHHHHHHHHHHHH
Confidence            999999988766 888887776665544433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.22  E-value=2.8e-11  Score=114.26  Aligned_cols=162  Identities=14%  Similarity=0.070  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692          292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC  370 (503)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~  370 (503)
                      .+..++.......+....|.+.++ .+.++... ...+...++..++.++.|+++||+|||     +.+..+..+..+..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~   79 (375)
T 2gfp_A            6 VLLVAVGQMAQTIYIPAIADMARD-LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRR-----PVILVGMSIFMLAT   79 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT-SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCC-----CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHHHHHHHH
Confidence            333444555555556666766544 67665544 555777888999999999999999998     55555665555555


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHH
Q 010692          371 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT  450 (503)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~  450 (503)
                      +.....++.+..+...++.+.+.+...+....++.+..|+++|+++.++.+..... |..++|.+.+++.+..+ |+..+
T Consensus        80 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~  157 (375)
T 2gfp_A           80 LVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILV-SPLLAPLIGGLLDTMWN-WRACY  157 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHH-HHHHHHHHHHHSSCHHH-HHHHH
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHHhcc-HHHHH
Confidence            55555677777777778888888888888889999999999999999999888777 99999999999988766 77777


Q ss_pred             HHHHHHHHHHH
Q 010692          451 LALTSIFFLAA  461 (503)
Q Consensus       451 ~~~~~~~~~~~  461 (503)
                      .+.++..++..
T Consensus       158 ~~~~~~~~~~~  168 (375)
T 2gfp_A          158 LFLLVLCAGVT  168 (375)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            76665544433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.18  E-value=7.4e-11  Score=115.68  Aligned_cols=156  Identities=8%  Similarity=-0.019  Sum_probs=118.0

Q ss_pred             cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-----HHHHHHH-HHHH
Q 010692           62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAI-CRML  135 (503)
Q Consensus        62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~-~r~l  135 (503)
                      +.+.++.+.+..+.........+...++.++.+++.||+|||+.++.+....+++.+..+...     +...+.. .-+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  380 (491)
T 4gc0_A          301 PEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV  380 (491)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred             hHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence            445666777777777777888889999999999999999999999999888888777655431     2222222 2222


Q ss_pred             HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC------cchhHHHHHHHHHHHHHHHHHH
Q 010692          136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS------HLNWRYAFWGEAILMLPFAVLA  209 (503)
Q Consensus       136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------~~gwr~~f~~~~~~~~~~~~~~  209 (503)
                      .+.+. ...+....+.+|.+|.+.|++++++......+|..+++.+.+.+.+      ..++.+.|++.++++++..+..
T Consensus       381 ~~~~~-~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~  459 (491)
T 4gc0_A          381 AAFAM-SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFM  459 (491)
T ss_dssp             HHHHT-TTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHh-HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence            22222 2446677899999999999999999999999999998888766643      2355678889999999999888


Q ss_pred             HhccccccC
Q 010692          210 FVIKPLQLK  218 (503)
Q Consensus       210 ~~~~p~~~~  218 (503)
                      ++++||+..
T Consensus       460 ~~~~PETkg  468 (491)
T 4gc0_A          460 WKFVPETKG  468 (491)
T ss_dssp             HHHCCCCTT
T ss_pred             HheecCCCC
Confidence            888998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	503
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	1e-04

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 42.1 bits (97), Expect = 1e-04
 Identities = 18/172 (10%), Positives = 49/172 (28%), Gaps = 5/172 (2%)

Query: 60  WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119
           +FT      +      G +++   +           +         + +  ++ +    G
Sbjct: 246 FFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIG 305

Query: 120 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALG 178
              +     + I + L        +     +I     V        + +       +   
Sbjct: 306 SSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFM 365

Query: 179 YVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 230
            V  G +   + ++ A+    ++ L F +++       L G  P    + QV
Sbjct: 366 SVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT----LSGPGPLSLLRRQV 413

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	503
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.96
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.55
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.37

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-40  Score=321.70  Aligned_cols=376  Identities=13%  Similarity=0.076  Sum_probs=277.8

Q ss_pred             ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh----HHHHHHHHHH
Q 010692           59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRM  134 (503)
Q Consensus        59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~  134 (503)
                      ...|.+ +|+|+|.+|+|++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++++++    +++.+++.|+
T Consensus        46 ~~~p~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (447)
T d1pw4a_          46 LAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF  124 (447)
T ss_dssp             HHHHHT-TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHH
T ss_pred             HHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHH
Confidence            333444 46899999999999999999999999999999999999999999999999999988764    6788999999


Q ss_pred             HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhcc
Q 010692          135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIK  213 (503)
Q Consensus       135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~  213 (503)
                      +.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+... .+||+.|++.+++.++..++.+++.
T Consensus       125 ~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~  204 (447)
T d1pw4a_         125 LCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM  204 (447)
T ss_dssp             HHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999998876654 4799999999999888888887777


Q ss_pred             ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692          214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL  293 (503)
Q Consensus       214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (503)
                      ++.++....++.++..                   ++..++..+..+++         ........+..++++.++....
T Consensus       205 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  256 (447)
T d1pw4a_         205 RDTPQSCGLPPIEEYK-------------------NDYPDDYNEKAEQE---------LTAKQIFMQYVLPNKLLWYIAI  256 (447)
T ss_dssp             CCSSTTTCCCSCTTTC-------------------CC----------------------CCTHHHHHHTSSCHHHHHHHH
T ss_pred             ccchhhcccchhhhhh-------------------hhcccchhhccccc---------cchhhHHHHHHHcCchHHHHHH
Confidence            6644332111111100                   00000000000000         0001134567788899998888


Q ss_pred             HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692          294 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT  372 (503)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (503)
                      ..++.....+....+.|.|+.+..+.+.... ....+..+..+++.++.|++.||++++.......+  ...+.......
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  334 (447)
T d1pw4a_         257 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVF--FMTLVTIATIV  334 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH--HHHHHHHHHHH
T ss_pred             Hhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccch--hHHHHHHHHHH
Confidence            8888888888899999999999888886554 55567778889999999999999998753211111  11111111111


Q ss_pred             HH--HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHH
Q 010692          373 AF--CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT  450 (503)
Q Consensus       373 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~  450 (503)
                      ..  ...+.+......++.+++.....+.......+.+|++.||++.|+.+...+..|.+++|.+.|++.|..| +...+
T Consensus       335 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g-~~~~~  413 (447)
T d1pw4a_         335 YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGF  413 (447)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-SHHHH
T ss_pred             HHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHH
Confidence            11  1234455555666666666666677778888999999999999999888887567778999999999987 66777


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010692          451 LALTSIFFLAAGIWFV  466 (503)
Q Consensus       451 ~~~~~~~~~~~~~~~~  466 (503)
                      ++.+++.+++.++...
T Consensus       414 ~~~~~~~~~~~~~~~~  429 (447)
T d1pw4a_         414 MVMIGGSILAVILLIV  429 (447)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7766666555554443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8e-30  Score=242.88  Aligned_cols=353  Identities=13%  Similarity=0.011  Sum_probs=236.7

Q ss_pred             cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHH----HHHHHHHHhh
Q 010692           64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSI----AICRMLVGVG  139 (503)
Q Consensus        64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l----~~~r~l~G~g  139 (503)
                      +++++|+|++++|++.+++.++..++++++|+++||+|||++++++..+..++..+..+..+....    ++.+.+.+.+
T Consensus        34 l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (417)
T d1pv7a_          34 LHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIY  113 (417)
T ss_dssp             HHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTT
T ss_pred             HHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc
Confidence            477899999999999999999999999999999999999999999999999999888887665544    4455555555


Q ss_pred             hhhhhhchhhhhhccCCC--CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692          140 EASFISLAAPFIDDNAPV--PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL  217 (503)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~  217 (503)
                      .+...........+..++  +++.+..+........+..+++.+++.+.+. +|+..+........+..++.++..|+.+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (417)
T d1pv7a_         114 LGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAP  192 (417)
T ss_dssp             GGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcccc
Confidence            555554444444444332  2455677888888999999999999988765 5666666666666666666666665543


Q ss_pred             CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692          218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA  297 (503)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (503)
                      ...+++++.+...                              +.           .........++++..+........
T Consensus       193 ~~~~~~~~~~~~~------------------------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  231 (417)
T d1pv7a_         193 SSATVANAVGANH------------------------------SA-----------FSLKLALELFRQPKLWFLSLYVIG  231 (417)
T ss_dssp             SSSCSSHHHHSCC------------------------------CC-----------CCHHHHHHHTTSSHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhc------------------------------cc-----------ccccccccccccccccchhhhhHH
Confidence            3322111111000                              00           000112222233333322222222


Q ss_pred             HHHHhhhhh----ccccchhhhhcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692          298 YNFVIGAYS----YWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT  372 (503)
Q Consensus       298 ~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (503)
                      .........    .+.+.+..+ .+.+... ........++..++..+.+++.||.+++     +.+..+..+..+..+.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~~  305 (417)
T d1pv7a_         232 VSCTYDVFDQQFANFFTSFFAT-GEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGK-----NALLLAGTIMSVRIIG  305 (417)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHH-----HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhccccccccccccc-cccchhhhcccccccccccccchhhhhhhhcccccc-----cchhhhHHHHHHhhhc
Confidence            222211111    222222222 2222222 2344556677888899999999999988     7777777766666666


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHH
Q 010692          373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA  452 (503)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~  452 (503)
                      ....++.+..++..++.+++.+...+....+..+.+|++.|+++.|+.....+.+|..++|.+.|++.|..| ++..+++
T Consensus       306 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g-~~~~~~~  384 (417)
T d1pv7a_         306 SSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG-FQGAYLV  384 (417)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC-HHHHHHH
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHH
Confidence            666677777777888888888888888999999999999999999986544443388889999999999987 7778877


Q ss_pred             HHHHHHHHHHHHH
Q 010692          453 LTSIFFLAAGIWF  465 (503)
Q Consensus       453 ~~~~~~~~~~~~~  465 (503)
                      .+++.++..++..
T Consensus       385 ~~~~~~~~~~~~~  397 (417)
T d1pv7a_         385 LGLVALGFTLISV  397 (417)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7776665555444

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=1.7e-15  Score=142.64  Aligned_cols=151  Identities=7%  Similarity=-0.026  Sum_probs=137.0

Q ss_pred             ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692           65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI  144 (503)
Q Consensus        65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~  144 (503)
                      .++.+.+....+...+...++..++..+.+++.||+|+|+.+.++.++.+++.++.++.++.+.+++..++.|++.+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  330 (417)
T d1pv7a_         251 FATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLL  330 (417)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHH
Confidence            34455566778888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hchhhhhhccCCCCCchhHHHHH-HhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692          145 SLAAPFIDDNAPVPQKTAWLSMF-YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL  215 (503)
Q Consensus       145 ~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~  215 (503)
                      +...+++.|.+|+++|+++.++. +....+|..++|.++|++.+.+||+..|++.+++.++..++.++..++
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~  402 (417)
T d1pv7a_         331 VGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             HHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999975 567789999999999999999999999999999988888877777643

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.8e-12  Score=121.78  Aligned_cols=155  Identities=15%  Similarity=0.063  Sum_probs=113.8

Q ss_pred             hhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----h
Q 010692          303 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----S  377 (503)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  377 (503)
                      ..+....| ++++ .|.+..+. .+.+...++..++.++.|+++||+|||     +.+..+.++..+..++....    .
T Consensus        42 ~~~~~~~p-~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~  114 (447)
T d1pw4a_          42 KNFALAMP-YLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLILAAAVMLFMGFVPWATS  114 (447)
T ss_dssp             TSHHHHHH-HTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHH-----HHHHHHHHHHHHHHHHHHHCHHHHS
T ss_pred             HHHHHHHH-HHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHhhccccchhhh
Confidence            34444455 4444 57776555 556788889999999999999999998     67666666555554443332    3


Q ss_pred             hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692          378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF  457 (503)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~  457 (503)
                      +.+..++.-++.+++.+...+....++.+.+|+++|+++.|+.+....+ |.+++|.+.+.+.+..++|+..+++.+.+.
T Consensus       115 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~  193 (447)
T d1pw4a_         115 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV-GGGIPPLLFLLGMAWFNDWHAALYMPAFCA  193 (447)
T ss_dssp             SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHH-HHTSHHHHHHHHHHHTCCSTTCTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccch-hhhhhhhhhhhHhhhhhcccccchhhhhhH
Confidence            4456666677777887888888899999999999999999999887777 888899888888887766777777766665


Q ss_pred             HHHHHHHH
Q 010692          458 FLAAGIWF  465 (503)
Q Consensus       458 ~~~~~~~~  465 (503)
                      ++..++.+
T Consensus       194 ~~~~~~~~  201 (447)
T d1pw4a_         194 ILVALFAF  201 (447)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55444443