Citrus Sinensis ID: 010780


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-
MSSPSKDQENPLRDHMVKNSHTNSWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIHRQHSRNKVLVPTHVPSSDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEIAGL
ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccEEcHHHHHHHHccccccccEEEEEccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccEEccccccEEEEEEEcccccEEEEEEccEEEEEEcccccccccccHHHHHcccccccccccccccccccccccccccEEEEEEccEEcccccEEEEEEEEEcccccccccccccccccEEEEEEccccccccccccccccccccccccccEEEEEEEEEcccccccc
cccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEccccEEccHHHHHHHHHcccccEEEEEcccccHHHHEEEccccccccHHHHEcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccEEEccccHHHHHHccccccEEEEccHcccccccccccHHHHHHHHHHHHccccHHHHHEEEEEccccEEEEEEEEEEEEEEEcccccHHHHccHHHHHHHHHcccccccccccccccccccccccEEEEEEcEEEcccccEEEEEEEEccccccccccccccHHHccEEEEEccccccHHccccccHccEEEEcccccEEEEEEEEcccccEEEc
msspskdqenplrdhmvknshtnswslpkTMICFIVLVSLPYVFYSLILLyssdtpnhepvirihrqhsrnkvlvpthvpssddtedktslKHVVFgigassstWEHRRNYIRtwwrpnvtrghvwldkpvknssidhllppikvsgdtskfqyknpigtrdaIRISRIVSESFRLGLKdvrwfvmgdddtvFFLDNLARVLskydhneyyyigypseshlQNLAFYygmgfgggGFAISYALAKALEKIQDeclhrnpslygsdeRIFACMMElgvpltkhpgfhqldiygdlsgilmahpvapilslhhldliepvfpkmDRVKAVKRLMVPmkldsagliqqsicycktrswtvsvsWGYAVQIYRGIIAAkemsvpartfidwnfgdedvyfsfntrpvstnpcqkpFVYYLSNALFNLNLNRTASEYirhqesnsdcdwkiadpsrikrievykkpdphlwdkpprrnccrilptkkkgtmvVDVGVcregeiagl
msspskdqenplrdhMVKNshtnswslpKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRihrqhsrnkvlvpthvpssddtedktsLKHVVfgigassstwehRRNYIRtwwrpnvtrgHVWLDKpvknssidhllppikvsgdtskfqyknpigtrdairisrIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIrhqesnsdcdwkiadpsrIKRIevykkpdphlwdkpprrnccrilptkkkgtmvvdVGVCREGEIAGL
MSSPSKDQENPLRDHMVKNSHTNSWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIHRQHSRNKVLVPTHVPSSDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAfyygmgfggggfAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEIAGL
***********************SWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIH*************************LKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCRE******
*************************SLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPV*****************************LKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVK****DHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRP*****CQKPFVYYLSNAL***********YIRHQESNS*CDWKIADPS*I***************KPPRRNCCRILPTKKKGTMVVDVGVCREG**AG*
***********LRDHMVKNSHTNSWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIHRQHSRNKVLVPT***********TSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEIAGL
*********NPLRDH*V**SHTNSWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIHRQH*******************KTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEIAGL
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSPSKDQENPLRDHMVKNSHTNSWSLPKTMICFIVLVSLPYVFYSLILLYSSDTPNHEPVIRIHRQHSRNKVLVPTHVPSSDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEIAGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query501 2.2.26 [Sep-21-2011]
Q9NS00363 Glycoprotein-N-acetylgala yes no 0.253 0.349 0.282 0.0001
Q0VC84368 Glycoprotein-N-acetylgala yes no 0.147 0.201 0.370 0.0002
P79948375 Beta-1,3-N-acetylglucosam N/A no 0.125 0.168 0.350 0.0004
>sp|Q9NS00|C1GLT_HUMAN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens GN=C1GALT1 PE=1 SV=1 Back     alignment and function desciption
 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 25/152 (16%)

Query: 163 AIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQ 222
            I+  + V E +   L+D  WF+  DDDT   LDNL  +LSKYD  E  Y G   + +++
Sbjct: 147 TIKAFQYVHEHY---LEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVK 203

Query: 223 NLAFYYGMGFGGGGFAIS-YALAKALEKIQ-DECLHRNPSLYGSDERIFACMMELGVPLT 280
                 G   GG G+ +S  AL + ++  + D+C H +      D  +  CM  + V   
Sbjct: 204 Q-----GYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSI---EDLALGRCMEIMNVEA- 254

Query: 281 KHPGFHQLDIYGDLSGILMAHPVAPILSLHHL 312
                      GD    +      P +  HHL
Sbjct: 255 -----------GDSRDTIGKETFHPFVPEHHL 275




Glycosyltransferase that generates the core 1 O-glycan Gal-beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins. Plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2EC: 2
>sp|Q0VC84|C1GLT_BOVIN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Bos taurus GN=C1GALT1 PE=2 SV=1 Back     alignment and function description
>sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Xenopus laevis GN=lfng PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query501
356560751492 PREDICTED: uncharacterized protein LOC10 0.944 0.961 0.592 1e-172
356530054 810 PREDICTED: uncharacterized protein LOC10 0.976 0.603 0.574 1e-169
255541672518 transferase, transferring glycosyl group 0.982 0.949 0.568 1e-167
225426178527 PREDICTED: uncharacterized protein LOC10 0.992 0.943 0.540 1e-167
224075006517 predicted protein [Populus trichocarpa] 0.984 0.953 0.566 1e-167
297742225490 unnamed protein product [Vitis vinifera] 0.960 0.981 0.556 1e-166
356511472529 PREDICTED: uncharacterized protein LOC10 0.918 0.869 0.564 1e-165
84453206515 hypothetical protein [Trifolium pratense 0.952 0.926 0.569 1e-165
224053863518 predicted protein [Populus trichocarpa] 0.986 0.953 0.554 1e-165
356528655503 PREDICTED: uncharacterized protein LOC10 0.920 0.916 0.570 1e-162
>gi|356560751|ref|XP_003548651.1| PREDICTED: uncharacterized protein LOC100790149 [Glycine max] Back     alignment and taxonomy information
 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/483 (59%), Positives = 362/483 (74%), Gaps = 10/483 (2%)

Query: 23  NSWSLPKTMICFIVLVSLPYVFYSLILL---YSSDTPNHEPVIRIHRQHSRNKVLVPTHV 79
           +SWS  K M  F +L+S+ Y+FYSL  +   Y  D   H P I  H   +      P+  
Sbjct: 16  SSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQTPHNPTITHHISFN-----TPSEE 70

Query: 80  PSSDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDH- 138
            S+   E+ T++ H+VFGIGAS+  W+ R+ YI+ WWRPN  RG VWL++ VK  + +  
Sbjct: 71  ESTPPFEELTNISHIVFGIGASAKLWKQRKEYIKLWWRPNEMRGVVWLEQKVKTEAQNED 130

Query: 139 LLPPIKVSGDTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNL 198
            LPP+++S DTS+F+YKN  G R AIRISRIVSE+ RLG++ VRWFVMGDDDTVF  +NL
Sbjct: 131 FLPPLRISSDTSRFKYKNQKGHRSAIRISRIVSETLRLGMEGVRWFVMGDDDTVFVAENL 190

Query: 199 ARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRN 258
            +VL KYDHN++YYIG  SESHLQN+ F Y M +GGGGFAISY LA ALEK+QD C+ R 
Sbjct: 191 VKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRY 250

Query: 259 PSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPV 318
           P LYGSD+RI ACM ELGVPLTK  GFHQ D+YG+L G+L AHPV P++SLHHLD++EP+
Sbjct: 251 PGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPI 310

Query: 319 FPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMS 378
           FP M RV+A+KRL  PMKLD AGLIQQSICY K R+WT+SVSWGYAVQI+RGI +A+EM 
Sbjct: 311 FPNMSRVQALKRLNRPMKLDPAGLIQQSICYDKARTWTISVSWGYAVQIFRGIFSAREME 370

Query: 379 VPARTFIDWNFGDEDVYFSFNTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQES 438
           +PARTF++W    +   + FNTRPVS + CQKPFVYYLS A+++   N TAS+Y+R Q+ 
Sbjct: 371 MPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYYLSRAVYDEGANETASQYVRVQQ- 429

Query: 439 NSDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEI 498
           N +C+WK+ DP++IK + VYKKPDPHLWDK PRRNCCR+  TKK+GTMV+DVG C+E E+
Sbjct: 430 NPECNWKMEDPTQIKVVHVYKKPDPHLWDKAPRRNCCRVRRTKKQGTMVIDVGECKEDEL 489

Query: 499 AGL 501
             L
Sbjct: 490 VEL 492




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530054|ref|XP_003533599.1| PREDICTED: uncharacterized protein LOC100777888 [Glycine max] Back     alignment and taxonomy information
>gi|255541672|ref|XP_002511900.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223549080|gb|EEF50569.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225426178|ref|XP_002279187.1| PREDICTED: uncharacterized protein LOC100267372 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075006|ref|XP_002304515.1| predicted protein [Populus trichocarpa] gi|222841947|gb|EEE79494.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742225|emb|CBI34374.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356511472|ref|XP_003524450.1| PREDICTED: uncharacterized protein LOC100818244 [Glycine max] Back     alignment and taxonomy information
>gi|84453206|dbj|BAE71200.1| hypothetical protein [Trifolium pratense] Back     alignment and taxonomy information
>gi|224053863|ref|XP_002298017.1| predicted protein [Populus trichocarpa] gi|118487420|gb|ABK95538.1| unknown [Populus trichocarpa] gi|222845275|gb|EEE82822.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356528655|ref|XP_003532915.1| PREDICTED: uncharacterized protein LOC100795943 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query501
TAIR|locus:2177896524 AT5G41460 [Arabidopsis thalian 0.904 0.864 0.549 1.8e-142
TAIR|locus:2117949526 AT4G23490 [Arabidopsis thalian 0.934 0.889 0.548 1.3e-141
TAIR|locus:2025416478 AT1G01570 [Arabidopsis thalian 0.904 0.947 0.552 1.5e-138
TAIR|locus:2128283507 AT4G11350 [Arabidopsis thalian 0.986 0.974 0.504 1.1e-135
TAIR|locus:2026514541 AT1G07850 [Arabidopsis thalian 0.848 0.785 0.518 1.5e-124
TAIR|locus:2126076 785 AT4G00300 [Arabidopsis thalian 0.904 0.577 0.508 1.7e-121
TAIR|locus:2040711532 AT2G37730 [Arabidopsis thalian 0.940 0.885 0.417 3.3e-102
TAIR|locus:2196673548 AT1G33250 [Arabidopsis thalian 0.860 0.786 0.397 1.8e-85
TAIR|locus:2080797505 AT3G11420 [Arabidopsis thalian 0.802 0.796 0.416 8e-85
TAIR|locus:2129845488 AT4G15240 [Arabidopsis thalian 0.810 0.831 0.415 1.7e-82
TAIR|locus:2177896 AT5G41460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1353 (481.3 bits), Expect = 1.8e-142, Sum P(2) = 1.8e-142
 Identities = 252/459 (54%), Positives = 327/459 (71%)

Query:    45 YSLILLYSSDTPNH-EPVIRIHRQHSR--NKVLVPTHVPSSDDTEDKTSLKHVVFGIGAS 101
             +S ++   +D  N  +P+I  H   +        P   P       +T  +HVVFGI AS
Sbjct:    63 FSAVVRRLNDIVNSSQPLILFHTNQTAVIKSYASPPPSPPPPPPPPQTGFQHVVFGIAAS 122

Query:   102 SSTWEHRRNYIRTWWRPNVTRGHVWLDKPV-KNSSIDHL-LPPIKVSGDTSKFQYKNPIG 159
             +  W+ R+ YI+ W++PN  R +VWL+KPV +    D + LPP+K+SGDTSKF YKN  G
Sbjct:   123 ARLWKQRKEYIKIWYKPNQMRSYVWLEKPVTEEDEEDEISLPPVKISGDTSKFPYKNKQG 182

Query:   160 TRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSES 219
              R AIRISRIV+E+ +LGLKDVRWFVMGDDDTVF  +NL RVL KYDHN+ YYIG  SES
Sbjct:   183 HRSAIRISRIVTETLKLGLKDVRWFVMGDDDTVFVAENLIRVLRKYDHNQMYYIGSLSES 242

Query:   220 HLQNLAXXXXXXXXXXXXAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPL 279
             HLQN+             AISY LA AL K+QD C+ R P+LYGSD+R+ ACM ELGVPL
Sbjct:   243 HLQNIYFSYGMAYGGGGFAISYPLAVALSKMQDRCIKRYPALYGSDDRMQACMAELGVPL 302

Query:   280 TKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDS 339
             TK  GFHQ D+YG+L G+L AHPVAP+++LHHLD++EP+FP M RV A+K L VP KLDS
Sbjct:   303 TKELGFHQYDVYGNLFGLLAAHPVAPLVTLHHLDVVEPIFPNMTRVDALKHLQVPAKLDS 362

Query:   340 AGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFN 399
             AGL+QQSICY K R WTVSVSWG+AVQI+RGI +A+E+ +P+RTF++W    +   ++FN
Sbjct:   363 AGLMQQSICYDKRRKWTVSVSWGFAVQIFRGIFSAREIEMPSRTFLNWYRRADYTAYAFN 422

Query:   400 TRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNSDCDWKIADPSRIKRIEVYK 459
             TRPVS +PCQKPFV+Y+++   +   N T S Y  H+ ++ +C WK+A+PS IK + VYK
Sbjct:   423 TRPVSRHPCQKPFVFYMTSTRVHRVTNMTVSRYEIHRVAHPECRWKMANPSDIKTVIVYK 482

Query:   460 KPDPHLWDKPPRRNCCRILPTKKKGTMVVDVGVCREGEI 498
             KPDPHLWD+ PRRNCCR+  +KK  T+ + V VC+EGE+
Sbjct:   483 KPDPHLWDRSPRRNCCRV-KSKKNNTLEISVAVCKEGEV 520


GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
TAIR|locus:2117949 AT4G23490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025416 AT1G01570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128283 AT4G11350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026514 AT1G07850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126076 AT4G00300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040711 AT2G37730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196673 AT1G33250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080797 AT3G11420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129845 AT4G15240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00002559001
SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (527 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query501
pfam04646256 pfam04646, DUF604, Protein of unknown function, DU 1e-146
PLN03153537 PLN03153, PLN03153, hypothetical protein; Provisio 1e-132
pfam02434248 pfam02434, Fringe, Fringe-like 4e-12
>gnl|CDD|218189 pfam04646, DUF604, Protein of unknown function, DUF604 Back     alignment and domain information
 Score =  418 bits (1076), Expect = e-146
 Identities = 148/256 (57%), Positives = 188/256 (73%), Gaps = 2/256 (0%)

Query: 222 QNLAFYYGMGFGGGGFAISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTK 281
           QN+ F YGM FGGGGFAISY LA AL ++QD C+ R P+LYGSD+RI ACM ELGVPLTK
Sbjct: 1   QNIYFSYGMAFGGGGFAISYPLAAALARMQDGCIERYPALYGSDDRIHACMAELGVPLTK 60

Query: 282 HPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPVFPKMDRVKAVKRLMVPMKLDSAG 341
            PGFHQ D+ GDL G+L AHPVAP++SLHHLD+++P+FP M+R+ A++ LM   KLD A 
Sbjct: 61  EPGFHQYDVRGDLLGLLAAHPVAPLVSLHHLDVVDPIFPGMNRLDALRHLMRAAKLDPAR 120

Query: 342 LIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSFNTR 401
           ++QQSICY +   WTVSVSWGY VQIYRGI++ +E+  P RTF++W    +   F+FNTR
Sbjct: 121 ILQQSICYDRRYKWTVSVSWGYTVQIYRGILSPRELERPLRTFLNWYRRADYTAFAFNTR 180

Query: 402 PVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESNS-DCDWKIADPSR-IKRIEVYK 459
           PV+ +PCQ+P V++LS+   +     T +EY RH+      C W IADP R I +I V K
Sbjct: 181 PVTRDPCQRPRVFFLSSVREDRGRGTTKTEYTRHRVRRDPKCRWPIADPLRKIDQIRVSK 240

Query: 460 KPDPHLWDKPPRRNCC 475
           KPDP LW + PRRNCC
Sbjct: 241 KPDPDLWHRAPRRNCC 256


This family includes a conserved region found in several uncharacterized plant proteins. Length = 256

>gnl|CDD|215605 PLN03153, PLN03153, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|190308 pfam02434, Fringe, Fringe-like Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 501
PLN03153537 hypothetical protein; Provisional 100.0
PF04646255 DUF604: Protein of unknown function, DUF604; Inter 100.0
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.98
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 99.39
KOG3708 681 consensus Uncharacterized conserved protein [Funct 99.38
PLN03193408 beta-1,3-galactosyltransferase; Provisional 99.2
PLN03133636 beta-1,3-galactosyltransferase; Provisional 99.19
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 99.15
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 98.77
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 98.32
PF05679 499 CHGN: Chondroitin N-acetylgalactosaminyltransferas 94.15
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 93.25
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 91.18
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 90.91
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 90.55
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 90.53
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 88.81
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 86.3
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 85.27
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 82.79
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 82.27
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 81.27
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 81.22
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 81.2
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 80.39
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 80.21
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 80.06
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
Probab=100.00  E-value=2.7e-114  Score=910.62  Aligned_cols=471  Identities=39%  Similarity=0.710  Sum_probs=423.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccC----------------CCCC--CCCccc---cccc------ccccccccCCCC
Q 010780           26 SLPKTMICFIVLVSLPYVFYSLILLYS----------------SDTP--NHEPVI---RIHR------QHSRNKVLVPTH   78 (501)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~c--~~~~~~---~~~~------~~~~~~~~~~~~   78 (501)
                      .++++++++|+.+.++|++|++..+..                .+.|  +.+...   .+..      +|+.... +...
T Consensus        30 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  108 (537)
T PLN03153         30 AVVAVAALLLSTTAWLSLVFSGTTARCWHRFKDWEGSPDTLLWNKRYHHPIVTPLPPPPSSPSLPSSLLLDHFRN-RSLS  108 (537)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccCccccCcccccccccccccccccccccccccc-cccC
Confidence            588999999999999999999766543                3345  222111   0000      1111010 0111


Q ss_pred             CCCCCCCCCCCccceEEEEEecCCchhHhhHHHHHhhhcCCCccEEEEecCCCCCCCCCCCCCCeeecCCCCcccccCCC
Q 010780           79 VPSSDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSGDTSKFQYKNPI  158 (501)
Q Consensus        79 ~~~~~~~~~~~~l~~IvFgI~TS~k~~~~R~~~ik~Ww~~~~~rg~vfld~~~~~~~~~~~LP~v~is~dts~f~y~~~~  158 (501)
                      ..++.....+|+++||||||+|++++|++|++|||.||+++.|||+||+|+.+.+..++..+|+++|+.|+|+|.|+++.
T Consensus       109 ~~~~~~~~~~t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~~~~~~~~P~i~is~d~s~f~y~~~~  188 (537)
T PLN03153        109 EIERLKVEAELSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSPEEGDDSLPPIMVSEDTSRFRYTNPT  188 (537)
T ss_pred             CCCCcccCCCCccccEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCCCCCcCCCCCEEeCCCcccccccCCC
Confidence            12334555779999999999999999999999999999999999999999877654478889999999999999999999


Q ss_pred             CCcchhhHHHHHHHHHHcCCCCccEEEEEcCCeeeehHHHHHHHhcCCCCCCceEEccCCCcccccccccccccccccce
Q 010780          159 GTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQNLAFYYGMGFGGGGFA  238 (501)
Q Consensus       159 g~~~~~r~~~mv~e~~~~~~~~~~Wfv~~DDDTy~~~~nLv~~Ls~yD~~~p~YIG~~se~~~~~~~f~y~~a~GGaGiv  238 (501)
                      |++.++++++|+.|+++.+.+++|||||+||||||+++||+++|++||+++++|||..+|...++..|++.||||||||+
T Consensus       189 Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~qn~~f~~~fA~GGAG~~  268 (537)
T PLN03153        189 GHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSANSYFSHNMAFGGGGIA  268 (537)
T ss_pred             CcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEecccccccccccccccccccCCceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999888888888999999999


Q ss_pred             ecHHHHHHHHHHHHHhhhcCCCCCCchHHHHHHHHhcCCCeeecCCCcccccCCCcccccccCCCCceeeeccCCCCCCc
Q 010780          239 ISYALAKALEKIQDECLHRNPSLYGSDERIFACMMELGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHHLDLIEPV  318 (501)
Q Consensus       239 LSr~ll~~L~~~~d~C~~~~~~~~~~D~~Lg~Ci~~lGV~lt~~~gfhq~d~~gd~~g~~~s~~~~PlvSlHHl~~~~p~  318 (501)
                      ||++||++|.++++.|.++|...+++|.+||+||+++||+||+++||||+|++||++|++++||++|+|||||++.++|+
T Consensus       269 LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ~D~~Gd~~G~les~p~~P~vSlHH~~~~~p~  348 (537)
T PLN03153        269 ISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQWDIRGNAHGLLSSHPIAPFVSIHHVEAVDPF  348 (537)
T ss_pred             EcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCccccccCCCcchHhhcCCCCCceeeeeccccccc
Confidence            99999999999999999988878999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccHHHHHHhhhhccccCccceeEEEEEeecCcceEEEeecceEEEEEcCCCCccccccccccccccccCCCCcCccc
Q 010780          319 FPKMDRVKAVKRLMVPMKLDSAGLIQQSICYCKTRSWTVSVSWGYAVQIYRGIIAAKEMSVPARTFIDWNFGDEDVYFSF  398 (501)
Q Consensus       319 fp~~~~~~al~~l~~a~~~d~~~~lq~~ic~D~~~~w~~~vs~Gysv~~y~~~~~~~~l~~~~~Tf~~w~~~~~~~~~~f  398 (501)
                      ||+|++.+||+++..|+++|++++|||+||||..++|+|+||||||||+|++++.++||++||+||.+|++..+.++|+|
T Consensus       349 fP~~~~~~~~~~l~~a~~~d~~~~lq~siCyd~~~~w~fsvSwGysV~~y~~~~~~~dl~~~e~Tf~~w~~~~~~~~f~f  428 (537)
T PLN03153        349 YPGLSSLDSLKLFTRAMKVDPRSFLQRSICYDHTHHLTFSISLGYVVQVFPSIVLPRDLERSELTYSAWNKISHRNEFDL  428 (537)
T ss_pred             cCCcchHHHHHHHHHHhhcCchhHHHHHHhhhcccceeEEEeccEEEEEecCCCCchhhhhhHhhhhhhcccCCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999889999


Q ss_pred             cCCCCCCCCCCCCeEEEeeceeeecCCCceEEEEEEecccC-----CCCCCCCCCCCCceEEEEeecCCCCCCCCCcccc
Q 010780          399 NTRPVSTNPCQKPFVYYLSNALFNLNLNRTASEYIRHQESN-----SDCDWKIADPSRIKRIEVYKKPDPHLWDKPPRRN  473 (501)
Q Consensus       399 ~trp~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Y~r~~~~~-----~~c~~~~~~~~~~~~i~v~~~~~~~~w~~~prr~  473 (501)
                      ||||+.+++|+||++|||++|..  +++++++.|+|+++++     +.|.+.+.++.+|++|+|+++|++++|++|||||
T Consensus       429 ntr~~~r~~c~~p~~f~l~~~~~--~~~~~~~~Y~r~~~~~~~~~~~~C~~~~~~~~~v~~i~V~~~~~~~~w~~aprr~  506 (537)
T PLN03153        429 DTRDPIKSVCKKPILFFLKDVGR--EGNATLGTYSRARMKDDLKRKVFCFPRSLPLPYVEKIQVLGFPLSKNWHLVPRRL  506 (537)
T ss_pred             cCCCCCCCcccCceEEEeeeccc--cCCeeEEEEEEecccccccccccccccCCChhhceEEEEecCCCccchhhcchhh
Confidence            99999999999999999999964  4678999999997543     6788887655899999999999999999999999


Q ss_pred             cccccCCCCCceEEEEEeeecCCcccc
Q 010780          474 CCRILPTKKKGTMVVDVGVCREGEIAG  500 (501)
Q Consensus       474 cc~~~~~~~~~~~~~~i~~c~~~e~~~  500 (501)
                      ||+|++++ +++|+|+||.|++||+++
T Consensus       507 CC~v~~~~-~~~~~i~v~~C~~~e~~~  532 (537)
T PLN03153        507 CCRLNQTS-DELLTLTVGQCEKGSLGS  532 (537)
T ss_pred             heeccCCC-CCcEEEEEEeccCCcccc
Confidence            99999886 889999999999999975



>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query501
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 2e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
 Score =  124 bits (311), Expect = 2e-32
 Identities = 38/238 (15%), Positives = 82/238 (34%), Gaps = 25/238 (10%)

Query: 88  KTSLKHVVFGIGASSSTWEHRRNYIRTWWRPNVTRGHVWLDKPVKNSSIDHLLPPIKVSG 147
           +  L  +   +  + +    R + +   W   + +              + L P + V+ 
Sbjct: 9   ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQERLGPHLVVTQ 68

Query: 148 DTSKFQYKNPIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDH 207
            +++  +             ++ +E     +  +RWF   DDD       L ++L  +  
Sbjct: 69  CSAEHSHPA--------LSCKMAAEFDAFLVSGLRWFCHVDDDNYVNPKALLQLLKTFPQ 120

Query: 208 NEYYYIGYPS----------ESHLQNLAFYYGMGFGGGGFAISYALAKALEKIQDEC--L 255
           +   Y+G PS          +S  +     +    GG GF I+  LA  +         +
Sbjct: 121 DRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFV 180

Query: 256 HRNPSLYGSDERIFACMME--LGVPLTKHPGFHQLDIYGDLSGILMAHPVAPILSLHH 311
             +  +   D+     ++E  LG  L   P FH    + +   +L A  +   ++L +
Sbjct: 181 DTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS---HLETLQLLGAAQLPEQVTLSY 235


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query501
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 100.0
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-32  Score=276.59  Aligned_cols=236  Identities=17%  Similarity=0.218  Sum_probs=153.4

Q ss_pred             CCCCCCCCccceEEEEEecCCchhHhhHHHHHhhhcCC-CccEEEEecCCCCCCCCCCCCCCee----ecCCCCcccccC
Q 010780           82 SDDTEDKTSLKHVVFGIGASSSTWEHRRNYIRTWWRPN-VTRGHVWLDKPVKNSSIDHLLPPIK----VSGDTSKFQYKN  156 (501)
Q Consensus        82 ~~~~~~~~~l~~IvFgI~TS~k~~~~R~~~ik~Ww~~~-~~rg~vfld~~~~~~~~~~~LP~v~----is~dts~f~y~~  156 (501)
                      +++.++++++++|+|||+|++++|++|+++|+.||++. ..+++||+|.++.      .+|.+.    +..+.+. .|+ 
T Consensus         3 ~~~~~~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~------~l~~~~~~~~~~~~~~~-~~~-   74 (280)
T 2j0a_A            3 MNPGPLELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDE------RLQERLGPHLVVTQCSA-EHS-   74 (280)
T ss_dssp             ------CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCH------HHHHHHGGGEEECCC-------
T ss_pred             CCCCCCCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCcc------cccccccccceeccccc-ccc-
Confidence            34455778999999999999999999999998888764 4678888886422      233221    2222211 121 


Q ss_pred             CCCCcchhhHHHHHHHHHHcCCCCccEEEEEcCCeeeehHHHHHHHhcCCCCCCceEEccCCCcccc----------ccc
Q 010780          157 PIGTRDAIRISRIVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKYDHNEYYYIGYPSESHLQN----------LAF  226 (501)
Q Consensus       157 ~~g~~~~~r~~~mv~e~~~~~~~~~~Wfv~~DDDTy~~~~nLv~~Ls~yD~~~p~YIG~~se~~~~~----------~~f  226 (501)
                      .+++.  .|+..++.+   +..+++|||+++||||||+++||+++|++||+++++|||.+++.....          ..+
T Consensus        75 ~~~l~--~K~~~~~~~---~l~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~  149 (280)
T 2j0a_A           75 HPALS--CKMAAEFDA---FLVSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLV  149 (280)
T ss_dssp             --CCC--HHHHHHHHH---HHHHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC------------------
T ss_pred             ccchH--HHHHHHHHH---HhCCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCcccccccc
Confidence            12222  233333332   224799999999999999999999999999999999999998664211          112


Q ss_pred             ccccccccccceecHHHHHHHHHHHHHhhh--cCC-CCCCchHHHHHHHH-hcCCCeeecCCCcccccC-CCcccccccC
Q 010780          227 YYGMGFGGGGFAISYALAKALEKIQDECLH--RNP-SLYGSDERIFACMM-ELGVPLTKHPGFHQLDIY-GDLSGILMAH  301 (501)
Q Consensus       227 ~y~~a~GGaGivLSr~ll~~L~~~~d~C~~--~~~-~~~~~D~~Lg~Ci~-~lGV~lt~~~gfhq~d~~-gd~~g~~~s~  301 (501)
                      ++.||+||||||||++|+++|.+..+.|.-  ... ....+|..||+||+ ++||+++++++|||+... ++..+..-.+
T Consensus       150 ~~~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~  229 (280)
T 2j0a_A          150 RFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE  229 (280)
T ss_dssp             -CCEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG
T ss_pred             ccCcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc
Confidence            456899999999999999999998766611  111 12346888999999 899999999999998642 4443322222


Q ss_pred             CCCceeeeccCCC------CCCcCCCc---cHHHHHHhhh
Q 010780          302 PVAPILSLHHLDL------IEPVFPKM---DRVKAVKRLM  332 (501)
Q Consensus       302 ~~~PlvSlHHl~~------~~p~fp~~---~~~~al~~l~  332 (501)
                        ++.+|+|.+..      .+..|...   +|..+|..++
T Consensus       230 --~~~~s~~~~~~~~n~~~~~~~f~~~~dp~r~~~~h~~~  267 (280)
T 2j0a_A          230 --QVTLSYGVFEGKLNVIKLPGPFSHEEDPSRFRSLHCLL  267 (280)
T ss_dssp             --CSEEECEEETTEEECCCCCCSSCTTTCTTSHHHHHHHH
T ss_pred             --CcceecccccCccceeccCCccccccCCcceeeeeeee
Confidence              35589994321      12234322   4666666554




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query501
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 80.41
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]
Probab=80.41  E-value=1.3  Score=39.00  Aligned_cols=103  Identities=9%  Similarity=0.194  Sum_probs=58.0

Q ss_pred             HHHHHHHcCCCCccEEEEEcCCeeeehHHHHHHHhcC--CCCCCceEEccCC-----Ccc---------ccccccccccc
Q 010780          169 IVSESFRLGLKDVRWFVMGDDDTVFFLDNLARVLSKY--DHNEYYYIGYPSE-----SHL---------QNLAFYYGMGF  232 (501)
Q Consensus       169 mv~e~~~~~~~~~~Wfv~~DDDTy~~~~nLv~~Ls~y--D~~~p~YIG~~se-----~~~---------~~~~f~y~~a~  232 (501)
                      .+....+. . +.+|++++|+|.++.++.|..+++.+  +++..++.|....     ...         ....+...+..
T Consensus        79 a~N~gi~~-a-~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (255)
T d1qg8a_          79 LINQAIEM-A-EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAI  156 (255)
T ss_dssp             HHHHHHHH-C-CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTS
T ss_pred             cccccccc-c-ccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEeeeecccchhhhhhhcccc
Confidence            33444444 2 56999999999999876666555543  3444444443210     000         00111223456


Q ss_pred             ccccceecHHHHHHHHHHHHHhhhcCC-CCCCchHHHHHHHH
Q 010780          233 GGGGFAISYALAKALEKIQDECLHRNP-SLYGSDERIFACMM  273 (501)
Q Consensus       233 GGaGivLSr~ll~~L~~~~d~C~~~~~-~~~~~D~~Lg~Ci~  273 (501)
                      +++++++++.+++++........+... ....+|..+...+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~  198 (255)
T d1qg8a_         157 DHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN  198 (255)
T ss_dssp             CGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT
T ss_pred             cchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH
Confidence            889999999999998776533322111 12356777765553