Citrus Sinensis ID: 010815
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 500 | 2.2.26 [Sep-21-2011] | |||||||
| P59099 | 442 | Amino-acid acetyltransfer | yes | no | 0.798 | 0.902 | 0.315 | 1e-48 | |
| Q9CMJ6 | 440 | Amino-acid acetyltransfer | yes | no | 0.776 | 0.881 | 0.298 | 1e-47 | |
| P22567 | 432 | Amino-acid acetyltransfer | yes | no | 0.404 | 0.467 | 0.490 | 6e-47 | |
| Q02EG0 | 432 | Amino-acid acetyltransfer | yes | no | 0.404 | 0.467 | 0.490 | 6e-47 | |
| B7V594 | 432 | Amino-acid acetyltransfer | yes | no | 0.404 | 0.467 | 0.490 | 6e-47 | |
| A6VDY0 | 432 | Amino-acid acetyltransfer | yes | no | 0.404 | 0.467 | 0.490 | 7e-47 | |
| A4XP61 | 432 | Amino-acid acetyltransfer | yes | no | 0.404 | 0.467 | 0.480 | 6e-45 | |
| B0KP70 | 432 | Amino-acid acetyltransfer | yes | no | 0.77 | 0.891 | 0.305 | 5e-44 | |
| P0A100 | 432 | Amino-acid acetyltransfer | yes | no | 0.77 | 0.891 | 0.305 | 7e-44 | |
| P0A0Z9 | 432 | Amino-acid acetyltransfer | yes | no | 0.77 | 0.891 | 0.305 | 7e-44 |
| >sp|P59099|ARGA_BUCAP Amino-acid acetyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=argA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 217/478 (45%), Gaps = 79/478 (16%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
++ DI LH LGIR ++V G+ QI+ L E+ + Y R+TD SL +AAG +
Sbjct: 44 IINDIGLLHSLGIRLIVVYGSCPQINANLKEKNIKITYHKYIRVTDLLSLEQVKQAAGRL 103
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
++ I A+LS + N G ++V SGNF+ A+ G VD G
Sbjct: 104 QLDITARLSMS--LSNTPLQG-------ANINVVSGNFIIAQPLG----VDDG------- 143
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
+ Y SG + + + A C L A LI + +
Sbjct: 144 --------------------IDYCHSGRIRRID--KKAINCQLENGAIVLIGPVAVSVTG 181
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKT 249
ES +L EIA + E + F S V SQ GKT
Sbjct: 182 ESFNL-----------------TSEEIATQVSIKLKAEKMIGFC---SKQGVIDSQ-GKT 220
Query: 250 FSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 309
SE N + G G + S + L + C+ GV R
Sbjct: 221 ISELLPNNIQNEIKKLEGKGDYISST----------------IRFLRGSIKACKSGVNRS 264
Query: 310 HLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR 369
HL+ G LL ELF RDG+GT + + E R A + D+ GI ++I+PL + G LVRR
Sbjct: 265 HLISYHKNGALLQELFSRDGIGTQMVMESAEKIRQANINDIGGILELIRPLEKKGILVRR 324
Query: 370 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 429
+ E+L +D F ++ER+ IACAAL+PFFKEK GE+A + V P+ R +GD LL +
Sbjct: 325 SREQLEMEVDKFTIIERDNLTIACAALYPFFKEKIGEMACVAVHPDYRNSSRGDLLLQTM 384
Query: 430 EKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487
+ A L L +F+LTT++ WF+ RGF +E++PE ++K N R SK M L
Sbjct: 385 KLNAKKLNLKKIFVLTTQSIHWFQERGFILVDVEILPESKKKMYNYQRCSKILMIDLF 442
|
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|Q9CMJ6|ARGA_PASMU Amino-acid acetyltransferase OS=Pasteurella multocida (strain Pm70) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 225/483 (46%), Gaps = 95/483 (19%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
++ DI+ LH LGI+ VLV G QI++LL + E+ Y RITD SL +A G +
Sbjct: 42 IINDISLLHSLGIKLVLVFGARYQINELLQQHQIESVYHKNIRITDLTSLELVKQAVGKL 101
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
I ++LS P H + V SGNF+ A+ G VD G
Sbjct: 102 NYDIASRLSLRLP-------------HSPLIDVVSGNFVLAQPIG----VDDG------- 137
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
+ Y SG++ NT + + D+ ++ GPI
Sbjct: 138 --------------------IDYQLSGKIRRINTESIQQ------QLDRDAIVLIGPI-- 169
Query: 190 ESGHLIRFLTLQEADSLIRQ--RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNG 247
A S+ + + EIA+ + E + F + I +N
Sbjct: 170 -------------APSVTGESFNLPFEEIASQLAIKLKAEKLIGFSATQGI----LDENN 212
Query: 248 KTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE----LAAAAFVCR 303
+T S+ L + + +L + N Y S L AA CR
Sbjct: 213 QTISD-----------------LLPQDAELYLA---KLIQQNQYHSSQARFLQAAIEACR 252
Query: 304 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 363
G++R HL+ G LL ELF RDG+GT ++ + E R A V+D+ + ++I+PL +
Sbjct: 253 FGIKRSHLISYEEDGSLLQELFTRDGVGTQLSMEHSETIRLATVSDIPALLELIRPLEQQ 312
Query: 364 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 423
G LV+R+ E+L ++ + +++R+G IIACAAL + EK E+A + V P+ R +GD
Sbjct: 313 GILVKRSREQLEMEINQYTIIDRDGVIIACAALNCYADEKMAEMACVAVHPDYRNSSRGD 372
Query: 424 KLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483
LL+ I+K+A LG++ LF+LTTRT WF+ RGF+ I +P+++R+ N R SK +
Sbjct: 373 ILLEAIQKRAKQLGIEKLFVLTTRTVHWFQERGFQLAEIADLPDKKRQHYNYQRRSKILI 432
Query: 484 KKL 486
+ L
Sbjct: 433 QAL 435
|
Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P22567|ARGA_PSEAE Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=argA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q02EG0|ARGA_PSEAB Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain UCBPP-PA14) (taxid: 208963) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B7V594|ARGA_PSEA8 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain LESB58) (taxid: 557722) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A6VDY0|ARGA_PSEA7 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain PA7) (taxid: 381754) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A4XP61|ARGA_PSEMY Amino-acid acetyltransferase OS=Pseudomonas mendocina (strain ymp) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 2/204 (0%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L+RL + Y EL AAA CR GV R H++ G LL ELF R G GT+VA + +E
Sbjct: 229 LARLGSNYQGELLDAAAQACRGGVGRSHIVSYATDGALLSELFTRTGNGTLVAQEQFESL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REATIEDVGGLIELISPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
CGE+A + V+P+ R G+GD+LL IE +A + GL LF+LTTRTA WF+ RGF S+
Sbjct: 349 DCGELACLAVNPDYRHGGRGDELLARIEARARAQGLKTLFVLTTRTAHWFRERGFEPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNSK + K L
Sbjct: 409 ERMPAARASLYNYQRNSKVFEKAL 432
|
Pseudomonas mendocina (strain ymp) (taxid: 399739) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B0KP70|ARGA_PSEPG Amino-acid acetyltransferase OS=Pseudomonas putida (strain GB-1) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 223/485 (45%), Gaps = 100/485 (20%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+V D+ LH LG+R VLV G+ QI+ L++RG Y RITD+ +L ++A G +
Sbjct: 40 IVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGLTPHYHRGMRITDAATLDCVIDAVGAL 99
Query: 70 RMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 126
R+ IEA+LS P+ R + VASGN + A+ GV++GVDY TGE
Sbjct: 100 RLAIEARLSMDIAASPMQGSR------------LRVASGNLVTARPIGVLEGVDYHHTGE 147
Query: 127 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 186
V++VD + LD +V+LS LGYS +GE+ N +VAT A+ + ADKL+ P
Sbjct: 148 VRRVDRKGISRLLDERSIVLLSPLGYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEP 207
Query: 187 -ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245
+LD G L+R L Q+ + QR+ S+ + A AE C G V ++
Sbjct: 208 GLLDADGKLVRELRPQQVAPHL-QRLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAE 262
Query: 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVC 302
+G +E F G G G S++ F + + + + G L S L +
Sbjct: 263 DGALLTE----LFTRG-----GGGTLVSQEQFEVVREASIEDVGGLLELISPLEEQGILV 313
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 362
RR +++++ +E
Sbjct: 314 RRS------------------------------------------------REVLEREIE 325
Query: 363 SGALVRRTDEELLKALDSFY-VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 421
++V R E ++ A + Y + + E +AC A V+PE R G+
Sbjct: 326 QFSVVER--EGMIIACAALYPIADSEAGELACLA----------------VNPEYRHGGR 367
Query: 422 GDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481
GD+LL+ IE +A +GL+ LF+LTTRTA WF+ RGF +E +P R N RNSK
Sbjct: 368 GDELLERIESRARQMGLNTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYNYQRNSKI 427
Query: 482 YMKKL 486
+ K L
Sbjct: 428 FEKAL 432
|
Pseudomonas putida (strain GB-1) (taxid: 76869) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A100|ARGA_PSEPU Amino-acid acetyltransferase OS=Pseudomonas putida GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 222/485 (45%), Gaps = 100/485 (20%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+V D+ LH LG+R VLV G+ QI+ L++RG Y RITD+ +L ++A G +
Sbjct: 40 IVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGLTPHYHRGMRITDAATLDCVIDAVGAL 99
Query: 70 RMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 126
R+ IEA+LS P+ R + VASGN + A+ GV++GVDY TGE
Sbjct: 100 RLAIEARLSMDIAASPMQGSR------------LRVASGNLVTARPIGVLEGVDYHHTGE 147
Query: 127 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 186
V++VD + LD +V+LS LGYS +GE+ N +VAT A+ + ADKL+ P
Sbjct: 148 VRRVDRKGISRLLDERSIVLLSPLGYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEP 207
Query: 187 -ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245
+LD G L+R L Q+ + QR+ S+ + A AE C G V ++
Sbjct: 208 GLLDADGRLVRELRPQQVAPHL-QRLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAE 262
Query: 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVC 302
+G +E F G G G S++ F + + + + G L S L +
Sbjct: 263 DGALLTE----LFTRG-----GGGTLVSQEQFEVVREATIEDVGGLLELISPLEEQGILV 313
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 362
RR +++++ +E
Sbjct: 314 RRS------------------------------------------------REVLEREIE 325
Query: 363 SGALVRRTDEELLKALDSFY-VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 421
++V R E ++ A + Y + + E +AC A V+PE R G+
Sbjct: 326 QFSVVER--EGMIIACAALYPIADSEAGELACLA----------------VNPEYRHGGR 367
Query: 422 GDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481
GD+LL+ IE +A +GL LF+LTTRTA WF+ RGF +E +P R N RNSK
Sbjct: 368 GDELLERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYNYQRNSKI 427
Query: 482 YMKKL 486
+ K L
Sbjct: 428 FEKPL 432
|
Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A0Z9|ARGA_PSEPK Amino-acid acetyltransferase OS=Pseudomonas putida (strain KT2440) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 222/485 (45%), Gaps = 100/485 (20%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+V D+ LH LG+R VLV G+ QI+ L++RG Y RITD+ +L ++A G +
Sbjct: 40 IVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGLTPHYHRGMRITDAATLDCVIDAVGAL 99
Query: 70 RMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 126
R+ IEA+LS P+ R + VASGN + A+ GV++GVDY TGE
Sbjct: 100 RLAIEARLSMDIAASPMQGSR------------LRVASGNLVTARPIGVLEGVDYHHTGE 147
Query: 127 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 186
V++VD + LD +V+LS LGYS +GE+ N +VAT A+ + ADKL+ P
Sbjct: 148 VRRVDRKGISRLLDERSIVLLSPLGYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEP 207
Query: 187 -ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245
+LD G L+R L Q+ + QR+ S+ + A AE C G V ++
Sbjct: 208 GLLDADGRLVRELRPQQVAPHL-QRLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAE 262
Query: 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVC 302
+G +E F G G G S++ F + + + + G L S L +
Sbjct: 263 DGALLTE----LFTRG-----GGGTLVSQEQFEVVREATIEDVGGLLELISPLEEQGILV 313
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 362
RR +++++ +E
Sbjct: 314 RRS------------------------------------------------REVLEREIE 325
Query: 363 SGALVRRTDEELLKALDSFY-VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 421
++V R E ++ A + Y + + E +AC A V+PE R G+
Sbjct: 326 QFSVVER--EGMIIACAALYPIADSEAGELACLA----------------VNPEYRHGGR 367
Query: 422 GDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481
GD+LL+ IE +A +GL LF+LTTRTA WF+ RGF +E +P R N RNSK
Sbjct: 368 GDELLERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYNYQRNSKI 427
Query: 482 YMKKL 486
+ K L
Sbjct: 428 FEKPL 432
|
Pseudomonas putida (strain KT2440) (taxid: 160488) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 500 | ||||||
| 224095037 | 560 | predicted protein [Populus trichocarpa] | 0.978 | 0.873 | 0.823 | 0.0 | |
| 255568615 | 705 | N-acetyltransferase, putative [Ricinus c | 0.982 | 0.696 | 0.784 | 0.0 | |
| 356540624 | 607 | PREDICTED: amino-acid acetyltransferase- | 0.978 | 0.805 | 0.804 | 0.0 | |
| 356496999 | 605 | PREDICTED: amino-acid acetyltransferase- | 0.978 | 0.808 | 0.799 | 0.0 | |
| 356565491 | 565 | PREDICTED: amino-acid acetyltransferase- | 0.974 | 0.861 | 0.797 | 0.0 | |
| 449499852 | 577 | PREDICTED: amino-acid acetyltransferase- | 0.974 | 0.844 | 0.781 | 0.0 | |
| 449448208 | 634 | PREDICTED: amino-acid acetyltransferase- | 0.974 | 0.768 | 0.781 | 0.0 | |
| 375155311 | 616 | N-acetylglutamate synthase [Cucurbita ma | 0.978 | 0.793 | 0.782 | 0.0 | |
| 3445208 | 620 | putative amino acid acetyltransferase [A | 0.986 | 0.795 | 0.764 | 0.0 | |
| 297821519 | 609 | hypothetical protein ARALYDRAFT_481154 [ | 0.984 | 0.807 | 0.765 | 0.0 |
| >gi|224095037|ref|XP_002310336.1| predicted protein [Populus trichocarpa] gi|222853239|gb|EEE90786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/494 (82%), Positives = 447/494 (90%), Gaps = 5/494 (1%)
Query: 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEA 65
P+L + FLHHLGI+FVLVPGTHVQI+ LL+ERGHE K++G+YRITDSE+LAA+MEA
Sbjct: 71 PFLDSILKATFLHHLGIKFVLVPGTHVQINNLLAERGHEPKHVGQYRITDSEALAASMEA 130
Query: 66 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 125
AG IRMMIEAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVVDGVD+GATG
Sbjct: 131 AGKIRMMIEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVDGVDFGATG 190
Query: 126 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 185
EVKKVDVTRMRERLDGGC+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLIC+IDG
Sbjct: 191 EVKKVDVTRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDG 250
Query: 186 PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245
PILDESGHLIRFLTL+EAD LIR+R KQSEIAA+YVKAV +ED+T H+DSIG + SS
Sbjct: 251 PILDESGHLIRFLTLEEADMLIRKRAKQSEIAAHYVKAVGDEDLTFLEHNDSIGILASSL 310
Query: 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 305
NGK S R ATF NGVGFDNGNG QGFAIGG+E SRLNGYLSELAAAAFVC+ G
Sbjct: 311 NGKALSGRHSATFQNGVGFDNGNG-----QGFAIGGEELQSRLNGYLSELAAAAFVCKGG 365
Query: 306 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 365
VQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTDL+GI+QIIQPL ESG
Sbjct: 366 VQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVTDLAGIRQIIQPLEESGT 425
Query: 366 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 425
LVRRTDEELLKAL ++ VVEREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGDKL
Sbjct: 426 LVRRTDEELLKALYAYVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKL 485
Query: 426 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 485
LD+IE++A+SLGL+ LFLLTTRTADWF RGF ECSI++IPEERRK+INLSRNSKYY KK
Sbjct: 486 LDFIERRASSLGLETLFLLTTRTADWFNRRGFSECSIQLIPEERRKKINLSRNSKYYTKK 545
Query: 486 LLPDTSGIIVDRAF 499
LLPDTSGI V+RAF
Sbjct: 546 LLPDTSGISVNRAF 559
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568615|ref|XP_002525281.1| N-acetyltransferase, putative [Ricinus communis] gi|223535439|gb|EEF37109.1| N-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/510 (78%), Positives = 447/510 (87%), Gaps = 19/510 (3%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
++QDIAFLHHLGIRFVLVPGTHVQID LL+ERGHEA+Y+G YRITD+E+L+A+MEAAG I
Sbjct: 108 LLQDIAFLHHLGIRFVLVPGTHVQIDNLLAERGHEAQYVGPYRITDTEALSASMEAAGKI 167
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
RM++EAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVV+GVD+GATGEVKK
Sbjct: 168 RMLMEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVEGVDFGATGEVKK 227
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
VDVTRMRERLD C+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILD
Sbjct: 228 VDVTRMRERLDANCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILD 287
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKT 249
ESGHLIR+L ++EAD+LIR+R KQSEIAANYVKAV +ED T HSDS+ + SSQNGK
Sbjct: 288 ESGHLIRYLAIEEADALIRKRAKQSEIAANYVKAVGKEDFTSIEHSDSVRVISSSQNGKP 347
Query: 250 F---SERRIATFNNGVGFDNGNG----------------LWSSEQGFAIGGQERLSRLNG 290
S +++ NG + +G LWS EQGFAIGG ER SRLNG
Sbjct: 348 INGDSVNVMSSSQNGKPVNGRHGATFHFQNGVGFGNGNGLWSGEQGFAIGGHERQSRLNG 407
Query: 291 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 350
YLSELAAA FVC+ GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A++TDL
Sbjct: 408 YLSELAAATFVCKGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARMTDL 467
Query: 351 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 410
SGI+QIIQPL +SG LVRRTDEELLKALDSF V+EREGQIIACAALFPFF+EKCGEVAAI
Sbjct: 468 SGIRQIIQPLEDSGVLVRRTDEELLKALDSFVVMEREGQIIACAALFPFFEEKCGEVAAI 527
Query: 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 470
VSPECRGQGQGDKLLD+IEKKA+SLGL+MLFLLTTRTADWFK RGF ECSIEMIP++RR
Sbjct: 528 AVSPECRGQGQGDKLLDFIEKKASSLGLEMLFLLTTRTADWFKRRGFSECSIEMIPQKRR 587
Query: 471 KRINLSRNSKYYMKKLLPDTSGIIVDRAFR 500
K+INLSRNSKYYMKKLLP+TSGI ++R +
Sbjct: 588 KKINLSRNSKYYMKKLLPNTSGITINRQLQ 617
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540624|ref|XP_003538787.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/491 (80%), Positives = 437/491 (89%), Gaps = 2/491 (0%)
Query: 6 PWL-VMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 64
P+L V+++DIAFL+HLGIRFVLVPGTHVQIDKLL+ERG + Y+GRYRITD ESL AAME
Sbjct: 111 PFLDVILKDIAFLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAME 170
Query: 65 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGAT 124
AAGGIR+MIEAKLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+T
Sbjct: 171 AAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGST 230
Query: 125 GEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID 184
GEVKKVDVTRMRERLDGGC+V+L+NLGYSSSGEVLNCNTYEVATACALAI ADKLICIID
Sbjct: 231 GEVKKVDVTRMRERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIID 290
Query: 185 GPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244
GPILDESGHLIRFL LQEAD LIR+R KQS+ AANYVKAV EE ++ G+V S
Sbjct: 291 GPILDESGHLIRFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSP 350
Query: 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 304
G F+E ATF+NGVGF+NGNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVCR
Sbjct: 351 PIG-CFTEWHNATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRG 409
Query: 305 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 364
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTRTA+V D+SGIKQ+I PL SG
Sbjct: 410 GVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASG 469
Query: 365 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424
LV+RTDEELLK LDSF VVEREG IIACAA+FP F+EKCGEVA I VSP+CRGQGQGDK
Sbjct: 470 ILVKRTDEELLKTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDK 529
Query: 425 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484
LLDY+EKKA+SLG +MLFLLTTRTADWF RGF ECSI+ IPE++R+ INLSRNSKYYMK
Sbjct: 530 LLDYMEKKASSLGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMK 589
Query: 485 KLLPDTSGIIV 495
KLLP+ SGI V
Sbjct: 590 KLLPNISGITV 600
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496999|ref|XP_003517352.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/493 (79%), Positives = 439/493 (89%), Gaps = 4/493 (0%)
Query: 3 FFIPWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 62
+F P +++DIAFL+HLGIRFVLVPGTHVQIDKLL+ERG + KY+GRYRITD ESL AA
Sbjct: 110 YFNP---ILKDIAFLNHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDDESLEAA 166
Query: 63 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 122
MEAAGGIR+MIEAKLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G
Sbjct: 167 MEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFG 226
Query: 123 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 182
+TGEVKKVDV+RMRERLDGGC+VIL+NLGYSSSGEVLNCNTYEVATACALAI ADKLIC+
Sbjct: 227 STGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICL 286
Query: 183 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242
IDGPILDESG LIRFL LQEAD LIR+R +QSE AANYVKAV EE +++ G+V
Sbjct: 287 IDGPILDESGRLIRFLPLQEADMLIRKRAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVK 346
Query: 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 302
S G+ F+E ATF+NGVGF++GNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVC
Sbjct: 347 SPPIGR-FTEWHNATFHNGVGFESGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVC 405
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 362
R GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTRTA V D+SGIKQ+IQPL
Sbjct: 406 RGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAGVKDISGIKQLIQPLEA 465
Query: 363 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 422
SG LV+RTDEELLK LDSF VVEREG IIACAALFP F+EKCGEVA I VSP+CRGQGQG
Sbjct: 466 SGILVKRTDEELLKTLDSFIVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQG 525
Query: 423 DKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 482
DKLLDY+EKKA+SLGL+MLFLLTTRTADWF RGF ECSI+ +PE++R+ INLSRNSKYY
Sbjct: 526 DKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYLPEKKRRMINLSRNSKYY 585
Query: 483 MKKLLPDTSGIIV 495
MKKLLP+ SGI V
Sbjct: 586 MKKLLPNISGITV 598
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565491|ref|XP_003550973.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/490 (79%), Positives = 432/490 (88%), Gaps = 3/490 (0%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAMEAAG I
Sbjct: 76 ILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAMEAAGRI 135
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+MIEAKLSPGP I NIRRHGD+SR HEVGVSVASGNFLAAKR+GVV G+D+G+TGEVKK
Sbjct: 136 RLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGSTGEVKK 195
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
VD++RMRERLDG C+VILSNLGYSSSGEVLNCN YEVATACALA+ ADKLICI DGPILD
Sbjct: 196 VDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICITDGPILD 255
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKT 249
ESGHLIRFL LQEAD LIR++V++SE AANYVKAVAEE + + G+V+S +NGK
Sbjct: 256 ESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFN--GAVHSPRNGKP 313
Query: 250 FSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 309
FSE +TF+NGVGFDNGNGL S + GFAIGGQE LSR NGYLSELAAAAFVCR GVQRV
Sbjct: 314 FSEYHNSTFHNGVGFDNGNGL-SGKHGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRV 372
Query: 310 HLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR 369
HLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD SGIKQ+IQPL ESG LV+R
Sbjct: 373 HLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEESGILVKR 432
Query: 370 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 429
TDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI VSP+CRGQGQGDKLLDYI
Sbjct: 433 TDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYI 492
Query: 430 EKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489
EKKA+S+G +MLFLLTTRTADWF RGF ECSI+ IPE++RK INLSR SKYYMKKLLP+
Sbjct: 493 EKKASSIGFEMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKTINLSRKSKYYMKKLLPN 552
Query: 490 TSGIIVDRAF 499
SGI V F
Sbjct: 553 KSGITVSSRF 562
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499852|ref|XP_004160934.1| PREDICTED: amino-acid acetyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/503 (78%), Positives = 431/503 (85%), Gaps = 16/503 (3%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DIAFLHHLGIRF+LVPGTHV IDKLL+ERG + ++G+YR+TDS+SLAAAMEAAGGI
Sbjct: 77 LLKDIAFLHHLGIRFILVPGTHVLIDKLLAERGSKPNFVGQYRVTDSQSLAAAMEAAGGI 136
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYGATGEVKK
Sbjct: 137 RVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYGATGEVKK 196
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
VDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILD
Sbjct: 197 VDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILD 256
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY------- 242
E+G I FLTLQEAD LIR+R KQ EIAANYVK V +ED T + +DS GS++
Sbjct: 257 EAGRHISFLTLQEADMLIRERAKQCEIAANYVKVVGKEDFTRY--NDSNGSIHLQNGKAS 314
Query: 243 -----SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 297
QNG F + F NGVGF +G GLWSSEQGF IGG ER S +NGYLSELAA
Sbjct: 315 LEAHTPFQNGVGFGPHHMPVFQNGVGFGHGTGLWSSEQGFPIGG-ERNSHMNGYLSELAA 373
Query: 298 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQII 357
AAFVCR GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A+V+DL GI+QII
Sbjct: 374 AAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARVSDLRGIRQII 433
Query: 358 QPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417
PL +G LVRR+DEELL++LDSF VVEREGQIIACAALFPFF+E+CGE+AAI VS ECR
Sbjct: 434 LPLEMAGTLVRRSDEELLESLDSFVVVEREGQIIACAALFPFFEERCGEIAAIAVSAECR 493
Query: 418 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSR 477
GQGQGDKLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR +INLSR
Sbjct: 494 GQGQGDKLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRRSKINLSR 553
Query: 478 NSKYYMKKLLPDTSGI-IVDRAF 499
NSKYYMKKLLPD + I VDRAF
Sbjct: 554 NSKYYMKKLLPDRNRIGSVDRAF 576
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448208|ref|XP_004141858.1| PREDICTED: amino-acid acetyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/503 (78%), Positives = 431/503 (85%), Gaps = 16/503 (3%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DIAFLHHLGIRF+LVPGTHV IDKLL+ERG + ++G+YR+TDS+SLAAAMEAAGGI
Sbjct: 134 LLKDIAFLHHLGIRFILVPGTHVLIDKLLAERGSKPNFVGQYRVTDSQSLAAAMEAAGGI 193
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYGATGEVKK
Sbjct: 194 RVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYGATGEVKK 253
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
VDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILD
Sbjct: 254 VDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILD 313
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY------- 242
E+G I FLTLQEAD LIR+R KQ EIAANYVK V +ED T + +DS GS++
Sbjct: 314 EAGRHISFLTLQEADMLIRERAKQCEIAANYVKVVGKEDFTRY--NDSNGSIHLQNGKAS 371
Query: 243 -----SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 297
QNG F + F NGVGF +G GLWSSEQGF IGG ER S +NGYLSELAA
Sbjct: 372 LEAHTPFQNGVGFGPHHMPVFQNGVGFGHGTGLWSSEQGFPIGG-ERNSHMNGYLSELAA 430
Query: 298 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQII 357
AAFVCR GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A+V+DL GI+QII
Sbjct: 431 AAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARVSDLRGIRQII 490
Query: 358 QPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417
PL +G LVRR+DEELL++LDSF VVEREGQIIACAALFPFF+E+CGE+AAI VS ECR
Sbjct: 491 LPLEMAGTLVRRSDEELLESLDSFVVVEREGQIIACAALFPFFEERCGEIAAIAVSAECR 550
Query: 418 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSR 477
GQGQGDKLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR +INLSR
Sbjct: 551 GQGQGDKLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRRSKINLSR 610
Query: 478 NSKYYMKKLLPDTSGI-IVDRAF 499
NSKYYMKKLLPD + I VDRAF
Sbjct: 611 NSKYYMKKLLPDRNRIGSVDRAF 633
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375155311|gb|AFA37979.1| N-acetylglutamate synthase [Cucurbita maxima x Cucurbita moschata] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/497 (78%), Positives = 427/497 (85%), Gaps = 8/497 (1%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DIAFLHHLGIRF+LVPGTHV IDKLL+ERG + ++G+YR+TD++SLAAAMEAAGGI
Sbjct: 120 LLEDIAFLHHLGIRFILVPGTHVLIDKLLAERGSKPNFVGQYRVTDNQSLAAAMEAAGGI 179
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYGATGEVKK
Sbjct: 180 RVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYGATGEVKK 239
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
VDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILD
Sbjct: 240 VDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILD 299
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH---SDSIGSVYSS-- 244
E+G I FLTLQEAD LIR+R K EIAANYVK V +E T H DS G ++ +
Sbjct: 300 ETGRHISFLTLQEADKLIRERAKHCEIAANYVKVVGKEGFTHSNHYINDDSNGGIHHTPT 359
Query: 245 -QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 303
NG F + F NGVGF +G+GLWSSEQGF IGG ER S LNGYLSELAAAAFVCR
Sbjct: 360 FPNGVGFGSHHVPVFQNGVGFGHGSGLWSSEQGFPIGG-ERNSHLNGYLSELAAAAFVCR 418
Query: 304 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 363
GVQRVH+LDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A V+DL GI+QIIQPL +
Sbjct: 419 GGVQRVHVLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMASVSDLRGIRQIIQPLEMA 478
Query: 364 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 423
G LV RTDEELL++L+SF VVEREGQIIACAALFPFF+E+CGE+AAI VS ECRGQGQGD
Sbjct: 479 GTLVPRTDEELLESLNSFVVVEREGQIIACAALFPFFEERCGEIAAIAVSAECRGQGQGD 538
Query: 424 KLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483
KLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR+RINLSR SKYYM
Sbjct: 539 KLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRRRRINLSRKSKYYM 598
Query: 484 KKLLPDTSGI-IVDRAF 499
KKLLPD + I VDRAF
Sbjct: 599 KKLLPDRNRIGSVDRAF 615
|
Source: Cucurbita maxima x Cucurbita moschata Species: Cucurbita maxima x Cucurbita moschata Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3445208|gb|AAC32438.1| putative amino acid acetyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/496 (76%), Positives = 427/496 (86%), Gaps = 3/496 (0%)
Query: 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 67
+ VQDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 122 ITCVQDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAG 181
Query: 68 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV 127
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG V
Sbjct: 182 AISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLV 241
Query: 128 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPI 187
KK+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+
Sbjct: 242 KKIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPV 301
Query: 188 LDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN- 246
LDE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 302 LDENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNN 361
Query: 247 --GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 304
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR
Sbjct: 362 HIGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRG 421
Query: 305 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 364
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESG
Sbjct: 422 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESG 481
Query: 365 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424
ALVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDK
Sbjct: 482 ALVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDK 541
Query: 425 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484
LLDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMK
Sbjct: 542 LLDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMK 601
Query: 485 KLLPDTSGIIVDRAFR 500
KLLPD SGI V R F+
Sbjct: 602 KLLPDRSGISVVRTFQ 617
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297821519|ref|XP_002878642.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] gi|297324481|gb|EFH54901.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/495 (76%), Positives = 427/495 (86%), Gaps = 3/495 (0%)
Query: 9 VMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 68
++++DIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 69 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 128
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 129 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 188
K+DV R+RERLD G +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPIL
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPIL 291
Query: 189 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 246
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 247 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 305
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKHTLTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 306 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 365
V RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR AKV DL+GI+QII PL ESGA
Sbjct: 412 VNRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTREAKVEDLAGIRQIITPLEESGA 471
Query: 366 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 425
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKL 531
Query: 426 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 485
LDYIEKKA++ GL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMKK
Sbjct: 532 LDYIEKKASAFGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMKK 591
Query: 486 LLPDTSGIIVDRAFR 500
LLPD SGI V R F+
Sbjct: 592 LLPDRSGISVVRTFQ 606
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 500 | ||||||
| TAIR|locus:2059165 | 609 | NAGS1 "N-acetyl-l-glutamate sy | 0.984 | 0.807 | 0.739 | 5.3e-191 | |
| TAIR|locus:2120130 | 613 | NAGS2 "N-acetyl-l-glutamate sy | 0.976 | 0.796 | 0.740 | 9.8e-190 | |
| UNIPROTKB|P22567 | 432 | argA "Amino-acid acetyltransfe | 0.404 | 0.467 | 0.490 | 9.6e-76 | |
| TIGR_CMR|CPS_0465 | 436 | CPS_0465 "amino-acid N-acetylt | 0.364 | 0.417 | 0.417 | 2.3e-68 | |
| UNIPROTKB|P0A6C5 | 443 | argA [Escherichia coli K-12 (t | 0.434 | 0.489 | 0.403 | 2.9e-68 | |
| TIGR_CMR|SO_4245 | 445 | SO_4245 "amino-acid acetyltran | 0.396 | 0.444 | 0.393 | 1.1e-62 | |
| UNIPROTKB|Q9KPQ0 | 445 | argA "Amino-acid acetyltransfe | 0.384 | 0.431 | 0.375 | 5.4e-61 | |
| TIGR_CMR|VC_2316 | 445 | VC_2316 "N-acetylglutamate syn | 0.384 | 0.431 | 0.375 | 5.4e-61 | |
| TIGR_CMR|CHY_2263 | 294 | CHY_2263 "acetylglutamate kina | 0.38 | 0.646 | 0.262 | 1e-14 | |
| UNIPROTKB|P0A4Y6 | 294 | argB "Acetylglutamate kinase" | 0.318 | 0.540 | 0.323 | 2.1e-13 |
| TAIR|locus:2059165 NAGS1 "N-acetyl-l-glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 5.3e-191, P = 5.3e-191
Identities = 366/495 (73%), Positives = 417/495 (84%)
Query: 9 VMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 68
++++DIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 69 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 128
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 129 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 188
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 189 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 246
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 247 -GKTFSERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 305
G+ E+ T LWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 306 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 365
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 366 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 425
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 426 LDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 485
LDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SKYYMKK
Sbjct: 532 LDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSKYYMKK 591
Query: 486 LLPDTSGIIVDRAFR 500
LLPD SGI V R F+
Sbjct: 592 LLPDRSGISVVRTFQ 606
|
|
| TAIR|locus:2120130 NAGS2 "N-acetyl-l-glutamate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1839 (652.4 bits), Expect = 9.8e-190, P = 9.8e-190
Identities = 365/493 (74%), Positives = 416/493 (84%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAAG I
Sbjct: 120 ILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAAGAI 179
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
+M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGEVKK
Sbjct: 180 SVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKK 239
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 240 IDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILD 299
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC-FGHSDSIGSVYSSQNGK 248
ESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++ S+QNG+
Sbjct: 300 ESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQNGR 359
Query: 249 TFS----ERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 304
S LW EQGFAIGG+ERLSRLNGYLSELAAAAFVCR
Sbjct: 360 AVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFVCRG 419
Query: 305 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 364
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL ESG
Sbjct: 420 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLEESG 479
Query: 365 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQGDK
Sbjct: 480 ILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQGDK 539
Query: 425 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484
LLDYIEKKA+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE RR+RINLSRNSKYYMK
Sbjct: 540 LLDYIEKKASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPESRRQRINLSRNSKYYMK 599
Query: 485 KLLPDTSGIIVDR 497
KL+PD SGI V R
Sbjct: 600 KLIPDRSGISVMR 612
|
|
| UNIPROTKB|P22567 argA "Amino-acid acetyltransferase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 9.6e-76, Sum P(2) = 9.6e-76
Identities = 100/204 (49%), Positives = 135/204 (66%)
Query: 285 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 463 EMIPEERRKRINLSRNSKYYMKKL 486
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
|
| TIGR_CMR|CPS_0465 CPS_0465 "amino-acid N-acetyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 76/182 (41%), Positives = 115/182 (63%)
Query: 305 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 364
GV+R H + LL ELF RDG GT++A D E TA + D++GI ++IQPL E G
Sbjct: 255 GVERCHCVSYQSDTALLQELFTRDGAGTLIAKDHKELIATATIDDVAGILELIQPLEEEG 314
Query: 365 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424
LV+R+ E L ++ F V+++E IIACAAL+P+ + K EVA + + P+ R +G++
Sbjct: 315 VLVKRSRELLEMEIEYFTVLKKEEVIIACAALYPYPEAKMAEVACVVIDPDYRKGNRGER 374
Query: 425 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484
+++ +E A GL LFLLTT + WF +GF E S+E +PE +++ N RNSK ++K
Sbjct: 375 IINALELSAKKKGLTSLFLLTTVSGHWFLEQGFVEASLERLPEGKKQMYNFQRNSKVFIK 434
Query: 485 KL 486
+
Sbjct: 435 DI 436
|
|
| UNIPROTKB|P0A6C5 argA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 425 (154.7 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 88/218 (40%), Positives = 128/218 (58%)
Query: 270 LWSSEQGFAIGGQERLSRLN-GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD 328
L+ +E + QE N G + L A CR GV+R HL+ G LL ELF RD
Sbjct: 225 LFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRD 284
Query: 329 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 388
G+GT + + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F +++R+
Sbjct: 285 GIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDN 344
Query: 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 448
IACAAL+PF +EK GE+A + V P+ R +G+ LL+ I +A GL LF+LTTR+
Sbjct: 345 TTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRS 404
Query: 449 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
WF+ RGF I+++PE +++ N R SK M L
Sbjct: 405 IHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADL 442
|
|
| TIGR_CMR|SO_4245 SO_4245 "amino-acid acetyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 78/198 (39%), Positives = 117/198 (59%)
Query: 283 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 342
E+ S G ++ L A+ CR GV R HL+ G LL ELF R+G+GT + ++ E
Sbjct: 242 EQGSACIGTMAFLKASIDACRNGVPRCHLVSYLDDGALLQELFSREGIGTQIVTESAERL 301
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A ++D+ GI +I+PL E G LVRR+ E+L ++ F ++ER+G +I CAAL+PF ++
Sbjct: 302 RRASISDIGGILNLIRPLEEQGILVRRSREQLEIEIEQFMLIERDGLVIGCAALYPFEED 361
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
GE A + V P+ R +G LL I +A S G LF LTTR+ WF GF +
Sbjct: 362 NAGEFACLVVHPDYRDADRGSLLLKNIIGQARSRGYSRLFALTTRSIHWFLEHGFVIEDV 421
Query: 463 EMIPEERRKRINLSRNSK 480
+ +P+++++ N R SK
Sbjct: 422 DALPQKKKQLYNYQRRSK 439
|
|
| UNIPROTKB|Q9KPQ0 argA "Amino-acid acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 354
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 355 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 474
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 475 LSRNSKYYMKKL 486
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|VC_2316 VC_2316 "N-acetylglutamate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 354
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 355 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 474
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 475 LSRNSKYYMKKL 486
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|CHY_2263 CHY_2263 "acetylglutamate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 56/213 (26%), Positives = 106/213 (49%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
++ D+ + +GI V+V G +I ++L++ ++ ++ R+TD A +E +
Sbjct: 44 VINDLVLMKFVGINPVVVHGGGPEISRMLNKLNIKSNFINGLRVTDE----ATLEV---V 96
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVD----GVDY---G 122
M++ K++ + I + G + VG+S + A +K + G +Y G
Sbjct: 97 EMVLVGKVNK-EIVGLIEKAGGKA----VGLSGKDAGLIKAHKKLAKNPEPTGEEYLDLG 151
Query: 123 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 182
GE+ +V+ + +D G + +++ +G + SGE N N EVA A+A++ADKLI +
Sbjct: 152 YVGEISEVNPEILLTLIDKGYIPVVAPVGSNGSGEFYNINADEVAAEVAVALKADKLIVL 211
Query: 183 IDGP--ILDESGH--LIRFLTLQEADSLIRQRV 211
D P +L+E L+ T+ E LI + V
Sbjct: 212 TDTPGILLNEKDENSLLSKATIAEVKELINRGV 244
|
|
| UNIPROTKB|P0A4Y6 argB "Acetylglutamate kinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 173 (66.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 57/176 (32%), Positives = 86/176 (48%)
Query: 13 DIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 72
D+AFL + GI V+V G QI +L G E + G +R+T E L A RM+
Sbjct: 52 DMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVA-------RMV 104
Query: 73 IEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGV-VDGV--DYGATGEVK 128
+ ++ G + N I HG + VG++ A R+ V VDGV D G G+V
Sbjct: 105 LFGQV--GRELVNLINAHGP----YAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVD 158
Query: 129 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID 184
+V+ M + + G + ++S L + G V N N A A A A+ A+KL+ + D
Sbjct: 159 QVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTD 214
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.VII.115.1 | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein (EC-2.7.2.8) (511 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.6145.3.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | ||||
| gw1.193.135.1 | annotation not avaliable (279 aa) | • | • | • | • | • | 0.914 | ||||
| estExt_fgenesh4_pm.C_LG_X0783 | delta-1-pyrroline-5-carboxylate synthetase (EC-2.7.2.11 1.2.1.41) (719 aa) | • | • | 0.909 | |||||||
| gw1.97.87.1 | hypothetical protein (637 aa) | • | 0.899 | ||||||||
| eugene3.01290011 | annotation not avaliable (139 aa) | • | 0.899 | ||||||||
| eugene3.00150904 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | ||||||||
| eugene3.00130573 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIX0409 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (411 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_2320019 | glutamate dehydrogenase (NAD(P)+) (EC-1.4.1.3) (412 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_2320006 | hypothetical protein (482 aa) | • | • | 0.849 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 500 | |||
| PLN02825 | 515 | PLN02825, PLN02825, amino-acid N-acetyltransferase | 0.0 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 4e-93 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 4e-73 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 1e-60 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 1e-59 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 2e-42 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 4e-41 | |
| COG1246 | 153 | COG1246, ArgA, N-acetylglutamate synthase and rela | 2e-38 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 2e-25 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 5e-24 | |
| TIGR00761 | 231 | TIGR00761, argB, acetylglutamate kinase | 1e-22 | |
| PRK07757 | 152 | PRK07757, PRK07757, acetyltransferase; Provisional | 6e-21 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 8e-19 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 8e-17 | |
| PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate | 9e-17 | |
| cd04252 | 248 | cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acety | 1e-15 | |
| PRK07922 | 169 | PRK07922, PRK07922, N-acetylglutamate synthase; Va | 1e-14 | |
| PLN02512 | 309 | PLN02512, PLN02512, acetylglutamate kinase | 2e-14 | |
| PRK14058 | 268 | PRK14058, PRK14058, acetylglutamate/acetylaminoadi | 2e-13 | |
| CHL00202 | 284 | CHL00202, argB, acetylglutamate kinase; Provisiona | 9e-12 | |
| pfam13508 | 79 | pfam13508, Acetyltransf_7, Acetyltransferase (GNAT | 7e-11 | |
| cd04251 | 257 | cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glut | 8e-11 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 2e-10 | |
| pfam00583 | 80 | pfam00583, Acetyltransf_1, Acetyltransferase (GNAT | 3e-10 | |
| cd04301 | 65 | cd04301, NAT_SF, N-Acyltransferase superfamily: Va | 5e-10 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 9e-09 | |
| cd04249 | 252 | cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut | 1e-08 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 1e-07 | |
| PRK04531 | 398 | PRK04531, PRK04531, acetylglutamate kinase; Provis | 3e-06 | |
| COG0456 | 177 | COG0456, RimI, Acetyltransferases [General functio | 1e-05 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 5e-05 | |
| pfam13673 | 118 | pfam13673, Acetyltransf_10, Acetyltransferase (GNA | 7e-05 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 8e-05 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 1e-04 | |
| pfam13527 | 127 | pfam13527, Acetyltransf_9, Acetyltransferase (GNAT | 3e-04 | |
| cd02169 | 297 | cd02169, Citrate_lyase_ligase, Citrate lyase ligas | 8e-04 | |
| TIGR01575 | 131 | TIGR01575, rimI, ribosomal-protein-alanine acetylt | 0.001 | |
| pfam13420 | 154 | pfam13420, Acetyltransf_4, Acetyltransferase (GNAT | 0.004 |
| >gnl|CDD|215441 PLN02825, PLN02825, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 902 bits (2334), Expect = 0.0
Identities = 382/480 (79%), Positives = 423/480 (88%), Gaps = 3/480 (0%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
++QDI+ LH LGI+FVLVPGTHVQIDKLL+ERG E KY+G YRITDS +L A+MEAAG I
Sbjct: 37 ILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRITDSAALQASMEAAGKI 96
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+MIEAKLSPGP I N+RRHGD+SRWHEVGVSVASGNFLAAKR+GVV+GVD+GATGEVKK
Sbjct: 97 RVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKK 156
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
+DV+R++ERLD C+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 157 IDVSRIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGPILD 216
Query: 190 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKT 249
E+G LIRF+TL+EAD LIR+R KQSEIAANYVKAV ED + DS+ + + NG+
Sbjct: 217 ENGRLIRFMTLEEADMLIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRG 276
Query: 250 FSERRIAT--FNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ 307
F AT F NGVGFDNGNGL S EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GVQ
Sbjct: 277 FWGSGSATDSFQNGVGFDNGNGL-SGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQ 335
Query: 308 RVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALV 367
RVHLLDGTI GVLLLELF RDGMGTM+ASD+YEGTR A+V DL+GI+QII+PL ESG LV
Sbjct: 336 RVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILV 395
Query: 368 RRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLD 427
RRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLLD
Sbjct: 396 RRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLD 455
Query: 428 YIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487
YIEKKAASLGL+ LFLLTTRTADWF RGF ECSIE +PE RRKRINLSR SKYYMKKLL
Sbjct: 456 YIEKKAASLGLEKLFLLTTRTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515
|
Length = 515 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 4e-93
Identities = 103/218 (47%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+V DIA LH LGIR VLV G QID+ L+ERG E +Y RITD+ +L EAAG +
Sbjct: 38 IVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLRITDAAALECVKEAAGAV 97
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
R+ IEA LS G P + + V SGNF+ A+ GVVDGVD+G TGEV++
Sbjct: 98 RLEIEALLSMGLPNSPMAG---------ARIRVVSGNFVTARPLGVVDGVDFGHTGEVRR 148
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 188
+D +R +LD G +V+LS LGYS +GEV N + +VATA A+A++ADKLI + DGP +L
Sbjct: 149 IDADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLL 208
Query: 189 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAE 226
D+ G LIR LT QEA++L+ + A ++A E
Sbjct: 209 DDDGELIRELTAQEAEALLETGALLTNDTARLLQAAIE 246
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 4e-73
Identities = 94/192 (48%), Positives = 127/192 (66%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 354
L AA CR GV+R HL+ G LL ELF RDG+GTM+ + E R A + D+ GI
Sbjct: 250 LRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309
Query: 355 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414
++I+PL E G LVRR+ E+L + +D F V+ER+G II CAAL+PF +EK GE+A + V P
Sbjct: 310 ELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHP 369
Query: 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 474
+ RG G+G++LL IE++A LGL LF+LTTRTA WF RGF ++ +PE +R+ N
Sbjct: 370 DYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVDDLPEAKRQLYN 429
Query: 475 LSRNSKYYMKKL 486
R SK +K L
Sbjct: 430 YQRRSKVLVKDL 441
|
Length = 441 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 204 bits (523), Expect = 1e-60
Identities = 90/203 (44%), Positives = 121/203 (59%), Gaps = 16/203 (7%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
V DIA LH LGIR VLV G QI++ L+ RG E +Y R+TD+ +L +AAG +R
Sbjct: 46 VHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKGLRVTDAAALECVKQAAGELR 105
Query: 71 MMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV 127
+ IEA+LS P P+ + V SGNF+ A+ GV DGVDY TGEV
Sbjct: 106 LDIEARLSMGLPNTPMAGAH------------IRVVSGNFVTARPLGVDDGVDYQHTGEV 153
Query: 128 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP- 186
+++D +R +LD G +V+LS LGYS +GE N EVAT A+A++ADKLI +
Sbjct: 154 RRIDAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQG 213
Query: 187 ILDESGHLIRFLTLQEADSLIRQ 209
+LDE G LIR L+ EA +L+
Sbjct: 214 VLDEDGELIRELSPNEAQALLEA 236
|
Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 1e-59
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 281 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 340
G E RL L+AA CR GV R H++ G LL ELF RDG+GT ++ + +E
Sbjct: 230 GSETTRRL------LSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFE 283
Query: 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 400
R A + D+ GI +I+PL E G LVRR+ E L + + F ++E +G II CAAL+P+
Sbjct: 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA 343
Query: 401 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 460
+E CGE+A + VSPE + G+G++LL +IE +A +G+ LF+LTTRT WF+ RGF+
Sbjct: 344 EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWFRERGFQTA 403
Query: 461 SIEMIPEERRKRINLSRNSKYYMKKL 486
S++ +PE RRK N RNSK MK+L
Sbjct: 404 SVDELPEARRKLYNYQRNSKILMKRL 429
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 2e-42
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 20/222 (9%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+V DIA LH LG+R VLV G QI+++L+ RG Y R+TD SL A +AAG +
Sbjct: 37 IVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRVTDEASLEQAQQAAGTL 96
Query: 70 RMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 126
R+ IEA+LS P+ R + V SGNF+ A+ GV++GVDY TG
Sbjct: 97 RLAIEARLSMSLSNTPMAGSR------------LPVVSGNFVTARPIGVIEGVDYEHTGV 144
Query: 127 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIID 184
++K+D +R +LD G +V+LS LG+S +GE N + +VAT+ A++++ADKLI +
Sbjct: 145 IRKIDTEGIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSP 204
Query: 185 GPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAE 226
G I D G L L+ QE +SL + SE + A +
Sbjct: 205 G-ISDPDGTLAAELSPQEVESLAER--LGSETTRRLLSAAVK 243
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 4e-41
Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 19/204 (9%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-I 69
DIA L +GIR V+V G QID++L++ G E +++ R+TD+E+L GG +
Sbjct: 24 ASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEVVEMVLGGTV 83
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
I A+LS +HG + VG+S GN + AK+ V DGVD G GE++K
Sbjct: 84 NKEIVARLS---------KHGGQA----VGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRK 130
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPI 187
V+ + LD G + +++ + GE LN N A A A A++A+KLI + G +
Sbjct: 131 VNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPG-V 189
Query: 188 LDESGH--LIRFLTLQEADSLIRQ 209
LD+ G LI L +EA+ LI Q
Sbjct: 190 LDDKGDPSLISELDAEEAEELIEQ 213
|
Length = 265 |
| >gnl|CDD|224167 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 2e-38
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 342 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 401
R A+++D+ I ++I+PL G L+RR+ E+L + +D F ++ER+G++I CAAL P +
Sbjct: 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLE 62
Query: 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 461
E GE+ ++ V P+ RG G+G++LL+ + A LG+ LF+LTTR+ ++F RGF
Sbjct: 63 EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVD 122
Query: 462 IEMIPEERRKRINLS-RNSKYYMKKLL 487
+ +PEE N R SK LL
Sbjct: 123 KDELPEEVWSSYNFCERRSKCLAFDLL 149
|
Length = 153 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
DI L +GI V+V G +I++LL G E++++ R+TD E++ G
Sbjct: 21 DDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGLRVTDKETMEIVEMVLAGK-- 78
Query: 72 MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 131
+ +L + R G + VG+S G + A++K +D G GEV +V+
Sbjct: 79 -VNKELVS-----LLNRAGGKA----VGLSGKDGGLIKAEKK-EEKDIDLGFVGEVTEVN 127
Query: 132 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILD 189
+ L+ G + +++ + GE N N A A A A++A+KLI + + G +LD
Sbjct: 128 PELLETLLEAGYIPVIAPIAVDEDGETYNVNADTAAGAIAAALKAEKLILLTDVPG-VLD 186
Query: 190 ESGHLIRFLTLQEADSLIRQ 209
+ G LI LT +EA+ LI
Sbjct: 187 DPGSLISELTPKEAEELIED 206
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-24
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA-AAMEAAGGIR 70
+DI L +GI V+V G QID+LL + G E++++ R+TD+E++ M AG +
Sbjct: 46 RDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEFVNGLRVTDAETMEVVEMVLAGKVN 105
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
+ + I +HG + VG+S G + AK+ + D G GEV V
Sbjct: 106 KELVSL---------INKHGGKA----VGLSGKDGGLITAKKLE--EDEDLGFVGEVTPV 150
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
+ + L+ G + ++S +G GE N N A A A A+ A+KLI + D P +LD
Sbjct: 151 NPALLEALLEAGYIPVISPIGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLD 210
Query: 190 ESGHLIRFLTLQEADSLIRQRV 211
+ G LI LT EA+ LI V
Sbjct: 211 DKGQLISELTASEAEELIEDGV 232
|
Length = 283 |
| >gnl|CDD|233118 TIGR00761, argB, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 1e-22
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIR 70
DIAFL +GI+ V+V G +I++LL G ++ R+TD E+L M G +
Sbjct: 20 SDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLRVTDKETLEVVEMVLIGQVN 79
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
+ A L +HG ++ +G++ G A+ +D D G GE+KKV
Sbjct: 80 KELVALL---------NKHGINA----IGLTGGDGQLFTARY---LDKEDLGYVGEIKKV 123
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
+ + L G + ++S+L ++ G+ LN N A A A A+ A+KL+ + D P IL+
Sbjct: 124 NKALIEALLKAGYIPVISSLALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILN 183
Query: 190 ESG-HLIRFLTLQEADSLIRQRV 211
G LI + L E + LI+Q +
Sbjct: 184 GDGQSLISEIPLDEIEQLIKQGI 206
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model [Amino acid biosynthesis, Glutamate family]. Length = 231 |
| >gnl|CDD|236088 PRK07757, PRK07757, acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 89.1 bits (222), Expect = 6e-21
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
R A+++D+ I +I + G ++ R+ +EL + + FYV E EG+I+ C AL E
Sbjct: 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALH-ILWE 63
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462
E+ ++ VS + RGQG G L++ ++A LG+ +F LT + ++F+ GFRE
Sbjct: 64 DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTYQP-EFFEKLGFREVDK 122
Query: 463 EMIPE 467
E +P+
Sbjct: 123 EALPQ 127
|
Length = 152 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 86.0 bits (214), Expect = 8e-19
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 69
+DI L ++GI V+V G +I+++L + G E++++ R+TD E++ M G +
Sbjct: 36 ARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEFVNGLRVTDEETMEIVEMVLVGKV 95
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK---GVVDGVDYGATGE 126
I + I R G + VG+S GN + AK+K + + +D G GE
Sbjct: 96 NKEIVSL---------INRAGGKA----VGLSGKDGNLIKAKKKDATVIEEIIDLGFVGE 142
Query: 127 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 186
V +V+ + L+ G + +++ +G GE N N A A A A++A+KLI + D
Sbjct: 143 VTEVNPELLETLLEAGYIPVIAPVGVGEDGETYNINADTAAGAIAAALKAEKLILLTDVA 202
Query: 187 -ILDE---SGHLIRFLTLQEADSLIRQ 209
+LD+ G LI ++L+EA+ LI
Sbjct: 203 GVLDDPNDPGSLISEISLKEAEELIAD 229
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 8e-17
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 282 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
+ N L AA CR GV RVHL+ G LLLELF RDG+GT++
Sbjct: 228 ETGALLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 9e-17
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 324 LFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 383
L RD G V R A++TD+ I+ ++ G + R+ EL++ + SF V
Sbjct: 456 LAARDTSGVKV--------RPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAV 507
Query: 384 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443
E G++ CA+L+ + E+ ++GV + QGQG L+ Y+ +KA + + +F+
Sbjct: 508 AEHHGEVTGCASLY-IYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFV 566
Query: 444 LTTRTADWFKSRGFRECSIEMIPE 467
L TR ++F +GF S ++PE
Sbjct: 567 L-TRVPEFFMKQGFSPTSKSLLPE 589
|
Length = 614 |
| >gnl|CDD|239785 cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 1e-15
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 14 IAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMI 73
++FL H+G+ ++V G Q+++ L G E +Y+ R+TD E + A + +
Sbjct: 21 LSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRVTDPE----TLAVARKVFLEE 76
Query: 74 EAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 133
KL + + R+G +R + SG F A +D YG G++ V+
Sbjct: 77 NLKL-----VEALERNGARAR------PITSGVFEAE----YLDKDKYGLVGKITGVNKA 121
Query: 134 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESG 192
+ + G L IL++L + SG++LN N A A +E K++ + + G +LD +G
Sbjct: 122 PIEAAIRAGYLPILTSLAETPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTG 181
Query: 193 HLIRFLTL-QEADSLIRQ-------RVKQSEI 216
I + L +E D L++Q ++K EI
Sbjct: 182 KKISAINLDEEYDDLMKQPWVKYGTKLKIKEI 213
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 248 |
| >gnl|CDD|236132 PRK07922, PRK07922, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 1e-14
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 401
R A+ +D+ IK+++ P + L+ + L +A+ F+V E G+++ C AL +
Sbjct: 9 RRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW- 67
Query: 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 459
E E+ + V P RG+G G +++ + A LGL +F+LT ++F GF E
Sbjct: 68 EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTFEV-EFFARHGFVE 124
|
Length = 169 |
| >gnl|CDD|178128 PLN02512, PLN02512, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 2e-14
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 69
++D+ L +G+R VLV G +I+ L + G E ++ R+TD+E++ M G +
Sbjct: 69 IRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFKNGLRVTDAETMEVVEMVLVGKV 128
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
+ + I + G ++ VG+S G L A+ + D G GEV +
Sbjct: 129 NKSLVSL---------INKAGGTA----VGLSGKDGRLLRARPS--PNSADLGFVGEVTR 173
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 188
VD T +R +D G + +++ + G+ N N A A A+ A+KLI + D +L
Sbjct: 174 VDPTVLRPLVDDGHIPVIATVAADEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVL 233
Query: 189 ---DESGHLIRFLTLQEADSLI 207
D+ G L++ L ++ LI
Sbjct: 234 EDKDDPGSLVKELDIKGVRKLI 255
|
Length = 309 |
| >gnl|CDD|237599 PRK14058, PRK14058, acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL-------GRYRITDSESLAAAM 63
+ D+A L G R VLV G ++++LL G E +++ RY TD E+L +
Sbjct: 18 LIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRY--TDRETLEVFI 75
Query: 64 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV----DG- 118
A I + +L + G ++ VG+S G L KRK V +G
Sbjct: 76 MAMALINKQLVERL---------QSLGVNA----VGLSGLDGGLLEGKRKKAVRVVEEGK 122
Query: 119 ---VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIE 175
+ TG++++V+ ++ L G L +++ S GE LN + A A A A++
Sbjct: 123 KKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAPPALSEEGEPLNVDGDRAAAAIAGALK 182
Query: 176 ADKLICIIDGPIL----DESGHLIRFLTLQEADSL 206
A+ L+ + D P L + G LI +T +EA+ L
Sbjct: 183 AEALVLLSDVPGLLRDPPDEGSLIERITPEEAEEL 217
|
Length = 268 |
| >gnl|CDD|133644 CHL00202, argB, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 9e-12
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+++DI FL +G++ V+V G +I+ L + K+ R+TD + ME +
Sbjct: 44 IIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKFWNGIRVTDKVT----MEI---V 96
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
M++ K++ + +I +G + VG+ N + A+ D D G GE+++
Sbjct: 97 EMVLAGKVNK-DLVGSINANGGKA----VGLCGKDANLIVARAS---DKKDLGLVGEIQQ 148
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP--- 186
VD + L+ + +++++ G+ N N VA A + A+KLI + D P
Sbjct: 149 VDPQLIDMLLEKNYIPVIASVAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGIL 208
Query: 187 --ILDESGHLIRFLTLQEADSLIRQRV 211
I D + LI L ++EA +L +
Sbjct: 209 ADINDPNS-LISTLNIKEARNLASTGI 234
|
Length = 284 |
| >gnl|CDD|222185 pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 7e-11
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 379 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
+ F V +G+I+ L P + + + V PE RGQG G KLL ++ ++ LG
Sbjct: 3 EHFLVAYDDGEIVGFLRLRPI--GEGAYIGGVAVDPEYRGQGYGSKLLRHLLEE---LGE 57
Query: 439 DMLFLLTTRTA-DWFKSRGFRE 459
LFL A +++ GF
Sbjct: 58 KPLFLFAHPQAKKFYEKLGFEP 79
|
This domain catalyzes N-acetyltransferase reactions. Length = 79 |
| >gnl|CDD|239784 cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 8e-11
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG-----RYRITDSESLAAAMEAA 66
DIA + G R ++V G +++ L G E K++ R R TD E+L +
Sbjct: 18 DDIA---NFGERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVM 74
Query: 67 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV----DG---- 118
G I I A+L G + VG++ G L AKRK +V G
Sbjct: 75 GLINKKIVARL---------HSLGVKA----VGLTGLDGRLLEAKRKEIVRVNERGRKMI 121
Query: 119 VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADK 178
+ G TG+V+KV+ + LD G L ++S + YS GE LN + A A A A++A++
Sbjct: 122 IRGGYTGKVEKVNSDLIEALLDAGYLPVVSPVAYSEEGEPLNVDGDRAAAAIAAALKAER 181
Query: 179 LICIIDGPILDESGHLIRFLTLQEADSL---IRQRVKQSEIAANYVKAVAE 226
LI + D L G +I +T+ +A+SL +K+ +AA +AV
Sbjct: 182 LILLTDVEGLYLDGRVIERITVSDAESLLEKAGGGMKRKLLAA--AEAVEG 230
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). Length = 257 |
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 2e-10
Identities = 57/233 (24%), Positives = 85/233 (36%), Gaps = 34/233 (14%)
Query: 10 MVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+ + + L G R V+V G QI L G Y RITD E+ A A G
Sbjct: 18 LARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMS 77
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
++I A L +HG + L + G + G G++ K
Sbjct: 78 NLLIAAAL---------EQHGIKAVP------------LDLTQAGFASP-NQGHVGKITK 115
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSS---GEVLNCNTYEVATACALAIEADKLICI--ID 184
V R++ L+ G L ILS G + G + + A A A++AD+L+ + +D
Sbjct: 116 VSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSDSTAALLAAALKADRLVILTDVD 175
Query: 185 G-----PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCF 232
G P L+ LT +EA L + A A I
Sbjct: 176 GVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKA--ADPAARAGIPVR 226
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. Length = 248 |
| >gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 3e-10
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 384 VEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442
E +G+++ A+L + E+ + V PE RG+G G LL+ +E+ A LGL +
Sbjct: 1 AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIE 60
Query: 443 LLTT----RTADWFKSRGFR 458
L ++ GF+
Sbjct: 61 LEVLEDNEAAIALYEKLGFK 80
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80 |
| >gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 5e-10
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 381 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
F V E +G+I+ A+L P + + V PE RG+G G LL+ E++A G
Sbjct: 1 FLVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAK 60
Query: 440 MLFL 443
L L
Sbjct: 61 RLRL 64
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65 |
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 9e-09
Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 41/210 (19%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
++IA L LGI+ V+V G DKLL+ G EA ++ L + A +
Sbjct: 22 AEEIAKLLALGIKVVVVSGGGGFTDKLLAAYGIEAGFVRHTAGAT--GLVLEAQLAAELN 79
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
++ + R G V + ++ G A + V
Sbjct: 80 RIVVSLGE---------RLG----ARAVALLLSDGGLPAVRLDL---------------V 111
Query: 131 DVTRMRERLDGGCLVILSNLGYSS----SGEVLNCNTYEVATACALAIEADKLICI--ID 184
D ++E L+ G + +++ G + + + ++ +A A A+ ADKLI + +D
Sbjct: 112 DTEAIKELLEAGVVPVITGFGGENDTGETTTLGRGSSDTLAALLAEALGADKLIILTDVD 171
Query: 185 G-----PILDESGHLIRFLTLQEADSLIRQ 209
G P + LI L+ EA+ L+
Sbjct: 172 GVYTADPRKNPDAKLIPELSYDEAEELLAA 201
|
This family includes kinases that phosphorylate a variety of amino acid substrates, as well as uridylate kinase and carbamate kinase. This family includes: Aspartokinase EC:2.7.2.4, Acetylglutamate kinase EC:2.7.2.8, Glutamate 5-kinase EC:2.7.2.11, Uridylate kinase EC:2.7.4.-, Carbamate kinase EC:2.7.2.2. Length = 230 |
| >gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 98 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 157
VG+S+A G A + GA G+ D + + + L G L I+S++G G+
Sbjct: 96 VGLSLADGGMTAVT----QLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151
Query: 158 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 211
++N N + ATA A + AD L+ + D +LD LI L ++A LI Q V
Sbjct: 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV 205
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). Length = 252 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 274 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 333
EQG GG + AA GV+RVH++ G + LLLELF RDG+GTM
Sbjct: 212 EQGIITGGMIPK---------VEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTM 262
Query: 334 VA 335
+
Sbjct: 263 IV 264
|
Length = 265 |
| >gnl|CDD|235306 PRK04531, PRK04531, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 132 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDE 190
V + L G + ++++LG + SG++LN N A A++ K+I + G +LD
Sbjct: 119 VEAVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA 178
Query: 191 SGHLIRFLTLQ-EADSLIRQ 209
G LI + L E D L++Q
Sbjct: 179 DGKLISSINLSTEYDHLMQQ 198
|
Length = 398 |
| >gnl|CDD|223532 COG0456, RimI, Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 1e-05
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-----DWFKSRGFRE 459
G + + V PE RG+G G LLD ++ GL +L R + ++ GF
Sbjct: 92 GHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151
Query: 460 CSIEMIPEERRKRINLSRNSKYYMKKLL 487
I R+ M K+L
Sbjct: 152 VKI------RKNYYADGNGDALLMLKML 173
|
Length = 177 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (107), Expect = 5e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 337
+ AA R GV+ VH++DG + LLLELF +G+GTM+ D
Sbjct: 241 VEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283
|
Length = 283 |
| >gnl|CDD|222309 pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 7e-05
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 349 DLSGIKQIIQPLVES----------GALVRRTDEELLKALDS----FYVVEREGQIIACA 394
D+ + I +ES A R L + L +V ER G+I+ A
Sbjct: 1 DIPALAAIYNDAIESQPALYSPEQIAAWARLLPAVLAERLAEGSITGFVAERGGEIVGFA 60
Query: 395 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LTTRTADWFK 453
L P G + + V P RG+G G LLD IE +A G+ L + ++
Sbjct: 61 GLDPD-----GRLDLLYVRPRYRGRGIGRALLDAIEAEARK-GIKRLTTEASLLARPFYL 114
Query: 454 SRGF 457
GF
Sbjct: 115 RLGF 118
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 118 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 8e-05
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
AA + GV++VH++DG + LLLELF +G+GTM+
Sbjct: 218 EAALEAL-EGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
+ A GV+ H++DG + LLLE+F +G+GTM+
Sbjct: 240 VEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|222199 pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 343 RTAKVTDLSGIKQIIQP--LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF- 399
R DL ++++ VE L +G+++ AL+PF
Sbjct: 3 RPLTEDDLDEFLELLEYAFQVEDSPAEIWEYFRPLLEEGRVLGAFDDGKLVGQLALYPFR 62
Query: 400 -------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 452
+ G + + PE RG+G KLL + G + +L + +
Sbjct: 63 LNVPGKTYP--AGGITGVATYPEYRGRGLMRKLLRRALAEMRERGQPLSYLTPSSYP-IY 119
Query: 453 KSRGFREC 460
+ G+
Sbjct: 120 RRFGYEIA 127
|
This domain catalyzes N-acetyltransferase reactions. Length = 127 |
| >gnl|CDD|173920 cd02169, Citrate_lyase_ligase, Citrate lyase ligase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 387 EGQIIACAALFPFFKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 444
G++IA ++ KC + V P+ +G+G K++ + KA G+ LFL
Sbjct: 14 AGELIATGSIA---GNVLKC-----VAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLF 65
Query: 445 T-TRTADWFKSRGFRECSIEMIPEE----RRKRINLSRNSKYYMKKL 486
T + A +F+ GF+E + +E + + Y+K L
Sbjct: 66 TKPKNAKFFRGLGFKE--LANASDEAVLLENGKPGIED----YLKNL 106
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. Length = 297 |
| >gnl|CDD|233477 TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
+ + G+++ A + E + I V PE +GQG G LL + +A G++
Sbjct: 33 YLLARIGGKVVGYAGVQIVLDE--AHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNE 90
Query: 441 LFLLTTRTAD-----WFKSRGFRE 459
+F L R ++ +K GF E
Sbjct: 91 IF-LEVRVSNIAAQALYKKLGFNE 113
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database [Protein synthesis, Ribosomal proteins: synthesis and modification]. Length = 131 |
| >gnl|CDD|222116 pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 19/134 (14%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTD-------EELLKALDS-----FYVVEREGQI 390
R DL I ++ V + A+ D E L++ S F V E++G++
Sbjct: 2 RLLTEEDLEAILRLYSEYVHNTAITFEYDVPSEELFERFLESYLSENEYPFGVFEKDGEL 61
Query: 391 IACAALFPFFKEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLTTRT 448
I A L F + E+ + + +G G KLL+ + + A ++ +
Sbjct: 62 IGYATLRQFDAYRHKAEL-SFYFVKDNNDEGLGRKLLNALIEYAFKEQNIENILACIASN 120
Query: 449 ----ADWFKSRGFR 458
+ K GF
Sbjct: 121 NISAIVFLKKLGFE 134
|
Length = 154 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 500 | |||
| PLN02825 | 515 | amino-acid N-acetyltransferase | 100.0 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 100.0 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 100.0 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 100.0 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 100.0 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 100.0 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 100.0 | |
| PLN02512 | 309 | acetylglutamate kinase | 100.0 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 100.0 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 100.0 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 100.0 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 100.0 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 100.0 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 100.0 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 100.0 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 100.0 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 100.0 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 99.97 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 99.97 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 99.97 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.96 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.95 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.95 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.95 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 99.95 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 99.95 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.94 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.94 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.94 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.9 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.9 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.9 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.9 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.89 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.89 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.89 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 99.88 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.88 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.87 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.87 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 99.85 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.83 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.82 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.82 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.81 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.81 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.81 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 99.8 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.79 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.79 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.78 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.78 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.76 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.76 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.75 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.75 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.75 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.74 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 99.69 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.67 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 99.64 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 99.63 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 99.59 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 99.58 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 99.56 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 99.53 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 99.48 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 99.48 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 99.46 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 99.45 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 99.45 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 99.45 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 99.41 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 99.39 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 99.38 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 99.37 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 99.37 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 99.37 | |
| PRK08373 | 341 | aspartate kinase; Validated | 99.36 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 99.35 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 99.35 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 99.35 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 99.35 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 99.35 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 99.34 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 99.33 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 99.33 | |
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 99.32 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 99.3 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 99.29 | |
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 99.29 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 99.25 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 99.24 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.22 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 99.2 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.19 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 99.18 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 99.16 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 99.15 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 99.14 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 99.13 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 99.12 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 99.1 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 99.1 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 99.1 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 99.08 | |
| PHA01807 | 153 | hypothetical protein | 99.08 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.07 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 99.05 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 99.05 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.02 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 99.01 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 98.99 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 98.98 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 98.97 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 98.95 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 98.86 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 98.84 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 98.82 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 98.78 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 98.78 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 98.74 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 98.74 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 98.74 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 98.72 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 98.7 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 98.59 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 98.58 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 98.57 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 98.56 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 98.5 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 98.45 | |
| PLN02551 | 521 | aspartokinase | 98.42 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 98.41 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 98.38 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 98.36 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 98.27 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 98.22 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 98.22 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 98.19 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 98.1 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 98.07 | |
| PRK09181 | 475 | aspartate kinase; Validated | 97.93 | |
| cd04248 | 304 | AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S | 97.87 | |
| COG3818 | 167 | Predicted acetyltransferase, GNAT superfamily [Gen | 97.77 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 97.76 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 97.63 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 97.54 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 97.51 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 97.45 | |
| PF04768 | 170 | DUF619: Protein of unknown function (DUF619); Inte | 97.4 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 97.36 | |
| PF00765 | 182 | Autoind_synth: Autoinducer synthetase; InterPro: I | 97.27 | |
| PF04958 | 342 | AstA: Arginine N-succinyltransferase beta subunit; | 97.17 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 97.04 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 96.92 | |
| TIGR03694 | 241 | exosort_acyl putative PEP-CTERM/exosortase system- | 96.88 | |
| PRK13834 | 207 | putative autoinducer synthesis protein; Provisiona | 96.84 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.71 | |
| PRK10456 | 344 | arginine succinyltransferase; Provisional | 96.63 | |
| TIGR03245 | 336 | arg_AOST_alph arginine/ornithine succinyltransfera | 96.41 | |
| TIGR03244 | 336 | arg_catab_AstA arginine N-succinyltransferase. In | 96.4 | |
| TIGR03243 | 335 | arg_catab_AOST arginine and ornithine succinyltran | 96.38 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 96.27 | |
| COG5630 | 495 | ARG2 Acetylglutamate synthase [Amino acid transpor | 96.27 | |
| COG3916 | 209 | LasI N-acyl-L-homoserine lactone synthetase [Signa | 95.92 | |
| KOG4135 | 185 | consensus Predicted phosphoglucosamine acetyltrans | 95.76 | |
| COG5628 | 143 | Predicted acetyltransferase [General function pred | 95.17 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 94.76 | |
| COG3375 | 266 | Uncharacterized conserved protein [Function unknow | 94.53 | |
| COG1243 | 515 | ELP3 Histone acetyltransferase [Transcription / Ch | 93.74 | |
| PF01233 | 162 | NMT: Myristoyl-CoA:protein N-myristoyltransferase, | 93.07 | |
| PF13880 | 70 | Acetyltransf_13: ESCO1/2 acetyl-transferase | 92.34 | |
| COG3138 | 336 | AstA Arginine/ornithine N-succinyltransferase beta | 92.24 | |
| cd04264 | 99 | DUF619-NAGS DUF619 domain of various N-acetylgluta | 91.37 | |
| PF01853 | 188 | MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz i | 91.23 | |
| PF05301 | 120 | Mec-17: Touch receptor neuron protein Mec-17; Inte | 90.36 | |
| PF02799 | 190 | NMT_C: Myristoyl-CoA:protein N-myristoyltransferas | 90.08 | |
| KOG2036 | 1011 | consensus Predicted P-loop ATPase fused to an acet | 90.06 | |
| PF04377 | 128 | ATE_C: Arginine-tRNA-protein transferase, C termin | 89.91 | |
| KOG0456 | 559 | consensus Aspartate kinase [Amino acid transport a | 89.76 | |
| cd04265 | 99 | DUF619-NAGS-U DUF619 domain of various N-acetylglu | 89.54 | |
| TIGR03019 | 330 | pepcterm_femAB FemAB-related protein, PEP-CTERM sy | 89.19 | |
| KOG2779 | 421 | consensus N-myristoyl transferase [Lipid transport | 89.03 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 88.96 | |
| PTZ00064 | 552 | histone acetyltransferase; Provisional | 88.85 | |
| PLN03238 | 290 | probable histone acetyltransferase MYST; Provision | 87.52 | |
| PRK01305 | 240 | arginyl-tRNA-protein transferase; Provisional | 86.85 | |
| COG2401 | 593 | ABC-type ATPase fused to a predicted acetyltransfe | 86.7 | |
| KOG2535 | 554 | consensus RNA polymerase II elongator complex, sub | 86.5 | |
| PLN03239 | 351 | histone acetyltransferase; Provisional | 85.66 | |
| PHA01733 | 153 | hypothetical protein | 83.13 | |
| PLN00104 | 450 | MYST -like histone acetyltransferase; Provisional | 82.78 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 82.62 | |
| PF13444 | 101 | Acetyltransf_5: Acetyltransferase (GNAT) domain | 81.7 |
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-84 Score=687.69 Aligned_cols=480 Identities=79% Similarity=1.218 Sum_probs=437.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
|.++++||++|++.|+++||||||||||+.++++.|++++|++|+|+||+++|+++++++|.+|..|++.||+|++++.|
T Consensus 34 ~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~~G~RVTd~~~L~~~~~~~G~v~~~i~a~Ls~~~~v~~l 113 (515)
T PLN02825 34 LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRITDSAALQASMEAAGKIRVMIEAKLSPGPSIPNL 113 (515)
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceeeCCcccCCHHHHHHHHHHHHHHHHHHHHhhccccchhHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+++|+++|++.+++++.||+|++++|.|+++++|+||+|+|++||++.|+.+|++|+|||++|++++++|+.+|+|+|++
T Consensus 114 ~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L~~g~Ipvisplg~s~~Ge~~NinaD~v 193 (515)
T PLN02825 114 RRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEV 193 (515)
T ss_pred HhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHHhCCCeEEECCceECCCCCEEeeCHHHH
Confidence 99999988888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCC
Q 010815 167 ATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN 246 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (500)
|+++|.+|+|||||||||+++++.+|++|++++.+|++++++++..++.++|++.||+.+.+-+--.+-+..+..-.+-+
T Consensus 194 A~avA~aL~A~KLI~ltd~~~~~~~g~li~~l~~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (515)
T PLN02825 194 ATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNN 273 (515)
T ss_pred HHHHHHHcCCCeEEEEeCcceecCCCCCcCcCCHHHHHHHHHhhhhcchhhhhhhhhccccccccccccccccccccccc
Confidence 99999999999999999999888999999999999999999877778889999999999885332111110000000011
Q ss_pred CCccch--hhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehh
Q 010815 247 GKTFSE--RRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 324 (500)
Q Consensus 247 ~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l 324 (500)
++.+-. +....|.++++|+++.|+ +.+|+|++||++++++...++.||.+|+.||++||+|+||+|+..+++||.||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~el 352 (515)
T PLN02825 274 GRGFWGSGSATDSFQNGVGFDNGNGL-SGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLEL 352 (515)
T ss_pred cccccccccccccccccccccCcccc-cccccccccchhhchhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHh
Confidence 111111 233346777888876664 78899999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcceeecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCe
Q 010815 325 FKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKC 404 (500)
Q Consensus 325 ~~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~ 404 (500)
|+++|.||+|++++|+.||+++.+|++.|.+|+++....+....++.+.+..++..+++++.|++++||+.+.++.....
T Consensus 353 ft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~ 432 (515)
T PLN02825 353 FTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKC 432 (515)
T ss_pred hccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeecCCCc
Confidence 99999999999999999999999999999999999988888888899999999989999999999999999987776678
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEE
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~k 484 (500)
++|.+++|+|+|||+|+|++|+++++++|+++|++++++.++++.+||+|+||+..+...+|..++..|+++|+||+|||
T Consensus 433 aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt~a~~fY~k~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k 512 (515)
T PLN02825 433 GEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTTRTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMK 512 (515)
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcHHHHHHHCCCEEeChhhCCHHHHhhcCccCCcEEEEE
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred ecC
Q 010815 485 KLL 487 (500)
Q Consensus 485 kll 487 (500)
++.
T Consensus 513 ~l~ 515 (515)
T PLN02825 513 KLL 515 (515)
T ss_pred ecC
Confidence 873
|
|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-67 Score=557.87 Aligned_cols=395 Identities=43% Similarity=0.721 Sum_probs=360.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++||+.|+..|.++||||||||+++.+++++|+++++++|+|+|++++|+++.++++.+|..|++.|++
T Consensus 34 ~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~~G~RvT~~~~l~~~~~~~g~vn~~l~~~l~~------- 106 (429)
T TIGR01890 34 LGNIVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRVTDEASLEQAQQAAGTLRLAIEARLSM------- 106 (429)
T ss_pred HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceeeCCcccCCHHHHHHHHHHhChHHHHHHHHHHh-------
Confidence 5689999999999999999999999999999999999999999999999999999966799999999997643
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
++-..+.+.+++++.|++++.+++.++.+++|+|++|+|++||++.|+.+|++|+|||++|++++.+|+.+|+|+|++
T Consensus 107 --~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ipvi~pi~~~~~g~~~nvnaD~~ 184 (429)
T TIGR01890 107 --SLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDV 184 (429)
T ss_pred --cCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeEEECCcccCCCCCEEEeCHHHH
Confidence 311112335679999999999999987788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccC
Q 010815 167 ATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (500)
|++||.+|+|++|+|+|||||+. .+|++|++|+.+|+++++... .|
T Consensus 185 A~~lA~al~a~kli~ltdv~Gv~~~~g~~i~~i~~~~~~~l~~~~-------------------------------~~-- 231 (429)
T TIGR01890 185 ATSVAISLKADKLIYFTLSPGISDPDGTLAAELSPQEVESLAERL-------------------------------GS-- 231 (429)
T ss_pred HHHHHHHcCCCEEEEEeCCCcccCCCCCCcccCCHHHHHHHHHhc-------------------------------cC--
Confidence 99999999999999999999985 479999999999999987541 11
Q ss_pred CCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhh
Q 010815 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELF 325 (500)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~ 325 (500)
|| |.+||++|..|++.||+++||+||+.|++++.++|
T Consensus 232 -----------------------~~--------------------~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~ 268 (429)
T TIGR01890 232 -----------------------ET--------------------TRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELF 268 (429)
T ss_pred -----------------------CC--------------------cHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHh
Confidence 20 59999999999999999999999999999999999
Q ss_pred hcCCCcceeecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeE
Q 010815 326 KRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCG 405 (500)
Q Consensus 326 ~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~ 405 (500)
++++.||+|.+++|+.||+++.+|++.+.+++++....++..+++.+.+..++..+++++++++++||+.+.+..+...+
T Consensus 269 ~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~~~~ 348 (429)
T TIGR01890 269 TRDGIGTSISKEAFESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYAEEDCG 348 (429)
T ss_pred cCCCCcceEeccchhheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCCCCeE
Confidence 99999999999999999999999999999999887777776677788888888888889999999999999876656678
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEe
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 485 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kk 485 (500)
++..++|+|+|||+|+|++||++++++|+++|++.+++.++.+.+||+|+||+.++...+|..++..|+++|++++||++
T Consensus 349 ~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~~a~~fY~k~GF~~~g~~~l~~~~~~~~~~~r~~~~~~~~ 428 (429)
T TIGR01890 349 EMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWFRERGFQTASVDELPEARRKLYNYQRNSKILMKR 428 (429)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeecchHHHHHHCCCEECChhhCCHHHHHHhcccccCceeeec
Confidence 99999999999999999999999999999999999887777789999999999999999999999999999999999997
Q ss_pred c
Q 010815 486 L 486 (500)
Q Consensus 486 l 486 (500)
+
T Consensus 429 ~ 429 (429)
T TIGR01890 429 L 429 (429)
T ss_pred C
Confidence 5
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate. |
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=543.15 Aligned_cols=398 Identities=46% Similarity=0.737 Sum_probs=358.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++||+.|...|.++||||||||+++.++.++|+++++++|+|+|++++++++.++.+.+|..|+++|++
T Consensus 42 ~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G~RvT~~~~l~~~~~~~g~v~~~l~~~l~~------- 114 (441)
T PRK05279 42 FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKGLRVTDAAALECVKQAAGELRLDIEARLSM------- 114 (441)
T ss_pred HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCceecCCcccCCHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 4689999999999999999999999999999999999999999999999999999966679999999997643
Q ss_pred hhcCCCC-CccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~-~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|++. +++..++++.+++++.+++.++.++.|+|++|+++.+|.+.|+.||++|+|||++|++.++.|+.+|+|+|+
T Consensus 115 ---g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ipV~~~i~~~~~g~~~ni~~D~ 191 (441)
T PRK05279 115 ---GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEE 191 (441)
T ss_pred ---cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCeEEECCceECCCCCEEEECHHH
Confidence 4431 112445788899999999998878899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
+|++||.+|+|++|+|+|||||+. +++++|++++.+++++++..-. . +.+
T Consensus 192 ~a~~lA~~l~a~~lv~ltdv~GV~~~~~~~i~~i~~~~~~~~~~~~~-~-------------------------~~~--- 242 (441)
T PRK05279 192 VATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLEALE-D-------------------------GDY--- 242 (441)
T ss_pred HHHHHHHHcCCCEEEEEECCCCccCCCCchhhhCCHHHHHHHHhhhh-c-------------------------CCC---
Confidence 999999999999999999999985 5799999999999988874210 0 001
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehh
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 324 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l 324 (500)
+|| |.+||++|..++++|++++||+|++.|++++.++
T Consensus 243 ----------------------------------~gg---------M~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l 279 (441)
T PRK05279 243 ----------------------------------NSG---------TARFLRAAVKACRGGVRRSHLISYAEDGALLQEL 279 (441)
T ss_pred ----------------------------------Ccc---------HHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHH
Confidence 223 9999999999999999999999999999999999
Q ss_pred hhcCCCcceeecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCe
Q 010815 325 FKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKC 404 (500)
Q Consensus 325 ~~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~ 404 (500)
|+.++.||+|+++.|+.||+++.+|++.+.+++.+.....+..+++.+.+..+...+++++++++++||+.+.+......
T Consensus 280 ~~~~g~GT~i~~~~y~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~~~~ 359 (441)
T PRK05279 280 FTRDGIGTMIVMESLEQLRRATIDDVGGILELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKM 359 (441)
T ss_pred hcCCCCceEEecCchHHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcccCcEEEEEECCEEEEEEEEEEcCCCCe
Confidence 99999999999999999999999999999999987766666667777788877788899999999999998886554567
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEE
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~k 484 (500)
++|..++|+|+|||+|+|++|+++++++|+++|++.+++.++++.+||+|+||+..+...+|..++..|+++|+|++|++
T Consensus 360 ~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~~a~~fY~k~GF~~~g~~~~~~~~~~~y~~~r~~~~~~~ 439 (441)
T PRK05279 360 GEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVDDLPEAKRQLYNYQRRSKVLVK 439 (441)
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecchHHHHHHHCcCEECChhhCcHHHHHhhCcccCceeeee
Confidence 89999999999999999999999999999999999998887789999999999999999999999999999999999999
Q ss_pred ec
Q 010815 485 KL 486 (500)
Q Consensus 485 kl 486 (500)
++
T Consensus 440 ~~ 441 (441)
T PRK05279 440 DL 441 (441)
T ss_pred cC
Confidence 75
|
|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-51 Score=396.82 Aligned_cols=242 Identities=38% Similarity=0.602 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||++|+..|.++|||||||||++.+++++|++++|++|+|+||+++|+++ |+++|.+|+.|++.
T Consensus 20 ~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~~glRvTd~~tlevv~mvl~G~vNk~iva~--------- 90 (265)
T COG0548 20 LEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEVVEMVLGGTVNKEIVAR--------- 90 (265)
T ss_pred HHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeeeCCEEcCCHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 78999999999999999999999999999999999999999999999999999999 77888999999994
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|.+ ++++++.||+++++++.++..++|+||+|+|++||++.|+.+|++|+|||++|++++.+|+.+|+|+|+
T Consensus 91 l~~~g~~----avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpViapia~~~~G~~~NvnaD~ 166 (265)
T COG0548 91 LSKHGGQ----AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADT 166 (265)
T ss_pred HHHhCCc----ceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEEecceECCCCcEEeeCHHH
Confidence 6788876 999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC-CCc--cccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE-SGH--LIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~-~g~--~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
+|+++|.+|+|+||+||||++|+.. .++ +|+.++.+++++++.++. ++
T Consensus 167 ~A~~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~-----------------------------i~ 217 (265)
T COG0548 167 AAGALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGI-----------------------------IT 217 (265)
T ss_pred HHHHHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCC-----------------------------cc
Confidence 9999999999999999999999854 344 999999999999987653 22
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeee
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLL 322 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~ 322 (500)
| | |.+||++|+.||++||+++||+|++.|+.++.
T Consensus 218 ~-------------------------G---------------------Mi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~ 251 (265)
T COG0548 218 G-------------------------G---------------------MIPKVEAALEALESGVRRVHIISGRVPHSLLL 251 (265)
T ss_pred C-------------------------c---------------------cHHHHHHHHHHHHhCCCeEEEecCCCcchHHH
Confidence 2 4 99999999999999999999999999999999
Q ss_pred hhhhcCCCcceeec
Q 010815 323 ELFKRDGMGTMVAS 336 (500)
Q Consensus 323 ~l~~~~~~GT~i~~ 336 (500)
++|++.+.||+|.+
T Consensus 252 eLFt~~giGT~i~~ 265 (265)
T COG0548 252 ELFTRDGIGTMIVR 265 (265)
T ss_pred HHhcCCCcceEecC
Confidence 99999999999863
|
|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=353.77 Aligned_cols=244 Identities=50% Similarity=0.748 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++||+.|.+.|.++|||||||||++.++.++++++++++|+|+|++++|+++.++++.+|+.|++.|++
T Consensus 35 l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~~~G~RvT~~~~l~~~~~~~g~v~~~l~~~l~~------- 107 (280)
T cd04237 35 FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLRITDAAALECVKEAAGAVRLEIEALLSM------- 107 (280)
T ss_pred HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccccCCcCcCCHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 4689999999999999999999999999999999999999999999999999999966689999999997643
Q ss_pred hhcCCC-CCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDS-SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~-~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|++ .+++..++++.+++++.+++.+++++.|+|++|.++.+|.+.|+.||++|+|||++|++.+++|+.+|+|+|+
T Consensus 108 ---~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~~g~~~~g~~lnvnaD~ 184 (280)
T cd04237 108 ---GLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMED 184 (280)
T ss_pred ---hccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECCceECCCCCEEeeCHHH
Confidence 333 1122457888899999999998888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
+|++||.+|+|++|+|+|||||+. .++++|++++.+|+++++..+.
T Consensus 185 ~A~~LA~~L~a~klv~ltdv~GV~~~~~~~i~~i~~~e~~~l~~~~~--------------------------------- 231 (280)
T cd04237 185 VATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETGA--------------------------------- 231 (280)
T ss_pred HHHHHHHHcCCCEEEEEeCCCcccCCCCCccccCCHHHHHHHHHcCC---------------------------------
Confidence 999999999999999999999986 4799999999999999986532
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehh
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 324 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l 324 (500)
+.+|| |.+||++|..|+++||+++||+|++.|++++.|+
T Consensus 232 --------------------------------~~~gg---------M~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~el 270 (280)
T cd04237 232 --------------------------------LLTND---------TARLLQAAIEACRGGVPRVHLISYAEDGALLLEL 270 (280)
T ss_pred --------------------------------CCCCC---------HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHH
Confidence 01223 9999999999999999999999999999999999
Q ss_pred hhcCCCccee
Q 010815 325 FKRDGMGTMV 334 (500)
Q Consensus 325 ~~~~~~GT~i 334 (500)
|++++.||+|
T Consensus 271 ft~~g~GT~i 280 (280)
T cd04237 271 FTRDGVGTLI 280 (280)
T ss_pred hcCCCCCCcC
Confidence 9999999986
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=351.90 Aligned_cols=238 Identities=26% Similarity=0.454 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
..++++||+.|+..|.++|||||||||+|++++++|+++++++|+|+|++++|+++ +++++.+|..|++ .
T Consensus 41 ~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G~rvT~~~~l~~~~~~l~g~ln~~lv~---------~ 111 (284)
T CHL00202 41 KADIIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKFWNGIRVTDKVTMEIVEMVLAGKVNKDLVG---------S 111 (284)
T ss_pred HHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHCCCCCEeECCcccCCHHHHHHHHHHHhhHHHHHHHH---------H
Confidence 45899999999999999999999999999999999999999999999999999999 7788999999999 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.|++++++++. ++.|++++|+++++|.+.|+.+|++|+|||++|++++..|+.+|+|+|+
T Consensus 112 L~~~Gv~----av~l~~~d~~~i~a~~~---~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~~~~~~~g~~~ni~~D~ 184 (284)
T CHL00202 112 INANGGK----AVGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAADHDGQTYNINADV 184 (284)
T ss_pred HHhCCCC----eeeeeeccCCEEEEEeC---CCcccccceeEEecCHHHHHHHHHCCCEEEECCCccCCCCcEEecCHHH
Confidence 6788988 99999999999999974 4578999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSV 241 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (500)
+|++||.+|+||+|+|+|||||+.. ++++|++++.+|+++++..+. +
T Consensus 185 ~A~~lA~~l~Ad~li~lTdv~Gv~~~~~d~~~~i~~i~~~e~~~l~~~g~-----------------------------~ 235 (284)
T CHL00202 185 VAGEIAAKLNAEKLILLTDTPGILADINDPNSLISTLNIKEARNLASTGI-----------------------------I 235 (284)
T ss_pred HHHHHHHHhCCCEEEEEeCChhhcCCCCCCCCccccccHHHHHHHHhcCC-----------------------------C
Confidence 9999999999999999999999853 378999999999888863221 1
Q ss_pred cccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceee
Q 010815 242 YSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll 321 (500)
+| | |.+||++|..|+++|++++||+||+.|++++
T Consensus 236 ------------------------tG-G---------------------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll 269 (284)
T CHL00202 236 ------------------------SG-G---------------------MIPKVNCCIRALAQGVEAAHIIDGKEKHALL 269 (284)
T ss_pred ------------------------CC-C---------------------HHHHHHHHHHHHHcCCCEEEEeCCCCCChHH
Confidence 22 3 9999999999999999999999999999888
Q ss_pred ehhhhcCCCcceee
Q 010815 322 LELFKRDGMGTMVA 335 (500)
Q Consensus 322 ~~l~~~~~~GT~i~ 335 (500)
.++|++++.||+|.
T Consensus 270 ~el~~~~g~GT~i~ 283 (284)
T CHL00202 270 LEILTEKGIGSMLV 283 (284)
T ss_pred HHHhcCCCCceEEe
Confidence 99999999999985
|
|
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=327.90 Aligned_cols=232 Identities=25% Similarity=0.361 Sum_probs=204.6
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
++.++++||+.|++.|.++|||||||+|+|++++++|++++|++|+|+|++++|+.++++++.+|..+++ .
T Consensus 13 ~l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~g~RvT~~~~l~~v~~al~~vn~~iv~---------~ 83 (248)
T cd04252 13 DLDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRVTDPETLAVARKVFLEENLKLVE---------A 83 (248)
T ss_pred cHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCcEeeCCcccCCHHHHHHHHHHHHHHHHHHHH---------H
Confidence 4789999999999999999999999999999999999999999999999999999997777899999999 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|.++|++ ++++++ +++.+++ +++.|+||+|+++++|.+.|+.+|+.|+|||++|++++++|+.+|+|+|+
T Consensus 84 l~~~g~~----a~~l~~---~~~~a~~---~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p~~~~~~g~~~nvnaD~ 153 (248)
T cd04252 84 LERNGAR----ARPITS---GVFEAEY---LDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAETPSGQLLNVNADV 153 (248)
T ss_pred HHhCCCC----cccccC---ceEEEEE---CcCccCCccCceeeECHHHHHHHHHCCCeEEECCceECCCCCEEEECHHH
Confidence 6788888 788774 3567776 46789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHH-HHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
+|++||.+|+|++|+|+||+||+. .++++|++++.. +.++++..+ | ++|
T Consensus 154 ~A~~lA~aL~a~kli~ltdv~GV~~~~g~~i~~i~~~~~~~~l~~~~----~-------------------------vtg 204 (248)
T cd04252 154 AAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQP----W-------------------------VKY 204 (248)
T ss_pred HHHHHHHHcCCCeEEEEECCcccCCCCCCcccccCHHHHHHHHHHcC----C-------------------------cCC
Confidence 999999999999999999999985 459999999974 677776432 1 222
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHc--CCCeEEeeccccCceee
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR--GVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~ll 321 (500)
| |.+||++|..+.+. ++..+||++ +++++
T Consensus 205 -------------------------G---------------------M~~Kl~~~~~~~~~~~~~~~v~i~~---~~~ll 235 (248)
T cd04252 205 -------------------------G---------------------TKLKIKEIKELLDTLPRSSSVSITS---PDDLQ 235 (248)
T ss_pred -------------------------c---------------------hHHHHHHHHHHHHhCCCceEEEEEC---CchHH
Confidence 4 99999988887776 566788877 68899
Q ss_pred ehhhhcCCCccee
Q 010815 322 LELFKRDGMGTMV 334 (500)
Q Consensus 322 ~~l~~~~~~GT~i 334 (500)
.++|++++.||+|
T Consensus 236 ~elf~~~g~GT~i 248 (248)
T cd04252 236 KELFTHSGAGTLI 248 (248)
T ss_pred HHHhcCCCCCccC
Confidence 9999999999986
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th |
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=334.08 Aligned_cols=239 Identities=28% Similarity=0.489 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhh
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
.++++||+.|+..|.++|||||||+++|++++++++++++++|+|+|++++++++ +.+++.+|..|++ .|
T Consensus 66 ~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~~gi~~~~~~G~rvT~~~~lei~~~~l~g~ln~~lv~---------~L 136 (309)
T PLN02512 66 AGVIRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFKNGLRVTDAETMEVVEMVLVGKVNKSLVS---------LI 136 (309)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCCcCCCCCcCCCHHHHHHHHHHHhhHHHHHHHH---------HH
Confidence 4699999999999999999999999999999999999999999999999999999 7778999999999 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+++|++ ++++++.|++++++++.+ ++++++++|++.+++.+.|+.+|++|+|||++|+++++.|+.+++|+|++
T Consensus 137 ~~~Gv~----av~l~g~d~~~i~a~~~~--~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~~~~d~~g~~~~i~~D~~ 210 (309)
T PLN02512 137 NKAGGT----AVGLSGKDGRLLRARPSP--NSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQAYNINADTA 210 (309)
T ss_pred HHcCCC----eEEeehhhCCEEEEEEcC--cCccccccceeeecCHHHHHHHHhCCCEEEEeCceECCCCCEeccCHHHH
Confidence 899998 999999999999999863 44689999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC----CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 167 ATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~----~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
|+.||.+|+||+|+|+|||||+. +++++|++++.+|+++++..+. +
T Consensus 211 A~~lA~~L~Ad~li~lTdV~GV~~~~~~~~~lI~~i~~~e~~~l~~~~~-----------------------------v- 260 (309)
T PLN02512 211 AGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLIADGK-----------------------------I- 260 (309)
T ss_pred HHHHHHHcCCCEEEEEeCCcceeCCCCCCcCCCcccCHHHHHHHHhCCC-----------------------------C-
Confidence 99999999999999999999985 3589999999999888864321 1
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeee
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLL 322 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~ 322 (500)
+| | |.+||++|..++++|++++||+||+.|++++.
T Consensus 261 -----------------------tG-G---------------------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~ 295 (309)
T PLN02512 261 -----------------------AG-G---------------------MIPKVECCVRSLAQGVKTAHIIDGRVPHSLLL 295 (309)
T ss_pred -----------------------CC-c---------------------HHHHHHHHHHHHHcCCCEEEEecCCCCChHHH
Confidence 22 3 99999999999999999999999999998888
Q ss_pred hhhhcCCCcceeec
Q 010815 323 ELFKRDGMGTMVAS 336 (500)
Q Consensus 323 ~l~~~~~~GT~i~~ 336 (500)
++|++++.||+|.+
T Consensus 296 ~l~~~~~~GT~I~~ 309 (309)
T PLN02512 296 EILTDEGAGTMITG 309 (309)
T ss_pred HHhcCCCCeeEEeC
Confidence 99998999999863
|
|
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=317.53 Aligned_cols=239 Identities=32% Similarity=0.521 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHH-hHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA-GGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~-~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||+.|+..|.++|||||+|+++|++++++++..++.+++|+|++++++.+.+++ +++|..|++ +
T Consensus 16 ~~~~~~~i~~l~~~g~~~VlVhG~g~~~~~~~~~~~~~~~~~~~~r~t~~~~l~~~~~a~~g~ln~~i~~---------~ 86 (256)
T cd04238 16 KEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGLRVTDKETMEIVEMVLAGKVNKELVS---------L 86 (256)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcHHHHHHHHHCCCCCEeECCeecCCHHHHHHHHHHHcCchHHHHHH---------H
Confidence 578999999999999999999999999999999999999999999999999999996666 999999988 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.+++++++++.+ ++++|++|+|++..++.+.|+.+|++|+|||++|++++..|+.+++|+|+
T Consensus 87 L~~~Gv~----a~~l~~~~~~~~~~~~~~-~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~~~~~~~g~~~~~~~D~ 161 (256)
T cd04238 87 LNRAGGK----AVGLSGKDGGLIKAEKKE-EKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGETYNVNADT 161 (256)
T ss_pred HHhCCCC----CCCcccccCCEEEEEECC-CCCCCcccccceEEECHHHHHHHHHCCCEEEECCcEECCCCcEEEECHHH
Confidence 7789988 999999999999999998 88899999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC-CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~-~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
+|+.||.+|+||+|+|+|||+|++. ++++|++++.+|+++++..+
T Consensus 162 ~A~~lA~~l~a~~li~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~~---------------------------------- 207 (256)
T cd04238 162 AAGAIAAALKAEKLILLTDVPGVLDDPGSLISELTPKEAEELIEDG---------------------------------- 207 (256)
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCCCCccccCCHHHHHHHHHcC----------------------------------
Confidence 9999999999999999999999865 48999999998888876321
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehh
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 324 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l 324 (500)
+.+|| |.+|+++|..++++|+.++||+|++.|++|+.++
T Consensus 208 --------------------------------~~~gg---------m~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l 246 (256)
T cd04238 208 --------------------------------VISGG---------MIPKVEAALEALEGGVRKVHIIDGRVPHSLLLEL 246 (256)
T ss_pred --------------------------------CCCCC---------hHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHH
Confidence 11223 9999999999999999999999999999999999
Q ss_pred hhcCCCccee
Q 010815 325 FKRDGMGTMV 334 (500)
Q Consensus 325 ~~~~~~GT~i 334 (500)
+++++.||.|
T Consensus 247 ~~~~~~GT~i 256 (256)
T cd04238 247 FTDEGIGTMI 256 (256)
T ss_pred hcCCCCCCCC
Confidence 8878899986
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=319.67 Aligned_cols=241 Identities=36% Similarity=0.570 Sum_probs=219.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|.++|||||+|++++.+++++++.+++.+|+|+|+++++++. +.+++.+|..+++ +
T Consensus 41 ~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~~g~~~~~~~g~~~t~~~~l~~~~~a~~G~l~~~i~~---------~ 111 (283)
T PRK00942 41 KEAFARDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEFVNGLRVTDAETMEVVEMVLAGKVNKELVS---------L 111 (283)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHHHCCCCcEeeCCEecCCHHHHHHHHHHHcCchHHHHHH---------H
Confidence 46799999999999999999999999999999999999999999999999999998 5555899999998 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.|++++++++. .+++|++++|.++.+|.+.|+.+|++|+|||++|++++.+|+.+|+|+|+
T Consensus 112 L~~~Gv~----a~~l~~~~~~~~ta~~~--~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~~~~~~~g~~~~l~~D~ 185 (283)
T PRK00942 112 INKHGGK----AVGLSGKDGGLITAKKL--EEDEDLGFVGEVTPVNPALLEALLEAGYIPVISPIGVGEDGETYNINADT 185 (283)
T ss_pred HHhCCCC----ccceeeccCCEEEEEEC--CCCCCCccccceEEECHHHHHHHHHCCCEEEEcCcEECCCCcEEEECHHH
Confidence 7789988 89999999999999986 67789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC-CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~-~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
+|+.||.+|+|++|+|+|||||+.. ++++|++++.+|++++...+. +
T Consensus 186 ~A~~lA~~l~A~~li~~tdv~Gv~~~~~~~i~~i~~~e~~~~~~~~~-----------------------------~--- 233 (283)
T PRK00942 186 AAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIEDGV-----------------------------I--- 233 (283)
T ss_pred HHHHHHHHcCCCEEEEEECCcccccCCCcccccCCHHHHHHHHHcCC-----------------------------C---
Confidence 9999999999999999999999865 599999999999988864321 1
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehh
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 324 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l 324 (500)
+| | |.+||++|..++++|+.++||+|++.|+++|.++
T Consensus 234 ---------------------tg-g---------------------m~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~ 270 (283)
T PRK00942 234 ---------------------TG-G---------------------MIPKVEAALDAARGGVRSVHIIDGRVPHALLLEL 270 (283)
T ss_pred ---------------------CC-c---------------------hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHH
Confidence 22 3 9999999999999999999999999999878999
Q ss_pred hhcCCCcceeecc
Q 010815 325 FKRDGMGTMVASD 337 (500)
Q Consensus 325 ~~~~~~GT~i~~d 337 (500)
|++++.||.|.++
T Consensus 271 ~~~~~~GT~i~~~ 283 (283)
T PRK00942 271 FTDEGIGTMIVPD 283 (283)
T ss_pred hcCCCcceEEecC
Confidence 9999999999864
|
|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=319.01 Aligned_cols=240 Identities=32% Similarity=0.529 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
..+++++|+.|+..|.++|||||+|++++.+++++++++++.+|+|+|++.+++++ +.+++++|..|++ .
T Consensus 32 ~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~~g~~~~~~~g~r~t~~~~~~~~~~~~~g~ln~~l~~---------~ 102 (279)
T cd04250 32 KESFARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEFVNGLRVTDEETMEIVEMVLVGKVNKEIVS---------L 102 (279)
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHCCCCCEeECCeecCCHHHHHHHHHHHcCchHHHHHH---------H
Confidence 45899999999999999999999999999999999999999999999999999998 4444899999988 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCc---cCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecC
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCN 162 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~---~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~ 162 (500)
|+++|++ ++++++.|++++++++.+. ++++|++++|+++.++++.|+.+|++|+|||++|++.++.|+.+++|
T Consensus 103 L~~~Gv~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IPVi~~~~~~~~g~~~~~~ 178 (279)
T cd04250 103 INRAGGK----AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVGVGEDGETYNIN 178 (279)
T ss_pred HHHcCCC----cceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeEEEcCCccCCCCcEEEeC
Confidence 7889998 9999999999999999886 68899999999999999999999999999999999888889999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 163 TYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 163 ~D~~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|.+|+.||.+|+||+|+|+|||||+.. ++++|++++.+|++++...+.
T Consensus 179 ~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~~~--------------------------- 231 (279)
T cd04250 179 ADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIADGI--------------------------- 231 (279)
T ss_pred HHHHHHHHHHHhCCCEEEEEECCcccccCCCCCccccccCCHHHHHHHHHcCC---------------------------
Confidence 9999999999999999999999999853 389999999999888764311
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
+ +| | |.+|+++|..++++|++++||+|++.|+
T Consensus 232 --~------------------------tG-g---------------------m~~Kl~~a~~a~~~g~~~v~I~~g~~~~ 263 (279)
T cd04250 232 --I------------------------SG-G---------------------MIPKVEACIEALEGGVKAAHIIDGRVPH 263 (279)
T ss_pred --C------------------------CC-c---------------------hHHHHHHHHHHHHhCCCEEEEeCCCCCc
Confidence 1 22 3 9999999999999999999999999999
Q ss_pred eeeehhhhcCCCccee
Q 010815 319 VLLLELFKRDGMGTMV 334 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i 334 (500)
+++.++|++++.||+|
T Consensus 264 ~ll~~~~~~~~~GT~i 279 (279)
T cd04250 264 SLLLEIFTDEGIGTMI 279 (279)
T ss_pred hHHHHHhcCCCCccCC
Confidence 9999999999999986
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A |
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=313.53 Aligned_cols=232 Identities=32% Similarity=0.431 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeC---C--ccCCCHHHHHHHHHHHhHHHHHHHHhhCCCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAAGGIRMMIEAKLSPGP 81 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~---g--~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~ 81 (500)
+.++++||+.| |.++|||||||||+|..++++++++++++ | .|+|++++|++++++++.+|..|++
T Consensus 13 ~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~G~~~Rvt~~~~l~~~~~a~~~ln~~iv~------ 83 (257)
T cd04251 13 LDKVIDDIANF---GERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVMGLINKKIVA------ 83 (257)
T ss_pred hHHHHHHHHHc---CCCEEEECCCHHHHHHHHHHcCCCcEEEeCCCCCccccCCHHHHHHHHHHHHHHHHHHHH------
Confidence 46899999988 89999999999999999999999999985 7 4999999999997777999999999
Q ss_pred CchhhhhcCCCCCccccceeeccccEEEEEEc--------CccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccC
Q 010815 82 PICNIRRHGDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 153 (500)
Q Consensus 82 ~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~--------~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~ 153 (500)
.|+++|++ ++++++.+.+++++++. +.....|++|+|+++++|.+.|+.+|++|+|||++|++++
T Consensus 84 ---~L~~~Gi~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll~~g~vpVi~~~~~~ 156 (257)
T cd04251 84 ---RLHSLGVK----AVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSPVAYS 156 (257)
T ss_pred ---HHHhCCCC----ceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHHhCCCeEEEeCcEEC
Confidence 46788988 99999999999998875 3334568999999999999999999999999999999999
Q ss_pred CCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccC
Q 010815 154 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFG 233 (500)
Q Consensus 154 ~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (500)
.+|+.+|+|+|.+|++||.+|+||+|+|+|||||+..++++|++++.+|+++++.. +
T Consensus 157 ~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~~~~i~~i~~~e~~~l~~~------~----------------- 213 (257)
T cd04251 157 EEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK------A----------------- 213 (257)
T ss_pred CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeCCcccCccCHHHHHHHHhh------C-----------------
Confidence 89999999999999999999999999999999999878999999999998888621 1
Q ss_pred CCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeec
Q 010815 234 HSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLD 313 (500)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (500)
+| | |.+||++|..++++|++++||+|
T Consensus 214 --------------------------------~g-g---------------------m~~Kl~aa~~a~~~gv~~v~i~~ 239 (257)
T cd04251 214 --------------------------------GG-G---------------------MKRKLLAAAEAVEGGVREVVIGD 239 (257)
T ss_pred --------------------------------CC-c---------------------hHHHHHHHHHHHHcCCCEEEEec
Confidence 22 4 99999999999999999999999
Q ss_pred cccCceeeehhhhcCCCccee
Q 010815 314 GTIGGVLLLELFKRDGMGTMV 334 (500)
Q Consensus 314 ~~~~~~ll~~l~~~~~~GT~i 334 (500)
|+.|+++. .++. +.||.|
T Consensus 240 g~~~~~l~-~~l~--g~gT~i 257 (257)
T cd04251 240 ARADSPIS-SALN--GGGTVI 257 (257)
T ss_pred CCCccHHH-HHHc--CCCcCC
Confidence 99998754 4443 358875
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). |
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=313.15 Aligned_cols=236 Identities=30% Similarity=0.405 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeC---C--ccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCC
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAAGGIRMMIEAKLSPGPP 82 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~---g--~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~ 82 (500)
.+++.||+.++..|.++|||||||+|+|++++++++++++++ | +|+|++++|+.++++++++|..|++
T Consensus 15 ~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~g~~~rvt~~~~l~~~~~a~~~ln~~lv~------- 87 (268)
T PRK14058 15 EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRYTDRETLEVFIMAMALINKQLVE------- 87 (268)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHHcCCCceEEeCCCCCceEeCCHHHHHHHHHHHHHHHHHHHH-------
Confidence 578999999999999999999999999999999999999998 6 8999999999997777799999998
Q ss_pred chhhhhcCCCCCccccceeeccccEEEEEEcC----ccCC----cccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCC
Q 010815 83 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG----VVDG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 154 (500)
Q Consensus 83 ~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~----~~~~----~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~ 154 (500)
+|+++|++ ++++++.+.+++++++.. ..++ .|++|+|+++.++.+.|+.+|++|+|||++|++++.
T Consensus 88 --~L~~~Gv~----a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~~g~iPVi~~~~~~~ 161 (268)
T PRK14058 88 --RLQSLGVN----AVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAPPALSE 161 (268)
T ss_pred --HHHhCCCC----ccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHHCCCEEEEeCceECC
Confidence 46788988 999999999998887643 2333 689999999999999999999999999999998887
Q ss_pred CCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC----CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhccccc
Q 010815 155 SGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDIT 230 (500)
Q Consensus 155 ~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~----~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
.|+.+|+|+|.+|+.||.+|+||+|+|+|||||++ +++++|++++.+|++++...
T Consensus 162 ~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~--------------------- 220 (268)
T PRK14058 162 EGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSKA--------------------- 220 (268)
T ss_pred CCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCCCCcCccCcCHHHHHHHhhc---------------------
Confidence 88999999999999999999999999999999985 24889999998888776421
Q ss_pred ccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEE
Q 010815 231 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 310 (500)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 310 (500)
+ +| | |.+||++|..|+++|++++|
T Consensus 221 ----------~------------------------tG-g---------------------M~~Kl~aa~~a~~~Gv~~v~ 244 (268)
T PRK14058 221 ----------A------------------------GG-G---------------------MKKKVLMAAEAVEGGVGRVI 244 (268)
T ss_pred ----------c------------------------CC-c---------------------cHHHHHHHHHHHHcCCCEEE
Confidence 1 22 3 99999999999999999999
Q ss_pred eeccccCceeeehhhhcCCCcceeec
Q 010815 311 LLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 311 ~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|+|++.|++++.++ ++.||+|.+
T Consensus 245 I~~g~~~~~l~~~l---~G~GT~I~~ 267 (268)
T PRK14058 245 IADANVDDPISAAL---AGEGTVIVN 267 (268)
T ss_pred EEcCCCcchHHHHh---CCCceEEec
Confidence 99999999877666 345999965
|
|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=323.38 Aligned_cols=287 Identities=21% Similarity=0.257 Sum_probs=234.7
Q ss_pred ccHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCch
Q 010815 5 IPWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 5 ~~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
.++.++++||+.|+..|.++|||||||||++.++++.|+++++++|+|+|++++|+++.++.+.+|..|++
T Consensus 50 ~~~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~~gie~~~v~G~RVTd~~tl~vv~~~l~~vn~~lv~--------- 120 (398)
T PRK04531 50 DDLEALASSLSFLQEVGLTPIVVHGAGPQLDAELDAAGIEKETVNGLRVTSPEALAIVRKVFQRSNLDLVE--------- 120 (398)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHHcCCCcEEECCEecCCHHHHHHHHHHHHHHHHHHHH---------
Confidence 46789999999999999999999999999999999999999999999999999999996666688887765
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+ |+.+|++|+|||++|++.+++|+.+|+|+|
T Consensus 121 ------------~-------------------------------------I~~~L~~g~IPVlsplg~~~~G~~~NvnaD 151 (398)
T PRK04531 121 ------------A-------------------------------------VESSLRAGSIPVIASLGETPSGQILNINAD 151 (398)
T ss_pred ------------H-------------------------------------HHHHHHCCCEEEEeCcEECCCCcEEEECHH
Confidence 1 889999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-CCCccccccCH-HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 165 EVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
++|++||.+|+|+||||+||++|+. .+|++|++++. ++.+.++..+. ++
T Consensus 152 ~vA~~LA~aL~a~KLIfltdv~GV~d~~g~~i~~i~~~~e~~~l~~~~~-----------------------------vt 202 (398)
T PRK04531 152 VAANELVSALQPYKIIFLTGTGGLLDADGKLISSINLSTEYDHLMQQPW-----------------------------IN 202 (398)
T ss_pred HHHHHHHHHcCCCEEEEEECCCCccCCCCCCcccCCHHHHHHHHHhcCC-----------------------------CC
Confidence 9999999999999999999999985 58999999997 46777754321 12
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeee
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLL 322 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~ 322 (500)
| | |.+||++|..+++ +++++|++++..|++++.
T Consensus 203 ------------------------g-G---------------------M~~KL~~a~~al~-~~~~~~~V~i~~~~~Ll~ 235 (398)
T PRK04531 203 ------------------------G-G---------------------MKLKLEQIKELLD-RLPLESSVSITSPSDLAK 235 (398)
T ss_pred ------------------------c-c---------------------HHHHHHHHHHHHh-CCCcEEEEEecCCCHHHH
Confidence 2 3 9999999999995 577899999999999999
Q ss_pred hhhhcCCCcceeeccccc-ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecC
Q 010815 323 ELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 401 (500)
Q Consensus 323 ~l~~~~~~GT~i~~d~~~-~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~ 401 (500)
++|++++.||+|.+...+ ..+.+.+-|++.+.+++...+.. ......++ . ...+-+..++..=|++.+.. .
T Consensus 236 eLft~~G~GT~I~~g~~i~~~~~~~~~d~~~l~~ll~~sf~r----~~~~~y~~-~-~~~~~~y~~~~y~~~Aiv~~--~ 307 (398)
T PRK04531 236 ELFTHKGSGTLVRRGERILRATDWDELDLERLNLLIESSFGR----TLKPDYFD-T-TQLLRAYVSENYRAAAILTE--T 307 (398)
T ss_pred HHccCCCCCeEEecCCceeeeCChhhcCHHHHHHHHhhhccc----chHHHHhc-c-CCceEEEEeCCCcEEEEEec--C
Confidence 999999999999986653 34455566899999997443332 22222333 2 23333333444445555542 2
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA 433 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a 433 (500)
....++..|+|.+.-||.|++..++..+.+..
T Consensus 308 ~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~ 339 (398)
T PRK04531 308 GGGPYLDKFAVLDDARGEGLGRAVWNVMREET 339 (398)
T ss_pred CCceEeEEEEEccchhhcChHHHHHHHHHhhC
Confidence 46789999999999999999999999888654
|
|
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=303.76 Aligned_cols=234 Identities=24% Similarity=0.315 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHH-cCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHH-HHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHH-LGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM-EAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~-~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~-~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.+.. .|.++|||||+|+|++++++++++++++++|+|+|++++++++. .+++.+|..+++.
T Consensus 16 ~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~~~~n~~lv~~-------- 87 (252)
T cd04249 16 LEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTANKQLMAQ-------- 87 (252)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCCEEECCEecCCHHHHHHHHHHHcCcccHHHHHH--------
Confidence 5689999998854 57899999999999999999999999999999999999999995 4568999999995
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+.++|++ ++++++.|++++++++.+ .|++++|+|+++|.+.|+.+|+.|+|||++|++++++|+++|+|+|
T Consensus 88 -l~~~Gv~----a~~l~~~~~~~~~~~~~~----~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~~g~~~~g~~~~~~~D 158 (252)
T cd04249 88 -AIKAGLK----PVGLSLADGGMTAVTQLD----PELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQLMNVNAD 158 (252)
T ss_pred -HHhCCCC----ceeeeccCCCEEEEEEcC----CCCCcccceEEEcHHHHHHHHHCCCEEEECCCEECCCCCEeeecHH
Confidence 5688988 999999999999999875 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 165 EVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
++|+++|.+|+|+ ++|+|||||++ .++++|++++.+|+++++..+. +
T Consensus 159 ~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g~-----------------------------~-- 206 (252)
T cd04249 159 QAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV-----------------------------I-- 206 (252)
T ss_pred HHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcCC-----------------------------C--
Confidence 9999999999999 78999999986 4789999999999888864321 1
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeh
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 323 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~ 323 (500)
+| | |.+|+.+|..++++|+.++||++|+.|+. +.+
T Consensus 207 ----------------------~g-G---------------------m~~kl~~a~~~~~~~~~~v~I~~g~~~~~-l~~ 241 (252)
T cd04249 207 ----------------------TD-G---------------------MIVKVNAALDAAQSLRRGIDIASWQYPEQ-LTA 241 (252)
T ss_pred ----------------------cC-C---------------------cHHHHHHHHHHHHhCCCeEEEEeCCCccH-HHH
Confidence 22 3 99999999999999988999999999985 678
Q ss_pred hhhcCCCccee
Q 010815 324 LFKRDGMGTMV 334 (500)
Q Consensus 324 l~~~~~~GT~i 334 (500)
+|++++.||+|
T Consensus 242 ~l~g~~~GT~I 252 (252)
T cd04249 242 LLAGEPVGTKI 252 (252)
T ss_pred HHcCCCCCcCC
Confidence 99988999986
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=308.12 Aligned_cols=243 Identities=16% Similarity=0.201 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++||++|+++|+++|||||||||++.++.++++.+++ +|+|+||.. ..+.++++.+.+.+.+.|++ .|
T Consensus 30 ~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~~~~-~g~rvt~~~--~~v~~~~g~i~~~i~~~L~~-----~l 101 (316)
T PRK12352 30 VKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHER-EGLPLTPLA--NCVADTQGGIGYLIQQALNN-----RL 101 (316)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCccccc-CCCCCCCHH--HHHHHHHHHHHHHHHHHHHH-----HH
Confidence 47899999999999999999999999999999999999999 699999986 45578888777888777765 67
Q ss_pred hhcCCCC---CccccceeeccccEEE-EEEcCcc-----------CCcccceeee--------------EeeeCHHHHHH
Q 010815 87 RRHGDSS---RWHEVGVSVASGNFLA-AKRKGVV-----------DGVDYGATGE--------------VKKVDVTRMRE 137 (500)
Q Consensus 87 ~~~Gi~~---~~~a~~l~~~d~~~~~-~~~~~~~-----------~~~d~g~~G~--------------v~~vd~~~I~~ 137 (500)
.++|... -+.++++++.|++|++ ++|.|++ +++||+|++. |++||.+.|+.
T Consensus 102 ~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~g~G~rrvv~sp~pv~~V~~~~I~~ 181 (316)
T PRK12352 102 ARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVEAPAIKA 181 (316)
T ss_pred HhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecCCCCeEEecCCCCCceEEcHHHHHH
Confidence 7777321 0114778899999994 7788877 5568888555 99999999999
Q ss_pred HHhCCCcEEEc-----CcccCCCCC----eeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 138 RLDGGCLVILS-----NLGYSSSGE----VLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 138 lL~~g~IPVi~-----~~~~~~~g~----~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
||++|+|||++ |++.+..|+ .+|||+|.+|+.+|.+|+||+|||||||+|+. +++++|++++.+|+
T Consensus 182 ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTDV~GV~~d~~~~~~~li~~lt~~e~ 261 (316)
T PRK12352 182 LIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATM 261 (316)
T ss_pred HHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeCchhhccCCCCCCcccccccCHHHH
Confidence 99999997777 887776554 55699999999999999999999999999884 35789999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++.++. |..||
T Consensus 262 ~~li~~g~-----------------------------------------------------------------i~~Gg-- 274 (316)
T PRK12352 262 TRYMQEGH-----------------------------------------------------------------FPPGS-- 274 (316)
T ss_pred HHHHhcCC-----------------------------------------------------------------cCCCC--
Confidence 99985432 22233
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||++|..|+++|+.++||++ ++. +.++++++ .||+|..
T Consensus 275 -------M~pKl~aA~~al~~Gv~~v~I~~---~~~-i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 275 -------MLPKIIASLTFLEQGGKEVIITT---PEC-LPAALRGE-TGTHIIK 315 (316)
T ss_pred -------CHHHHHHHHHHHHhCCCeEEEcc---hHH-HHHHHcCC-CCeEEEe
Confidence 99999999999999999999997 554 45777766 7999864
|
|
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=302.98 Aligned_cols=214 Identities=19% Similarity=0.211 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++||++|++.|.++||||||||+++..++ +.++ ..+.+....+|..|++ .|
T Consensus 53 ~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~----~~~~------------~~~~~v~~~~n~~Lv~---------~L 107 (271)
T cd04236 53 VQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS----DLEL------------QAARSRLVKDCKTLVE---------AL 107 (271)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc----CCcc------------hheehhHHHHHHHHHH---------HH
Confidence 689999999999999999999999999998886 2222 1143333389999999 46
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+.+|++ ++++++. ++++++++ ..|+|++|+|++||.+.|+.+|++|+|||++|++++++|+.+|+|+|++
T Consensus 108 ~~~G~~----A~gl~g~-~~~i~a~~-----~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisplg~~~~G~~~NiNaD~~ 177 (271)
T cd04236 108 QANSAA----AHPLFSG-ESVLQAEE-----PEPGASKGPSVSVDTELLQWCLGSGHIPLVCPIGETSSGRSVSLDSSEV 177 (271)
T ss_pred HhCCCC----eeeecCc-cceEEEEE-----cccCCccceEEEECHHHHHHHHhCCCeEEECCceECCCCCEEEECHHHH
Confidence 788988 8999987 68999987 3688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-CCCccccccCH-HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 167 ATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
|++||.+|+|+||||+||++|+. .++++|++++. +|++++++++. ++|
T Consensus 178 A~~lA~aL~A~KLIfltd~~GV~~~~g~lI~~l~~~~e~~~li~~g~-----------------------------i~g- 227 (271)
T cd04236 178 TTAIAKALQPIKVIFLNRSGGLRDQKHKVLPQVHLPADLPSLSDAEW-----------------------------LSE- 227 (271)
T ss_pred HHHHHHHcCCCEEEEEeCCcceECCCCCCccccCcHHHHHHHHhCCE-----------------------------EcC-
Confidence 99999999999999999999984 57999999995 89999998765 444
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccc---hHHHHHHHHHHHcCCCeEEeeccccCceee
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY---LSELAAAAFVCRRGVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll 321 (500)
| | .+|+++|+.++.+|++ |||++ |++++
T Consensus 228 ------------------------G---------------------m~~ki~ki~~~l~~l~~g~s-v~I~~---~~~ll 258 (271)
T cd04236 228 ------------------------T---------------------EQNRIQDIATLLNALPSMSS-AVITS---AETLL 258 (271)
T ss_pred ------------------------C---------------------eeechHHHHHHHHhcccCCe-EEEeC---hHHHH
Confidence 4 6 8899999999999999 99998 78899
Q ss_pred ehhhhcCCCccee
Q 010815 322 LELFKRDGMGTMV 334 (500)
Q Consensus 322 ~~l~~~~~~GT~i 334 (500)
.|+|++.+.||+|
T Consensus 259 ~elft~~g~GT~~ 271 (271)
T cd04236 259 TELFSHKGSGTLF 271 (271)
T ss_pred HHHhccCCCCCcC
Confidence 9999999999987
|
Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF). |
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=285.45 Aligned_cols=187 Identities=31% Similarity=0.480 Sum_probs=171.6
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
++.+++++|+.|+..|.++|||||+|+++|.++++++++.++++|.|+|++++++.+ +.+++++|..+++
T Consensus 14 ~~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~~~~~~~~~~g~~~~~i~~--------- 84 (231)
T TIGR00761 14 LLEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLRVTDKETLEVVEMVLIGQVNKELVA--------- 84 (231)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHHHHcCCCCEecCCCccCCHHHHHHHHHHHhcchHHHHHH---------
Confidence 478999999999999999999999999999999999999999999999999999998 4557799999998
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|+++|++ ++++++.+++++++++. ++.|++++|+++.++.+.|+.+|++|+|||++|++++.+|+++|+|+|
T Consensus 85 ~L~~~G~~----a~~l~~~~~~~it~~~~---~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~~~~~~~g~~~~l~sD 157 (231)
T TIGR00761 85 LLNKHGIN----AIGLTGGDGQLFTARSL---DKEDLGYVGEIKKVNKALLEALLKAGYIPVISSLALTAEGQALNVNAD 157 (231)
T ss_pred HHHhCCCC----cccccCCCCCEEEEEEC---CCccCCcccceEEEcHHHHHHHHHCCCeEEECCCccCCCCcEEEeCHH
Confidence 57788988 99999999999999875 456899999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccCC-C-CccccccCHHHHHHHHH
Q 010815 165 EVATACALAIEADKLICIIDGPILDE-S-GHLIRFLTLQEADSLIR 208 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~~-~-g~~I~~i~~~e~~~~~~ 208 (500)
.+|++||.+|+||+|+|+|||||+.. + +++|++++.+|+++++.
T Consensus 158 ~~A~~lA~~l~A~~li~ltdv~Gv~~~d~~~~i~~i~~~e~~~l~~ 203 (231)
T TIGR00761 158 TAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLEEIEQLIE 203 (231)
T ss_pred HHHHHHHHHcCCCEEEEEECCCCeecCCCCeeccccCHHHHHHHHH
Confidence 99999999999999999999999853 3 45999999999888864
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model. |
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=311.66 Aligned_cols=401 Identities=42% Similarity=0.577 Sum_probs=332.3
Q ss_pred cccHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCC
Q 010815 4 FIPWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPP 82 (500)
Q Consensus 4 ~~~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~ 82 (500)
-.|+..+++|++.|+..|.++|||||.++|++.++...++++++..+.|+|++.++.++ +..+++.|..++.
T Consensus 108 t~~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~~~~ie~~y~~~~RvTda~t~q~~~~~~~~E~n~~lv~------- 180 (520)
T KOG2436|consen 108 TSLLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLAERGIEPEYVDGYRVTDAHTLQAAKESVSLEANLNLVI------- 180 (520)
T ss_pred cchHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHcCCCcccccceecccHHHHHHhhhcchhhhhhHHHH-------
Confidence 45788999999999999999999999999999999999999999999999999999999 4599999988888
Q ss_pred chhhhhcCCCCCccccceeec--cccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeee
Q 010815 83 ICNIRRHGDSSRWHEVGVSVA--SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 160 (500)
Q Consensus 83 ~~~l~~~Gi~~~~~a~~l~~~--d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~ 160 (500)
+|+++|-. +.+.++. .++++.+++++++++.+|+++|+|.+||.+.|+.++++|.+|+++.++.+.+|+.+|
T Consensus 181 --nL~~~g~~----ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~L~sla~TaSGqvln 254 (520)
T KOG2436|consen 181 --NLSQLGTR----ARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPLLRSLAATASGQVLN 254 (520)
T ss_pred --HHHHhhce----eccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchhehhhcccCccceEE
Confidence 56778866 4444443 367999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHcCCCEEEEEec-CcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC-C
Q 010815 161 CNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS-I 238 (500)
Q Consensus 161 i~~D~~a~~lA~~l~Ad~li~lTd-v~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (500)
||+|++|.++|.+|+|+++++++| .++++.+|+.++.++..+...++.....|.++++..++|+.+--.+-.+...+ .
T Consensus 255 vNa~~~a~elA~~L~~~kli~l~d~g~~l~e~ge~~S~l~l~~e~~~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~~ 334 (520)
T KOG2436|consen 255 VNADEVAGELALALGPDKLILLMDKGRILKENGEDISSLILQEEDAGLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSYN 334 (520)
T ss_pred eeHHHHhhHHHhccCcceeEEecccccccccCcccccccccchhHhhhhhhhhhcccccccchhhhhheeeccCcCCCCC
Confidence 999999999999999999999999 55778999999999999988888888889999999999998654442333222 1
Q ss_pred c---cccccCCCCccchh-hhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 010815 239 G---SVYSSQNGKTFSER-RIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 314 (500)
Q Consensus 239 ~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (500)
+ ++.-++ .+-|.+. ....+.+|.+++.++++|+-.|.++.++.+++.|.+|++..+.+|..-|..+++++|..|+
T Consensus 335 i~~~t~~n~~-~~~~te~G~~t~~~~gv~~~k~~sl~~~~~~~al~~~~~~~rln~~lse~i~a~~~~~~~i~~~~~~D~ 413 (520)
T KOG2436|consen 335 IAITTQQNLI-KELFTEKGAGTLISGGVGINKGNSLISQSFKRALDLEEYIDRLNGSLSELIAAGDYCGGAIKTYELSDG 413 (520)
T ss_pred cceeeccccc-ceeeccCCCCccccCceeeecCcccccchhhhhcchHHHHHHhhchHHHHHHHHHHhccceEEEEccCC
Confidence 2 222222 3334443 7788899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeeehhhhcCCCcceeecccccccccCCcccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhcCcEEEEEECCeEEEE
Q 010815 315 TIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALDSFYVVEREGQIIAC 393 (500)
Q Consensus 315 ~~~~~ll~~l~~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l~~~~v~~~dg~IVG~ 393 (500)
....-++.+.|...+.||.. .+-+..++.+-.+|++.|....++......+ ..++.+.+. ..+.++.++.+++++.|
T Consensus 414 ~~e~V~~ldkf~~~~~~~~~-~~V~d~ifn~~~~dfp~i~wr~r~~~~~~~w~f~rs~g~L~-~~~~~lfwyg~~~i~~~ 491 (520)
T KOG2436|consen 414 TNEGVLYLDKFAVSGMGTGS-SDVSDGIFNVMVEDFPEILWRSRPLNEVNKWYFRRSEGSLR-ALDFKLFWYGEGQIIKC 491 (520)
T ss_pred CcccceeeeecccCCccccc-chhhHHHHHHHHHhhhhheeecccccccceEEEeccHHHHh-ccCcEEEEecCcHHHHH
Confidence 87776778888777777776 5666667777788888766665555444433 333444444 44666777888999999
Q ss_pred EEEeeecCCCeEEEEEEEEccCCcCCcHHHHH
Q 010815 394 AALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 425 (500)
Q Consensus 394 ~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~L 425 (500)
..+.++. ++..+.|.++-|+++-+..+
T Consensus 492 a~~~~~~-----~v~~~~~~~d~~~s~~n~k~ 518 (520)
T KOG2436|consen 492 AALFQFF-----EVAAMSVASDIRPSWQNDKL 518 (520)
T ss_pred HHhhhhh-----HHHHhhhccccCccccCCCC
Confidence 8887543 56677888888887765543
|
|
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=260.37 Aligned_cols=223 Identities=17% Similarity=0.208 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++.|+.++ |.++|||||||++++..++++|+++ |.|+|++.++..+.+++.++|..+++ +|
T Consensus 25 l~~l~~~l~~l~--g~~vvlVhGgg~~~~~~~~~~g~~~----g~~~~~~~~l~~~~~~~~~ln~~~~~---------~l 89 (252)
T cd04241 25 LERIARELAEAI--DEKLVLVHGGGSFGHPKAKEYGLPD----GDGSFSAEGVAETHEAMLELNSIVVD---------AL 89 (252)
T ss_pred HHHHHHHHHhcc--CCCEEEEECCCcccCHHHHHhCCCc----CCCchhhhhHHHHHHHHHHHHHHHHH---------HH
Confidence 445666666665 9999999999999999999999986 67899999999997788899999888 56
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i~~D~ 165 (500)
.++|++ +.++++.+. ..+. +|.+..++.+.|+.+|+.|+|||++++ +.+.+++.+|+|+|+
T Consensus 90 ~~~g~~----a~~l~~~~~--~~~~------------~g~~~~~~~~~l~~ll~~g~iPVi~~~~~~~~~~~~~~~~~D~ 151 (252)
T cd04241 90 LEAGVP----AVSVPPSSF--FVTE------------NGRIVSFDLEVIKELLDRGFVPVLHGDVVLDEGGGITILSGDD 151 (252)
T ss_pred HHCCCC----eEEEChHHe--EEec------------CCeeeeecHHHHHHHHhCCCEEEEcCCeEecCCCCeEEeChHH
Confidence 788988 788887763 2221 578889999999999999999999875 467778899999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSV 241 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (500)
+|+.+|.+|+||+|+|+|||||++. ++++|++++.++++++......
T Consensus 152 ~A~~lA~~l~A~~li~ltdv~Gv~~~~P~~~~~i~~i~~~~~~~~~~~~~~----------------------------- 202 (252)
T cd04241 152 IVVELAKALKPERVIFLTDVDGVYDKPPPDAKLIPEIDVGSLEDILAALGS----------------------------- 202 (252)
T ss_pred HHHHHHHHcCCCEEEEEeCCCeeECCCCCCCeEcceeCccchHHHHHhcCc-----------------------------
Confidence 9999999999999999999999853 5999999999888887642100
Q ss_pred cccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceee
Q 010815 242 YSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll 321 (500)
++ .+.+|| |.+||++|..++++|++ +||+|++.|+. +
T Consensus 203 -------------------~~-------------~~~tGG---------m~~Kl~aa~~a~~~Gv~-v~I~~g~~~~~-l 239 (252)
T cd04241 203 -------------------AG-------------TDVTGG---------MAGKIEELLELARRGIE-VYIFNGDKPEN-L 239 (252)
T ss_pred -------------------CC-------------ccccCC---------HHHHHHHHHHHHhcCCe-EEEEeCCCHHH-H
Confidence 00 012333 99999999999999998 99999999876 5
Q ss_pred ehhhhcCCCccee
Q 010815 322 LELFKRDGMGTMV 334 (500)
Q Consensus 322 ~~l~~~~~~GT~i 334 (500)
.+++.++..||.|
T Consensus 240 ~~~l~g~~~GT~i 252 (252)
T cd04241 240 YRALLGNFIGTRI 252 (252)
T ss_pred HHHHcCCCCceEC
Confidence 6777777889975
|
Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=256.27 Aligned_cols=237 Identities=19% Similarity=0.193 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHH-HcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~-~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
...+++|+.|...|+++|||||||||++.++. ..+.... .+++.+|+++ .+++|.++++|+++|.+ +
T Consensus 29 ~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~~------~~~~~pl~~~~a~sqg~iGy~~~q~l~~-----~ 97 (312)
T PRK12686 29 REAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNSN------KVPAMPLDTCVAMSQGMIGYWLQNALNN-----E 97 (312)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhcccc------CCCCCChhhhhhhccchhhHHHHHHHHH-----H
Confidence 57899999999999999999999999996655 4444433 2578999999 99999999999999876 8
Q ss_pred hhhcCCCCCccccceee----ccccEEE-EEEcCcc----------------CCcc--cceeeeEee------eCHHHHH
Q 010815 86 IRRHGDSSRWHEVGVSV----ASGNFLA-AKRKGVV----------------DGVD--YGATGEVKK------VDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~----~d~~~~~-~~~~~~~----------------~~~d--~g~~G~v~~------vd~~~I~ 136 (500)
|.++++..++.++-.+. .|..|.. .++.|+. ...| .||++.|.+ |+.+.|+
T Consensus 98 l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~~G~rrvV~sP~P~~ive~~~I~ 177 (312)
T PRK12686 98 LTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAGRGYRRVVPSPKPQEIIEHDTIR 177 (312)
T ss_pred HHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCCCCeEEeeCCCCCccccCHHHHH
Confidence 88888876665544333 3555555 3344432 1223 489999988 9999999
Q ss_pred HHHhCCCcEEEc-----CcccCCCCCe----eecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHH
Q 010815 137 ERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQE 202 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~~~g~~----~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e 202 (500)
.||++|+|||++ |+..+ ++.. .++|+|.+|++||.+|+||+|+|||||+|++ +++++|++++.+|
T Consensus 178 ~Ll~~G~IpI~~GgggIPVv~~-~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVdGVy~~~~~p~ak~I~~I~~~e 256 (312)
T PRK12686 178 TLVDGGNIVIACGGGGIPVIRD-DNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVENVFINFNKPNQQKLDDITVAE 256 (312)
T ss_pred HHHHCCCEEEEeCCCCCCeEec-CCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCchhhccCCCCCCCeECCccCHHH
Confidence 999999999976 55443 3333 3679999999999999999999999999984 4579999999999
Q ss_pred HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCcccccccccccc
Q 010815 203 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 282 (500)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 282 (500)
+++++.++. |.+||
T Consensus 257 ~~~li~~g~-----------------------------------------------------------------~~tGG- 270 (312)
T PRK12686 257 AKQYIAEGQ-----------------------------------------------------------------FAPGS- 270 (312)
T ss_pred HHHHhhCCC-----------------------------------------------------------------ccCCC-
Confidence 998875421 33445
Q ss_pred chhhhcccchHHHHHHHHHHHcCC-CeEEeeccccCceeeehhhhcCCCcceee
Q 010815 283 ERLSRLNGYLSELAAAAFVCRRGV-QRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|.+|+++|..++++|+ .+++|.+ ++.+ .+++.++ .||.|.
T Consensus 271 --------M~pKveAA~~av~~g~g~~viI~~---~~~i-~~aL~G~-~GT~I~ 311 (312)
T PRK12686 271 --------MLPKVEAAIDFVESGEGKKAIITS---LEQA-KEALAGN-AGTHIT 311 (312)
T ss_pred --------cHHHHHHHHHHHHhCCCCEEEEeC---chHH-HHHhCCC-CCeEEe
Confidence 9999999999999865 4566665 4433 3555555 799984
|
|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=254.90 Aligned_cols=241 Identities=20% Similarity=0.197 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
....++.|+.|...|+++|||||||||++.++.+....... -+++.+|+.+ .+++|.|.+.|+++|.+ +
T Consensus 30 v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~~-----~~~~~pld~~~a~sqG~igy~l~~al~~-----~ 99 (313)
T PRK12454 30 VRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKDV-----GIPPFPLDVAGAMTQGWIGYMIQQALRN-----E 99 (313)
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhccc-----CCCCCccchhhhhhhHHHHHHHHHHHHH-----H
Confidence 34678999999999999999999999999998876555321 1577899999 99999999999999876 8
Q ss_pred hhhcCCCCCccccc----eeeccccEEE-EEEcCccCCc------------------ccceeeeE------eeeCHHHHH
Q 010815 86 IRRHGDSSRWHEVG----VSVASGNFLA-AKRKGVVDGV------------------DYGATGEV------KKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~a~~----l~~~d~~~~~-~~~~~~~~~~------------------d~g~~G~v------~~vd~~~I~ 136 (500)
|.++|++.++.++- +...|..|.. .+|.|++... ..||.-.| +.+|.+.|+
T Consensus 100 l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~g~g~RrvV~SP~P~~ive~~aI~ 179 (313)
T PRK12454 100 LAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDAGRGWRRVVPSPDPLGIVEIEVIK 179 (313)
T ss_pred HHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcCCCceEEEeCCCCCccccCHHHHH
Confidence 99999987665544 3334666776 5566765443 23344433 458999999
Q ss_pred HHHhCCCcEEEcCcc----cCCCCCeee----cCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 137 ERLDGGCLVILSNLG----YSSSGEVLN----CNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~~~~----~~~~g~~~~----i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
.||++|+|||+++.+ ++.++++++ +|+|.+|+.||.+|+||+|||||||||++ +++++|++++.+|+
T Consensus 180 ~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIiLTdVdGVy~~~~~p~~~~i~~It~~e~ 259 (313)
T PRK12454 180 ALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFIILTDVEKVYLNYGKPDQKPLDKVTVEEA 259 (313)
T ss_pred HHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEEEEeCCceeeCCCCCCCCeEccccCHHHH
Confidence 999999999999553 556666666 57899999999999999999999999884 56899999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++.++. |++||
T Consensus 260 ~~~i~~g~-----------------------------------------------------------------~~~Gg-- 272 (313)
T PRK12454 260 KKYYEEGH-----------------------------------------------------------------FKAGS-- 272 (313)
T ss_pred HHHHhcCC-----------------------------------------------------------------cCCCC--
Confidence 99874321 34445
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||++|..++++|+.++||.+ ++.+ .+++.++ .||+|.+
T Consensus 273 -------M~pKv~AA~~~v~~gg~~a~I~~---~~~i-~~aL~G~-~GT~I~~ 313 (313)
T PRK12454 273 -------MGPKILAAIRFVENGGKRAIIAS---LEKA-VEALEGK-TGTRIIP 313 (313)
T ss_pred -------hHHHHHHHHHHHHcCCCeEEECc---hHHH-HHHHCCC-CCeEeCC
Confidence 99999999999999999999985 3443 4555555 7999864
|
|
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=240.75 Aligned_cols=224 Identities=29% Similarity=0.377 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.++..|.++|||||||++++..+.+++...++.++.++++.....+++..++..+..+++ .|
T Consensus 15 ~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l 85 (248)
T cd02115 15 LRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMSNLLIAA---------AL 85 (248)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 678999999999899999999999999999999999888877888999999888888888888888888 56
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCC---CCCeeecCH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS---SGEVLNCNT 163 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~---~g~~~~i~~ 163 (500)
+++|++ +..+.+.+..+... +++++|.+..++.+.|+.+|++|.|||+++.+... .++..++++
T Consensus 86 ~~~gi~----a~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~~~~~~~~~~s 152 (248)
T cd02115 86 EQHGIK----AVPLDLTQAGFASP---------NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGS 152 (248)
T ss_pred HhCCCC----eEEEchHHcCeEeC---------CCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCCceeeecCCCH
Confidence 788988 77887777655543 46889999999999999999999999999987765 677889999
Q ss_pred HHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 164 YEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
|.+|+.+|.+|+|++|+|+|||||++ +++++|++++.+|++++...+
T Consensus 153 D~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~g-------------------------- 206 (248)
T cd02115 153 DSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAG-------------------------- 206 (248)
T ss_pred HHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHcC--------------------------
Confidence 99999999999999999999999983 248999999999888875321
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
+ |..|++++..++++|+ +++|+|+..
T Consensus 207 --------------------------------~---------------------~~~k~~a~~~~~~~~~-~v~I~~~~~ 232 (248)
T cd02115 207 --------------------------------A---------------------MVLKPKAADPAARAGI-PVRIANTEN 232 (248)
T ss_pred --------------------------------C---------------------CccCHHHHHHHHHcCC-cEEEEeCCC
Confidence 2 8899999999999996 599999999
Q ss_pred CceeeehhhhcCCCccee
Q 010815 317 GGVLLLELFKRDGMGTMV 334 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i 334 (500)
|+++ ++|++++.||+|
T Consensus 233 ~~~l--~~~~~~~~GT~I 248 (248)
T cd02115 233 PGAL--ALFTPDGGGTLI 248 (248)
T ss_pred cccc--cccCCCCCCCCC
Confidence 9876 889888899986
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. |
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=236.12 Aligned_cols=228 Identities=21% Similarity=0.166 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhh
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
...++.|+.|... +++||+||+|||++.++.+...... .++.+|+++ .+++|.|+|+|+++|
T Consensus 30 ~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-------~~~~pld~~~a~sqG~iGy~l~q~l--------- 92 (297)
T PRK09411 30 ASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-------VEPYPLDVLVAESQGMIGYMLAQSL--------- 92 (297)
T ss_pred HHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-------CCCCCchhhhhhcccHHHHHHHHHH---------
Confidence 3568889999988 9999999999999998877655422 378999999 999999999999964
Q ss_pred hhcCCCCCccccce----eeccccEEE-EEEcCccCC----------------cccceeeeE-------eeeCHHHHHHH
Q 010815 87 RRHGDSSRWHEVGV----SVASGNFLA-AKRKGVVDG----------------VDYGATGEV-------KKVDVTRMRER 138 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l----~~~d~~~~~-~~~~~~~~~----------------~d~g~~G~v-------~~vd~~~I~~l 138 (500)
...++..++.++-+ ...|..|.. .+|.|.+.. .|..+.++| +.||.+.|+.|
T Consensus 93 ~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~rrVVpSP~P~~iVe~~~I~~L 172 (297)
T PRK09411 93 SAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELL 172 (297)
T ss_pred HHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCceEEEccCCCCcceECHHHHHHH
Confidence 45566654544443 334666766 555564422 244467777 88999999999
Q ss_pred HhCCCcEEEc-----CcccCCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHHHHHH
Q 010815 139 LDGGCLVILS-----NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 139 L~~g~IPVi~-----~~~~~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~~~~~ 208 (500)
|++|+|||++ |++.+.+|...|+|+|.+|+.||.+|+||+|+|||||||+. +++++|++++.+++++++.
T Consensus 173 l~~G~IVI~~gGGGIPV~~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~~n~~~p~~~~I~~it~~e~~~~~~ 252 (297)
T PRK09411 173 LKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAK 252 (297)
T ss_pred HHCCCEEEecCCCCCCeEEcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhccCCCCCCCcCCCCcCHHHHHHhcc
Confidence 9999999987 77766568889999999999999999999999999999884 4578999999999877742
Q ss_pred hhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhc
Q 010815 209 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 288 (500)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 288 (500)
. +| |
T Consensus 253 ~--------------------------------------------------------~G-g------------------- 256 (297)
T PRK09411 253 A--------------------------------------------------------DG-A------------------- 256 (297)
T ss_pred C--------------------------------------------------------CC-C-------------------
Confidence 1 22 3
Q ss_pred ccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceee
Q 010815 289 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|.+|+++|..++++|.++++|.+ ++.+ .+++.++ .||+|.
T Consensus 257 --M~pKVeAA~~~v~~~g~~a~I~~---l~~~-~~~l~G~-~GT~I~ 296 (297)
T PRK09411 257 --MGPKVTAVSGYVRSRGKPAWIGA---LSRI-EETLAGE-AGTCIS 296 (297)
T ss_pred --cHHHHHHHHHHHHhCCCeEEECC---hhHH-HHHHCCC-CCeEEe
Confidence 99999999999999888888864 3433 3555554 699984
|
|
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=235.73 Aligned_cols=238 Identities=18% Similarity=0.199 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+...++.|+.|.+.|+++|||||||||++.++........ .++..+|+.+ .+.+|++.+.|..+|.+ +
T Consensus 27 ~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~------~~~~~pld~~~a~~~G~ig~~~~~al~~-----~ 95 (308)
T cd04235 27 VKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAE------KVPAYPLDVCGAMSQGMIGYMLQQALDN-----E 95 (308)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc------cCCCCCcchhcchhhHHHHHHHHHHHHH-----H
Confidence 4578899999999999999999999999999887665532 3677889999 89999999999998876 8
Q ss_pred hhhcCCCCCccccc----eeeccccEEE-EEEcCccCCc--------c----------cceeee------EeeeCHHHHH
Q 010815 86 IRRHGDSSRWHEVG----VSVASGNFLA-AKRKGVVDGV--------D----------YGATGE------VKKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~a~~----l~~~d~~~~~-~~~~~~~~~~--------d----------~g~~G~------v~~vd~~~I~ 136 (500)
|.++|++.++.++- +...|..|-. .+|.|.+... . .||.-. ++.++.+.|+
T Consensus 96 l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~g~rrvV~SP~P~~iv~~~~I~ 175 (308)
T cd04235 96 LPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGRGYRRVVPSPKPKDIVEIEAIK 175 (308)
T ss_pred HHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCCCceeeeCCCCCccccCHHHHH
Confidence 89999885444332 3333555655 4455644331 1 223332 3458999999
Q ss_pred HHHhCCCcEEEc-----CcccCCCCCe----eecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHH
Q 010815 137 ERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQE 202 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~~~g~~----~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e 202 (500)
.||++|+|||++ |+..+. +.. .++|+|++|+.||.+|+||+|+|+|||||++ +++++|++++.+|
T Consensus 176 ~Ll~~g~IpI~~GggGiPv~~~~-~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdGVy~~~~~pda~~i~~Is~~e 254 (308)
T cd04235 176 TLVDNGVIVIAAGGGGIPVVREG-GGLKGVEAVIDKDLASALLAEEINADLLVILTDVDNVYINFGKPNQKALEQVTVEE 254 (308)
T ss_pred HHHHCCCEEEEECCCccCEEEcC-CceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCeEECCCCCCCCeEcCCcCHHH
Confidence 999999999998 555543 433 3578999999999999999999999999984 4589999999999
Q ss_pred HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCcccccccccccc
Q 010815 203 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 282 (500)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 282 (500)
+.+++.++. |.+||
T Consensus 255 ~~~l~~~g~-----------------------------------------------------------------~~tGG- 268 (308)
T cd04235 255 LEKYIEEGQ-----------------------------------------------------------------FAPGS- 268 (308)
T ss_pred HHHHHhcCc-----------------------------------------------------------------cccCC-
Confidence 888864321 33444
Q ss_pred chhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceee
Q 010815 283 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|.+|+++|..++++|..+++|.+ ++++ .+++.++ .||.|.
T Consensus 269 --------M~pKv~aA~~~a~~gg~~v~I~~---~~~i-~~aL~G~-~GT~I~ 308 (308)
T cd04235 269 --------MGPKVEAAIRFVESGGKKAIITS---LENA-EAALEGK-AGTVIV 308 (308)
T ss_pred --------cHHHHHHHHHHHHhCCCeEEECC---HHHH-HHHHCCC-CCeEEC
Confidence 99999999999999877888877 4443 4555555 699873
|
Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK). |
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=225.76 Aligned_cols=242 Identities=19% Similarity=0.169 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+...++.|+.|...|+++||+||+|||++.++.......+.. -+++.+|+++ .+++|+|+++|+++|.+ +
T Consensus 28 v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~~~----~~p~~PLd~~~AmsQG~IGy~l~qal~n-----~ 98 (312)
T COG0549 28 VKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADSEK----GVPAYPLDVLVAMSQGMIGYMLQQALRN-----E 98 (312)
T ss_pred HHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcccc----CCCCccHHHHhHhhhhHHHHHHHHHHHH-----H
Confidence 346788999999999999999999999999998877754332 2678899998 99999999999999987 7
Q ss_pred hhhcCCCCCccccce----eeccccEEE-EEEcCccCCc------------------ccceeee------EeeeCHHHHH
Q 010815 86 IRRHGDSSRWHEVGV----SVASGNFLA-AKRKGVVDGV------------------DYGATGE------VKKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l----~~~d~~~~~-~~~~~~~~~~------------------d~g~~G~------v~~vd~~~I~ 136 (500)
|..+|+++++.++-+ ...|..|.. .+|.|+++.. +.||.-. ++.++.+.|+
T Consensus 99 l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~rG~RRVVpSP~P~~IvE~~~Ik 178 (312)
T COG0549 99 LPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAGRGYRRVVPSPKPVRIVEAEAIK 178 (312)
T ss_pred HhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCCCCeeEecCCCCCccchhHHHHH
Confidence 889998765555443 444777887 5667776442 2334443 3458999999
Q ss_pred HHHhCCCcEEEc-----CcccCCC---CCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 137 ERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~~~---g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
.|+++|.++|.+ |+..+.. |-.-.||.|..++.||..++||.|++|||||.++ |+.+.+.+++++|+
T Consensus 179 ~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy~n~gkp~q~~L~~v~~~e~ 258 (312)
T COG0549 179 ALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVDAVYVNFGKPNQQALDRVTVDEM 258 (312)
T ss_pred HHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccchheecCCCccchhhcccCHHHH
Confidence 999999999987 4444433 4567899999999999999999999999999763 67899999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++|+.++ +|+.|+
T Consensus 259 ~~yl~eg-----------------------------------------------------------------~Fa~GS-- 271 (312)
T COG0549 259 EKYLAEG-----------------------------------------------------------------QFAAGS-- 271 (312)
T ss_pred HHHHhcC-----------------------------------------------------------------CCCCCC--
Confidence 9998663 388888
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+|++||+.+++++-+++.|.+- ++ +.+.+.+ ..||.|.+
T Consensus 272 -------M~PKVeAai~Fv~~~gk~A~ItsL---e~-~~~~l~g-~~GT~I~~ 312 (312)
T COG0549 272 -------MGPKVEAAISFVENTGKPAIITSL---EN-AEAALEG-KAGTVIVP 312 (312)
T ss_pred -------ccHHHHHHHHHHHcCCCceEECcH---HH-HHHHhcc-CCCcEecC
Confidence 999999999999999888877642 22 2344443 56999864
|
|
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-27 Score=235.41 Aligned_cols=244 Identities=18% Similarity=0.207 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|++.|+++|||||||+|++..+......+++.+ ++++......+...++.+.+.+.+.|++ .|
T Consensus 28 i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~a~~qg~l~~~l~~~~~~-----~l 100 (314)
T PRK12353 28 VKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAASEKN--KVPAMPLDVCGAMSQGYIGYHLQNALRN-----EL 100 (314)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccccCC--CCCCchhHHHHHHHhHHHHHHHHHHHHH-----HH
Confidence 6789999999999999999999999998887777666654433 4555444444578888888877777765 67
Q ss_pred hhcCCCCCccccc----eeeccccE-EEEEEcCcc------------CCcccce-eee-Eee----------eCHHHHHH
Q 010815 87 RRHGDSSRWHEVG----VSVASGNF-LAAKRKGVV------------DGVDYGA-TGE-VKK----------VDVTRMRE 137 (500)
Q Consensus 87 ~~~Gi~~~~~a~~----l~~~d~~~-~~~~~~~~~------------~~~d~g~-~G~-v~~----------vd~~~I~~ 137 (500)
..+|+..++..+- ++..|..| ..++|.|++ +|.||.+ +++ .++ +|.+.|+.
T Consensus 101 ~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~v~sp~p~~~v~~~~i~~ 180 (314)
T PRK12353 101 LKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKEDAGRGYRRVVPSPKPVDIVEIEAIKT 180 (314)
T ss_pred HhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeecCCceeEeccCCCCccccccHHHHHH
Confidence 7777753332222 23333335 446667766 4445554 343 333 79999999
Q ss_pred HHhCCCcEEEcCcccCC----CCCe----eecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHH
Q 010815 138 RLDGGCLVILSNLGYSS----SGEV----LNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEAD 204 (500)
Q Consensus 138 lL~~g~IPVi~~~~~~~----~g~~----~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~ 204 (500)
||+.|+|||+++.+..+ ++.. +++|+|++|+++|.+|+||+|+|+|||||++ +++++|++++.++++
T Consensus 181 lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTdvdGVy~~~~~~~a~~i~~i~~~e~~ 260 (314)
T PRK12353 181 LVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTAVDKVYINFGKPNQKKLDEVTVSEAE 260 (314)
T ss_pred HHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeCCccccCCCCCCCCeECcCcCHHHHH
Confidence 99999999999663222 2222 3699999999999999999999999999984 358999999988888
Q ss_pred HHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccch
Q 010815 205 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 284 (500)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 284 (500)
+++..+. +.+||
T Consensus 261 ~~~~~~~-----------------------------------------------------------------~~tGG--- 272 (314)
T PRK12353 261 KYIEEGQ-----------------------------------------------------------------FAPGS--- 272 (314)
T ss_pred HHHhcCC-----------------------------------------------------------------cCCCC---
Confidence 8764321 11223
Q ss_pred hhhcccchHHHHHHHHHH-HcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 285 LSRLNGYLSELAAAAFVC-RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||++|..++ +++...++|++ ++.+ ..++.++ .||.|.+
T Consensus 273 ------M~~Kl~aA~~a~~~~~g~~v~I~~---~~~i-~~~l~g~-~GT~i~~ 314 (314)
T PRK12353 273 ------MLPKVEAAISFVESRPGRKAIITS---LEKA-KEALEGK-AGTVIVK 314 (314)
T ss_pred ------cHHHHHHHHHHHHHcCCCEEEECC---chHH-HHHhCCC-CCeEecC
Confidence 999999999999 55555688987 4544 4555555 7999864
|
|
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-27 Score=233.57 Aligned_cols=239 Identities=20% Similarity=0.190 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+..+++.|+.|+..|+++|||||||||++....++...+ ..++..+++.+ .+.++++.+.+.++|.+ +
T Consensus 28 i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~------~~~~~~p~~~~~A~~qg~lg~~~~~~l~~-----~ 96 (310)
T TIGR00746 28 VRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD------SEVPAMPLDVLGAMSQGMIGYMLQQALNN-----E 96 (310)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc------ccCCCCcchHHHHhhHHHHHHHHHHHHHH-----H
Confidence 467999999999999999999999999998765543322 12456678998 89999999999988765 6
Q ss_pred hhhcCCCCCccc----cceeeccccEEE-EEEcCccCCc------------------ccceeeeE------eeeCHHHHH
Q 010815 86 IRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVVDGV------------------DYGATGEV------KKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~a----~~l~~~d~~~~~-~~~~~~~~~~------------------d~g~~G~v------~~vd~~~I~ 136 (500)
|.++|++.++.. +.++..|..|-. .++.|.+... .+||.-.| +.++.+.|+
T Consensus 97 l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d~~~~~rrvv~sp~p~~iv~~~~I~ 176 (310)
T TIGR00746 97 LPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKEDAGRGWRRVVPSPRPKDIVEAETIK 176 (310)
T ss_pred HHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeecCCCcceEeecCCCchhhccHHHHH
Confidence 778887754443 334444555555 3333433221 12333322 358999999
Q ss_pred HHHhCCCcEEEcCcccC----CC----CCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 137 ERLDGGCLVILSNLGYS----SS----GEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~~~~~~----~~----g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
.||++|+|+|.++-+.. .+ +...|+|+|++|+.+|.+|+||+|||||||||++ +++++|++++.+|+
T Consensus 177 ~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~LIiLTDVdGVy~~~~~p~a~~i~~it~~e~ 256 (310)
T TIGR00746 177 TLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADILVILTDVDAVYINYGKPDEKALREVTVEEL 256 (310)
T ss_pred HHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEEEEEeCCCceeCCCCCCCCcCCcCcCHHHH
Confidence 99999985444432221 12 3345899999999999999999999999999984 46899999999988
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++.++ .|.+||
T Consensus 257 ~~~~~~g-----------------------------------------------------------------~~~tGg-- 269 (310)
T TIGR00746 257 EDYYKAG-----------------------------------------------------------------HFAAGS-- 269 (310)
T ss_pred HHHHhcC-----------------------------------------------------------------CcCCCC--
Confidence 8886321 133444
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceee
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|.+|+++|..+|++|+.++||++ ++. +.+++.++ .||.|.
T Consensus 270 -------M~~Kl~AA~~~~~~g~~~v~I~~---~~~-i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 270 -------MGPKVEAAIEFVESGGKRAIITS---LEN-AVEALEGK-AGTRVT 309 (310)
T ss_pred -------cHHHHHHHHHHHHhCCCeEEEec---hHH-HHHHHCCC-CCcEEe
Confidence 99999999999999988999997 444 45666666 899985
|
The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff. |
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=217.47 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..+|.+|+. ..-.++|||||||+|+|+.+++++++ ...+ +.++..+..++.+|.++|+.+++ +|
T Consensus 26 l~ria~eI~~--~~~~~livVHGgGSFGHp~Ak~~~~~-~~~~---~~s~~G~~~~~~am~~L~~~V~~---------~l 90 (252)
T COG1608 26 LRRIAREISN--GKPEKLIVVHGGGSFGHPAAKEFGLE-GLKN---YLSPLGFSLTHLAMLELNSIVVD---------AL 90 (252)
T ss_pred HHHHHHHHhc--CCcccEEEEecCccccCHHHHHhCcc-cccc---ccCccchHHHHHHHHHHHHHHHH---------HH
Confidence 3455555554 33357999999999999999999993 3222 45678888899999999999999 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCccc-CCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY-SSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~-~~~g~~~~i~~D~ 165 (500)
.+.|++ ++...+.+ +.+ +.|++.....+.|+.+|+.|||||++++++ +.+..+.++|+|+
T Consensus 91 ~~~Gv~----av~~~P~s--~~~-------------~~gr~~~~~l~~i~~~l~~gfvPvl~GDVv~d~~~g~~IiSGDd 151 (252)
T COG1608 91 LDAGVR----AVSVVPIS--FST-------------FNGRILYTYLEAIKDALEKGFVPVLYGDVVPDDDNGYEIISGDD 151 (252)
T ss_pred HhcCCc----cccccCcc--eee-------------cCCceeechHHHHHHHHHcCCEeeeecceEEcCCCceEEEeccH
Confidence 888987 55444433 111 235565667899999999999999998765 4455899999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCcccccc-CHHHHHHHHH-hhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFL-TLQEADSLIR-QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i-~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
++.+||++|+||+++|+|||||++ .+++.++++ ...+++.... .++...
T Consensus 152 Iv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~~gs~~~---------------------------- 203 (252)
T COG1608 152 IVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVALGGSGGT---------------------------- 203 (252)
T ss_pred HHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhhhcCcCcc----------------------------
Confidence 999999999999999999999984 344444444 3445554321 111111
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeee
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLL 322 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~ 322 (500)
..+|| |..||+++....++|.+ |+++||+.|++| .
T Consensus 204 ----------------------------------DVTGG---------i~~Kl~~~~~~~~~~~~-vyi~ng~~~~ni-~ 238 (252)
T COG1608 204 ----------------------------------DVTGG---------IAKKLEALLEIARYGKE-VYIFNGNKPENI-Y 238 (252)
T ss_pred ----------------------------------cchhh---------HHHHHHHHHHHHhcCce-EEEECCCCHHHH-H
Confidence 23344 99999999999999998 999999999986 5
Q ss_pred hhhhcCCCcceee
Q 010815 323 ELFKRDGMGTMVA 335 (500)
Q Consensus 323 ~l~~~~~~GT~i~ 335 (500)
.++.++..||+|.
T Consensus 239 ~~l~G~~vGT~I~ 251 (252)
T COG1608 239 RALRGENVGTRID 251 (252)
T ss_pred HHhcCCCCceEec
Confidence 5566778899985
|
|
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=231.04 Aligned_cols=235 Identities=21% Similarity=0.197 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhh
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
...++.|+.|.. |+++||+||||||++.++.+..... ..++.+|+.+ .++++.++++++++|.+ +|
T Consensus 29 ~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~-------~~~~~pl~~~~a~sqg~iGy~l~q~l~~-----~l 95 (307)
T PRK12354 29 RIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYK-------DVTPYPLDVLGAETEGMIGYMLEQELGN-----LL 95 (307)
T ss_pred HHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhc-------CCCCCCcchhcccccchHHHHHHHHHHH-----Hh
Confidence 367888998988 9999999999999886655443321 1267889998 89999999999998765 45
Q ss_pred hhcCCCCCccccceeeccccEEE-EEEcCccCC----------------cccceeeeEe-------eeCHHHHHHHHhCC
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLA-AKRKGVVDG----------------VDYGATGEVK-------KVDVTRMRERLDGG 142 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~-~~~~~~~~~----------------~d~g~~G~v~-------~vd~~~I~~lL~~g 142 (500)
.+..+.+-+..+-+...|..|.. .++.|++.. .|..+.++|. .++.+.|+.||++|
T Consensus 96 ~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rrVv~SP~P~~ive~~~I~~Ll~~g 175 (307)
T PRK12354 96 PERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRRVVPSPRPKRIVEIRPIRWLLEKG 175 (307)
T ss_pred cCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEEEecCCCCcceeCHHHHHHHHHCC
Confidence 44333322222333344555555 334443322 2333445544 69999999999999
Q ss_pred CcEEEc-----CcccCCCCCee----ecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHHHHHH
Q 010815 143 CLVILS-----NLGYSSSGEVL----NCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 143 ~IPVi~-----~~~~~~~g~~~----~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~~~~~ 208 (500)
+|||++ |+..+..+..+ ++|+|.+|+.||.+|+||+|+|||||||++ |++++|++++.+|++++
T Consensus 176 ~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy~~~~~p~~k~i~~it~~e~~~~-- 253 (307)
T PRK12354 176 HLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVYLDWGKPTQRAIAQATPDELREL-- 253 (307)
T ss_pred CEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcceecCCCCCCCeECCCCCHHHHHhh--
Confidence 998886 77665445444 468999999999999999999999999884 34689999998888766
Q ss_pred hhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhc
Q 010815 209 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 288 (500)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 288 (500)
. |++||
T Consensus 254 -~------------------------------------------------------------------f~~Gg------- 259 (307)
T PRK12354 254 -G------------------------------------------------------------------FAAGS------- 259 (307)
T ss_pred -C------------------------------------------------------------------CCcCC-------
Confidence 1 23344
Q ss_pred ccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeeccc
Q 010815 289 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 289 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
|.+|+++|..++++|.++++|.+ .+. +.+++.++ .||.|.++.
T Consensus 260 --M~pKV~AA~~~~~~gg~~viI~~---~~~-l~~al~G~-~GT~I~~~~ 302 (307)
T PRK12354 260 --MGPKVEAACEFVRATGKIAGIGS---LED-IQAILAGE-AGTRISPET 302 (307)
T ss_pred --hHHHHHHHHHHHHhCCCEEEECC---HHH-HHHHHCCC-CceEEecCC
Confidence 99999999999998888888754 333 45666554 799998744
|
|
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=221.02 Aligned_cols=176 Identities=34% Similarity=0.442 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHH-----HHHHhhCCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRM-----MIEAKLSPG 80 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~-----~i~~~l~~~ 80 (500)
+.+++++|+.+.+.|.++|||||+|++++.+++++++.+++.++.|+|+....... +.++..+|. .+++
T Consensus 19 ~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~~~~~~i~~----- 93 (242)
T PF00696_consen 19 LRELADDIALLSQLGIKVVVVHGGGSFTDELLEKYGIEPKFVDGSRVTDIETGLIITMAAAAELNRDALLDEIVS----- 93 (242)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHCTHTTSEETHHCHBHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHhCCCeEEEEECChhhcCchHHhccCCcccchhhhhhhhhhhHHHHHHHhhccccchhHHHHHH-----
Confidence 78999999999999999999999999999999999999999999999999998887 788888998 7766
Q ss_pred CCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcc-cCCCCCe-
Q 010815 81 PPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG-YSSSGEV- 158 (500)
Q Consensus 81 ~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~-~~~~g~~- 158 (500)
.+..++.+ ++++.+.+.++....+.. ..++.+.|+.+|++|+|||++|.. .+..|+.
T Consensus 94 ----~~~~~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~l~~~~ipVv~g~~~~~~~g~~~ 152 (242)
T PF00696_consen 94 ----AGERLGAH----AVGLSLSDGGISAAKRDA-------------REVDKEAIRELLEQGIIPVVSGFAGIDDDGEVT 152 (242)
T ss_dssp ----HHHHCTHH----EEEHHHTGGTEEEEEEES-------------SEEHHHHHHHHHHTTSEEEEESEEEEETTSTEE
T ss_pred ----hhhhhhHH----HHhhhhhcccchhhhhhh-------------hhhHHHHHHHHHHCCCEEEEeCCcccCCCCCcc
Confidence 35566655 788888888777765421 167899999999999999999987 7888988
Q ss_pred --eecCHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHH
Q 010815 159 --LNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 159 --~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~ 208 (500)
.++++|.+|+.||.+|+|++|+|+|||||+. +++++|++|+.+|++++..
T Consensus 153 ~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~ 211 (242)
T PF00696_consen 153 TLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELAS 211 (242)
T ss_dssp EEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHh
Confidence 9999999999999999999999999999883 3789999999999999874
|
In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A .... |
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-23 Score=206.39 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHcCCeEE-EEECChHHHHHHHHHcCC-Ccee----eCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCC
Q 010815 7 WLVMVQDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGH-EAKY----LGRYRITDSESLAAAMEAAGGIRMMIEAKLSPG 80 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~V-IVHGgG~~i~~~~~~~g~-~~~~----~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~ 80 (500)
+..++++|+.|+..|.++| ++||++++++..+..++. ...+ ..+.++..+..+..-+++...-+..+.+.+.+
T Consensus 33 l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~qa~aa~gq~~L~~~y~~- 111 (284)
T cd04256 33 LASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDMPQMELDGRACAAVGQSGLMALYEA- 111 (284)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCCcchhHHHHHHHHcccHHHHHHHHH-
Confidence 5789999999999999999 899999999999976643 1101 11111111222221122222223344443332
Q ss_pred CCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCC------
Q 010815 81 PPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS------ 154 (500)
Q Consensus 81 ~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~------ 154 (500)
.|.++|++ +..+-.....|...+ ......+.|+.||+.|+|||+++++...
T Consensus 112 ----~f~~~~~~----~~q~llt~~d~~~~~---------------~~~~~~~~l~~lL~~g~iPVi~~nD~v~~~~~~~ 168 (284)
T cd04256 112 ----MFTQYGIT----VAQVLVTKPDFYDEQ---------------TRRNLNGTLEELLRLNIIPIINTNDAVSPPPEPD 168 (284)
T ss_pred ----HHHHcCCc----HHHeeeeccccccHH---------------HHHHHHHHHHHHHHCCCEEEEeCCCccccccccc
Confidence 57778876 222222222222211 1224578999999999999999643322
Q ss_pred -CCCe--eecCHHHHHHHHHHHcCCCEEEEEecCcccC------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhh
Q 010815 155 -SGEV--LNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVA 225 (500)
Q Consensus 155 -~g~~--~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~ 225 (500)
+++. .++|+|++|+.||.+++||+|+|+|||||++ |++++|++++..+.+.+... .
T Consensus 169 ~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~~~~-~-------------- 233 (284)
T cd04256 169 EDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSITFG-T-------------- 233 (284)
T ss_pred ccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHhhcc-c--------------
Confidence 1233 4599999999999999999999999999984 35899999998665444211 0
Q ss_pred cccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcC
Q 010815 226 EEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 305 (500)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 305 (500)
+++ +.+|| |.+||.+|..|.++|
T Consensus 234 -----------------------------------~s~-------------~gtGG---------M~~Kl~Aa~~a~~~G 256 (284)
T cd04256 234 -----------------------------------KSR-------------VGTGG---------MEAKVKAALWALQGG 256 (284)
T ss_pred -----------------------------------ccC-------------cccCC---------cHHHHHHHHHHHHCC
Confidence 011 12333 999999999999999
Q ss_pred CCeEEeeccccCceeeehhhhcCCCcceee
Q 010815 306 VQRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 306 ~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
++ ++|++|+.|+. +..++.++..||.|.
T Consensus 257 i~-v~I~~G~~~~~-i~~~l~G~~~GT~~~ 284 (284)
T cd04256 257 TS-VVITNGMAGDV-ITKILEGKKVGTFFT 284 (284)
T ss_pred Ce-EEEEcCCCccH-HHHHHcCCCCCEEeC
Confidence 97 89999999987 467777778899983
|
G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. |
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.2e-23 Score=211.38 Aligned_cols=223 Identities=20% Similarity=0.253 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.++..|+++||||||+ +...+.++++..++. +.+..+.+. ..-+..++..+.+ +|
T Consensus 32 i~~la~~I~~l~~~g~~vViV~sGa--i~~g~~~l~l~~~~~---~~~~~qa~a--avGq~~L~~~~~~---------~l 95 (372)
T PRK05429 32 IAELARQIAALRAAGHEVVLVSSGA--VAAGRERLGLPERPK---TLAEKQAAA--AVGQSRLMQAYEE---------LF 95 (372)
T ss_pred HHHHHHHHHHHHHCCCeEEEEcccH--hhhhHhhcCCCCCCC---chHHHHHHH--HHhHHHHHHHHHH---------HH
Confidence 5689999999999999999999884 344455677764321 122222111 2223445555555 67
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeC-HHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd-~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
+++|++ +.++...+..|.... ..++ .+.|+.||+.|+|||+++++.....+..++|+|.
T Consensus 96 ~~~gi~----~~qil~t~~d~~~~~----------------~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~~l~~gd~D~ 155 (372)
T PRK05429 96 ARYGIT----VAQILLTRDDLEDRE----------------RYLNARNTLRTLLELGVVPIINENDTVATDEIKFGDNDT 155 (372)
T ss_pred HHCCCC----EEEEEeehhHhhhhh----------------HhhhHHHHHHHHHHCCCEEEEcCCCccceecccccChHH
Confidence 889987 445433333332111 1233 5889999999999999976554445566899999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
+|+.||.+|+||+|+|+|||||++ |++++|++++. +++++++...
T Consensus 156 ~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~~~~-------------------------- 209 (372)
T PRK05429 156 LSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMAGGA-------------------------- 209 (372)
T ss_pred HHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHhcCC--------------------------
Confidence 999999999999999999999983 35899999986 4566664221
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
++. +.+|| |.+||++|..|.++|++ ++|+|++.
T Consensus 210 ------------------------~~~-------------~gtGG---------M~~Kl~aa~~a~~~Gi~-v~I~~g~~ 242 (372)
T PRK05429 210 ------------------------GSG-------------LGTGG---------MATKLEAARIATRAGIP-VVIASGRE 242 (372)
T ss_pred ------------------------CCC-------------cCcCC---------cHHHHHHHHHHHHCCCe-EEEEcCCC
Confidence 011 23344 99999999999999998 99999999
Q ss_pred CceeeehhhhcCCCcceeecccc
Q 010815 317 GGVLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~~d~~ 339 (500)
|+. +.+++.++..||.|.+...
T Consensus 243 ~~~-l~~~l~g~~~GT~i~~~~~ 264 (372)
T PRK05429 243 PDV-LLRLLAGEAVGTLFLPQEK 264 (372)
T ss_pred ccH-HHHHhcCCCCCEEEeeCCc
Confidence 985 5677877888999987543
|
|
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-23 Score=212.70 Aligned_cols=222 Identities=21% Similarity=0.283 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..++++|+.|++.|+++||||||+.+++. .+++.. ++.+++..+++..+ -+..++..+.. .|
T Consensus 29 i~~la~~I~~l~~~G~~vvlVsSGava~G~--~~l~~~----~~~~~~~~qalaav--Gq~~l~~~~~~---------~f 91 (368)
T PRK13402 29 LLGLVQQIVYLKDQGHQVVLVSSGAVAAGY--HKLGFI----DRPSVPEKQAMAAA--GQGLLMATWSK---------LF 91 (368)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCChhhcCc--cccCCC----CCCCccHHHHHHHh--hHHHHHHHHHH---------HH
Confidence 568999999999999999999999988776 344432 22356666665555 22224455555 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+++|++ +.++...+..|...+ .| . .+ .++|+.||+.|+|||+++++.....+..+.|+|++
T Consensus 92 ~~~g~~----~aqvLlT~~d~~~~~--------~y---~---n~-~~~l~~LL~~g~IPIinenD~v~~~el~~GdnD~l 152 (368)
T PRK13402 92 LSHGFP----AAQLLLTHGDLRDRE--------RY---I---NI-RNTINVLLERGILPIINENDAVTTDRLKVGDNDNL 152 (368)
T ss_pred HHCCCe----EEEEEEecchhhhHH--------HH---H---HH-HHHHHHHHHCCcEEEEeCCCcEeecccccCChHHH
Confidence 888987 433322222221110 00 0 01 37999999999999999865555566778899999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC---C----CCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 167 ATACALAIEADKLICIIDGPILD---E----SGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
|+.+|.+|+||.|+|+|||||++ | ++++|++|+. +++..+...
T Consensus 153 Aa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l~~~---------------------------- 204 (368)
T PRK13402 153 SAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAMAGG---------------------------- 204 (368)
T ss_pred HHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHHhcc----------------------------
Confidence 99999999999999999999983 3 5899999975 444444211
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
.++++++ || |.+||+||..|.++|++ ++|++++.|
T Consensus 205 ----------------------~~s~~gt-------------GG---------M~~Kl~Aa~~a~~~gi~-v~I~~g~~~ 239 (368)
T PRK13402 205 ----------------------AGSNVGT-------------GG---------MRTKIQAAKIAMSHGIE-TFIGNGFTA 239 (368)
T ss_pred ----------------------cccCcCc-------------CC---------chHHHHHHHHHHHcCCc-EEEEcCCCc
Confidence 0112223 33 99999999999999998 889999999
Q ss_pred ceeeehhhhcCCCcceeeccc
Q 010815 318 GVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~~d~ 338 (500)
+. +.+++.++..||.|.+..
T Consensus 240 ~~-l~~~l~g~~~GT~i~~~~ 259 (368)
T PRK13402 240 DI-FNQLLKGQNPGTYFTPEE 259 (368)
T ss_pred hH-HHHHhcCCCCceEEecCC
Confidence 85 567777778899997754
|
|
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=195.43 Aligned_cols=174 Identities=17% Similarity=0.221 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEC-ChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH-HHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM-IEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHG-gG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~-i~~~l~~~~~~~ 84 (500)
+.+++++|+.++..|+++||||| +|+.++.+++..+....+ .+...++++......+|.. +.+
T Consensus 17 ~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~~~------~~~~~~~~i~~~Ge~~~~~~~~~--------- 81 (239)
T cd04246 17 IKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVSPR------PSPRELDMLLSTGEQISAALLAM--------- 81 (239)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhccC------CCHHHHHHHHHHhHHHHHHHHHH---------
Confidence 67899999999999999999888 688999988877765443 2566677664433356655 444
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeec--
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i-- 161 (500)
.|+++|++ ++++++.+..+++..+. + .|.+..++.+.|+.++++|+|||+++. +.+.+++++++
T Consensus 82 ~l~~~g~~----a~~l~~~~~~l~~~~~~--------~-~~~~~~~~~~~l~~ll~~g~ipVi~g~~~~~~~g~~~~l~~ 148 (239)
T cd04246 82 ALNRLGIK----AISLTGWQAGILTDDHH--------G-NARIIDIDPKRILEALEEGDVVVVAGFQGVNEDGEITTLGR 148 (239)
T ss_pred HHHhCCCC----eEEeccccCCEEecCCC--------C-ceeechhhHHHHHHHHhcCCEEEEcCccccCCCCCEEecCC
Confidence 57899988 88999988777775432 1 477888899999999999999999996 66778899999
Q ss_pred -CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHH
Q 010815 162 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 162 -~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~ 208 (500)
|+|.+|+.||.+|+|++|+|+|||||++ +++++|++++.+|+++++.
T Consensus 149 g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~ 203 (239)
T cd04246 149 GGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMAS 203 (239)
T ss_pred CChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHh
Confidence 8999999999999999999999999984 3689999999999888853
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati |
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=200.51 Aligned_cols=218 Identities=19% Similarity=0.202 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECC-hHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGg-G~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.++++.|+.++..|+++|||||| +++.+. .+++..++ ......+.+ ..-+..++..+..
T Consensus 23 i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~---~~~~~~~~------~~~~~~~~~~~~Gq~~l~~~~~~--------- 84 (251)
T cd04242 23 LASLVEQIAELRNQGKEVILVSSGAVAAGRQ---RLGLEKRP------KTLPEKQALAAVGQSLLMALYEQ--------- 84 (251)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCchhhChh---hhccCcCC------CchhHHHHHHHHhHHHHHHHHHH---------
Confidence 568899999999999999999965 454432 34443221 011122222 2222334444444
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|+++|++ +..+...+..|...+ ......+.|+.||+.|+|||+++++....++..++|+|
T Consensus 85 ~l~~~Gi~----~~q~l~t~~~~~~~~---------------~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~~~~~~~~D 145 (251)
T cd04242 85 LFAQYGIK----VAQILLTRDDFEDRK---------------RYLNARNTLETLLELGVIPIINENDTVATEEIRFGDND 145 (251)
T ss_pred HHHHcCCe----EEEEEEehhHhcchH---------------HHHHHHHHHHHHHHCCCEEEEcCCCCeeeeccccCChH
Confidence 67889987 444333343333221 01112688999999999999997544333456688999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccC--HHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT--LQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
.+|+.||.+|+||+|+|+|||||++ |++++|++++ .++++++.....
T Consensus 146 ~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~------------------------ 201 (251)
T cd04242 146 RLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAGGSG------------------------ 201 (251)
T ss_pred HHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhcccC------------------------
Confidence 9999999999999999999999983 3589999999 777777641100
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
+ .+.+|| |.+|+++|..+.++|++ ++|+|++
T Consensus 202 --------------------------~-------------~~~tgg---------m~~Kl~a~~~a~~~gi~-v~I~~g~ 232 (251)
T cd04242 202 --------------------------S-------------SVGTGG---------MRTKLKAARIATEAGIP-VVIANGR 232 (251)
T ss_pred --------------------------c-------------CcccCC---------cHHHHHHHHHHHHCCCc-EEEEcCC
Confidence 0 133444 99999999999999998 9999999
Q ss_pred cCceeeehhhhcCCCcceee
Q 010815 316 IGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 316 ~~~~ll~~l~~~~~~GT~i~ 335 (500)
.|+. +.+++.++..||.|.
T Consensus 233 ~~~~-i~~~l~g~~~GT~i~ 251 (251)
T cd04242 233 KPDV-LLDILAGEAVGTLFL 251 (251)
T ss_pred CCCH-HHHHHcCCCCCeEeC
Confidence 9985 567777778899884
|
G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir |
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-22 Score=194.49 Aligned_cols=174 Identities=17% Similarity=0.215 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECC-hHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGg-G~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.++..|+++|||||| |..+..++... .... +.++...++++......+|..+... .
T Consensus 17 ~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~-~~~~-----~~~~~~~~~~i~a~Ge~~~~~l~~~--------~ 82 (239)
T cd04261 17 IKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELA-KEIS-----PRPPARELDVLLSTGEQVSIALLAM--------A 82 (239)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHH-HHhc-----cCCCHHHHHHHHHHHHHHHHHHHHH--------H
Confidence 678999999999999999999997 67777666542 2111 3456777777655555777775333 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeec---
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC--- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i--- 161 (500)
|+++|++ ++++++.+..+++..+. ..|++..++.+.|+.++++|+|||+++. +.+.++.++++
T Consensus 83 l~~~g~~----a~~l~~~~~~l~~~~~~---------~~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~~~~g~~~~l~rg 149 (239)
T cd04261 83 LNRLGIK----AISLTGWQAGILTDGHH---------GKARIIDIDPDRIRELLEEGDVVIVAGFQGINEDGDITTLGRG 149 (239)
T ss_pred HHhCCCC----eEEechhhCCEEecCCC---------CcceechhhHHHHHHHHHcCCeEEEcCccccCCCCCEEecCCC
Confidence 7899998 89999998877775432 1577888899999999999999999998 77888999999
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHHH
Q 010815 162 NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLI 207 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~~ 207 (500)
|+|.+|+.+|.+|+||+|+++|||||++ | ++++|++++.+|++++.
T Consensus 150 ~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~ 202 (239)
T cd04261 150 GSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMA 202 (239)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHH
Confidence 9999999999999999999999999984 2 58899999999988875
|
In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and |
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=192.74 Aligned_cols=175 Identities=17% Similarity=0.199 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEE-----CChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHH--HHHHhhCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM--MIEAKLSP 79 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVH-----GgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~--~i~~~l~~ 79 (500)
+.+++++|+.+...|.++|||| |||++++..+.+.+... +.|+|+ ..++.+ .+.|+++. .+++
T Consensus 17 ~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~----~~~~t~-~~~~~~-~~~Ge~~~~~~~~~---- 86 (244)
T cd04260 17 REQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE----NSDISP-RELDLL-MSCGEIISAVVLTS---- 86 (244)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh----cCCCCH-HHHHHH-HHHhHHHHHHHHHH----
Confidence 4689999999999999877777 78888888777665332 346666 456666 44666665 3655
Q ss_pred CCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCe
Q 010815 80 GPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEV 158 (500)
Q Consensus 80 ~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~ 158 (500)
.|+++|++ ++++++.+.++++.... + .|.+..++.+.|+.+|+.|+|||+++. +.+.+|+.
T Consensus 87 -----~l~~~Gi~----a~~l~~~~~~lit~~~~--------~-~~~v~~~~~~~l~~ll~~g~VPVv~g~~~~~~~g~~ 148 (244)
T cd04260 87 -----TLRAQGLK----AVALTGAQAGILTDDNY--------S-NAKIIKVNPKKILSALKEGDVVVVAGFQGVTEDGEV 148 (244)
T ss_pred -----HHHhCCCC----eEEechHHcCEEecCCC--------C-ceeeeccCHHHHHHHHhCCCEEEecCCcccCCCCCE
Confidence 57899998 99999999888876532 1 477888999999999999999999997 77888999
Q ss_pred eec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHh
Q 010815 159 LNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 209 (500)
Q Consensus 159 ~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~ 209 (500)
+++ ++|.+|+.||.+|+|++++|+|||||++ +++++|++|+.+|+++++..
T Consensus 149 ~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~ 209 (244)
T cd04260 149 TTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQ 209 (244)
T ss_pred EEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHc
Confidence 999 6999999999999999999999999984 36899999999999998643
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet |
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=198.30 Aligned_cols=223 Identities=20% Similarity=0.277 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..++++|+.|+..|+++|||.+|.-.. -+..+|++.+.. ....++++..+ |. ..+.+..++ .|
T Consensus 30 l~~l~~~ia~L~~~G~eVilVSSGAiaa--G~~~Lg~~~rp~---~l~~kQA~AAV----GQ--~~Lm~~y~~-----~f 93 (369)
T COG0263 30 LEELVRQVAALHKAGHEVVLVSSGAIAA--GRTRLGLPKRPK---TLAEKQAAAAV----GQ--VRLMQLYEE-----LF 93 (369)
T ss_pred HHHHHHHHHHHHhCCCEEEEEccchhhh--ChhhcCCCCCCc---chHHHHHHHHh----CH--HHHHHHHHH-----HH
Confidence 5789999999999999999999995444 457788876542 12223333322 21 122222221 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeC-HHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd-~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
..+|+. ...+.++-.| |.. +. +..| .++|+.||+.|.|||+++++.....++.+.|+|.
T Consensus 94 ~~~g~~--v~QiLLTr~D--~~~--r~--------------ry~Nar~Tl~~Ll~~gvVPIINENDtva~~EikfGDND~ 153 (369)
T COG0263 94 ARYGIK--VGQILLTRDD--FSD--RR--------------RYLNARNTLSALLELGVVPIINENDTVATEEIKFGDNDT 153 (369)
T ss_pred HhcCCe--eeEEEeehhh--hhh--HH--------------HHHHHHHHHHHHHHCCceeeecCCCceeeeeeeecCCch
Confidence 788876 3344455443 111 11 1122 7899999999999999999999889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCccc-------CCCCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 166 VATACALAIEADKLICIIDGPIL-------DESGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv-------~~~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
+++.+|...+||.|++|||+||+ +|+.++|++++. +|++.+.. +
T Consensus 154 LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~~ag-g-------------------------- 206 (369)
T COG0263 154 LSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEAMAG-G-------------------------- 206 (369)
T ss_pred HHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHHHhc-C--------------------------
Confidence 99999999999999999999998 356788888763 24444421 0
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
-++.+++| | |.+||.||..|+++|++ +.|.+|+.
T Consensus 207 -----------------------sgs~~GTG-G---------------------M~TKl~AA~iA~~aG~~-~iI~~g~~ 240 (369)
T COG0263 207 -----------------------SGSELGTG-G---------------------MRTKLEAAKIATRAGVP-VIIASGSK 240 (369)
T ss_pred -----------------------CCCCCCcc-c---------------------HHHHHHHHHHHHHcCCc-EEEecCCC
Confidence 02223354 4 99999999999999998 88999999
Q ss_pred CceeeehhhhcCCCcceeecccc
Q 010815 317 GGVLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~~d~~ 339 (500)
|+. +.++..++..||.|.+...
T Consensus 241 ~~~-i~~~~~~~~~GT~F~~~~~ 262 (369)
T COG0263 241 PDV-ILDALEGEAVGTLFEPQAK 262 (369)
T ss_pred cch-HHHHHhCCCCccEEecCCc
Confidence 985 4677778889999986553
|
|
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=197.02 Aligned_cols=220 Identities=19% Similarity=0.174 Sum_probs=149.5
Q ss_pred cHHHHHHHHHHHHHcCCeEEEE-ECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCc
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLV-PGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPI 83 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIV-HGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~ 83 (500)
.+.++++.|+.++..|+++||| ||++.+++.++.....+ .+....+.+ ..-+..++..+..
T Consensus 32 ~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~~---------~~~~~~~a~aa~Gq~~l~~~~~~-------- 94 (266)
T PRK12314 32 RIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKRP---------TSLAEKQALAAVGQPELMSLYSK-------- 94 (266)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccCC---------CCHHHHHHHHHHhHHHHHHHHHH--------
Confidence 4678999999999999998885 99999988666433221 122233333 3333444444444
Q ss_pred hhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCccc---CCCCCeee
Q 010815 84 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY---SSSGEVLN 160 (500)
Q Consensus 84 ~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~---~~~g~~~~ 160 (500)
+|+++|++ ...+-++ +..|-. ..+.....+.|+.||+.|+|||+++++. +..+ ..+
T Consensus 95 -~~~~~g~~--~~q~llT--~~~~~~---------------~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~~~-~~~ 153 (266)
T PRK12314 95 -FFAEYGIV--VAQILLT--RDDFDS---------------PKSRANVKNTFESLLELGILPIVNENDAVATDEID-TKF 153 (266)
T ss_pred -HHHHcCCe--EEEEEEe--cccccc---------------hHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecccc-cee
Confidence 67888886 1112111 112211 1122334789999999999999996433 2223 346
Q ss_pred cCHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhcccccc
Q 010815 161 CNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITC 231 (500)
Q Consensus 161 i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (500)
.|+|.+|++||.+|+||+|+|+|||||++ |++++|+.|+. .+..++... .
T Consensus 154 ~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~~~-~-------------------- 212 (266)
T PRK12314 154 GDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALAGG-A-------------------- 212 (266)
T ss_pred cchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHhcc-C--------------------
Confidence 78999999999999999999999999984 35788888863 232222110 0
Q ss_pred cCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEe
Q 010815 232 FGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHL 311 (500)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 311 (500)
++. +.+|| |.+|+++|..|.++|++ ++|
T Consensus 213 -----------------------------~~~-------------~~tGG---------M~~Kl~aa~~a~~~gv~-v~I 240 (266)
T PRK12314 213 -----------------------------GSK-------------FGTGG---------MVTKLKAAKFLMEAGIK-MVL 240 (266)
T ss_pred -----------------------------CCC-------------cccCc---------hHHHHHHHHHHHHCCCe-EEE
Confidence 011 22334 99999999999999998 999
Q ss_pred eccccCceeeehhhhcCCCcceeecc
Q 010815 312 LDGTIGGVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 312 ~~~~~~~~ll~~l~~~~~~GT~i~~d 337 (500)
+||+.|+.+ .+++.++..||.|.+.
T Consensus 241 ~~g~~~~~i-~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 241 ANGFNPSDI-LDFLEGESIGTLFAPK 265 (266)
T ss_pred EcCCCchHH-HHHHcCCCCceEEccC
Confidence 999999874 6777777889999763
|
|
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=191.39 Aligned_cols=218 Identities=16% Similarity=0.177 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..+++.|+.|+. ++++||||||+-..++ .++++..+. ....++++ ..-+..++....+ .|
T Consensus 31 ~~~l~~~i~~l~~-~~~vilVssGava~g~--~~~~~~~~~-----~~~~qa~a--aiGq~~L~~~y~~---------~f 91 (264)
T PTZ00489 31 IEALCRFIADLQT-KYEVILVTSGAVAAGY--TKKEMDKSY-----VPNKQALA--SMGQPLLMHMYYT---------EL 91 (264)
T ss_pred HHHHHHHHHHHhc-CCeEEEEecChHhcCh--hhcCCCccc-----cHHHHHHH--HhCHHHHHHHHHH---------HH
Confidence 5678889998886 7999999988743332 244444211 01111111 2222335665655 56
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
.++|++ +..+.++..| +-. ++ . .....+.|+.||+.|+|||+++++..+..++.+.|+|.+
T Consensus 92 ~~~~~~--~aqiLlt~~d--~~~-~~-~-------------~~n~~~~l~~lL~~g~VPIinend~~~~~e~~~gdnD~l 152 (264)
T PTZ00489 92 QKHGIL--CAQMLLAAYD--LDS-RK-R-------------TINAHNTIEVLISHKVIPIINENDATALHELVFGDNDRL 152 (264)
T ss_pred HhCCCe--EEEeeeeccc--ccc-ch-h-------------hHHHHHHHHHHHHCCCEEEECCCCCcccceeEeCChHHH
Confidence 788886 1222222222 111 00 0 012488999999999999999998887778999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC---C----CCcc---ccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 167 ATACALAIEADKLICIIDGPILD---E----SGHL---IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~---I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
|+.||..++||+|+|+|||||++ | ++++ |++++.+++.... +.
T Consensus 153 Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~~~--~~------------------------- 205 (264)
T PTZ00489 153 SALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVAEA--TP------------------------- 205 (264)
T ss_pred HHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHHhc--Cc-------------------------
Confidence 99999999999999999999984 2 3444 6777766553221 00
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
.+ .+++|| |.+||.+|..|.+.|++ ++|++|+.
T Consensus 206 ------------------------~~-------------~~~tGG---------M~~Kl~aa~~a~~~Gi~-v~I~~g~~ 238 (264)
T PTZ00489 206 ------------------------NN-------------RFATGG---------IVTKLQAAQFLLERGGK-MYLSSGFH 238 (264)
T ss_pred ------------------------CC-------------CcccCC---------hHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 00 123344 99999999999999997 88999999
Q ss_pred CceeeehhhhcC--CCcceeecc
Q 010815 317 GGVLLLELFKRD--GMGTMVASD 337 (500)
Q Consensus 317 ~~~ll~~l~~~~--~~GT~i~~d 337 (500)
|+.+ ..++.++ ..||.|.+.
T Consensus 239 ~~~i-~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 239 LEKA-RDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred chHH-HHHHcCCCCCCceEEeec
Confidence 9865 5555433 379999764
|
|
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=200.94 Aligned_cols=223 Identities=17% Similarity=0.214 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++.|+.++..|+++|||||||... .+..++++.++. +++....+. ..-+..++..+.+ .|
T Consensus 24 i~~la~~I~~l~~~g~~vvlV~sG~~~~--g~~~lg~~~~~~---~l~~~qa~a--a~Gq~~l~~~~~~---------~l 87 (363)
T TIGR01027 24 IAELVEQVAALHAAGHEVVIVSSGAIAA--GFEALGLPERPK---TLAEKQALA--AVGQVRLMQLYEQ---------LF 87 (363)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCcHHhc--CccccCCCCCcc---chHHHHHHH--HhChHHHHHHHHH---------HH
Confidence 6789999999999999999999998432 344556554321 111222222 2223344455545 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeC-HHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd-~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
.++|++ +..+......|... ....| .++|+.||+.|+|||+++.+.....+..+.|+|.
T Consensus 88 ~~~Gi~----~aqillt~~d~~~~----------------~~~lna~~~i~~Ll~~g~iPVi~end~v~~~~l~~gd~D~ 147 (363)
T TIGR01027 88 SQYGIK----VAQILLTRADFSDR----------------ERYLNARNTLEALLELGVVPIINENDTVATEEIKFGDNDT 147 (363)
T ss_pred HHcCCe----EEEEEEeccchhhH----------------HHHHHHHHHHHHHHhCCCEEEEeCCCceeeeecCcCChHH
Confidence 788887 32221111111110 01123 3899999999999999975544334455679999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHH-HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQE-ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
+|+.||.+|+||+|+|+|||||++ |++++|++++..+ ....+..+.
T Consensus 148 lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~-------------------------- 201 (363)
T TIGR01027 148 LSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDS-------------------------- 201 (363)
T ss_pred HHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCC--------------------------
Confidence 999999999999999999999983 3468999997532 222221110
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
++ ++.+|| |.+||+||..|.+.|++ ++|+|++.|
T Consensus 202 -----------------------~~-------------~~gtGG---------M~~Kl~Aa~~a~~~gi~-v~I~~g~~~ 235 (363)
T TIGR01027 202 -----------------------GS-------------SVGTGG---------MRTKLQAADLATRAGVP-VIIASGSKP 235 (363)
T ss_pred -----------------------Cc-------------CcCcCC---------chHHHHHHHHHHHCCCe-EEEEeCCCc
Confidence 01 133444 99999999999999998 899999999
Q ss_pred ceeeehhhhcCCCcceeeccc
Q 010815 318 GVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~~d~ 338 (500)
+. +..++.++..||.|.+..
T Consensus 236 ~~-l~~~l~g~~~GT~i~~~~ 255 (363)
T TIGR01027 236 EK-IADALEGAPVGTLFHAQA 255 (363)
T ss_pred cH-HHHHhcCCCCcEEEeeCC
Confidence 75 567777777899998743
|
Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family. |
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=171.49 Aligned_cols=144 Identities=38% Similarity=0.734 Sum_probs=136.1
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 420 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~G 420 (500)
.+|.|+..|++.|.+|+.++..++...+++.+.+...+..|++++.+|.++||+++.++.....+++.+++|+|+||++|
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~G 81 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGSG 81 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCCC
Confidence 58999999999999999999999999999999999999999999999999999999987778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhccc-CCceEEEE
Q 010815 421 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMK 484 (500)
Q Consensus 421 iG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~-~~s~~~~k 484 (500)
+|..|+.+++..|++.|++++++.++.+..||+++||+.++.+.+|...++.|++. +.+++.+.
T Consensus 82 ~G~~Ll~~~~~~Ar~~gi~~lf~LTt~~~~~F~~~GF~~vd~~~LP~~~~~~~~~~~~~~~~~~~ 146 (153)
T COG1246 82 RGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVDKDELPEEVWSSYNFCERRSKCLAF 146 (153)
T ss_pred cHHHHHHHHHHHHHHcCCceeeeeecccHHHHHHcCCeECccccCCHHHHHHHHhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 66655443
|
|
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=175.75 Aligned_cols=161 Identities=19% Similarity=0.200 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHH-HHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME-AAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~-~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.+ ..|+++||||||++.++..+.++. .+. ....+|..+... .
T Consensus 17 ~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~-------------------~~~s~Ge~~~~~l~~~--------~ 68 (227)
T cd04234 17 IKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------------LLLSFGERLSARLLAA--------A 68 (227)
T ss_pred HHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH-------------------HHHHHHHHHHHHHHHH--------H
Confidence 67899999998 889999999999988877765543 233 334456555443 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhC-CCcEEEcC-cccCCCCCeeec--
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG-GCLVILSN-LGYSSSGEVLNC-- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~-g~IPVi~~-~~~~~~g~~~~i-- 161 (500)
|+++|++ +..+++.+..+... ++++.+.+..++.+.|+.+++. |+|||+++ ++.+.+|+++++
T Consensus 69 l~~~Gi~----a~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~~~g~~~~l~r 135 (227)
T cd04234 69 LRDRGIK----ARSLDARQAGITTD---------DNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLGR 135 (227)
T ss_pred HHHCCCC----eEEeCHHHCCEEcC---------CccchhhHHHHHHHHHHHHHhhCCCEEEecCceecCCCCCEEEeeC
Confidence 7899988 77887776554443 2335666778899999999999 99999999 576778888888
Q ss_pred -CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHH
Q 010815 162 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 162 -~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~ 208 (500)
++|.+|+.+|.+|+||+|+|+|||||++ +++++|++++.+|++++..
T Consensus 136 g~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~ 190 (227)
T cd04234 136 GGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAY 190 (227)
T ss_pred CCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHh
Confidence 7999999999999999999999999984 2588999999999988864
|
AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.6e-20 Score=203.69 Aligned_cols=232 Identities=16% Similarity=0.117 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHcCCeEEE-EECChHHHHHHHHHcCCCceeeC-CccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVL-VPGTHVQIDKLLSERGHEAKYLG-RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VI-VHGgG~~i~~~~~~~g~~~~~~~-g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.|+..|+++|| +||++.+++..+...+....... -.+.++..... +++......|....+.
T Consensus 31 l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~q---a~aa~gq~~L~~~y~~----- 102 (715)
T TIGR01092 31 LGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPELDGK---ACAAVGQSGLMALYET----- 102 (715)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchHHHH---HHHHHHHHHHHHHHHH-----
Confidence 67899999999999999988 89999999988866544311110 00112222222 2222222333332222
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCC-------C
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSG-------E 157 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g-------~ 157 (500)
.|..+++. +..+-++ +.+|-.. .......+.|+.||+.|+|||+++++..... .
T Consensus 103 ~f~~~~i~--~aQ~Llt--~~d~~~~---------------~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~~ 163 (715)
T TIGR01092 103 MFTQLDIT--AAQILVT--DLDFRDE---------------QFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSDSQ 163 (715)
T ss_pred HHHHcCCe--eEEEEec--hhhcccH---------------HHHHHHHHHHHHHHHCCCEEEEcCCCccccccccccccc
Confidence 45666654 1111111 1111110 0112357899999999999999974443211 2
Q ss_pred eeecCHHHHHHHHHHHcCCCEEEEEecCcccC------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccc
Q 010815 158 VLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC 231 (500)
Q Consensus 158 ~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (500)
-+++|+|.+|+.||.+|+||+|+|+|||||++ +++++|++++..+.+..+..+.
T Consensus 164 g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~-------------------- 223 (715)
T TIGR01092 164 GIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGT-------------------- 223 (715)
T ss_pred ceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCc--------------------
Confidence 24899999999999999999999999999984 3588999998655442221110
Q ss_pred cCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEe
Q 010815 232 FGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHL 311 (500)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 311 (500)
.+ .+++|| |.+||++|..|.++|++ ++|
T Consensus 224 -----------------------------~~-------------~~~tGG---------M~~Kl~aa~~a~~~gi~-v~I 251 (715)
T TIGR01092 224 -----------------------------KS-------------RLGRGG---------MTAKVKAAVWAAYGGTP-VII 251 (715)
T ss_pred -----------------------------cc-------------ccCCCC---------chHHHHHHHHHHHCCCe-EEE
Confidence 00 123344 99999999999999998 999
Q ss_pred eccccCceeeehhhhcCCCcceeeccc
Q 010815 312 LDGTIGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 312 ~~~~~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
++|+.++. +..++.++..||.|.++.
T Consensus 252 ~~g~~~~~-l~~~l~g~~~GT~~~~~~ 277 (715)
T TIGR01092 252 ASGTAPKN-ITKVVEGKKVGTLFHEDA 277 (715)
T ss_pred eCCCCcch-HHHHhcCCCCceEecccc
Confidence 99999986 567777778899998753
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-19 Score=174.95 Aligned_cols=150 Identities=19% Similarity=0.188 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..++++|+.+.. +++++||||||++.+... ++++... .+...++.+.+++..+|..+++. .|
T Consensus 50 i~~la~~i~~~~~-~~~vilV~GGG~~~r~~~-~~~~~~g-------~~~~~~~~~~~aa~~ln~lv~~~--------~l 112 (262)
T cd04255 50 VLPLVEEIVALRP-EHKLLILTGGGTRARHVY-SIGLDLG-------MPTGVLAKLGASVSEQNAEMLAT--------LL 112 (262)
T ss_pred HHHHHHHHHHHhC-CCcEEEEECCHHHHHHHH-HHHHHcC-------CCchHHHHHHHHHHHHHHHHHHH--------HH
Confidence 5688999998876 789999999999996433 2222111 12334555677788888877753 35
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCccc-------CCCCCee
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY-------SSSGEVL 159 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~-------~~~g~~~ 159 (500)
..+|++ ++ ...+...|+.+|+.|+|||++++.. +..|...
T Consensus 113 ~~~g~~----~i-----------------------------~~~~~~~l~~lL~~g~vPVi~g~~~~~~~~i~~~~g~~~ 159 (262)
T cd04255 113 AKHGGS----KV-----------------------------GHGDLLQLPTFLKAGRAPVISGMPPYGLWEHPAEEGRIP 159 (262)
T ss_pred HHcCCC----cc-----------------------------ccccHHHHHHHHHCCCeEEEeCCcCCCeeeecCCCccCC
Confidence 566765 21 1125667999999999999998732 1224467
Q ss_pred ecCHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHH
Q 010815 160 NCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSL 206 (500)
Q Consensus 160 ~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~ 206 (500)
+.|+|++|+.+|.+|+||+|+++|||||++ +++++|++++.+++.++
T Consensus 160 ~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~ 213 (262)
T cd04255 160 PHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKK 213 (262)
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHH
Confidence 999999999999999999999999999984 36899999998776555
|
The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=170.22 Aligned_cols=199 Identities=18% Similarity=0.134 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHH-cCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~-~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.++..|+++|||||||++++.+... .++ +..+++....+...+|..+... .
T Consensus 25 i~~~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~ll~~--------~ 85 (231)
T PRK00358 25 LDRIAEEIKEVVELGVEVAIVVGGGNIFRGYIGAAAGM-----------DRATADYMGMLATVMNALALQD--------A 85 (231)
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHhhcCC-----------ChhhHHHHHHHHHHHHHHHHHH--------H
Confidence 5688999999999999999999999998776432 222 2234566655667788854443 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+.+|++ +..++...- ++.+. ....+.+..+|++|+|||+++-. +. .+.++|.
T Consensus 86 l~~~Gi~----a~~~~~~~~----------------~~~~~--~~~~~~~~~~l~~g~vPVv~g~~----~~-~~~ssD~ 138 (231)
T PRK00358 86 LERAGVD----TRVQSAIPM----------------PQVAE--PYIRRRAIRHLEKGRVVIFAAGT----GN-PFFTTDT 138 (231)
T ss_pred HHHcCCC----eEEechhhc----------------ccccC--cccHHHHHHHHHCCCEEEEECCC----CC-CCCCchH
Confidence 7888887 321111110 11111 12456788999999999997522 22 2468999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.||.+|+||+++|+|||||++ |++++|++|+.+|+.+. +.
T Consensus 139 ~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g~--------------------------- 188 (231)
T PRK00358 139 AAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---GL--------------------------- 188 (231)
T ss_pred HHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---CC---------------------------
Confidence 999999999999999999999983 36899999987764332 11
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
...++.++..|.++|++ ++|+|+..|+
T Consensus 189 ----------------------------------------------------~~~d~~a~~~a~~~~i~-v~I~~g~~~~ 215 (231)
T PRK00358 189 ----------------------------------------------------KVMDATAISLARDNKIP-IIVFNMNKPG 215 (231)
T ss_pred ----------------------------------------------------cchhHHHHHHHHHcCCc-EEEECCCCch
Confidence 22367777778889997 8999999998
Q ss_pred eeeehhhhcCCCcceee
Q 010815 319 VLLLELFKRDGMGTMVA 335 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~ 335 (500)
.+ ..++.++..||.|.
T Consensus 216 ~l-~~~l~g~~~GT~i~ 231 (231)
T PRK00358 216 NL-KRVVKGEHIGTLVS 231 (231)
T ss_pred HH-HHHHCCCCCCEEeC
Confidence 75 56667777899873
|
|
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-19 Score=170.74 Aligned_cols=199 Identities=17% Similarity=0.136 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHH-HHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~-i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+..+++.|+.+...|+++|||||||++ .|....++++.. ..++....+...+|..+.+. .
T Consensus 23 i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~l~~~--------~ 83 (229)
T cd04239 23 LKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMPR-----------ATADYIGMLATVMNALALQD--------A 83 (229)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCCh-----------hhHHHHHHHHHHHHHHHHHH--------H
Confidence 567888888888889999999999985 565544544331 22344444445677777653 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|.++|++ +..+++.+-... ....+.+.|..+++.|+|||+++.. |. .+.++|.
T Consensus 84 l~~~Gi~----a~~~~~~~~~~~------------------~~~~~~~~l~~~l~~g~ipVi~g~~----g~-~~~~sD~ 136 (229)
T cd04239 84 LEKLGVK----TRVMSAIPMQGV------------------AEPYIRRRAIRHLEKGRIVIFGGGT----GN-PGFTTDT 136 (229)
T ss_pred HHHcCCC----EEEeCHHHHhhh------------------hccccHHHHHHHHhCCCEEEEeCcc----CC-CCCCcHH
Confidence 7888987 555554432110 1234788999999999999999775 22 2458999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.||.+|+||+|+|+|||||++ | ++++|++|+.+|+.++..
T Consensus 137 ~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~------------------------------ 186 (229)
T cd04239 137 AAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL------------------------------ 186 (229)
T ss_pred HHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc------------------------------
Confidence 999999999999999999999984 2 589999999877766531
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
+..++.++..+.+.|++ ++|+|++.|+
T Consensus 187 ----------------------------------------------------~~~~~~a~~~~~~~~i~-v~I~~g~~~~ 213 (229)
T cd04239 187 ----------------------------------------------------KVMDATALTLCRRNKIP-IIVFNGLKPG 213 (229)
T ss_pred ----------------------------------------------------CCccHHHHHHHHHCCCe-EEEECCCChh
Confidence 22335566667888886 8999999998
Q ss_pred eeeehhhhcCCCcceee
Q 010815 319 VLLLELFKRDGMGTMVA 335 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~ 335 (500)
.+ .+++.++..||.|.
T Consensus 214 ~l-~~~l~g~~~GT~i~ 229 (229)
T cd04239 214 NL-LRALKGEHVGTLIE 229 (229)
T ss_pred HH-HHHHcCCCCCeEeC
Confidence 74 67777777899874
|
Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als |
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-19 Score=184.31 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEE-----CChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH--HHHhhCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM--IEAKLSP 79 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVH-----GgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~--i~~~l~~ 79 (500)
..+++++|+.+...|+++|||| ||||+++..+..+..... +.+++..++.+ .++|+++.. +.+
T Consensus 19 ~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~-----~~~~~~~~~~l-~~~Ge~~s~~~~~~---- 88 (403)
T PRK08210 19 RKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF-----SEISKREQDLL-MSCGEIISSVVFSN---- 88 (403)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc-----cCCChHHHHHH-HhHhHHHHHHHHHH----
Confidence 4688999999999999999888 677778777765544322 23455666554 677777765 444
Q ss_pred CCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCe
Q 010815 80 GPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEV 158 (500)
Q Consensus 80 ~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~ 158 (500)
.|+++|++ +..+++.+..+++.++.+ .|++..++.+.|+.+++.|+|||+++. +.+.+|+.
T Consensus 89 -----~l~~~Gi~----a~~l~~~~~~~~t~~~~~---------~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~~~~g~~ 150 (403)
T PRK08210 89 -----MLNENGIK----AVALTGGQAGIITDDNFT---------NAKIIEVNPDRILEALEEGDVVVVAGFQGVTENGDI 150 (403)
T ss_pred -----HHHhCCCC----eEEechHHccEEccCCCC---------ceeeehhhHHHHHHHHhcCCEEEeeCeeecCCCCCE
Confidence 57899998 899999887777754321 367788899999999999999999997 67888999
Q ss_pred eec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHh
Q 010815 159 LNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 209 (500)
Q Consensus 159 ~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~ 209 (500)
+++ ++|.+|+.||.+|+|++++|+|||||++ +++++|++++.+|++++...
T Consensus 151 ~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~ 211 (403)
T PRK08210 151 TTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQ 211 (403)
T ss_pred EEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHC
Confidence 888 6999999999999999999999999984 36899999999999998643
|
|
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.8e-20 Score=170.86 Aligned_cols=235 Identities=20% Similarity=0.180 Sum_probs=154.8
Q ss_pred ccccHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHH--HHHHH--HHHHhHHHHHHHHhhC
Q 010815 3 FFIPWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSE--SLAAA--MEAAGGIRMMIEAKLS 78 (500)
Q Consensus 3 ~~~~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~--~l~~~--~~~~~~i~~~i~~~l~ 78 (500)
+.+-+..|++.++.|+..|++++||.+|+-..+..-.++.+-+ ....|-|... ++... .++.|. ..+.+...
T Consensus 30 aLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~--s~s~r~~l~~~~~l~e~rA~AAvGQ--~~Lmalye 105 (285)
T KOG1154|consen 30 ALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLP--SSSMRQTLKPQSELAEKRACAAVGQ--SGLMALYE 105 (285)
T ss_pred hHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhcc--chhHHHhhCCccchhhHHHHHHhCc--chHHHHHH
Confidence 4456789999999999999999999999877765443333332 1122333222 12221 111111 22222211
Q ss_pred CCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCe
Q 010815 79 PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEV 158 (500)
Q Consensus 79 ~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~ 158 (500)
. .|.++|+. .+.+.++-.| |..-++ +.--..+|++||.-|+|||++.++..+..++
T Consensus 106 ~-----lF~Qy~~~--iAQvLvT~~D--i~d~~~---------------r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~ 161 (285)
T KOG1154|consen 106 T-----LFTQYGIT--IAQVLVTRND--ILDEQQ---------------RKNLQNTISELLSMNVIPIVNENDAVSPREI 161 (285)
T ss_pred H-----HHHHhccc--hheeeecCcc--hhhHHH---------------HHHHHHHHHHHHhCCceeeecCCCccCCccc
Confidence 1 46778876 3334443322 322111 1112679999999999999999877665566
Q ss_pred eecC---HHHHHHHHHHHcCCCEEEEEecCcccCC---C---CccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccc
Q 010815 159 LNCN---TYEVATACALAIEADKLICIIDGPILDE---S---GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 229 (500)
Q Consensus 159 ~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv~~---~---g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (500)
.+-| +|.+|+.+|.+++||.|++||||+|++. + .++|+..++.+-
T Consensus 162 ~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~-------------------------- 215 (285)
T KOG1154|consen 162 PFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDP-------------------------- 215 (285)
T ss_pred ccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCC--------------------------
Confidence 6666 9999999999999999999999999852 2 344444433211
Q ss_pred cccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeE
Q 010815 230 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 309 (500)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 309 (500)
+ ..-+|+.++.+++| | |.+||.||..|..+||. +
T Consensus 216 -----~------------------v~~tfG~~SkvGtG-G---------------------M~tKv~AA~~A~~~Gv~-v 249 (285)
T KOG1154|consen 216 -----Q------------------VSTTFGSKSKVGTG-G---------------------METKVKAAVNALNAGVS-V 249 (285)
T ss_pred -----C------------------CccccCccCccCcC-c---------------------chhhHHHHHHHhcCCce-E
Confidence 0 00133445556665 4 99999999999999998 7
Q ss_pred EeeccccCceeeehhhhcCCCcceeeccc
Q 010815 310 HLLDGTIGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 310 ~~~~~~~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
.|.+|..|.+ +..++.+...||.|....
T Consensus 250 iI~~g~~p~~-I~~iv~g~kvgt~f~~~~ 277 (285)
T KOG1154|consen 250 IITNGDAPEN-ITDIVEGKKVGTFFEQLK 277 (285)
T ss_pred EEeCCCChHH-HHHHHhhhhhhhhhhhcc
Confidence 8999999997 477888777899986543
|
|
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=180.48 Aligned_cols=177 Identities=17% Similarity=0.171 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHH-HHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i-~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.++..|.++|+||||++.++..+.+++...- . .+.|+.....+++. ...+ +..+.+ .
T Consensus 18 i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~-~--~~~~~~~~~~i~~~-Ge~~s~~~~~~---------~ 84 (401)
T TIGR00656 18 IKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAI-R--DAITPRERDELVSH-GERLSSALFSG---------A 84 (401)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHh-c--cCCChHHHHHHhhH-HHHHHHHHHHH---------H
Confidence 5789999999999999999999999999888766553100 0 13455444333333 3334 344444 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCH-HHHHHHHhCCCcEEEcC-cccCCCCCeeec--
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILSN-LGYSSSGEVLNC-- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~-~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i-- 161 (500)
|+++|++ +..+++.+..+++..+. + .+++..++. +.|+.+++.|.|||+++ .+.+.+|..+++
T Consensus 85 l~~~g~~----a~~l~~~~~~~~t~~~~--------~-~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~~g~~~~lgr 151 (401)
T TIGR00656 85 LRDLGVK----AIWLDGGEAGIITDDNF--------G-NAKIDIIATEERLLPLLEEGIIVVVAGFQGATEKGYTTTLGR 151 (401)
T ss_pred HHhCCCc----eEEeccccceEEeCCCC--------C-ceEeeecchHHHHHHHHhCCCEEEecCcceeCCCCCEeecCC
Confidence 8899998 89999888877775432 1 256777888 99999999999999999 577778888887
Q ss_pred -CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHh
Q 010815 162 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 209 (500)
Q Consensus 162 -~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~ 209 (500)
++|.+|+.+|.+|+|++++++|||||++ |++++|++++.+|+.++...
T Consensus 152 g~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~ 207 (401)
T TIGR00656 152 GGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATF 207 (401)
T ss_pred CcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHc
Confidence 6999999999999999999999999984 36789999999999999743
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases. |
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=178.32 Aligned_cols=175 Identities=18% Similarity=0.218 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECC-hHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGg-G~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.+...|.++|+|||| |+..+.+++....... .+++..++.+......+|..+... .
T Consensus 19 ~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~Ge~~~~~~~~~--------~ 84 (404)
T PRK06635 19 IKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVSP------LPDPRELDMLLSTGEQVSVALLAM--------A 84 (404)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhcc------CCCHHHHHHHhhhhHHHHHHHHHH--------H
Confidence 678999999999999999888886 6777776665432111 125566665543333566654443 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-cccCCCCCeeec---
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC--- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i--- 161 (500)
|+++|++ +..+++.+..+++... ++ .+++..++.+.|+.+++.|.|||+++ ++.+.+|+++++
T Consensus 85 l~~~g~~----a~~l~~~~~~~~~~~~--------~~-~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~~g~~~~l~rg 151 (404)
T PRK06635 85 LQSLGVK----ARSFTGWQAGIITDSA--------HG-KARITDIDPSRIREALDEGDVVVVAGFQGVDEDGEITTLGRG 151 (404)
T ss_pred HHhCCCC----eEEeChhhCCEEecCC--------CC-ceEeeecCHHHHHHHHhCCCEEEecCccEeCCCCCEEecCCC
Confidence 7899998 8888888877666532 21 36788899999999999999999999 577888999999
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHH
Q 010815 162 NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~ 208 (500)
++|.+|+.+|.+|+||+++++|||||++ +++++|++++.+|++++..
T Consensus 152 ~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~ 205 (404)
T PRK06635 152 GSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELAS 205 (404)
T ss_pred ChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHH
Confidence 9999999999999999999999999984 3688999999999988853
|
|
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=172.51 Aligned_cols=177 Identities=16% Similarity=0.250 Sum_probs=141.4
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
-+.+++++|+.+...|.++|+||||++..+..+..+..... +.+++.+++.+......++..+.+. .
T Consensus 18 ~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~-----~~~~~~~~d~l~s~GE~~s~~lla~--------~ 84 (392)
T PRK08841 18 RIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD-----SVPTARELDVLLSAGEQVSMALLAM--------T 84 (392)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHH--------H
Confidence 35789999999999999999999999855555444433321 4567778887766655666666554 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeec---
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC--- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i--- 161 (500)
|++.|++ +..+++.+..+++.... ..+.+..++.+.|+.+++.|.|||+++. +.+.+|++.++
T Consensus 85 L~~~Gi~----a~~l~~~~~~i~t~~~~---------~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~g~~~~g~~ttlgrg 151 (392)
T PRK08841 85 LNKLGYA----ARSLTGAQANIVTDNQH---------NDATIKHIDTSTITELLEQDQIVIVAGFQGRNENGDITTLGRG 151 (392)
T ss_pred HHhCCCC----eEEEehhHcCEEecCCC---------CCceechhhHHHHHHHHhCCCEEEEeCCcccCCCCCEEEeCCC
Confidence 8899998 88888888766664321 1367777889999999999999999985 67888999888
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHHHH
Q 010815 162 NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~~~ 208 (500)
++|..|+.+|.+|+||.++++|||||+ | |++++|++++.+|+.++..
T Consensus 152 gsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~ 205 (392)
T PRK08841 152 GSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMAR 205 (392)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHh
Confidence 999999999999999999999999998 3 3589999999999888863
|
|
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-18 Score=165.39 Aligned_cols=199 Identities=19% Similarity=0.161 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHH-HHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i-~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.+...|.++|||||||+++ +....+++.. +.+ .+.+..+...+|..+... +
T Consensus 25 i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~~-------~~~----~d~~g~~~~~~n~~ll~~--------~ 85 (231)
T cd04254 25 LNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGMD-------RAT----ADYMGMLATVINALALQD--------A 85 (231)
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcCCC-------chh----hhHHHHHHHHHHHHHHHH--------H
Confidence 5688999998888899999999999874 2223333322 222 233323455667644332 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ +..+++.+-+. + ...++.+.++.+|+.|+|||++.- .|. ..+++|.
T Consensus 86 L~~~Gv~----a~~l~~~~~~~----------------~--~~~~~~~~l~~~l~~g~ipV~~g~----~G~-~~~~~D~ 138 (231)
T cd04254 86 LESLGVK----TRVMSAIPMQG----------------V--AEPYIRRRAIRHLEKGRVVIFAGG----TGN-PFFTTDT 138 (231)
T ss_pred HHHcCCC----eEEEcHHHhhh----------------h--hcccCHHHHHHHHHCCCEEEEECC----cCC-CCCCcHH
Confidence 7889987 66666554211 1 124678999999999999999832 232 3569999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.||.+|+||+++|+|||||++ |++++|++++.+|+.+. +.
T Consensus 139 ~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~---~~--------------------------- 188 (231)
T cd04254 139 AAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSK---GL--------------------------- 188 (231)
T ss_pred HHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhc---ch---------------------------
Confidence 999999999999999999999983 25789999998776332 11
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
..-++.++..|.++|++ ++|+|+..|+
T Consensus 189 ----------------------------------------------------~~~d~~a~~~a~~~gi~-~~I~~g~~~~ 215 (231)
T cd04254 189 ----------------------------------------------------KVMDATAFTLCRDNNLP-IVVFNINEPG 215 (231)
T ss_pred ----------------------------------------------------hhhHHHHHHHHHHCCCe-EEEEeCCCcc
Confidence 11245667777778987 8999999999
Q ss_pred eeeehhhhcCCCcceee
Q 010815 319 VLLLELFKRDGMGTMVA 335 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~ 335 (500)
+| ..++.++..||.|.
T Consensus 216 ~l-~~~l~g~~~GT~i~ 231 (231)
T cd04254 216 NL-LKAVKGEGVGTLIS 231 (231)
T ss_pred HH-HHHHCCCCCCEEeC
Confidence 75 45556667899984
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=186.13 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=149.3
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCc-eeeCCccCCCHHHHH--HH-HHHHhHHHHHHHHhhCCCC
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA-KYLGRYRITDSESLA--AA-MEAAGGIRMMIEAKLSPGP 81 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~-~~~~g~r~t~~~~l~--~~-~~~~~~i~~~i~~~l~~~~ 81 (500)
-+.++++.|+.|+..|+++|||.+|-...+..+..+.-.. +...-+. .+...++ .+ ..-+..+......
T Consensus 38 ~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~~~~-~~~~~~~~qa~aa~Gq~~l~~~~~~------ 110 (718)
T PLN02418 38 RLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFADLQ-KPQMELDGKACAAVGQSELMALYDT------ 110 (718)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhcccccCC-CCcchHHHHHHHHhhHHHHHHHHHH------
Confidence 4678999999999999999999888555544333221100 0000000 0111122 11 2222223333333
Q ss_pred CchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCC--C---
Q 010815 82 PICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS--G--- 156 (500)
Q Consensus 82 ~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~--g--- 156 (500)
.|+++|++ +..+-..+..|-..+ ......+.|+.||+.|+|||+++++.... +
T Consensus 111 ---~f~~~g~~----~~qillT~~~~~~~~---------------~~~~~~~~l~~ll~~g~iPVv~~nd~v~~~~~~~~ 168 (718)
T PLN02418 111 ---LFSQLDVT----ASQLLVTDSDFRDPD---------------FRKQLSETVESLLDLRVIPIFNENDAVSTRRAPYE 168 (718)
T ss_pred ---HHHHcCCe----EEEEEecHhHhcchh---------------HhHhHHHHHHHHHHCCCEEEEcCCCCccccccccc
Confidence 57888875 222222222222211 12345789999999999999998644322 1
Q ss_pred --CeeecCHHHHHHHHHHHcCCCEEEEEecCcccC------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhccc
Q 010815 157 --EVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 228 (500)
Q Consensus 157 --~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (500)
...++|+|.+|+.||.+++||+|+|+|||||++ +++++|++++..+.+..+..+.
T Consensus 169 ~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~----------------- 231 (718)
T PLN02418 169 DSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGE----------------- 231 (718)
T ss_pred cccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhccc-----------------
Confidence 236889999999999999999999999999984 3478889887655443332111
Q ss_pred ccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCe
Q 010815 229 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 308 (500)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 308 (500)
.+. +.+|| |.+||++|..|.++|++
T Consensus 232 --------------------------------~s~-------------~~tGG---------M~~Kl~Aa~~a~~~Gi~- 256 (718)
T PLN02418 232 --------------------------------KSR-------------VGRGG---------MTAKVKAAVNAASAGIP- 256 (718)
T ss_pred --------------------------------ccc-------------cCCCC---------cHHHHHHHHHHHHCCCc-
Confidence 001 22334 99999999999999997
Q ss_pred EEeeccccCceeeehhhhcCCCcceeeccc
Q 010815 309 VHLLDGTIGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 309 ~~~~~~~~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
++|+||+.|+. +.+++.++..||.|.++.
T Consensus 257 v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~ 285 (718)
T PLN02418 257 VVITSGYALDN-IRKVLRGERVGTLFHQDA 285 (718)
T ss_pred EEEeCCCCcch-HHHHhcCCCCceEecccc
Confidence 89999999986 467777788899998764
|
|
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-17 Score=159.32 Aligned_cols=199 Identities=19% Similarity=0.183 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHH-HHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMI-EAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i-~~~l~~~~~~~~ 85 (500)
+.+++++|+.++..|+++|||||+|++..- ... . .. +....+.+......+|..+ .. .
T Consensus 25 i~~la~~i~~~~~~g~~viiV~GgGs~~~g--~~~--~-------~~-~~~~~d~ig~~~~~ln~~~~~~---------~ 83 (231)
T PRK14558 25 VNYLVNEIKSVVEYGFKIGIVIGAGNLFRG--VEL--K-------EL-SPTRADQIGMLGTVINALYLKD---------I 83 (231)
T ss_pred HHHHHHHHHHHHHCCCeEEEEECccHHHHH--Hhc--c-------CC-ChHHHHHHHHHHHHHHHHHHHH---------H
Confidence 568999999999999999999999997441 111 1 01 2223333323334466543 44 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++.+... ... +.+...+.+.|..+|+.|+|||+++... ..++++|.
T Consensus 84 l~~~gi~----a~~~~~~----~~~--------------~~~~~~~~~~i~~ll~~g~vpV~~G~~~-----~~~~~~D~ 136 (231)
T PRK14558 84 FEKSGLK----AVIVSQI----VNL--------------PSVEPINYDDIELYFRAGYIVIFAGGTS-----NPFFTTDT 136 (231)
T ss_pred HHHcCCC----eEEeccc----ccc--------------chhhhhhHHHHHHHHHCCCEEEEECCCC-----CCCCCcHH
Confidence 7889987 4444421 110 0122345899999999999999997631 23568999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.+|..|+||.++++|||||++ |++++|++|+.+|+.++ +..
T Consensus 137 ~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g~~-------------------------- 187 (231)
T PRK14558 137 AAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---GLK-------------------------- 187 (231)
T ss_pred HHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---Ccc--------------------------
Confidence 999999999999999999999983 35899999987665443 110
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
. | +..++..|.++|++ ++|+|+..|+
T Consensus 188 ------------------------------~---------------------~--d~~a~~~a~~~gi~-v~I~ng~~~~ 213 (231)
T PRK14558 188 ------------------------------V---------------------M--DTEAFSICKKYGIT-ILVINFFEPG 213 (231)
T ss_pred ------------------------------c---------------------c--cHHHHHHHHHCCCC-EEEEeCCCCC
Confidence 0 2 24556667788998 8999999998
Q ss_pred eeeehhhhcCCCcceeecc
Q 010815 319 VLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~~d 337 (500)
++ ..++.++..||.|.++
T Consensus 214 ~l-~~~l~g~~~GT~i~~~ 231 (231)
T PRK14558 214 NL-LKALKGENVGTLVVPD 231 (231)
T ss_pred HH-HHHHCCCCCcEEeCCC
Confidence 75 4556667789999763
|
|
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-17 Score=157.11 Aligned_cols=194 Identities=16% Similarity=0.110 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcC-CCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERG-HEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g-~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++.|+.+.. |.++|||||||++.+.+.+... +. . +....+..-....++|..+++.+
T Consensus 20 i~~~~~~i~~~~~-~~~iiiV~GgG~~a~~~~~~~~~~~--------~-~~~~~d~~g~~~~~ln~~~~~~~-------- 81 (221)
T cd04253 20 IKEYANVLRKISD-GHKVAVVVGGGRLAREYISVARKLG--------A-SEAFLDEIGIMATRLNARLLIAA-------- 81 (221)
T ss_pred HHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHHHcC--------C-CHHHHHHhcCHHHHHHHHHHHHH--------
Confidence 5577888887765 7899999999999887654321 11 0 11233444333458888887742
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
..+|++ ++.+ +.+.+..+|+.|.|||+++.. + ++++|.
T Consensus 82 -l~~~~~----~~~~------------------------------~~~~~~~~l~~g~vpv~~G~~--~-----~~s~D~ 119 (221)
T cd04253 82 -LGDAYP----PVPT------------------------------SYEEALEAMFTGKIVVMGGTE--P-----GQSTDA 119 (221)
T ss_pred -HhcCCC----cCCC------------------------------CHHHHHHHHHcCCeEEEECCC--C-----CCccHH
Confidence 334543 2221 356788999999999998753 1 368999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.+|.+|+||+|+++|||+|++ +++++|++|+.+|+.++.....
T Consensus 120 ~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~--------------------------- 172 (221)
T cd04253 120 VAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKSS--------------------------- 172 (221)
T ss_pred HHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCCC---------------------------
Confidence 999999999999999999999983 2489999999888877742210
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
+..|++ |..++.++..+.+.|++ ++|+||+.|+
T Consensus 173 -------------------------~~~g~~---------------------~~~d~~a~~~~~~~gi~-~~I~~g~~p~ 205 (221)
T cd04253 173 -------------------------WKAGSN---------------------EPFDPLAAKIIERSGIK-TIVVDGRDPE 205 (221)
T ss_pred -------------------------cCCCCC---------------------cchHHHHHHHHHHCCCe-EEEECCCCcc
Confidence 111211 56788888888999997 8999999998
Q ss_pred eeeehhhhcCCCcceee
Q 010815 319 VLLLELFKRDGMGTMVA 335 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~ 335 (500)
. +.+++.++..||.|.
T Consensus 206 ~-l~~~l~g~~~GT~I~ 221 (221)
T cd04253 206 N-LERALKGEFVGTIIE 221 (221)
T ss_pred H-HHHHHCCCCCCeEeC
Confidence 6 466677778899873
|
The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi |
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.6e-17 Score=156.53 Aligned_cols=196 Identities=16% Similarity=0.122 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.++++.|+.++.. +++|||||||++...+... ... .. .+...++..-....++|..+.+.| |
T Consensus 19 i~~i~~~i~~~~~~-~~viiV~ggG~~a~~~~~~-~~~--~~-----~~~~~~~~~g~~~~~ln~~~l~~l--------l 81 (221)
T TIGR02076 19 IKEFANILRKLSDE-HKVGVVVGGGKTARRYIGV-ARE--LG-----ASETFLDEIGIDATRLNAMLLIAA--------L 81 (221)
T ss_pred HHHHHHHHHHHHhC-CeEEEEECCcHHHHHHHHH-HHH--cC-----CCHHHHHHhhhHHHHHHHHHHHHH--------H
Confidence 56788889988776 8999999999987554321 100 00 122344555445578888877742 4
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
...+++ ++.. +......+++.|.|||+++.. + .+++|++
T Consensus 82 ~~~~~~----~~~~------------------------------~~~~~~~~l~~g~ipv~~G~~--~-----~~s~D~~ 120 (221)
T TIGR02076 82 GDDAYP----KVPE------------------------------NFEEALEAMSLGKIVVMGGTH--P-----GHTTDAV 120 (221)
T ss_pred HhcCCC----CcCC------------------------------CHHHHHHHHHcCCEEEEcCCC--C-----CCCcHHH
Confidence 444554 2111 233456788889999998753 1 4799999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 167 ATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++..++.
T Consensus 121 A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~---------------------------- 172 (221)
T TIGR02076 121 AALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSSS---------------------------- 172 (221)
T ss_pred HHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCCC----------------------------
Confidence 99999999999999999999984 3579999999888877753210
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
+++|++ |..|+.++..+.+.|++ ++|++++.|+.
T Consensus 173 ------------------------~~~g~~---------------------~~~~~~a~~~~~~~~i~-v~I~~g~~~~~ 206 (221)
T TIGR02076 173 ------------------------VKAGSN---------------------EVVDPLAAKIIERSKIR-TIVVNGRDPEN 206 (221)
T ss_pred ------------------------ccCCCC---------------------ceeHHHHHHHHHHCCCc-EEEECCCCccH
Confidence 112212 67788888888888886 89999999987
Q ss_pred eeehhhhcCCCcceee
Q 010815 320 LLLELFKRDGMGTMVA 335 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~ 335 (500)
++ .++.++..||.|.
T Consensus 207 l~-~~l~g~~~GT~i~ 221 (221)
T TIGR02076 207 LE-KVLKGEHVGTIIE 221 (221)
T ss_pred HH-HHHCCCCCCeEeC
Confidence 65 5666777899873
|
This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP. |
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=6e-17 Score=158.01 Aligned_cols=198 Identities=19% Similarity=0.133 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHH-HHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHH-HHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMI-EAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i-~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i-~~~l~~~~~~~ 84 (500)
+.++++.|+.+...|+++|||||+|++. +...++++..... .+........+|..+ .+
T Consensus 26 i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~a~~~~~~~~~-----------~d~~g~~~~~l~~~l~~~--------- 85 (233)
T TIGR02075 26 LNRIANEIKELVKMGIEVGIVIGGGNIFRGVSAKELGIDRVT-----------ADYMGMLATVINGLALRD--------- 85 (233)
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCCHHHHHHHHHhcCCCCcc-----------HHHHHHHHHHHHHHHHHH---------
Confidence 5678999998888889999999999863 3235666644211 233322233455554 44
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|..+|++ +..+++.+-. .. ......+.++.+|++|+|||++.. .| ..++++|
T Consensus 86 ~L~~~Gi~----a~~l~~~~~~-~~-----------------~~~~~~~~i~~ll~~g~VpV~~g~----~g-~~~~s~D 138 (233)
T TIGR02075 86 ALEKLGVK----TRVLSAISMP-QI-----------------CESYIRRKAIKHLEKGKVVIFSGG----TG-NPFFTTD 138 (233)
T ss_pred HHHhCCCC----cEEeccccCC-CC-----------------ccccCHHHHHHHHHCCCEEEEECC----CC-CCCCCch
Confidence 57889988 6666654421 00 012347899999999999998743 12 2468999
Q ss_pred HHHHHHHHHcCCCEEEEEec-CcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 165 EVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTd-v~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
.+|+.||..|+||.|+|+|| |||++ |++++|++++.+|+.+. +.
T Consensus 139 ~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~------------------------- 190 (233)
T TIGR02075 139 TAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL------------------------- 190 (233)
T ss_pred HHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH-------------------------
Confidence 99999999999999999999 99983 35789999997775432 11
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
-.-++.++..|.++|++ ++|+|+..
T Consensus 191 ------------------------------------------------------~~~d~~~~~~a~~~~i~-v~i~~g~~ 215 (233)
T TIGR02075 191 ------------------------------------------------------KVMDLTAFALARDNNLP-IVVFNIDE 215 (233)
T ss_pred ------------------------------------------------------HHHHHHHHHHHHHCCCe-EEEEeCCC
Confidence 01235566777788987 89999999
Q ss_pred CceeeehhhhcCCCcceee
Q 010815 317 GGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~ 335 (500)
|++| ..++.++..||.|.
T Consensus 216 ~~~l-~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 216 PGAL-KKVILGKGIGTLVS 233 (233)
T ss_pred cchH-HHHHCCCCCCEEeC
Confidence 9875 45556677899873
|
This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. |
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.6e-17 Score=176.98 Aligned_cols=173 Identities=18% Similarity=0.222 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHH---HHHHHHHhHHHHHHHHhhCCCCCc
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL---AAAMEAAGGIRMMIEAKLSPGPPI 83 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l---~~~~~~~~~i~~~i~~~l~~~~~~ 83 (500)
+.+++++|+.+...|.++|||||++..+...+.+++. ++|+..+. +.+......++..+++.
T Consensus 19 i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~--------~~t~~~~~~~~~~~ls~Ge~~s~~l~~~------- 83 (587)
T PRK07431 19 IQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAK--------EISSNPPRREMDMLLSTGEQVSIALLSM------- 83 (587)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHH--------HhccCCCHHHHHHHHHHhHHHHHHHHHH-------
Confidence 6789999999999999999999975444444434432 12333333 33333334667777654
Q ss_pred hhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-cc--CCCCCeee
Q 010815 84 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GY--SSSGEVLN 160 (500)
Q Consensus 84 ~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~--~~~g~~~~ 160 (500)
.|+++|++ ++++++.+.++++... ++ .+++..++.+.|+.+++.|+|||+++. +. +..|++.+
T Consensus 84 -~l~~~gi~----a~~l~~~~~~~~~~~~--------~~-~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~~~g~~~~ 149 (587)
T PRK07431 84 -ALHELGQP----AISLTGAQVGIVTESE--------HG-RARILEIKTDRIQRHLDAGKVVVVAGFQGISLSSNLEITT 149 (587)
T ss_pred -HHHHCCCC----eEEechhHcCeEecCC--------CC-ceeeeeccHHHHHHHHhCCCeEEecCCcCCCCCCCCCEee
Confidence 57899998 8999998877776542 22 378888999999999999999999975 43 23477776
Q ss_pred c---CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHHHH
Q 010815 161 C---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 161 i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~~~ 208 (500)
+ ++|.+|+.||.+|+||+++|+|||||++ | ++++|++++.+|+.++..
T Consensus 150 lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~ 207 (587)
T PRK07431 150 LGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELAS 207 (587)
T ss_pred cCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHh
Confidence 5 8999999999999999999999999984 3 589999999999999863
|
|
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.3e-16 Score=164.57 Aligned_cols=181 Identities=16% Similarity=0.171 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCc---------------------------cCCCHH--
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY---------------------------RITDSE-- 57 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~---------------------------r~t~~~-- 57 (500)
+.++++.|......|+++|+||++.+.++..|.+........++. +.++..
T Consensus 18 ~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 97 (441)
T TIGR00657 18 IRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEILERLIPQAIAEELKRLLDAELV 97 (441)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 567888888777889999999999999988887776544332210 000000
Q ss_pred ------HHHHHHHHHh-HHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeee
Q 010815 58 ------SLAAAMEAAG-GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130 (500)
Q Consensus 58 ------~l~~~~~~~~-~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~v 130 (500)
..+. ..+.| .++..++.. .|+++|++ ++++++.+..+++... ++....+..+
T Consensus 98 ~~~~~~~~d~-ils~GE~~s~~l~~~--------~l~~~Gi~----a~~l~~~~~~l~t~~~--------~~~~~~~~~~ 156 (441)
T TIGR00657 98 LEEKPREMDR-ILSFGERLSAALLSA--------ALEELGVK----AVSLLGGEAGILTDSN--------FGRARVIIEI 156 (441)
T ss_pred hhcCcchHhh-eecHHHHHHHHHHHH--------HHHhCCCC----CEEEEcCcceEEecCC--------CCceeecHhh
Confidence 0011 12224 555554443 68899998 8999999988777543 2222246678
Q ss_pred CHHHHHHHHhCCCcEEEcC-cccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccC
Q 010815 131 DVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLT 199 (500)
Q Consensus 131 d~~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~ 199 (500)
+.+.|..+++.|.|||+++ ++.+..|+..++ ++|.+|+.||.+|+|++|+++|||||++ | ++++|++++
T Consensus 157 ~~~~l~~~l~~~~vpVv~G~~g~~~~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~a~~i~~is 236 (441)
T TIGR00657 157 LTERLEPLLEEGIIPVVAGFQGATEKGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPDARRIDEIS 236 (441)
T ss_pred hHHHHHHHHhcCCEEEEeCcEeeCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCCeECCccC
Confidence 9999999999999999999 467778888887 7999999999999999999999999984 3 588999999
Q ss_pred HHHHHHHHH
Q 010815 200 LQEADSLIR 208 (500)
Q Consensus 200 ~~e~~~~~~ 208 (500)
.+|+.++..
T Consensus 237 ~~ea~el~~ 245 (441)
T TIGR00657 237 YEEMLELAS 245 (441)
T ss_pred HHHHHHHHh
Confidence 999998864
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis. |
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=144.08 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=64.4
Q ss_pred CHHHHHHHHhCCCcEEEcCccc----CCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHH
Q 010815 131 DVTRMRERLDGGCLVILSNLGY----SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 203 (500)
Q Consensus 131 d~~~I~~lL~~g~IPVi~~~~~----~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~ 203 (500)
+.+.+.+++..|.|||+.|... +..++.+|+|+|++|+.+|.+|+|++|+++|||||++ .++++|++++.+++
T Consensus 80 ~~~~~~~~~~~g~ipV~~P~~~~~~~~~~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~da~~i~~i~~~e~ 157 (203)
T cd04240 80 TLAELTDVLERGKIAILLPYRLLLDTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKDGKLVNEIAAAEL 157 (203)
T ss_pred CHHHHHHHHHCCCcEEEeCchhhcccCCCCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCcCccccCHHHh
Confidence 4678999999999999999866 4457788999999999999999999999999999985 46899999987664
|
Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily. |
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-14 Score=140.92 Aligned_cols=202 Identities=17% Similarity=0.157 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChH-HHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHV-QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~-~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+..+++.|+.+...|++++||||||. +....++++++ ++..++.+-+....+|..+... .
T Consensus 29 i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~a~~~~~-----------~~~~~D~ig~~g~~lna~ll~~--------~ 89 (247)
T PRK14557 29 LEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGI-----------DRVEADNIGTLGTIINSLMLRG--------V 89 (247)
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCcHHHHHHHHHhcCC-----------ChHHHHHHHHHHHHHHHHHHHH--------H
Confidence 67889999999999999999999987 33345656553 2335566667778888777664 2
Q ss_pred hhhc-CCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeecCH
Q 010815 86 IRRH-GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNCNT 163 (500)
Q Consensus 86 l~~~-Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i~~ 163 (500)
|+.. +.. ..+++... +......++...+...|++|.|||+++. +. -.+++
T Consensus 90 l~~~~~~~------------~~i~t~~~----------~~~~~~~~~~~~~~~~l~~g~VvV~~G~~g~------~~~st 141 (247)
T PRK14557 90 LTSKTNKE------------VRVMTSIP----------FNAVAEPYIRLRAVHHLDNGYIVIFGGGNGQ------PFVTT 141 (247)
T ss_pred HHhhhCCc------------eeEEeccc----------cccccchhhHHHHHHHHhCCCEEEEECCcCC------CccCh
Confidence 3332 221 11222111 1111223455667777999999999764 21 35779
Q ss_pred HHHHHHHHHHcCCCEEEEE-ecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 164 YEVATACALAIEADKLICI-IDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~l-Tdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
|.+|+.+|..++||.|+++ |||||++ |++++|++|+..|+. ..+. ++
T Consensus 142 D~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~---~~~~---~~------------------- 196 (247)
T PRK14557 142 DYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV---RQNI---QV------------------- 196 (247)
T ss_pred HHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc---ccCH---HH-------------------
Confidence 9999999999999999999 5999983 358999999876552 1110 00
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
|. ..|+..|.++|++ ++|+|++
T Consensus 197 -------------------------------------------------------~~--~~A~~~a~~~gi~-v~I~ng~ 218 (247)
T PRK14557 197 -------------------------------------------------------MD--QAALLLARDYNLP-AHVFNFD 218 (247)
T ss_pred -------------------------------------------------------HH--HHHHHHHHHCCCc-EEEEeCC
Confidence 21 2466778888997 8999999
Q ss_pred cCceeeehhhhcCCCcceeecccc
Q 010815 316 IGGVLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 316 ~~~~ll~~l~~~~~~GT~i~~d~~ 339 (500)
.|+.| ..++.++..||.|.+...
T Consensus 219 ~~~~l-~~~l~g~~~GT~i~~~~~ 241 (247)
T PRK14557 219 EPGVM-RRICLGEHVGTLINDDAS 241 (247)
T ss_pred CChHH-HHHHcCCCCcEEEecCcc
Confidence 99865 566677888999987665
|
|
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.3e-15 Score=132.72 Aligned_cols=131 Identities=32% Similarity=0.603 Sum_probs=112.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 419 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~ 419 (500)
+.||+++.+|++.+.+++............+.+.+..++..++++..+++++|++.+.... ....++..++|+|+|||+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~~~-~~~~~i~~v~V~p~~rg~ 80 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHILW-EDLAEIRSLAVSEDYRGQ 80 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEecc-CCceEEEEEEECHHHcCC
Confidence 4699999999999999998776665555667777778888888888999999999997543 456789999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhh
Q 010815 420 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKR 472 (500)
Q Consensus 420 GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~ 472 (500)
|+|+.|+.++++++++.++..+.+.+ .+.+||+|+||+..+...+|+..|..
T Consensus 81 Glg~~Ll~~l~~~a~~~g~~~i~~~~-~~~~~Y~k~GF~~~~~~~~~~~~~~~ 132 (152)
T PRK07757 81 GIGRMLVEACLEEARELGVKRVFALT-YQPEFFEKLGFREVDKEALPQKVWAD 132 (152)
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEe-CcHHHHHHCCCEEcccccCChhHHhc
Confidence 99999999999999999999887766 46899999999999998888766543
|
|
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-14 Score=130.06 Aligned_cols=125 Identities=21% Similarity=0.293 Sum_probs=96.8
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecC----CCeEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----EKCGEVAAI 410 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~----~~~~~I~~l 410 (500)
..+||+++.+|++.+.+++.+.....+......+.+...+ ..+++++.++++||++.+..... ...++|..+
T Consensus 3 ~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l 82 (144)
T PRK10146 3 ACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQEL 82 (144)
T ss_pred ccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheehee
Confidence 3469999999999999998765544332222222333332 34677888999999999864321 224578899
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|+|+|||+|+|+.|+.+++++|++.|++.+.+.+ ..|++||+++||+..+..
T Consensus 83 ~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~~ 139 (144)
T PRK10146 83 VVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFR 139 (144)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhhh
Confidence 99999999999999999999999999999999987 479999999999987543
|
|
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.5e-14 Score=135.11 Aligned_cols=202 Identities=18% Similarity=0.151 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+..++++|+.+.+.|+++.||-|||...--...+.+.. .++...+..-++...+|..+.+. +|
T Consensus 40 ~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~~---------~~r~~~D~~GmlaT~iNal~l~~--------~l 102 (249)
T PRK14556 40 AQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGNK---------IRRATADSMGMIATMINALALRD--------ML 102 (249)
T ss_pred HHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccCC---------CchhhhhHHHHHHHHHHHHHHHH--------HH
Confidence 78899999999999999999999998754322221111 24455666667778888766553 67
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
.+.|++ +.-++..... +..+..+.+.+.+.|+.|-|||+..-. | .-++++|++
T Consensus 103 ~~~~~~----~~v~sa~~~~------------------~~~e~~~~~~~~~~l~~g~vvi~~gg~----G-~p~~StD~l 155 (249)
T PRK14556 103 ISEGVD----AEVFSAKGVD------------------GLLKVASAHEFNQELAKGRVLIFAGGT----G-NPFVTTDTT 155 (249)
T ss_pred HHcCCC----eEEeeccccC------------------cCCCCCCHHHHHHHHhCCCEEEEECCC----C-CCcCCcHHH
Confidence 788877 3333322211 011233788888999999999976531 1 235789999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 167 ATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
|+.+|..++||.|+++|||||++ |+.+++++++..|.... +. ++
T Consensus 156 AallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~l---~v----------------------- 206 (249)
T PRK14556 156 ASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---EL---NV----------------------- 206 (249)
T ss_pred HHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---ch---Hh-----------------------
Confidence 99999999999999999999984 34678888876654221 00 00
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
| +..|+..+.++|++ ++|+|++.|++
T Consensus 207 ---------------------------------------------------m--d~~A~~~a~~~gIp-i~I~ng~~~~~ 232 (249)
T PRK14556 207 ---------------------------------------------------M--DLGAFTQCRDFGIP-IYVFDLTQPNA 232 (249)
T ss_pred ---------------------------------------------------H--HHHHHHHHHHCCCc-EEEECCCCchH
Confidence 2 24466677789998 89999999987
Q ss_pred eeehhhhcCCCcceeec
Q 010815 320 LLLELFKRDGMGTMVAS 336 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~~ 336 (500)
| ..++.++..||.|.-
T Consensus 233 L-~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 233 L-VDAVLDSKYGTWVTL 248 (249)
T ss_pred H-HHHHcCCCCceEEEe
Confidence 5 556667778999853
|
|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.4e-14 Score=130.01 Aligned_cols=127 Identities=28% Similarity=0.548 Sum_probs=102.0
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~-~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
+.+++|+++++|.+.+.++++...............+......++++. .+++++|++.+.... ...++|..++|+|+|
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~~-~~~~~i~~l~V~p~~ 82 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW-EDLAEIRTVAVDPAA 82 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeecC-CCceEEEEEEECHHH
Confidence 346899999999999999988766543333333334444556677887 889999999887543 356789999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccc
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp 466 (500)
||+|+|+.|+++++++++++|++++.+.+ .+.+||+|+||+..+....+
T Consensus 83 rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~-~~~~fY~k~GF~~~~~~~~~ 131 (169)
T PRK07922 83 RGRGVGHAIVERLLDVARELGLSRVFVLT-FEVEFFARHGFVEIDGTPVT 131 (169)
T ss_pred hCCCHHHHHHHHHHHHHHHcCCCEEEEEe-ccHHHHHHCCCEECccccCC
Confidence 99999999999999999999999998877 46899999999998765433
|
|
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-13 Score=123.03 Aligned_cols=124 Identities=24% Similarity=0.356 Sum_probs=92.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec-----CCCeEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEKCGEVA 408 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l------~~~~v~~~dg~IVG~~~l~~~~-----~~~~~~I~ 408 (500)
+.||+++++|++.+.+++................+.... ..+++...++++||++.+...+ ....++|.
T Consensus 7 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~ 86 (147)
T PTZ00330 7 LELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIE 86 (147)
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEEE
Confidence 579999999999999998765332211111112222111 1345556789999999886322 11346888
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++++++++++.++..+.+.+ ..+++||+|+||+..+..
T Consensus 87 ~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~~ 142 (147)
T PTZ00330 87 DVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACERQ 142 (147)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEEeceE
Confidence 9999999999999999999999999999998888877 578999999999998754
|
|
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.1e-13 Score=148.41 Aligned_cols=133 Identities=29% Similarity=0.575 Sum_probs=111.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 419 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~ 419 (500)
++||+++.+|++.+.+++..+.......+++.+.+......+++++.++++|||+.+... +....+|..++|+|+||||
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~~g~IVG~~~l~~~-~~~~~~I~~i~V~P~~rGk 542 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYIY-DSGLAEIRSLGVEAGWQVQ 542 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEECCEEEEEEEEEEc-CCCeEEEEEEEECHHHcCC
Confidence 469999999999999998776554444556666777777788999999999999998753 3456789999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhc
Q 010815 420 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 474 (500)
Q Consensus 420 GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~ 474 (500)
|||+.|++++++++++.|++.+.+.+ .+.+||+|+||+..+...+|......-.
T Consensus 543 GIGk~Ll~~l~~~ak~~g~~~i~l~~-~a~~FYek~GF~~~~~~~~~~~~~~~~~ 596 (614)
T PRK12308 543 GQGSALVQYLVEKARQMAIKKVFVLT-RVPEFFMKQGFSPTSKSLLPEKVLKDCD 596 (614)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEee-CcHHHHHHCCCEECCcccCChHHHHhhc
Confidence 99999999999999999999998877 5689999999999999988876554433
|
|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.1e-13 Score=134.15 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=89.7
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-cccCCCCCeeec--
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC-- 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i-- 161 (500)
.|+++|++ +..+++.+.++++....+ +... .++....++. .+..+++.+.|||+++ ++.+..|+.+++
T Consensus 136 ~L~~~Gi~----a~~l~~~~~~i~t~~~~~--~a~~--~~~~~~~i~~-~l~~ll~~~~vpVv~Gfig~~~~g~~ttlgR 206 (298)
T cd04244 136 ALRSLGIK----ARALDGGEAGIITDDNFG--NARP--LPATYERVRK-RLLPMLEDGKIPVVTGFIGATEDGAITTLGR 206 (298)
T ss_pred HHHhCCCC----eEEEcHHHcceeecCccc--cccc--chhHHHHHHH-HHHHHhhcCCEEEEeCccccCCCCCEEEecC
Confidence 68899998 899998887777654321 0000 0222333433 3457889999999999 577888999988
Q ss_pred -CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHHHH
Q 010815 162 -NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 162 -~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~~~ 208 (500)
++|..|+.+|.+|+|+.++++|||||++ | ++++|++++.+|+.++..
T Consensus 207 ggsD~~A~~~A~~l~a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~ 261 (298)
T cd04244 207 GGSDYSATIIGAALDADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAY 261 (298)
T ss_pred CChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHh
Confidence 9999999999999999999999999984 3 589999999999999864
|
The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. |
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.5e-13 Score=118.07 Aligned_cols=119 Identities=21% Similarity=0.355 Sum_probs=89.3
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh--cCcEEEEEECCeEEEEEEEeee----cC--CCeEEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPF----FK--EKCGEVAAIGV 412 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~--l~~~~v~~~dg~IVG~~~l~~~----~~--~~~~~I~~l~V 412 (500)
+||+++++|++++.+|+...+................ ...++++.+++++||++.+.+. .+ -...++..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 4899999999999999887766544332111112221 2578888999999999998764 11 13578999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEe
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 460 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~ 460 (500)
+|+|||+|+|++|++++++.++++|+..+++.. ...+||+++||+.+
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERGVPFIFLFP-SSPPFYRRFGFEYA 127 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE--SSHHHHHHTTEEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec-CChhhhhcCCCEEC
Confidence 999999999999999999999999999888876 56899999999863
|
... |
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=115.96 Aligned_cols=121 Identities=17% Similarity=0.218 Sum_probs=92.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCC--HHHHHhh----cCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKA----LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 412 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s--~~~~~~~----l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V 412 (500)
.+.||+++.+|++.+.+++... .....+. ...+... ...++++..++++||++.+... ....++..++|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~i~v 76 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERC---DLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYD--GHRGWAYYLAV 76 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhc---CCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeecc--CCCceEEEEEE
Confidence 3579999999999999998765 1211221 1112221 2346777888999999987632 23467788999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
+|+|||+|+|+.|++.+++++++.+++.+.+.+ ..+.+||+|+||+..+...
T Consensus 77 ~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~~ 132 (140)
T PRK03624 77 HPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDRIS 132 (140)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccEEe
Confidence 999999999999999999999999999988877 4789999999999876543
|
|
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-12 Score=138.86 Aligned_cols=129 Identities=16% Similarity=0.164 Sum_probs=96.4
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCc--cCCcccceeeeEeeeCHHHHHH
Q 010815 60 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV--VDGVDYGATGEVKKVDVTRMRE 137 (500)
Q Consensus 60 ~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~--~~~~d~g~~G~v~~vd~~~I~~ 137 (500)
+.+...-..++..+... .|+++|++ +..+++.+.++++....+. +...++++. .+.++.
T Consensus 123 d~i~s~GE~~Sa~l~~~--------~L~~~Gi~----a~~l~~~~~~i~t~~~~~~~~~~~~~~~~~-------~~~~~~ 183 (465)
T PRK06291 123 DYILSFGERLSAPILSG--------ALRDLGIK----SVALTGGEAGIITDSNFGNARPLPKTYERV-------KERLEP 183 (465)
T ss_pred HHHHhhhHHHHHHHHHH--------HHHhCCCC----eEEEchHHCcEEecCCCCceeechhhHHHH-------HHHHHH
Confidence 33333334446555554 68899998 8899988877777543210 000111111 246888
Q ss_pred HHhCCCcEEEcC-cccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHH
Q 010815 138 RLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSL 206 (500)
Q Consensus 138 lL~~g~IPVi~~-~~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~ 206 (500)
+++.|.|||+++ ++.+.+|...++ ++|..|+.+|.+|+|+.++++|||||++ | ++++|++++.+|+.++
T Consensus 184 ll~~~~vpVv~Gfig~~~~g~~~tlgrggsD~~A~~~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l 263 (465)
T PRK06291 184 LLKEGVIPVVTGFIGETEEGIITTLGRGGSDYSAAIIGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMEL 263 (465)
T ss_pred HhhcCcEEEEeCcEEcCCCCCEEEecCCChHHHHHHHHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHH
Confidence 899999999999 477788999888 9999999999999999999999999984 3 6899999999998888
Q ss_pred H
Q 010815 207 I 207 (500)
Q Consensus 207 ~ 207 (500)
.
T Consensus 264 ~ 264 (465)
T PRK06291 264 S 264 (465)
T ss_pred H
Confidence 4
|
|
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-12 Score=130.33 Aligned_cols=123 Identities=20% Similarity=0.223 Sum_probs=98.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccC-CHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
+.||+++++|++.+.+|+.+.+.. ++.+. ..+.+...+ ..++++..++++||++.+........++|..++|+|+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~-~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~ 194 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPT-YPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPE 194 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhcc-CCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHH
Confidence 579999999999999999886543 22222 223333333 3467788899999999875444456789999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|||+|+|+.|++++++++++.|++.+++.+ ..+..+|+|+||+..+..
T Consensus 195 yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l 246 (266)
T TIGR03827 195 YRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGTL 246 (266)
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccEE
Confidence 999999999999999999999999988877 467899999999998765
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.5e-12 Score=109.04 Aligned_cols=103 Identities=30% Similarity=0.474 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHHHHcCcCcc---------CCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 349 DLSGIKQIIQPLVESGALVR---------RTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 349 D~~~I~~L~~~~~~~~~~~~---------~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
|++++.+|+.+.+....... .+.+.+...+ ..+++++.+++++|++.+. ...+|..++|+|+
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~-----~~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE-----PDGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE-----TCEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc-----CCCeEEEEEEChh
Confidence 78899999988666543221 3455555554 3589999999999999986 2344899999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCC
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 457 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF 457 (500)
|||+|+|+.|++++++++++ +++.+.+.. ..+.+||+++||
T Consensus 76 ~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 76 YRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp GTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred hcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 99999999999999999977 898888877 579999999998
|
|
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.9e-12 Score=111.13 Aligned_cols=124 Identities=22% Similarity=0.293 Sum_probs=99.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcC---cCccCCHHHHHhh------cCcEEEEEE---CCeEEEEEEEeeecCC----
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKA------LDSFYVVER---EGQIIACAALFPFFKE---- 402 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~---~~~~~s~~~~~~~------l~~~~v~~~---dg~IVG~~~l~~~~~~---- 402 (500)
..+||.+++.|.+.|.+|++++..-+ .+...+.+.+.+. +..++++.. +..++|++.+....+.
T Consensus 3 ~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k 82 (163)
T KOG3216|consen 3 NIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGK 82 (163)
T ss_pred ceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccccccccc
Confidence 46799999999999999999864432 2344455555553 234555544 7899999999865543
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
...+|.+++|.|+|||+|+|+.|++.+-+.|.+.|+.++...+ .+|+.||+|.|++..+.
T Consensus 83 ~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 83 QGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred ceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 4568999999999999999999999999999999999998888 68999999999998654
|
|
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.5e-12 Score=102.25 Aligned_cols=75 Identities=32% Similarity=0.524 Sum_probs=68.8
Q ss_pred EEECCeEEEEEEEeeecCC----CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhC
Q 010815 384 VEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 455 (500)
Q Consensus 384 ~~~dg~IVG~~~l~~~~~~----~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~ 455 (500)
+++++++||++.+...... ...+|..++|+|+|||+|+|+.|++++++++++.+++.+.+.+ ..+.+||+|+
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 4689999999999876553 7899999999999999999999999999999999999999988 5689999999
Q ss_pred CCe
Q 010815 456 GFR 458 (500)
Q Consensus 456 GF~ 458 (500)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
|
3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A .... |
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.5e-12 Score=115.19 Aligned_cols=121 Identities=25% Similarity=0.388 Sum_probs=90.3
Q ss_pred cccccCCcccHH-HHHHHHHHHHHcCcCccCCHHHHHhhc---------CcEEEEEE--CCeEEEEEEEeee-----cCC
Q 010815 340 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPF-----FKE 402 (500)
Q Consensus 340 ~~iR~a~~~D~~-~I~~L~~~~~~~~~~~~~s~~~~~~~l---------~~~~v~~~--dg~IVG~~~l~~~-----~~~ 402 (500)
+.||+++.+|++ .+.+++...... .+++.+.+.+.+ ..++++++ +++++|++.+... ...
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 7 FKVRRLEISDKSKGFLELLQQLTVV---GDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred eEEeEhhhcccchHHHHHHHhccCC---CCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 469999999988 588887654222 234444443332 12445555 6899999887422 112
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
..+++..++|+|+|||+|+|+.|++.++++|++.|++++.+.+ ..+.+||+|+||+..+..
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~g~~ 145 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRKEIQ 145 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEehhh
Confidence 4567888999999999999999999999999999999999998 445789999999987644
|
|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.9e-12 Score=118.55 Aligned_cols=123 Identities=18% Similarity=0.212 Sum_probs=93.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcC-cCccCC-HH----HHHh----hc----Cc--EEEEEECCeEEEEEEEeeecCCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRT-DE----ELLK----AL----DS--FYVVEREGQIIACAALFPFFKEK 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~s-~~----~~~~----~l----~~--~~v~~~dg~IVG~~~l~~~~~~~ 403 (500)
..||+++.+|.+.+.+++.+..... +..++. .+ .+.. .. .. +++...+++++|++.+.... ..
T Consensus 44 ~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~-~~ 122 (191)
T TIGR02382 44 PGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELN-DT 122 (191)
T ss_pred CcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecC-CC
Confidence 4799999999999999998764321 211211 11 1111 11 12 23445678999999997543 34
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++++.++|+|+|||+|+|+.|+++++++++++|+.+|.+.+ ..+++||+|+||+..+..
T Consensus 123 ~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 123 DARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 578999999999999999999999999999999999999987 579999999999987654
|
This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583). |
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.4e-12 Score=113.19 Aligned_cols=120 Identities=23% Similarity=0.240 Sum_probs=91.1
Q ss_pred cCCcccHHHHHHHHHHHHHcCcC----ccC-CH---HHHHhhc-CcEEEEEECCeEEEEEEEeeec-----CCCeEEEEE
Q 010815 344 TAKVTDLSGIKQIIQPLVESGAL----VRR-TD---EELLKAL-DSFYVVEREGQIIACAALFPFF-----KEKCGEVAA 409 (500)
Q Consensus 344 ~a~~~D~~~I~~L~~~~~~~~~~----~~~-s~---~~~~~~l-~~~~v~~~dg~IVG~~~l~~~~-----~~~~~~I~~ 409 (500)
-++.+|++.|.+|+.+....... .+. .. +.+...- ..+++++++|++||++.+...+ +...+.|..
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~ 90 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTES 90 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEEE
Confidence 47889999999998772111111 111 11 2222222 4577888899999988886543 225678999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcH---HHHHHHHhCCCeEecee
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFRECSIE 463 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~---~a~~fYek~GF~~~~~~ 463 (500)
++|+|++||+|||+.|+++++++|+++||..+++..+ ....||.++|++.....
T Consensus 91 l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~~~~~~~ 147 (154)
T PHA00673 91 IFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGYRETNRT 147 (154)
T ss_pred EEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCchhhchh
Confidence 9999999999999999999999999999999999884 57999999999987654
|
|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.9e-11 Score=119.65 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCce-------------eeCC------------------c-cCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------------YLGR------------------Y-RIT 54 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~-------------~~~g------------------~-r~t 54 (500)
+.++++-|.. ...|.++|+|.++-..++..|.++..... ..+. + ...
T Consensus 19 ~~~v~~ii~~-~~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~~~L~~~~~~~~~~l~~~~~~~~~~~ 97 (341)
T PRK08373 19 FEEALELVKY-LSEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFAKRLGIDLEILSPYLKKLFNSRPDLP 97 (341)
T ss_pred HHHHHHHHHH-HhcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhhccC
Confidence 3444444442 34688999999997777666544321100 0000 0 112
Q ss_pred CHHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeE----eee
Q 010815 55 DSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV----KKV 130 (500)
Q Consensus 55 ~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v----~~v 130 (500)
++...+.+......++..+.+. .|+++|++ +..+++.+- +.+... ++ ..++ ...
T Consensus 98 ~~~~~D~ils~GE~lSa~lla~--------~L~~~Gi~----a~~l~~~~~-i~t~~~--------~~-~a~i~~~~s~~ 155 (341)
T PRK08373 98 SEALRDYILSFGERLSAVLFAE--------ALENEGIK----GKVVDPWEI-LEAKGS--------FG-NAFIDIKKSKR 155 (341)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH--------HHHHCCCc----eEEEeHHHh-eeecCC--------cc-ceeechhhhhh
Confidence 3344566666666667777665 68899998 666665442 222110 00 0111 235
Q ss_pred CHHHHHHHHhCCCcEEEcCcccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH
Q 010815 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL 200 (500)
Q Consensus 131 d~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~ 200 (500)
+.+.|..+++.|.|||+++...+.+|....+ ++|..|+.||.+|+|++++|+|||||+. |+.++|++++.
T Consensus 156 ~~~~l~~~l~~g~VpVv~Gf~g~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~isy 235 (341)
T PRK08373 156 NVKILYELLERGRVPVVPGFIGNLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLVPSARLIPYLSY 235 (341)
T ss_pred hHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEcccCCH
Confidence 6789999999999999998765666776665 7999999999999999999999999983 35789999999
Q ss_pred HHHHHHH
Q 010815 201 QEADSLI 207 (500)
Q Consensus 201 ~e~~~~~ 207 (500)
+|+.++.
T Consensus 236 ~Ea~ela 242 (341)
T PRK08373 236 DEALIAA 242 (341)
T ss_pred HHHHHHH
Confidence 9998774
|
|
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.5e-12 Score=111.37 Aligned_cols=125 Identities=20% Similarity=0.163 Sum_probs=87.4
Q ss_pred cHHHHHHHHHHHHHcCcCccCCHHHHHh---hcCcEEEE-EECCe-EEEEEEEeeecC--CCeEEEEEEEEccCCcCCcH
Q 010815 349 DLSGIKQIIQPLVESGALVRRTDEELLK---ALDSFYVV-EREGQ-IIACAALFPFFK--EKCGEVAAIGVSPECRGQGQ 421 (500)
Q Consensus 349 D~~~I~~L~~~~~~~~~~~~~s~~~~~~---~l~~~~v~-~~dg~-IVG~~~l~~~~~--~~~~~I~~l~V~p~yRG~Gi 421 (500)
.++.|.+|+ ...+..+.+.-...- ...+++++ .+++. .||++.+..... ...++|..++|+++|||+||
T Consensus 26 ~l~~im~Li----~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GI 101 (165)
T KOG3139|consen 26 YLADIMRLI----DKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGI 101 (165)
T ss_pred HHHHHHHHH----hhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccH
Confidence 344566664 344444443333222 22334444 33333 588888764322 34689999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEE
Q 010815 422 GDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484 (500)
Q Consensus 422 G~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~k 484 (500)
|++|++.+++.++++|+..|.+.| ..|.++|+++||...++. ..|..++...+.++
T Consensus 102 g~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~-------~~YYlng~dA~rl~ 161 (165)
T KOG3139|consen 102 GKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRL-------FRYYLNGMDALRLK 161 (165)
T ss_pred HHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEecce-------eEEEECCcceEEEE
Confidence 999999999999999999999999 479999999999997654 34555666555554
|
|
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=9.4e-12 Score=112.38 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=86.2
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHH-----------hhc--CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-----------KAL--DSFYVVEREGQIIACAALFPFFKEKCGEV 407 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~-----------~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I 407 (500)
.||+++++|.+.+.+++.+.+........+.+... ..+ ..++++..+++++|++.+.. .++
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~~------~~i 75 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIE------HYI 75 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEehh------cee
Confidence 58999999999999999876554332222222221 111 35778888999999988752 467
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceec
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~ 464 (500)
..++|+|+|||+|+|+.|++++++.+.+. .+... ..+.+||+|+||+..+...
T Consensus 76 ~~~~v~p~~~g~GiG~~Ll~~~~~~~~~l---~v~~~-~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 76 DMLFVDPEYTRRGVASALLKPLIKSESEL---TVDAS-ITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred eeEEECHHHcCCCHHHHHHHHHHHHhhhe---Eeecc-hhhHHHHHHCCCEEeeccc
Confidence 78999999999999999999999998762 22222 5789999999999998764
|
|
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=110.38 Aligned_cols=117 Identities=21% Similarity=0.280 Sum_probs=91.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-Cc--EEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DS--FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-~~--~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
++||+++.+|++.+.++.... ...+++...+.... .. .+++..+++++|++.+.... ....+..++|+|+|
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~--~~~~~~~i~v~~~~ 75 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRA----HAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVL--DEATLFNIAVDPDY 75 (146)
T ss_pred cchhcCChhhhHHHHHHHHhc----CCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeec--CceEEEEEEECHHH
Confidence 479999999999999986432 22344444443332 22 23456789999999887533 34667889999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
||+|+|+.|++.+++++++.++..+.+.+ ..+.+||+|+||+..+.
T Consensus 76 rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~ 125 (146)
T PRK09491 76 QRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTI 125 (146)
T ss_pred ccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeee
Confidence 99999999999999999999999988876 57999999999998764
|
|
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=116.26 Aligned_cols=123 Identities=18% Similarity=0.242 Sum_probs=93.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcC-cCccC-CHH----HHHhhc---------CcEEEE-EECCeEEEEEEEeeecCCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRR-TDE----ELLKAL---------DSFYVV-EREGQIIACAALFPFFKEK 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~-s~~----~~~~~l---------~~~~v~-~~dg~IVG~~~l~~~~~~~ 403 (500)
..||+++++|++.+.+++.+.+... +..++ +.+ .+..++ ..++++ +.++++||++.+.... ..
T Consensus 47 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~-~~ 125 (194)
T PRK10975 47 TGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELN-DT 125 (194)
T ss_pred CCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecC-CC
Confidence 5699999999999999998764422 22111 111 111111 134444 4568999999987543 34
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..+|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 126 ~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~ 189 (194)
T PRK10975 126 DARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIESTA 189 (194)
T ss_pred ceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEEE
Confidence 588989999999999999999999999999999999999887 578999999999998765
|
|
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=113.18 Aligned_cols=119 Identities=19% Similarity=0.209 Sum_probs=88.3
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-CcEEEEE-ECCeEEEEEEEeeec-CCCeEEEEEEEEccCCcC
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVE-REGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-~~~~v~~-~dg~IVG~~~l~~~~-~~~~~~I~~l~V~p~yRG 418 (500)
||+++.+|++.+.+|+.+..............+.... ..+++++ .++++||++.+.... .....++..++|+|+|||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 6899999999999998764221111111111121222 3456666 467999998765332 335578889999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEe
Q 010815 419 QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 460 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~ 460 (500)
+|+|+.|+++++++++..++..+.+.+ +.+++||+|+||+..
T Consensus 81 ~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~ 126 (157)
T TIGR02406 81 KGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRG 126 (157)
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence 999999999999999999999988887 578999999999874
|
This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. |
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.7e-11 Score=111.49 Aligned_cols=123 Identities=16% Similarity=0.168 Sum_probs=91.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHc--C-cCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecC---CCeEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES--G-ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFK---EKCGEVA 408 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~--~-~~~~~s~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~~~---~~~~~I~ 408 (500)
+.||+++.+|++.+.+++.+.... . .....+.+.+...+ ..++++..++++||++.+..... ...+++
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~- 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF- 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE-
Confidence 579999999999999998643111 0 11122334444433 23567778899999999874322 223454
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++.+++++++ .++..+.+.+ +++++||+|+||+..+..
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 142 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTG 142 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeec
Confidence 599999999999999999999999988 6888888776 579999999999998763
|
|
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.6e-11 Score=108.18 Aligned_cols=121 Identities=26% Similarity=0.422 Sum_probs=90.7
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCcc----CCHHHHHhhc--------CcEEEEEE-CCeEEEEEEEeeecC-CCeEEE
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL--------DSFYVVER-EGQIIACAALFPFFK-EKCGEV 407 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~----~s~~~~~~~l--------~~~~v~~~-dg~IVG~~~l~~~~~-~~~~~I 407 (500)
||+++++|++.+.+++.+.....+... .+.+...+++ ..++++.. +|++||++.+..... ...+++
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 699999999999999987543333321 2222332222 34566665 999999999986543 355666
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a-~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|.|+||++|+|+.|+..++++| ++.|++++++.+ .++++||+++||+..+..
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~ 140 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGEL 140 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEE
Confidence 5888899999999999999999999 889999999888 689999999999998754
|
... |
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=111.60 Aligned_cols=126 Identities=25% Similarity=0.292 Sum_probs=94.7
Q ss_pred cccCC-cccHHHHHHHHHHHHHcCcC-ccCC---HHHHHhhc-----CcEEEEEECCeEEEEEEEeee-----cCCCeEE
Q 010815 342 TRTAK-VTDLSGIKQIIQPLVESGAL-VRRT---DEELLKAL-----DSFYVVEREGQIIACAALFPF-----FKEKCGE 406 (500)
Q Consensus 342 iR~a~-~~D~~~I~~L~~~~~~~~~~-~~~s---~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~-----~~~~~~~ 406 (500)
||+++ .+|++.|.+++.+.....+. ...+ .+.+.+.+ ...+++..||+++|++.+... ..+....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 68999 99999999999775433332 2222 23333333 247888999999999988641 1346778
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceeccch
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~ 467 (500)
++.++++|+|||+|+|+.+++.+++.+.+. ++++|.+.+ .+++++|+|+||+.++..++|.
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~~~~ 146 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFEFPD 146 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEEESS
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEECCC
Confidence 889999999999999999999999999876 799999999 5799999999999999987774
|
|
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-10 Score=109.52 Aligned_cols=199 Identities=18% Similarity=0.118 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++.+|+.+...|.++.||-|||...--. ..+.| .++...+..-++...+|..+.+. +
T Consensus 30 i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~g-----------~~r~~~D~mGmlaTvmNal~L~~--------a 90 (238)
T COG0528 30 LDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAAAG-----------MDRVTADYMGMLATVMNALALQD--------A 90 (238)
T ss_pred HHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHcC-----------CchhhhhHHHHHHHHHHHHHHHH--------H
Confidence 5789999999999999999999999765333 33323 24455666666777788755553 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|.+.|+++ ..++......+ ....+.....+.|+.|-|+|.+.-...+ .-+.|+
T Consensus 91 L~~~~~~~----~v~sai~~~~~------------------~e~~~~~~A~~~l~~grVvIf~gGtg~P-----~fTTDt 143 (238)
T COG0528 91 LERLGVDT----RVQSAIAMPQV------------------AEPYSRREAIRHLEKGRVVIFGGGTGNP-----GFTTDT 143 (238)
T ss_pred HHhcCCcc----eecccccCccc------------------cCccCHHHHHHHHHcCCEEEEeCCCCCC-----CCchHH
Confidence 78888873 22232221110 1234677778889999999997643233 367899
Q ss_pred HHHHHHHHcCCCEEEEEec-Cccc-------CCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 166 VATACALAIEADKLICIID-GPIL-------DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTd-v~gv-------~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
+|+..|.+++||.|+..|+ |||+ +|+.+.+++++..|+.+....-
T Consensus 144 ~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~v--------------------------- 196 (238)
T COG0528 144 AAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLKV--------------------------- 196 (238)
T ss_pred HHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCee---------------------------
Confidence 9999999999999999995 9998 3578999999999977663110
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
|- ..|...+.+++++ +.++|...+
T Consensus 197 -----------------------------------------------------mD--~tA~~l~~~~~i~-i~Vfn~~~~ 220 (238)
T COG0528 197 -----------------------------------------------------MD--PTAFSLARDNGIP-IIVFNINKP 220 (238)
T ss_pred -----------------------------------------------------ec--HHHHHHHHHcCCc-EEEEeCCCC
Confidence 10 3355566778887 889999999
Q ss_pred ceeeehhhhcCCCcceee
Q 010815 318 GVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~ 335 (500)
++ +..++.++..||.|.
T Consensus 221 ~~-l~~~~~ge~~gT~V~ 237 (238)
T COG0528 221 GN-LKRALKGEEVGTIVE 237 (238)
T ss_pred cc-HHHHHcCCCCceEec
Confidence 98 566667778899885
|
|
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-11 Score=111.23 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=90.1
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh----cCcEEEEEECCeEEEEEEEeeecC-CCeEEEEEEEEccCC
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPEC 416 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~----l~~~~v~~~dg~IVG~~~l~~~~~-~~~~~I~~l~V~p~y 416 (500)
+..++.+++.++..+..+.+-.+...+.. +++.. ....+++..+++++|++.+.+..+ ....+|+.++|+|+|
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~~--e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~ 86 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPYQ--DIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEAL 86 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCcc--ccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHH
Confidence 45667777888888888876555443322 22221 122345567899999999985432 235799999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 417 RGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
||+|+|+.|++++++++++. +.+.+.+.+ ..+.+||+|+||+..+..
T Consensus 87 rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 87 RGEKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEV 135 (153)
T ss_pred hCCCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCCc
Confidence 99999999999999999875 677888877 457899999999998765
|
|
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.7e-11 Score=105.69 Aligned_cols=109 Identities=24% Similarity=0.401 Sum_probs=84.9
Q ss_pred cHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHH
Q 010815 349 DLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424 (500)
Q Consensus 349 D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~ 424 (500)
|.+.+.++....+ ..+++.+.+...+ ..+++..++++++|++.+.... ...++..++|+|+|||+|+|+.
T Consensus 1 d~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~--~~~~i~~~~v~~~~rg~G~g~~ 74 (131)
T TIGR01575 1 DLKAVLEIEAAAF----AFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVL--DEAHILNIAVKPEYQGQGIGRA 74 (131)
T ss_pred CHHHHHHHHHhhC----CCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecC--CCeEEEEEEECHHHcCCCHHHH
Confidence 5677777754433 3355656555544 2355666789999999987433 4567889999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 425 LLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 425 Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|++++++++++.+++.+.+.+ ..+.+||+++||+..+..
T Consensus 75 ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~ 117 (131)
T TIGR01575 75 LLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIR 117 (131)
T ss_pred HHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccccc
Confidence 999999999999999998876 468999999999987653
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. |
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.6e-11 Score=96.12 Aligned_cols=75 Identities=36% Similarity=0.698 Sum_probs=64.0
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCe
Q 010815 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 458 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~ 458 (500)
.+++++++++++|++.+.+.. ...+|..++|+|+|||+|+|+.|++++++.+.. +.+++.+ +.+.+||+++||+
T Consensus 4 ~~~~~~~~~~ivG~~~~~~~~--~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~~~GF~ 78 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWPNE--DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYEKLGFE 78 (79)
T ss_dssp EEEEEEETTEEEEEEEEEETT--TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHHHTTEE
T ss_pred EEEEEEECCEEEEEEEEEEcC--CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHHHCcCC
Confidence 578889999999999997443 488999999999999999999999999988843 4566766 6799999999998
Q ss_pred E
Q 010815 459 E 459 (500)
Q Consensus 459 ~ 459 (500)
+
T Consensus 79 ~ 79 (79)
T PF13508_consen 79 E 79 (79)
T ss_dssp E
T ss_pred C
Confidence 5
|
... |
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.7e-11 Score=107.66 Aligned_cols=126 Identities=18% Similarity=0.247 Sum_probs=99.2
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCC----CeEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKE----KCGEVAAI 410 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~----~~~~I~~l 410 (500)
.+.||..++.|++.+.++.++.+..+. .....+.+...- ...+|+.+++++||++.+++..-. ...-++.+
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~~~~-e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPL 81 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFGPGR-EAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPL 81 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhhcch-HHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeE
Confidence 456999999999999999888777221 111222333322 346788888999999999875322 34568899
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccch
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~ 467 (500)
+|+|+|||||||++|++..++.++..|+..+.+.- ...||.++||+......++.
T Consensus 82 aV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlG--dp~YY~rfGF~~~~~~~l~~ 136 (171)
T COG3153 82 AVDPEYQGQGIGSALVREGLEALRLAGASAVVVLG--DPTYYSRFGFEPAAGAKLYA 136 (171)
T ss_pred EEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEec--CcccccccCcEEcccccccc
Confidence 99999999999999999999999999999988865 67899999999998776663
|
|
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-10 Score=105.52 Aligned_cols=124 Identities=28% Similarity=0.325 Sum_probs=100.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc----C---cEEEEEEC-CeEEEEEEEeeecCC----C
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL----D---SFYVVERE-GQIIACAALFPFFKE----K 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l----~---~~~v~~~d-g~IVG~~~l~~~~~~----~ 403 (500)
+.||+++..|++.|.++|+........ .+.+.+.+..|. . .++|+..+ |+++|++.+.++... .
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 469999999999999999987766543 445677777665 1 46666555 999999999876432 2
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
..+ ..++|+|+.||+|+|++|++.+++.+..+|++.+.... ..+.++++++||+..+...
T Consensus 82 tve-~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~ 145 (169)
T COG1247 82 TVE-LSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTFP 145 (169)
T ss_pred EEE-EEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEecccc
Confidence 334 49999999999999999999999999999998887776 4789999999999998763
|
|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.7e-11 Score=128.47 Aligned_cols=122 Identities=18% Similarity=0.238 Sum_probs=93.5
Q ss_pred cccccC-CcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEE--CCeEEEEEEEeee-----cCCCeEEE
Q 010815 340 EGTRTA-KVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER--EGQIIACAALFPF-----FKEKCGEV 407 (500)
Q Consensus 340 ~~iR~a-~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~--dg~IVG~~~l~~~-----~~~~~~~I 407 (500)
+.||++ +..|++.+.+++.... ..+++.+.+.... ..++++.+ ++++||++..... ......++
T Consensus 83 ~~IR~~~~~~D~~~I~~L~~~~~----~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i 158 (547)
T TIGR03103 83 FTVRRLRGPADVDAINRLYAARG----MVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSL 158 (547)
T ss_pred cEEEeCCChhHHHHHHHHHHhcC----CCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEE
Confidence 579997 6899999999987632 2233434333322 34677764 6899999875321 11234688
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
..++|+|+|||+|+|+.|+++++++++++|+..+.+.+ ..+++||+|+||+.+.....
T Consensus 159 ~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y~~ 220 (547)
T TIGR03103 159 WCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPVFAL 220 (547)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeEEEE
Confidence 99999999999999999999999999999999999987 57899999999998865543
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-10 Score=102.84 Aligned_cols=114 Identities=18% Similarity=0.266 Sum_probs=81.6
Q ss_pred cccccCCcccHHHHHHHHHHHHHc--CcCccCCHHHHHhhc------CcEEEE-EECCeEEEEEEEeeecCCCeEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL------DSFYVV-EREGQIIACAALFPFFKEKCGEVAAI 410 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~--~~~~~~s~~~~~~~l------~~~~v~-~~dg~IVG~~~l~~~~~~~~~~I~~l 410 (500)
+.||+++.+|.+.+.+++.+.... .+..+.+.+.+...+ ..++++ ..++++||++.+.. .++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~------~~~~~~ 75 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG------GHMEAL 75 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec------CcEeEE
Confidence 468999999999999998764332 122222333333322 223444 46789999998752 245689
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
+|+|+|||+|+|+.|++++++.+.+ +.+.+ +++.+||+|+||+..+...
T Consensus 76 ~v~p~~rgkGig~~Ll~~~~~~~~~-----i~~~v~~~N~~a~~~yek~Gf~~~~~~~ 128 (145)
T PRK10514 76 FVDPDVRGCGVGRMLVEHALSLHPE-----LTTDVNEQNEQAVGFYKKMGFKVTGRSE 128 (145)
T ss_pred EECHHhccCCHHHHHHHHHHHhccc-----cEEEeecCCHHHHHHHHHCCCEEecccc
Confidence 9999999999999999999987532 33333 5799999999999987754
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.3e-10 Score=116.91 Aligned_cols=122 Identities=16% Similarity=0.227 Sum_probs=96.4
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCc-CccCCHHHHHhhcC--cEEEEE--E---CCeEEEEEEEeeecCCCeEEEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALD--SFYVVE--R---EGQIIACAALFPFFKEKCGEVA 408 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l~--~~~v~~--~---dg~IVG~~~l~~~~~~~~~~I~ 408 (500)
+|.++||++++.|++.+.+|..+..+-.. ...++.+++...+. .++++. + ++.+||++.+.. ....++|.
T Consensus 184 ~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~d~~gd~givG~~~~~~--~~~~~~I~ 261 (320)
T TIGR01686 184 ELSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMSDRFGDSGIIGIFVFEK--KEGNLFID 261 (320)
T ss_pred CCEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEEecCCCCceEEEEEEEe--cCCcEEEE
Confidence 44467999999999999999877633222 23556677766552 344443 2 578999998764 34578899
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEe
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFREC 460 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~ 460 (500)
.++|+|.|||+|+|+.||++++++|++.|++.+.+.+ .+++.||+++||+..
T Consensus 262 ~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 262 DLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 9999999999999999999999999999999988865 478999999999864
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.2e-10 Score=116.84 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=133.2
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCce-----------------eeC-------------------
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-----------------YLG------------------- 49 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~-----------------~~~------------------- 49 (500)
.+..+++-++.....|.++|+|-.++.-++..|.++.-... ...
T Consensus 18 ~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~ 97 (447)
T COG0527 18 RILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDPFIAARLAEVIAEFKKVL 97 (447)
T ss_pred HHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHHhhcchhhhhHhhhHhhhhHHh
Confidence 56777888888788899999999998755555443332100 000
Q ss_pred ----CccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceee
Q 010815 50 ----RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 125 (500)
Q Consensus 50 ----g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G 125 (500)
-+...++..++.+.-.-..++..+.++ +|+..|++ +..+.+.+..+.+....+ ..
T Consensus 98 ~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~--------~L~~~Gv~----A~~~~~~~~~i~t~~~~~---------~a 156 (447)
T COG0527 98 LGIALLGEVSPRERDELLSLGERLSAALLAA--------ALNALGVD----ARSLDGRQAGIATDSNHG---------NA 156 (447)
T ss_pred hhhhhccCCCHHHHHHHHhhchHHHHHHHHH--------HHHhCCCc----eEEEchHHceeeecCccc---------cc
Confidence 011225566666666666667777665 68999998 778887776666643211 22
Q ss_pred eEeeeCHHH-HHHHHhCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCc
Q 010815 126 EVKKVDVTR-MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGH 193 (500)
Q Consensus 126 ~v~~vd~~~-I~~lL~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~ 193 (500)
++...+.+. |..+++.+.|||+++. +.+++|+...+ -+|..|+.||..|+||.+-+.|||||+ | |+.+
T Consensus 157 ~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDPRiVp~Ar 236 (447)
T COG0527 157 RILDEDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTADPRIVPDAR 236 (447)
T ss_pred ccchhhhhhhHHHHhcCCcEEEecCceeecCCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCCCCCCCcce
Confidence 344456666 9999999999999985 77778887766 479999999999999999999999998 4 4799
Q ss_pred cccccCHHHHHHHHHh
Q 010815 194 LIRFLTLQEADSLIRQ 209 (500)
Q Consensus 194 ~I~~i~~~e~~~~~~~ 209 (500)
+|+.|+.+|+.++..-
T Consensus 237 ~i~~isyeEa~ELA~~ 252 (447)
T COG0527 237 LLPEISYEEALELAYL 252 (447)
T ss_pred EcCccCHHHHHHHHHC
Confidence 9999999999999644
|
|
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=105.79 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=93.6
Q ss_pred ccccccccCCcccHH--HHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEE---CC----eEEEEEEEeeecCC-
Q 010815 337 DLYEGTRTAKVTDLS--GIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER---EG----QIIACAALFPFFKE- 402 (500)
Q Consensus 337 d~~~~iR~a~~~D~~--~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~---dg----~IVG~~~l~~~~~~- 402 (500)
.....+|+++..|.+ .+..+....+... .+|+...+...+ ..+++... ++ +++|++........
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~ 86 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIR--LPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRP 86 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCC--CcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCc
Confidence 344578899999988 6666643322221 456666665544 34555554 33 59999999644332
Q ss_pred ---CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC-CEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 403 ---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL-DMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ---~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~-~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|||++|++++++.+++.+. ..+.+.+ ..|+.||+|+||+.....
T Consensus 87 ~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~ 155 (177)
T COG0456 87 SADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIR 155 (177)
T ss_pred cccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEEEeee
Confidence 278999999999999999999999999999999886 7888888 579999999999997654
|
|
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-09 Score=110.67 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=66.2
Q ss_pred eeCHHHHHHHHhCCCcEEEcCcccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCcccccc
Q 010815 129 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 198 (500)
Q Consensus 129 ~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i 198 (500)
..+.+.+..+++.|.|||+++..-+.+|...++ ++|.+|+.+|..|+|+.++++|||||++ ++.++|+.+
T Consensus 144 ~~~~~~l~~~l~~g~IpVv~Gf~~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 144 KRNAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 457788999999999999998755666766665 7999999999999999999999999983 346789999
Q ss_pred CHHHHHHH
Q 010815 199 TLQEADSL 206 (500)
Q Consensus 199 ~~~e~~~~ 206 (500)
+.+|+.++
T Consensus 224 sy~Ea~el 231 (327)
T TIGR02078 224 SYEEIKIA 231 (327)
T ss_pred CHHHHHHH
Confidence 99888765
|
This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between. |
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.7e-10 Score=118.55 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=94.0
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeec-----C--CCeEEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF-----K--EKCGEV 407 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~-----~--~~~~~I 407 (500)
.+.++||+++.+|++.+.+++...+.... .....+.+.... ...+++.++++++|++.+.+.. . -...+|
T Consensus 4 ~~~~~iR~~~~~D~~~i~~L~~~~f~~~~-~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i 82 (411)
T PRK01346 4 DMAITIRTATEEDWPAWFRAAATGFGDSP-SDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGV 82 (411)
T ss_pred CCCceeecCCHHHHHHHHHHHHHHcCCCC-ChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEE
Confidence 34567999999999999999876554322 111122222212 3567788899999999987532 1 146789
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
..++|+|+|||+|+|+.||+++++.++++|+..+.+.+ ...+||+|+||.....
T Consensus 83 ~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~-~~~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 83 TAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTA-SEGGIYGRFGYGPATY 136 (411)
T ss_pred EEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEEC-CchhhHhhCCCeeccc
Confidence 99999999999999999999999999999998888876 3468999999998753
|
|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-09 Score=107.61 Aligned_cols=78 Identities=21% Similarity=0.227 Sum_probs=65.6
Q ss_pred CHHHHHHHHhC-CCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCcccccc
Q 010815 131 DVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFL 198 (500)
Q Consensus 131 d~~~I~~lL~~-g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i 198 (500)
..+.|...+.. +.|||+++. +.+..|++..+ ++|..|+.+|.+|+|+.++++|||||++ | +.++|+++
T Consensus 169 ~~~~l~~~l~~~~~v~Vv~GFig~~~~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~TdV~Gvyt~DP~~~~~a~~i~~l 248 (295)
T cd04259 169 ADALLQKRLADGAQLIITQGFIARNAHGETVLLGRGGSDTSAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRL 248 (295)
T ss_pred hHHHHHHHHhcCCceeEeCCceeeCCCCCEEEECCCChHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEecee
Confidence 45677777765 679999986 77778887755 6899999999999999999999999983 3 57999999
Q ss_pred CHHHHHHHHH
Q 010815 199 TLQEADSLIR 208 (500)
Q Consensus 199 ~~~e~~~~~~ 208 (500)
+.+|+.++..
T Consensus 249 s~~ea~~l~~ 258 (295)
T cd04259 249 DYDEAQEIAT 258 (295)
T ss_pred CHHHHHHHHH
Confidence 9999999864
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine. |
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.9e-09 Score=100.43 Aligned_cols=125 Identities=11% Similarity=0.101 Sum_probs=93.5
Q ss_pred cccccccCCcccHHHHHHHHHHHHH---c--CcC-ccCCHHHHHhhcC-----------cEEEEEECCeEEEEEEEeeec
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVE---S--GAL-VRRTDEELLKALD-----------SFYVVEREGQIIACAALFPFF 400 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~---~--~~~-~~~s~~~~~~~l~-----------~~~v~~~dg~IVG~~~l~~~~ 400 (500)
+.+.+|+++.+|++.+++++.+... . ..+ ...+.++..+++. .++++..++++||++.+....
T Consensus 9 ~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~ 88 (179)
T PRK10151 9 ESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIE 88 (179)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeec
Confidence 4467999999999999999843211 1 111 1234444433331 256777789999999987543
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....+++ .+.++|+|||+|+|+.++..+++++.+ .+++++.+.+ .++.++|+|+||+..+..
T Consensus 89 ~~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~ 156 (179)
T PRK10151 89 PLNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCL 156 (179)
T ss_pred cCCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEe
Confidence 2346777 578999999999999999999999976 5799988877 579999999999998765
|
|
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.4e-09 Score=102.00 Aligned_cols=123 Identities=20% Similarity=0.214 Sum_probs=91.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCc--cC-CHHH----HHhhc----CcEEEEEECCeEEEEEEEeeecC-CCeEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALV--RR-TDEE----LLKAL----DSFYVVEREGQIIACAALFPFFK-EKCGEV 407 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~--~~-s~~~----~~~~l----~~~~v~~~dg~IVG~~~l~~~~~-~~~~~I 407 (500)
+.+|+++.+|++.+.++..+.....+.. +. .... +...+ ...|++..++++||++.+..... ...+++
T Consensus 7 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~~~ 86 (186)
T PRK15130 7 VKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEF 86 (186)
T ss_pred eEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeEEE
Confidence 5799999999999999976543211111 11 1111 11111 24677778999999999875432 345666
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.+++.+++++.+ .++.+|.+.+ .++++||+|+||+..+..
T Consensus 87 -~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~ 146 (186)
T PRK15130 87 -QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGEL 146 (186)
T ss_pred -EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEE
Confidence 699999999999999999999999975 6899998877 579999999999998653
|
|
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-09 Score=97.29 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=80.1
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCc--c--C--CHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALV--R--R--TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 411 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~--~--~--s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~ 411 (500)
.||+++.+|++.+.+++........+. . + ....+.+.. ..++++..++++||++.+... ..++.++
T Consensus 1 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~-----~~i~~~~ 75 (145)
T PRK10562 1 MIREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG-----RFVGALF 75 (145)
T ss_pred CcccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec-----cEEEEEE
Confidence 389999999999999986542211110 0 0 011111111 245677788999999988632 3577899
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
|+|+|||+|+|+.|++++++.+ ..+.+.+ ..+.+||+|+||+..+...
T Consensus 76 v~~~~rg~G~g~~ll~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~~~~ 127 (145)
T PRK10562 76 VAPKAVRRGIGKALMQHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVDSAW 127 (145)
T ss_pred ECHHHcCCCHHHHHHHHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEccccc
Confidence 9999999999999999998754 3344444 5789999999999988653
|
|
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.8e-10 Score=96.57 Aligned_cols=120 Identities=23% Similarity=0.345 Sum_probs=94.9
Q ss_pred cccccCCcccHHH-HHHHHHHHHHcCcCccCCHHHHHhhc-------CcE--EEEEE--CCeEEEEEEEeee-----cCC
Q 010815 340 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------DSF--YVVER--EGQIIACAALFPF-----FKE 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~-I~~L~~~~~~~~~~~~~s~~~~~~~l-------~~~--~v~~~--dg~IVG~~~l~~~-----~~~ 402 (500)
..+|++..+|+.. ..+++.++-..+.. +++++...+ ..+ .|+++ .++|+|.+.+... ...
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v---t~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV---TREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc---CHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 4799999999986 88888777666543 444444433 223 33443 3789999998642 234
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
..++|..++|+++|||+++|+.|+..+...+++.||-.+.|++ +...+||+|+||...+.
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~~~~ 144 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYSNAGN 144 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCccccch
Confidence 6689999999999999999999999999999999999999999 77899999999998653
|
|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.7e-09 Score=97.82 Aligned_cols=121 Identities=18% Similarity=0.182 Sum_probs=90.8
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcC---ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecC-CCeEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK-EKCGEVA 408 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~---~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~~-~~~~~I~ 408 (500)
.+|+++++|.+.+.++..+.....+. ...+.+....++ ..++++..++++||++.+..... ....+++
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g 81 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG 81 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE
Confidence 48999999999999998654332221 113333322221 24677788999999999975432 3456664
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+++.|.+| +|+|+.++..+++++.+ .++..+.+.+ ..+++||+|+||+..+..
T Consensus 82 -~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~ 139 (156)
T TIGR03585 82 -IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFEREGVF 139 (156)
T ss_pred -EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEeeee
Confidence 55999999 99999999999999985 6999998877 579999999999998754
|
Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar. |
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-09 Score=97.54 Aligned_cols=117 Identities=20% Similarity=0.186 Sum_probs=83.8
Q ss_pred cCCcccHHHHHHHHHHHHHcCcCc---cCCHH----HHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEE---EEE
Q 010815 344 TAKVTDLSGIKQIIQPLVESGALV---RRTDE----ELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE---VAA 409 (500)
Q Consensus 344 ~a~~~D~~~I~~L~~~~~~~~~~~---~~s~~----~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~---I~~ 409 (500)
.++.+|++.+..+......+. +. ..+.+ .+...+ ...++++++++++|++.+.......... +..
T Consensus 8 ~~~~~d~~~~~~l~l~~l~e~-p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~ 86 (153)
T PHA01807 8 HAKAGTPSELQGLCWLAIQEL-EEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQW 86 (153)
T ss_pred hhhhCCHHHHHHHHHHHHHhC-ccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeecccee
Confidence 466788888888876654432 21 11112 222211 2356677899999999987544332333 445
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++|+|+|||+|+|+.||+.++++|++.|+..+.+.+ .++++||++ |++.+.+
T Consensus 87 lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~--~~~~~~~ 142 (153)
T PHA01807 87 QYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRR--VKPYGQE 142 (153)
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHh--cCccCCc
Confidence 899999999999999999999999999999999888 579999997 6666544
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.2e-09 Score=106.72 Aligned_cols=123 Identities=18% Similarity=0.201 Sum_probs=89.9
Q ss_pred cccccCCc-ccHHHHHHHHHHHHHcCc-CccCCHHHHHhhc-------CcEEEEEE--CCeEEEEEEEeeec-CCCeEEE
Q 010815 340 EGTRTAKV-TDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFF-KEKCGEV 407 (500)
Q Consensus 340 ~~iR~a~~-~D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l-------~~~~v~~~--dg~IVG~~~l~~~~-~~~~~~I 407 (500)
+++|+++. .|.+.+.++....+.... ...++.+.+.... ..++++.+ ++++||++.+.... .....++
T Consensus 150 ~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i 229 (292)
T TIGR03448 150 VTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPALGEV 229 (292)
T ss_pred eEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCceeEE
Confidence 46788764 588888888766554322 1345555544321 23555655 68999997655332 2235677
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
..++|+|+|||+|+|+.|+.++++++++.|+..+.+.+ ..+.+||+|+||+....
T Consensus 230 ~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 288 (292)
T TIGR03448 230 YVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV 288 (292)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEccc
Confidence 77899999999999999999999999999999988877 47899999999998654
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.1e-09 Score=104.41 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=79.3
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEe-eeCHHHHHHHHhC-CCcEEEcCc-ccCCCCCeeec
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK-KVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~-~vd~~~I~~lL~~-g~IPVi~~~-~~~~~g~~~~i 161 (500)
.|++.|++ +..+.+.+ .+++.. +++. ..+. ....+.|+.++.. +.|||+++. +.+..|....+
T Consensus 135 ~L~~~Gi~----a~~ld~~~-~i~t~~--------~~~~-a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~G~~ttl 200 (294)
T cd04257 135 LLNQQGLD----AAWIDARE-LIVTDG--------GYLN-AVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQGETTTL 200 (294)
T ss_pred HHHhCCCC----eEEEchHH-eeEecC--------CCCc-eEechHhhHHHHHHHHhcCCCEEEecCcccCCCCCCEEEC
Confidence 68888988 66666554 222211 1111 1222 1235678887776 999999986 55667877655
Q ss_pred C---HHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHH
Q 010815 162 N---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 207 (500)
Q Consensus 162 ~---~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~ 207 (500)
. +|.+|+.+|..|+|+.++++|||||++ |++++|+.|+.+|+.++.
T Consensus 201 GRGGSD~~A~~lA~~l~a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~ 256 (294)
T cd04257 201 GRNGSDYSAAILAALLDADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELS 256 (294)
T ss_pred CCCchHHHHHHHHHHhCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHH
Confidence 3 799999999999999999999999983 457899999999998885
|
These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act |
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.1e-10 Score=111.15 Aligned_cols=76 Identities=26% Similarity=0.507 Sum_probs=67.8
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCe
Q 010815 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 458 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~ 458 (500)
.+++.++++++|||+.+.. .+|..++|+|+|||+|+|+.|+++++++++++|++.+++.+ +.+.+||+|+||+
T Consensus 7 ~~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~ 80 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFK 80 (297)
T ss_pred EEEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCE
Confidence 3566677899999998862 25889999999999999999999999999999999999998 4578999999999
Q ss_pred Eec
Q 010815 459 ECS 461 (500)
Q Consensus 459 ~~~ 461 (500)
..+
T Consensus 81 ~~~ 83 (297)
T cd02169 81 ELA 83 (297)
T ss_pred Eec
Confidence 887
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.3e-09 Score=103.71 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=84.7
Q ss_pred ccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 343 R~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
.+++++|+++|.+|+..........+++.+.. ..+ ...+++.+++++||++.+..... ...++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~-~~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVL-RGLREPGAGHTRHLVAVDSDPIVGYANLVPARG-TDPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHH-hhccccCCCCceEEEEEECCEEEEEEEEEcCCC-CcceEEEEEECHh
Confidence 46788999999999886555433334554433 322 23567778899999999875432 3467889999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
|||+|+|+.|++++++.+. ..+.+.+ ..+++||+++||+....
T Consensus 82 ~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 82 HRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred hcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 9999999999999998874 2344444 47899999999998754
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.5e-09 Score=103.46 Aligned_cols=78 Identities=19% Similarity=0.183 Sum_probs=66.5
Q ss_pred HHHHHHHHhC-CCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccC
Q 010815 132 VTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT 199 (500)
Q Consensus 132 ~~~I~~lL~~-g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~ 199 (500)
.+.++.++.. +.|||+.+. +.+..|+...+ ++|..|+.+|..|+|+.++++|||||++ +++++|++++
T Consensus 168 ~~~~~~~~~~~~~v~Vv~Gfig~~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls 247 (293)
T cd04243 168 KERLAQLLAEHGKVVVTQGFIASNEDGETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELS 247 (293)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeC
Confidence 4578888887 999999986 56677888766 4799999999999999999999999983 3579999999
Q ss_pred HHHHHHHHHh
Q 010815 200 LQEADSLIRQ 209 (500)
Q Consensus 200 ~~e~~~~~~~ 209 (500)
.+|+.++...
T Consensus 248 ~~ea~~l~~~ 257 (293)
T cd04243 248 YDEAMELAYF 257 (293)
T ss_pred HHHHHHHHhC
Confidence 9999998643
|
These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK- |
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-09 Score=97.69 Aligned_cols=106 Identities=19% Similarity=0.344 Sum_probs=76.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeec---------CCCeEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF---------KEKCGEVAAIG 411 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~---------~~~~~~I~~l~ 411 (500)
.||++..+|++++.++....+.. ..-..++++.++++++|++.+.... .+..++|..++
T Consensus 19 ~~~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~ 86 (156)
T PRK13688 19 KFREFGNQELSMLEELQANIIEN------------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLE 86 (156)
T ss_pred HHHHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEE
Confidence 46788888888888885443321 1123567777889999998774321 23567899999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
|+|+|||||+|++|++++. +.++. +.+.. ..+.+||+|+||+..+..
T Consensus 87 V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 87 VLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred ECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence 9999999999999998654 33443 33322 468999999999998766
|
|
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.3e-09 Score=91.88 Aligned_cols=118 Identities=20% Similarity=0.283 Sum_probs=85.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc---C-ccCCHHHHHhhc--------C---cEEEEEE-C-CeEEEEEEEeee-cC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL--------D---SFYVVER-E-GQIIACAALFPF-FK 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~---~-~~~s~~~~~~~l--------~---~~~v~~~-d-g~IVG~~~l~~~-~~ 401 (500)
++||+++++|++.+.++........+ . ...+.+....++ . .+|++.+ + +++||++.+... ..
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~ 81 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKN 81 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccC
Confidence 46899999999999999853222222 1 112444433332 1 1344443 3 579999999433 45
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHhCCCe
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFR 458 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a-~~~g~~~I~l~~----~~a~~fYek~GF~ 458 (500)
...++++ +.+.|+|||+|+|+.++..+++++ ++.++.++.+.+ ..+.++++|+||+
T Consensus 82 ~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 82 NNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 6788884 899999999999999999999999 467999999988 5799999999996
|
... |
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.7e-09 Score=96.93 Aligned_cols=123 Identities=11% Similarity=0.052 Sum_probs=88.3
Q ss_pred cccccCCcccHHHHHHHHHHHHH--cCcCcc-----CCHHH-------HHhhc----CcEEEEE--ECCeEEEEEEEeee
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVE--SGALVR-----RTDEE-------LLKAL----DSFYVVE--REGQIIACAALFPF 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~--~~~~~~-----~s~~~-------~~~~l----~~~~v~~--~dg~IVG~~~l~~~ 399 (500)
+.||+++.+|.+.+++++.+... ..+... .+.+. +.... ...|++. .++++||++.+...
T Consensus 18 l~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~ 97 (194)
T PRK10809 18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNV 97 (194)
T ss_pred EEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEee
Confidence 57999999999999999875221 111100 00111 11111 1234443 36799999999754
Q ss_pred cCC--CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 FKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 ~~~--~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
... ..+++ .+.|+|+|||+|+|+.+++.+++++.+ .|+++|.+.+ .+|+++|+|+||+..+..
T Consensus 98 ~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~ 167 (194)
T PRK10809 98 VRGSFHACYL-GYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYA 167 (194)
T ss_pred cCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeee
Confidence 321 34566 688999999999999999999999987 5999999988 589999999999987643
|
|
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.2e-08 Score=104.19 Aligned_cols=82 Identities=26% Similarity=0.434 Sum_probs=71.8
Q ss_pred hhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHh
Q 010815 376 KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKS 454 (500)
Q Consensus 376 ~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek 454 (500)
...+.++++.+++++|||+.+.. ..|.+++|+|+|||+|+|+.|+.++++++++.|+..+++.| +...+||++
T Consensus 28 ~~~d~~vv~~~~~~lVg~g~l~g------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~k 101 (332)
T TIGR00124 28 APLEIFIAVYEDEEIIGCGGIAG------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEY 101 (332)
T ss_pred CCCCEEEEEEECCEEEEEEEEec------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHH
Confidence 34466788888999999999852 24889999999999999999999999999999999999999 456889999
Q ss_pred CCCeEecee
Q 010815 455 RGFRECSIE 463 (500)
Q Consensus 455 ~GF~~~~~~ 463 (500)
+||......
T Consensus 102 lGF~~i~~~ 110 (332)
T TIGR00124 102 CGFKTLAEA 110 (332)
T ss_pred cCCEEeeee
Confidence 999998754
|
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. |
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.9e-08 Score=96.44 Aligned_cols=130 Identities=15% Similarity=0.164 Sum_probs=96.0
Q ss_pred HHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHH
Q 010815 58 SLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRE 137 (500)
Q Consensus 58 ~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~ 137 (500)
..+.+...-..++..+.+. .|++.|++ +.-+++.+-++++.... + ...+.....+.+..
T Consensus 111 ~~d~i~s~GE~lSa~ll~~--------~L~~~Gi~----a~~ld~~~~~i~t~~~~--------~-~a~~~~~~~~~~~~ 169 (288)
T cd04245 111 LLDALKARGEYLNAQLMAA--------YLNYQGID----ARYVIPKDAGLVVTDEP--------G-NAQILPESYQKIKK 169 (288)
T ss_pred HHHHHHHHhHHHHHHHHHH--------HHHHCCCC----eEEEcHHHCceeecCCc--------c-ccccchhhHHHHHH
Confidence 3343344444556666664 68889988 66666555444432211 1 11233346788999
Q ss_pred HHhCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHH
Q 010815 138 RLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSL 206 (500)
Q Consensus 138 lL~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~ 206 (500)
+++.+-|||+++. +.+..|+...+ .+|..|+.+|.+|+|+.+.+.|||||+ | |+.+.|++++.+|+.++
T Consensus 170 ~~~~~~v~Vv~Gf~g~~~~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~el 249 (288)
T cd04245 170 LRDSDEKLVIPGFYGYSKNGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMREL 249 (288)
T ss_pred HHhCCCEEEEeCccccCCCCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHHH
Confidence 9999999999985 77788999988 899999999999999999999999998 3 46889999999999998
Q ss_pred HH
Q 010815 207 IR 208 (500)
Q Consensus 207 ~~ 208 (500)
..
T Consensus 250 a~ 251 (288)
T cd04245 250 SY 251 (288)
T ss_pred HH
Confidence 64
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine. |
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.9e-08 Score=103.05 Aligned_cols=126 Identities=17% Similarity=0.215 Sum_probs=87.3
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeE-----eeeCHHH
Q 010815 60 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-----KKVDVTR 134 (500)
Q Consensus 60 ~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v-----~~vd~~~ 134 (500)
+.+...-..++..+.+. +|++.|++ +..+.+.+- +++... ++. .++ .....+.
T Consensus 110 d~i~s~GE~lSa~l~~~--------~L~~~Gi~----a~~l~~~~~-i~t~~~--------~~~-~~~~~~~~~~~~~~~ 167 (448)
T PRK09084 110 DELVSHGELMSTLLFVE--------LLRERGVQ----AEWFDVRKV-MRTDDR--------FGR-AEPDVAALAELAQEQ 167 (448)
T ss_pred hhhhhHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHe-EEecCC--------CCc-ccccHHHHHHHHHHH
Confidence 33333344456555554 68899998 666665442 232111 110 111 1111245
Q ss_pred HHHHHhCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHH
Q 010815 135 MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEA 203 (500)
Q Consensus 135 I~~lL~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~ 203 (500)
+..+++.+ |||+++. +.+..|....+ .+|..|+.+|..|+|+.+++.|||||+ | |+.++|++++.+|+
T Consensus 168 ~~~~~~~~-v~Vv~Gf~g~~~~G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea 246 (448)
T PRK09084 168 LLPLLAEG-VVVTQGFIGSDEKGRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEA 246 (448)
T ss_pred HHHhhcCC-cEEecCeeecCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEcccCCHHHH
Confidence 66677888 9999885 66778888766 899999999999999999999999998 3 45889999999999
Q ss_pred HHHHH
Q 010815 204 DSLIR 208 (500)
Q Consensus 204 ~~~~~ 208 (500)
.++..
T Consensus 247 ~ela~ 251 (448)
T PRK09084 247 AEMAT 251 (448)
T ss_pred HHHHh
Confidence 98853
|
|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.9e-08 Score=103.56 Aligned_cols=77 Identities=19% Similarity=0.163 Sum_probs=63.2
Q ss_pred HHHHHHHHhCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH
Q 010815 132 VTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL 200 (500)
Q Consensus 132 ~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~ 200 (500)
....+..++.+.|||+++. +.++.|+...+ ++|..|+.+|..|+||.++++|||||++ ++.++|++++.
T Consensus 155 ~~~~~~~~~~~~v~Vv~GF~g~~~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~ 234 (440)
T PRK05925 155 TAWHELALQEDAIYIMQGFIGANSSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSF 234 (440)
T ss_pred HHHHHhhccCCcEEEecCcceeCCCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECH
Confidence 3334445677889999986 77788886644 7999999999999999999999999983 35789999999
Q ss_pred HHHHHHHH
Q 010815 201 QEADSLIR 208 (500)
Q Consensus 201 ~e~~~~~~ 208 (500)
+|+.++..
T Consensus 235 ~ea~ela~ 242 (440)
T PRK05925 235 EEMQNLAS 242 (440)
T ss_pred HHHHHHHh
Confidence 99888753
|
|
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.5e-08 Score=111.76 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=65.6
Q ss_pred eCHHHHHHHHhCC-CcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccc
Q 010815 130 VDVTRMRERLDGG-CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRF 197 (500)
Q Consensus 130 vd~~~I~~lL~~g-~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~ 197 (500)
.+...++.+++.+ .|||+.+. +.+..|+...+ ++|..|+.+|.+|+||+++++|||||++ | +.++|++
T Consensus 177 ~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~ 256 (861)
T PRK08961 177 SDPALRERFAAQPAQVLITQGFIARNADGGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTR 256 (861)
T ss_pred hHHHHHHHHhccCCeEEEeCCcceeCCCCCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEecc
Confidence 3566778888766 49999885 66777876654 7899999999999999999999999983 3 5689999
Q ss_pred cCHHHHHHHHH
Q 010815 198 LTLQEADSLIR 208 (500)
Q Consensus 198 i~~~e~~~~~~ 208 (500)
++.+|+.++..
T Consensus 257 ls~~e~~el~~ 267 (861)
T PRK08961 257 LDYDEAQEIAT 267 (861)
T ss_pred cCHHHHHHHHH
Confidence 99999998864
|
|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.1e-07 Score=96.11 Aligned_cols=69 Identities=22% Similarity=0.264 Sum_probs=58.9
Q ss_pred CCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHHHHh
Q 010815 141 GGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 209 (500)
Q Consensus 141 ~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~~~~ 209 (500)
.+.|||+++. +.+..|+...+ .+|..|+.+|..|+|+.+++.|||+|+ | +++++|+.|+.+|+.++...
T Consensus 189 ~~~v~Vv~GFig~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~ 268 (306)
T cd04247 189 ENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY 268 (306)
T ss_pred CCceEEeeccEecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC
Confidence 5679999985 66677887766 489999999999999999999999998 3 35789999999999998643
|
Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. |
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.2e-07 Score=84.66 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=84.5
Q ss_pred hCCCcEEEcCcc----cCCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC---CCCccccccCHHHHHHHHHhhhh
Q 010815 140 DGGCLVILSNLG----YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---ESGHLIRFLTLQEADSLIRQRVK 212 (500)
Q Consensus 140 ~~g~IPVi~~~~----~~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~---~~g~~I~~i~~~e~~~~~~~~~~ 212 (500)
..+.+||+-|-. +|+--..--|-+|.++..+|+++++..+|+.|||||+. +++++|++|+..|++.. ...+
T Consensus 91 ~~~~~aVLLPyrlLr~~DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~~~kLv~eI~A~dl~~~-~t~v- 168 (212)
T COG2054 91 KPDAKAVLLPYRLLRKTDPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDPKGKLVREIRASDLKTG-ETSV- 168 (212)
T ss_pred CcccceEeeehHhhhcCCCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCCcchhhhhhhHhhcccC-cccc-
Confidence 445667776532 23444566788999999999999999999999999984 55789999987776541 0111
Q ss_pred hhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccch
Q 010815 213 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 292 (500)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 292 (500)
+ + +.
T Consensus 169 -----------------------------------------------------D--~---------------------~~ 172 (212)
T COG2054 169 -----------------------------------------------------D--P---------------------YL 172 (212)
T ss_pred -----------------------------------------------------c--c---------------------hh
Confidence 1 1 66
Q ss_pred HHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 293 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 293 ~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|+|. .+.+.. ..++||..|++++..+-..+..||+|.+
T Consensus 173 P~Ll-----~k~~m~-~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 173 PKLL-----VKYKMN-CRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred hHHH-----HHcCCc-eEEECCCCHHHHHHHHhccccceEEEeC
Confidence 7765 566666 7899999999998888777889999976
|
|
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.5e-09 Score=92.32 Aligned_cols=124 Identities=18% Similarity=0.199 Sum_probs=89.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEE-ECCeEEEEEEEeeec----CCCeEEEEEEEEcc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFF----KEKCGEVAAIGVSP 414 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~-~dg~IVG~~~l~~~~----~~~~~~I~~l~V~p 414 (500)
+.||.++.+|+-.+..+-..-..+.+......-....|.+..||++ .+|+|||++....+. ....++|..++|..
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~r 81 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKR 81 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehh
Confidence 3588898888776666521111111111222233344556778887 579999999887554 34578999999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHH-hCCCeEecee
Q 010815 415 ECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFK-SRGFRECSIE 463 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYe-k~GF~~~~~~ 463 (500)
.||+.|+|++||........+ .+.+.|.+.+ -.|+.+|+ .+||+..+.+
T Consensus 82 s~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve 136 (193)
T KOG3235|consen 82 SYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVE 136 (193)
T ss_pred hHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeecc
Confidence 999999999999998877765 3677888888 35899998 6999998765
|
|
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.3e-08 Score=85.69 Aligned_cols=92 Identities=23% Similarity=0.307 Sum_probs=75.4
Q ss_pred hhcCcEEEEEECCeEEEEEEEeeecC-CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEc-HHHHHHH
Q 010815 376 KALDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT-TRTADWF 452 (500)
Q Consensus 376 ~~l~~~~v~~~dg~IVG~~~l~~~~~-~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g-~~~I~l~~-~~a~~fY 452 (500)
....+++..+.++++++|+.+.+... .....|++++|+|++||+|+|++||..+++.+.+.. -+.+.+.. ...+.||
T Consensus 47 ~~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fY 126 (155)
T COG2153 47 GDTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFY 126 (155)
T ss_pred cccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHH
Confidence 34467888888999999999986432 233679999999999999999999999999998764 45677777 4579999
Q ss_pred HhCCCeEeceeccch
Q 010815 453 KSRGFRECSIEMIPE 467 (500)
Q Consensus 453 ek~GF~~~~~~~lp~ 467 (500)
.++||+.++..++.+
T Consensus 127 a~~GFv~~~e~yled 141 (155)
T COG2153 127 ASFGFVRVGEEYLED 141 (155)
T ss_pred HHhCcEEcCchhhcC
Confidence 999999998776554
|
|
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.2e-07 Score=90.73 Aligned_cols=70 Identities=20% Similarity=0.232 Sum_probs=59.3
Q ss_pred hCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHHHH
Q 010815 140 DGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 208 (500)
Q Consensus 140 ~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~~~ 208 (500)
..+.|||+++. +.+..|++..+ ++|..|+.+|..|+|+.+++.|||+|+ | |++++|+.++.+|+.++..
T Consensus 176 ~~~~v~Vv~Gf~g~~~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~ 255 (292)
T cd04258 176 LAGTVVVTQGFIGSTEKGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMAT 255 (292)
T ss_pred hcCCEEEECCccccCCCCCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHH
Confidence 45689999885 66677887754 789999999999999999999999998 3 3589999999999999864
Q ss_pred h
Q 010815 209 Q 209 (500)
Q Consensus 209 ~ 209 (500)
.
T Consensus 256 ~ 256 (292)
T cd04258 256 F 256 (292)
T ss_pred C
Confidence 3
|
AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. |
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.5e-07 Score=95.32 Aligned_cols=132 Identities=14% Similarity=0.150 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHH
Q 010815 57 ESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMR 136 (500)
Q Consensus 57 ~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~ 136 (500)
..++.+...-..++..+.+. .|++.|++ +.-+.+.+-++++... ++. ..+.....+.+.
T Consensus 110 ~~~d~l~s~GE~~S~~l~a~--------~L~~~g~~----a~~~~~~~~~~~t~~~--------~~~-a~i~~~~~~~~~ 168 (454)
T PRK09034 110 RLLDAFKARGEDLNAKLIAA--------YLNYEGIP----ARYVDPKEAGIIVTDE--------PGN-AQVLPESYDNLK 168 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHceEEecCC--------cCc-eeEcHhhHHHHH
Confidence 34444444444556666664 68888988 5566655544443211 111 123334677888
Q ss_pred HHHhCCCcEEEcCc-ccCCCCCeeec---CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHH
Q 010815 137 ERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADS 205 (500)
Q Consensus 137 ~lL~~g~IPVi~~~-~~~~~g~~~~i---~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~ 205 (500)
.++..+-|||+++. +.+..|+...+ .+|..|+.+|.+|+|+.+.+.|||||+ | |+.+.++.++.+|+.+
T Consensus 169 ~~~~~~~v~Vv~GFig~~~~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~e 248 (454)
T PRK09034 169 KLRDRDEKLVIPGFFGVTKDGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRE 248 (454)
T ss_pred HHHhcCCEEEecCccccCCCCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHH
Confidence 88888889999985 66778887766 479999999999999999999999998 3 4688999999999999
Q ss_pred HHHh
Q 010815 206 LIRQ 209 (500)
Q Consensus 206 ~~~~ 209 (500)
+...
T Consensus 249 la~~ 252 (454)
T PRK09034 249 LSYA 252 (454)
T ss_pred HHhC
Confidence 8643
|
|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.4e-07 Score=102.19 Aligned_cols=126 Identities=18% Similarity=0.197 Sum_probs=85.3
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEe-eeCHHHHHHH
Q 010815 60 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK-KVDVTRMRER 138 (500)
Q Consensus 60 ~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~-~vd~~~I~~l 138 (500)
+.+...-..++..+.++ .|++.|++ +..+...+- +++.. .++ ...+. ....+.|+++
T Consensus 120 d~i~s~GE~lSa~lla~--------~L~~~Gi~----a~~ld~~~~-i~t~~--------~~~-~~~~~~~~~~~~i~~~ 177 (819)
T PRK09436 120 AAIISRGERLSIAIMAA--------VLEARGHD----VTVIDPREL-LLADG--------HYL-ESTVDIAESTRRIAAS 177 (819)
T ss_pred hheeeHHHHHHHHHHHH--------HHHhCCCC----eEEECHHHe-EEecC--------CCC-CceechHhhHHHHHHH
Confidence 33333344446666664 68899998 555554331 22211 011 01121 1223456655
Q ss_pred H-hCCCcEEEcCc-ccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHH
Q 010815 139 L-DGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSL 206 (500)
Q Consensus 139 L-~~g~IPVi~~~-~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~ 206 (500)
+ +.+.|||+++. +.+..|+...+. +|..|+.+|..|+||.++++|||||++ |+.++|++++.+|+.++
T Consensus 178 ~~~~~~v~Vv~Gfig~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy~ea~el 257 (819)
T PRK09436 178 FIPADHVILMPGFTAGNEKGELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSYQEAMEL 257 (819)
T ss_pred HhcCCcEEEecCcccCCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecHHHHHHH
Confidence 4 46899999986 666778877775 899999999999999999999999983 45789999999999888
Q ss_pred H
Q 010815 207 I 207 (500)
Q Consensus 207 ~ 207 (500)
.
T Consensus 258 ~ 258 (819)
T PRK09436 258 S 258 (819)
T ss_pred H
Confidence 5
|
|
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-07 Score=83.10 Aligned_cols=121 Identities=21% Similarity=0.169 Sum_probs=101.2
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEE-CCeEEEEEEEeee--cCCCeEEEEEEEEccCCc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPF--FKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~-dg~IVG~~~l~~~--~~~~~~~I~~l~V~p~yR 417 (500)
++|+.+.+|+...-.+--+...+.++.......+..|.+.+.+.+. +++|-|++.-... ...+++++..+.|.|+||
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~R 82 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYR 82 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHH
Confidence 6888898898887777777778888888888899888888888764 4789898877533 234678899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
+.|+|+.||..+++.....+...+.+++ +.|+.+|+|+||....
T Consensus 83 rl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR 130 (173)
T KOG3234|consen 83 RLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYR 130 (173)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEE
Confidence 9999999999999999887777777777 5799999999999875
|
|
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=82.73 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=84.4
Q ss_pred ccHHHHHHHHHHHHH----cCcCccCCH----HHHHhhcCcEEEEEECC-eEEEEEEEeeecCC--CeEEEEEEEEccCC
Q 010815 348 TDLSGIKQIIQPLVE----SGALVRRTD----EELLKALDSFYVVEREG-QIIACAALFPFFKE--KCGEVAAIGVSPEC 416 (500)
Q Consensus 348 ~D~~~I~~L~~~~~~----~~~~~~~s~----~~~~~~l~~~~v~~~dg-~IVG~~~l~~~~~~--~~~~I~~l~V~p~y 416 (500)
++++..++|+.+... .... -|.. .++...-..|+++..++ .+||+..+....+. ...++.-+-|.++|
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~-Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~y 132 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSW-GWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAY 132 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhccc-ccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhh
Confidence 788888888876222 1111 1222 23333333455555554 89999999854433 46778888999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
||+|||+.|++.++..+..+..+.|.+.+ .++..||+++||.+.....
T Consensus 133 R~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~sp 184 (202)
T KOG2488|consen 133 RGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEESP 184 (202)
T ss_pred hccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCCCCC
Confidence 99999999999999999888777777777 6899999999999876543
|
|
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.56 E-value=8e-07 Score=72.98 Aligned_cols=58 Identities=28% Similarity=0.472 Sum_probs=48.3
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+.|..++|.|+|||+|+|+.|+..+.+.+.++|... ++.+ ..|+++|+|+||+.....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~-~l~v~~~N~~s~~ly~klGf~~~~~~ 83 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTP-FLYVDADNEASIRLYEKLGFREIEEE 83 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEE-EEEEETT-HHHHHHHHHCT-EEEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcE-EEEEECCCHHHHHHHHHcCCEEEEEE
Confidence 789999999999999999999999999999887654 3433 579999999999998654
|
This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B. |
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-07 Score=87.69 Aligned_cols=149 Identities=17% Similarity=0.209 Sum_probs=96.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCC---------CeEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE---------KCGEVAAI 410 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~---------~~~~I~~l 410 (500)
+.++..++.++..+.+|.++.+..++...+..+.... -+..-++..++..+|-.+....... ...+|..+
T Consensus 17 ~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~-~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~L 95 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSN-GDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSL 95 (187)
T ss_pred eeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhc-CCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEee
Confidence 6799999999999999976666655543322222211 1111122223344443333321111 13789999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcc-cCCceEEEE
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINL-SRNSKYYMK 484 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g-~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~-~~~s~~~~k 484 (500)
.|.|.||.+|||+.|+.++.+.+.+.. ++.+++.+ ..++.||++.||+.......- |.. ......+++
T Consensus 96 gvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~------y~~~~~~~~~~l~ 169 (187)
T KOG3138|consen 96 GVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNY------YSILGPPDDSFLR 169 (187)
T ss_pred cccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccc------cccccCcchhhhh
Confidence 999999999999999999999998877 88899988 468999999999998643211 111 133445555
Q ss_pred ecCCCCCCCCC
Q 010815 485 KLLPDTSGIIV 495 (500)
Q Consensus 485 kll~~~~~~~~ 495 (500)
+.+..+++.+.
T Consensus 170 ~~~~~~~~~~~ 180 (187)
T KOG3138|consen 170 KLLIHGSGSPP 180 (187)
T ss_pred hheecCCCCCC
Confidence 55555545443
|
|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1e-06 Score=79.62 Aligned_cols=77 Identities=22% Similarity=0.385 Sum_probs=69.5
Q ss_pred EECCeEEEEEEEeeecC-CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEec
Q 010815 385 EREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 461 (500)
Q Consensus 385 ~~dg~IVG~~~l~~~~~-~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~ 461 (500)
+...+++|...+.+... +..+++..+.|+++.||+|.|+.||+.++.|++..|.+.+++.+..-.+||+++||+.+.
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~~FYe~lGYe~c~ 140 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQCRFYESLGYEKCD 140 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccchhhhhhhcccccC
Confidence 55689999999987643 467899999999999999999999999999999999999999997669999999999875
|
|
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.3e-06 Score=89.88 Aligned_cols=133 Identities=14% Similarity=0.178 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHH
Q 010815 56 SESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRM 135 (500)
Q Consensus 56 ~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I 135 (500)
+...+.+...-..++..|.++ +|++.|++ +..+.+.+-++++... ++. ..|.....+.|
T Consensus 162 ~~~~d~ils~GE~lSa~lla~--------~L~~~Gi~----a~~lda~~~gi~t~~~--------~~~-a~i~~~~~~~l 220 (521)
T PLN02551 162 PRTRDYLVSFGERMSTRIFAA--------YLNKIGVK----ARQYDAFDIGFITTDD--------FTN-ADILEATYPAV 220 (521)
T ss_pred hHHHHHHHhHHHHHHHHHHHH--------HHHHCCCC----cEEechHHcceEecCC--------CCc-cchhhhhHHHH
Confidence 334444444455556666665 68899988 6667666655555321 110 12223344455
Q ss_pred HHHH-----hCCCcEEEcCc-ccC-CCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc---C----CCCcccccc
Q 010815 136 RERL-----DGGCLVILSNL-GYS-SSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFL 198 (500)
Q Consensus 136 ~~lL-----~~g~IPVi~~~-~~~-~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i 198 (500)
...+ +.+.|||+++. +.+ ..|+...+. +|..|+.||.+|+|+.+.+.|||||+ | ++.++|+++
T Consensus 221 ~~~l~~~~~~~~~v~Vv~GFig~~~~~G~~ttLGRGGSD~sA~~la~~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~l 300 (521)
T PLN02551 221 AKRLHGDWIDDPAVPVVTGFLGKGWKTGAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYL 300 (521)
T ss_pred HHHHHhhhccCCeEEEEcCccccCCCCCcEEecCCChHHHHHHHHHHHcCCCEEEEEeCCCceeCCCCCCCCCceEeccc
Confidence 4444 45689999985 777 788887764 79999999999999999999999998 4 468899999
Q ss_pred CHHHHHHHHHh
Q 010815 199 TLQEADSLIRQ 209 (500)
Q Consensus 199 ~~~e~~~~~~~ 209 (500)
+.+|+.++..-
T Consensus 301 sy~Ea~elA~~ 311 (521)
T PLN02551 301 TFDEAAELAYF 311 (521)
T ss_pred CHHHHHHHHhC
Confidence 99999998643
|
|
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-06 Score=84.22 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=65.3
Q ss_pred EEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEE---cHHHHHHHHhCCCeEe
Q 010815 384 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL---TTRTADWFKSRGFREC 460 (500)
Q Consensus 384 ~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~---~~~a~~fYek~GF~~~ 460 (500)
.+.||+||+.+..... .+....|..++++|+|||||++..|+..+.+..-..|.+.+... .+.|.+.|+|.||+..
T Consensus 182 ~~~d~~iVa~A~t~a~-~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~~ 260 (268)
T COG3393 182 LEGDGKIVAKAETAAE-NPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFREI 260 (268)
T ss_pred EccCCcEEEeeecccc-CCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCeec
Confidence 3445699999998743 45788999999999999999999999999999888887654333 2678999999999998
Q ss_pred cee
Q 010815 461 SIE 463 (500)
Q Consensus 461 ~~~ 463 (500)
+..
T Consensus 261 g~~ 263 (268)
T COG3393 261 GEF 263 (268)
T ss_pred ceE
Confidence 743
|
|
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.3e-06 Score=63.42 Aligned_cols=62 Identities=34% Similarity=0.483 Sum_probs=53.6
Q ss_pred EEEEECCeEEEEEEEeeecC-CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 010815 382 YVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443 (500)
Q Consensus 382 ~v~~~dg~IVG~~~l~~~~~-~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l 443 (500)
+++..+++++|++.+.+... ...+++..++|+|+|||+|+|+.|+..+++++++.++..+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45667889999999986432 467899899999999999999999999999999988888765
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera |
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.2e-06 Score=76.85 Aligned_cols=123 Identities=17% Similarity=0.286 Sum_probs=89.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCc-------cCCHHHHHhhc-------------------CcEEEEEECCeEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALV-------RRTDEELLKAL-------------------DSFYVVEREGQIIAC 393 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~-------~~s~~~~~~~l-------------------~~~~v~~~dg~IVG~ 393 (500)
+.++.-+..|.+++.++..++...+... ....+.+.+++ ..+|.+..|+++||+
T Consensus 4 ~~l~~p~L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~ 83 (174)
T COG3981 4 MKLRRPTLKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGF 83 (174)
T ss_pred ccccCCchhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEE
Confidence 3466666677777777776654443321 11113333333 146667778999999
Q ss_pred EEEeeecCC----CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 394 AALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 394 ~~l~~~~~~----~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+.+.....+ .-++| .+.|.|+.||+|+|+.+++..+++|++.|++.|.+.+ ..+.+.-+++|=...+..
T Consensus 84 i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGile~~~ 160 (174)
T COG3981 84 INLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGILENEF 160 (174)
T ss_pred EEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEEeEEE
Confidence 999753322 35677 7899999999999999999999999999999999988 468999999987766544
|
|
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.9e-06 Score=65.52 Aligned_cols=71 Identities=24% Similarity=0.326 Sum_probs=58.1
Q ss_pred EEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhC
Q 010815 382 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 455 (500)
Q Consensus 382 ~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~ 455 (500)
|.+..+|+.+|.+.+.. .++...|....|.|++||||+|+.|++.++++|+++|.+ |...|+-+.+|++++
T Consensus 2 F~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 2 FELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VVPTCSYVAKYFRRH 72 (78)
T ss_dssp EEEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EEETSHHHHHHHHH-
T ss_pred EEEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EEEECHHHHHHHHhC
Confidence 34556688999999964 567899999999999999999999999999999998764 667777788888774
|
|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.9e-06 Score=88.81 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=61.8
Q ss_pred CCeEEEEEEEeeecC-------CCeEEEEEEE-----------EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HH
Q 010815 387 EGQIIACAALFPFFK-------EKCGEVAAIG-----------VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TR 447 (500)
Q Consensus 387 dg~IVG~~~l~~~~~-------~~~~~I~~l~-----------V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~ 447 (500)
++.++|++.+..... +..+.|..+. ++|+|||+|+|+.||++++++|++.|++.+.+.+ ..
T Consensus 422 ~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s~~~ 501 (522)
T TIGR01211 422 NDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVISGIG 501 (522)
T ss_pred CCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEeeCch
Confidence 468999999974321 1234444444 3599999999999999999999999999998866 57
Q ss_pred HHHHHHhCCCeEecee
Q 010815 448 TADWFKSRGFRECSIE 463 (500)
Q Consensus 448 a~~fYek~GF~~~~~~ 463 (500)
+++||+|+||+..+..
T Consensus 502 A~~FY~klGf~~~g~y 517 (522)
T TIGR01211 502 VREYYRKLGYELDGPY 517 (522)
T ss_pred HHHHHHHCCCEEEcce
Confidence 9999999999987654
|
The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. |
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.5e-05 Score=73.40 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=65.0
Q ss_pred CeEEEEEEEeeec---CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeE
Q 010815 388 GQIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRE 459 (500)
Q Consensus 388 g~IVG~~~l~~~~---~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~ 459 (500)
+++||++.+.... .....++ .+.+.|+|||+|+|+..+..+++++.. .++.+|.+.+ .+++++++|+||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 5899999998655 2456677 677799999999999999999999987 6899999988 58999999999999
Q ss_pred ecee
Q 010815 460 CSIE 463 (500)
Q Consensus 460 ~~~~ 463 (500)
.+..
T Consensus 156 eg~~ 159 (187)
T COG1670 156 EGEL 159 (187)
T ss_pred hhhh
Confidence 8754
|
|
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=2e-05 Score=89.60 Aligned_cols=128 Identities=19% Similarity=0.199 Sum_probs=91.0
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeE-eeeCHHHHHHH
Q 010815 60 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRER 138 (500)
Q Consensus 60 ~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v-~~vd~~~I~~l 138 (500)
+.+...-..++..+.++ +|++.|++ +..+.+.+ +++.... +...+ .....+.|+.+
T Consensus 123 d~ils~GE~~Sa~lla~--------~L~~~G~~----a~~ld~~~--~i~~~~~---------~~~~i~~~~~~~~l~~~ 179 (810)
T PRK09466 123 AEVVGHGEVWSARLMAA--------LLNQQGLP----AAWLDARS--FLRAERA---------AQPQVDEGLSYPLLQQL 179 (810)
T ss_pred hheecHHHHHHHHHHHH--------HHHhCCCC----cEEEcHHH--heecCCC---------CCcccchhhhHHHHHHH
Confidence 33333444556666664 68899988 66665543 3433221 11122 12245788888
Q ss_pred HhCC--CcEEEcCc-ccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHH
Q 010815 139 LDGG--CLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADS 205 (500)
Q Consensus 139 L~~g--~IPVi~~~-~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~ 205 (500)
++.+ .|||+++. +.++.|+...+. +|..|+.||.+|+|+.+.+.|||||+ | |+.+.|++|+.+|+.+
T Consensus 180 ~~~~~~~v~Vv~GF~g~~~~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~e 259 (810)
T PRK09466 180 LAQHPGKRLVVTGFISRNEAGETVLLGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASE 259 (810)
T ss_pred HhccCCeEEEeeCccccCCCCCEEEcCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHH
Confidence 8654 89999985 667788877664 79999999999999999999999998 3 4688999999999999
Q ss_pred HHHhh
Q 010815 206 LIRQR 210 (500)
Q Consensus 206 ~~~~~ 210 (500)
+..-|
T Consensus 260 la~~G 264 (810)
T PRK09466 260 LARLA 264 (810)
T ss_pred HHHcC
Confidence 96543
|
|
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.5e-05 Score=72.66 Aligned_cols=88 Identities=22% Similarity=0.336 Sum_probs=58.6
Q ss_pred CcEEEEEECC--eEEEEEEEeeec------------------------------------CCCeEEEEEEEEccCCcCCc
Q 010815 379 DSFYVVEREG--QIIACAALFPFF------------------------------------KEKCGEVAAIGVSPECRGQG 420 (500)
Q Consensus 379 ~~~~v~~~dg--~IVG~~~l~~~~------------------------------------~~~~~~I~~l~V~p~yRG~G 420 (500)
..+|++..++ +|+|++.+.... .-....|-+++|+|++|++|
T Consensus 27 h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~~q~~G 106 (196)
T PF13718_consen 27 HRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPDLQRMG 106 (196)
T ss_dssp EEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CCC-SSS
T ss_pred ceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChhhhcCC
Confidence 4688888888 999988774210 00346788999999999999
Q ss_pred HHHHHHHHHHHHHH-------------------------HCCCCEEEE---EcHHHHHHHHhCCCeEeceeccc
Q 010815 421 QGDKLLDYIEKKAA-------------------------SLGLDMLFL---LTTRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 421 iG~~Ll~~l~~~a~-------------------------~~g~~~I~l---~~~~a~~fYek~GF~~~~~~~lp 466 (500)
+|++|++.++++++ ..++..+-. .+....+||.|+||.++....-+
T Consensus 107 ~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~gf~pv~l~~~~ 180 (196)
T PF13718_consen 107 YGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKNGFVPVYLGQTR 180 (196)
T ss_dssp HHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCTT-EEEEE-SS-
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHCCcEEEEEecCc
Confidence 99999999999993 445554333 22578999999999998765444
|
|
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.6e-05 Score=75.35 Aligned_cols=109 Identities=24% Similarity=0.339 Sum_probs=81.6
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEE-CCeEEEEEEEeeecCCCeEEEEEEEEccCCcCC
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 419 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~-dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~ 419 (500)
.++.+...|...+..+-.-+...+. .++..++.+.++.. +++||+|.++.- --|.|++|+|.+||-
T Consensus 5 ~~~~v~~~e~~k~~~i~~fL~~~~l-------~~d~~ve~~v~~~~~~~~iiacGsiaG------nvikcvAvs~s~qGe 71 (352)
T COG3053 5 TFSRVKRSEKKKMAEIAEFLHQNDL-------RVDTTVEYFVAIYRDNEEIIACGSIAG------NVIKCVAVSESLQGE 71 (352)
T ss_pred EEEEEccchhhHHHHHHHHHhhcCc-------eecccceEEEEEEcCCCcEEEeccccc------ceeEEEEechhcccc
Confidence 3555555565555544332333333 23344555555554 499999998862 247799999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 420 GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 420 GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
|+.-+|+.++++.+-++|..++++.| +....||+.+||.+...
T Consensus 72 Gl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i~~ 115 (352)
T COG3053 72 GLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFSEIAS 115 (352)
T ss_pred cHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCceEeec
Confidence 99999999999999999999999999 67899999999998753
|
|
| >PRK09181 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00027 Score=75.92 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=63.5
Q ss_pred HHHHHHHHh----CCCcEEEcCcccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc--C------CCCcccc
Q 010815 132 VTRMRERLD----GGCLVILSNLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL--D------ESGHLIR 196 (500)
Q Consensus 132 ~~~I~~lL~----~g~IPVi~~~~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv--~------~~g~~I~ 196 (500)
.+.|...++ .+.|||+++.+.++.|++..+. +|..|+.||.+|+|+.+.+-|||+.+ | ++.+.|+
T Consensus 182 ~~~i~~~l~~~~~~~~v~Vv~GF~~~~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~I~taDPriV~~~~A~~i~ 261 (475)
T PRK09181 182 DERIKKAFKDIDVTKELPIVTGYAKCKEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYHLSSADPKLVGEDKVVPIG 261 (475)
T ss_pred HHHHHHHHhhhccCCcEEEecCCcCCCCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCccccCCCCcCCCCCCeEcC
Confidence 456776666 4789999987656678877664 79999999999999999999999722 3 3678999
Q ss_pred ccCHHHHHHHHHh
Q 010815 197 FLTLQEADSLIRQ 209 (500)
Q Consensus 197 ~i~~~e~~~~~~~ 209 (500)
+|+.+|+.++..-
T Consensus 262 ~lsy~Ea~ELA~~ 274 (475)
T PRK09181 262 RTNYDVADQLANL 274 (475)
T ss_pred ccCHHHHHHHHHc
Confidence 9999999999644
|
|
| >cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00046 Score=69.37 Aligned_cols=77 Identities=17% Similarity=0.136 Sum_probs=61.9
Q ss_pred HHHHHHHh----CCCcEEEcCcccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc--C------CCCccccc
Q 010815 133 TRMRERLD----GGCLVILSNLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL--D------ESGHLIRF 197 (500)
Q Consensus 133 ~~I~~lL~----~g~IPVi~~~~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv--~------~~g~~I~~ 197 (500)
+.|...++ .+.|||+++.+.+.+|+...+. +|..|+.||.+|+|+.+.+-|||+.. | ++.+.|++
T Consensus 177 ~~i~~~~~~~~~~~~v~IvtGF~~~~~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~i~taDPriV~~~~A~~i~~ 256 (304)
T cd04248 177 ERISEAFRDIDPRDELPIVTGYAKCAEGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFHLSSADPKLVGEDKARPIGR 256 (304)
T ss_pred HHHHHHHHhhccCCcEEEeCCccCCCCCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCceecCCCCccCCCCceEeCc
Confidence 45555554 5789999998666678887775 79999999999999999999999732 3 35678999
Q ss_pred cCHHHHHHHHHh
Q 010815 198 LTLQEADSLIRQ 209 (500)
Q Consensus 198 i~~~e~~~~~~~ 209 (500)
++.+|+.++..-
T Consensus 257 lsY~EA~ELA~~ 268 (304)
T cd04248 257 TNYDVADQLANL 268 (304)
T ss_pred cCHHHHHHHHHc
Confidence 999999998644
|
Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon. |
| >COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.2e-05 Score=64.10 Aligned_cols=127 Identities=19% Similarity=0.174 Sum_probs=86.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeee--------------cCCCe
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF--------------FKEKC 404 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~--------------~~~~~ 404 (500)
.+.++.....|.+++..|-++..-+-. +...+.+..-....++++.+|.+.|++.-... .-++.
T Consensus 7 p~~~~D~~apd~aavLaLNNeha~els--wLe~erL~~l~~eAF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F 84 (167)
T COG3818 7 PILIRDVRAPDLAAVLALNNEHALELS--WLELERLYRLYKEAFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENF 84 (167)
T ss_pred ceehhhhcCCchhhHHhccchhhhhcc--ccCHHHHHHHHHHHHHHhhccchhhheeeccccccCCCCceeehhhhCCce
Confidence 345566666677777777544332211 22233333333333455566665555443211 11356
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEeceeccch
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~~~~lp~ 467 (500)
.++..+.|....||+|+|++|...+.++|+..|+..+.+++ +.+..|.-.+||.+++...+-.
T Consensus 85 ~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~ihg 153 (167)
T COG3818 85 FYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQATIHG 153 (167)
T ss_pred EEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceEEec
Confidence 78999999999999999999999999999999999998888 3578888999999999775553
|
|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00018 Score=62.65 Aligned_cols=106 Identities=16% Similarity=0.246 Sum_probs=66.9
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcC
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG 418 (500)
+..+++.|.-++.+++ ...+.+.+..++ ..+|++.-|++++|-+.+.. ++..+.+..++|++-=|+
T Consensus 7 l~~ls~Qd~iDL~KIw---------p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VRevTRr 75 (128)
T PF12568_consen 7 LTTLSEQDRIDLAKIW---------PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVREVTRR 75 (128)
T ss_dssp -SS--HHHHHHHHHH----------TTS----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-TT-SS
T ss_pred cCCCCHHHHHHHHHhC---------CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEeecccc
Confidence 4456666777777775 122333444443 46899999999999999884 356899999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc--------HHHHHHHHhCCCeEe
Q 010815 419 QGQGDKLLDYIEKKAASLGLDMLFLLT--------TRTADWFKSRGFREC 460 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~~~I~l~~--------~~a~~fYek~GF~~~ 460 (500)
+|+|+.|++.+.+.+.+ ++...+.. .....|...+||...
T Consensus 76 RGVG~yLlee~~rq~p~--i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 76 RGVGLYLLEEVLRQLPD--IKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp SSHHHHHHHHHHHHS-S----EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred ccHHHHHHHHHHHHCCC--CcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 99999999999988843 44444433 235789999999654
|
It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A. |
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00086 Score=66.49 Aligned_cols=92 Identities=18% Similarity=0.184 Sum_probs=64.5
Q ss_pred CCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HH
Q 010815 369 RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TR 447 (500)
Q Consensus 369 ~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~ 447 (500)
.+.+++.+. ..-|++..+++||+-|.-... .++..+| .+.++|+|||||+|+.+-..++..|.++|.....--. ..
T Consensus 156 ~s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~~~-~~~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~ 232 (265)
T PF12746_consen 156 SSYEDFLKN-GFGFCILHDGEIVSGCSSYFV-YENGIEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSWDCHNLA 232 (265)
T ss_dssp SSHHHHHHH---EEEEEETTEEEEEEEEEEE-ETTEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE-EESSHH
T ss_pred CCHHHHHhc-CcEEEEEECCEEEEEEEEEEE-ECCEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCeeCCCHH
Confidence 356666554 445666678888875443322 3467888 8999999999999999999999999999876533222 67
Q ss_pred HHHHHHhCCCeEecee
Q 010815 448 TADWFKSRGFRECSIE 463 (500)
Q Consensus 448 a~~fYek~GF~~~~~~ 463 (500)
+.++-+|+||+.....
T Consensus 233 S~~lA~kLGf~~~~~Y 248 (265)
T PF12746_consen 233 SIALAEKLGFHFDFEY 248 (265)
T ss_dssp HHHHHHHCT--EEEEE
T ss_pred HHHHHHHcCCccccee
Confidence 9999999999987654
|
|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00028 Score=71.01 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=69.6
Q ss_pred CcEEEEEECCeEEEEEEEeee---cCC---CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHH
Q 010815 379 DSFYVVEREGQIIACAALFPF---FKE---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 452 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~---~~~---~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fY 452 (500)
..++++..+.++++.....++ +.+ ....|..+++.|.|||+|.-++|+.+.++...+.|+...+|.. .+.+||
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P-~s~~iY 117 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP-FSGGIY 117 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc-CchhhH
Confidence 578999999999998877653 121 3457899999999999999999999999999999998776655 679999
Q ss_pred HhCCCeEece
Q 010815 453 KSRGFRECSI 462 (500)
Q Consensus 453 ek~GF~~~~~ 462 (500)
+|+||+..+.
T Consensus 118 rKfGye~asn 127 (389)
T COG4552 118 RKFGYEYASN 127 (389)
T ss_pred hhccccccce
Confidence 9999998763
|
|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0012 Score=73.58 Aligned_cols=59 Identities=27% Similarity=0.410 Sum_probs=48.0
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE---EcHHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL---LTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l---~~~~a~~fYek~GF~~~~~~ 463 (500)
.+.|-+|+|+|++|++|||++|++.++++++ .++.-+-. .++...+||.||||.++...
T Consensus 531 G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls 592 (758)
T COG1444 531 GWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLS 592 (758)
T ss_pred eeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEec
Confidence 4568899999999999999999999999997 33443322 22678999999999998765
|
|
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00036 Score=58.57 Aligned_cols=61 Identities=30% Similarity=0.399 Sum_probs=53.7
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCE
Q 010815 379 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~ 440 (500)
+.+|+...+|+.+|.+...+. .++...|.+-+|.+++||||+|+.|+.++++.|++.|.+-
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~~-~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~ki 75 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYDR-GENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKI 75 (99)
T ss_pred ceEEEEecCCcEEEEEEEecC-CCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeE
Confidence 468889999999999998843 4578889999999999999999999999999999988753
|
|
| >PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2 | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00031 Score=65.04 Aligned_cols=132 Identities=20% Similarity=0.285 Sum_probs=81.4
Q ss_pred eeehhhhcCCCcceeeccccc-ccccCCcc-cHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEe
Q 010815 320 LLLELFKRDGMGTMVASDLYE-GTRTAKVT-DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 397 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~~d~~~-~iR~a~~~-D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~ 397 (500)
|..|||++.+.||+|.+...+ .......- |.+.+.+++.+.+......+.....+......+|+ ++..-|.+.+.
T Consensus 2 L~kELFt~sgagTlirrG~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt 78 (170)
T PF04768_consen 2 LQKELFTDSGAGTLIRRGYKILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVT 78 (170)
T ss_dssp HHHHHHSSSTSSEEEE----EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEE
T ss_pred ccchhcCCCCCceEEecCeeeEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEE
Confidence 567999999999999986553 44556665 99999999887773333333333444333333333 23333444443
Q ss_pred e---ecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHH-h-CCCeE
Q 010815 398 P---FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFK-S-RGFRE 459 (500)
Q Consensus 398 ~---~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYe-k-~GF~~ 459 (500)
+ ...+...++..|+|.|..||.|++..++..+.+...+ ++..+ .+..+||- + -|+-.
T Consensus 79 ~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~p~-----L~Wrsr~~n~~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 79 PEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDFPK-----LFWRSREDNPNNKWYFERSDGSFK 143 (170)
T ss_dssp EE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH-SS-----EEEEEETT-TTHHHHHHH-SEEEE
T ss_pred ecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhccc-----eEEEecCCCCcccEEEEeeEEEEE
Confidence 2 3345689999999999999999999999998644322 44444 45677773 3 46655
|
7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A. |
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00061 Score=55.78 Aligned_cols=71 Identities=23% Similarity=0.273 Sum_probs=60.4
Q ss_pred EEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeE
Q 010815 384 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 459 (500)
Q Consensus 384 ~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~ 459 (500)
...+|..|..+.+. ..+++...++.|+|||||+.+.++....+.+.++|+. ++..+ ..++++.+++||..
T Consensus 4 lgpeG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~~ 77 (89)
T PF08444_consen 4 LGPEGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFIF 77 (89)
T ss_pred cCCCCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCee
Confidence 34568888888775 4678999999999999999999999999999999875 56666 46899999999998
Q ss_pred e
Q 010815 460 C 460 (500)
Q Consensus 460 ~ 460 (500)
.
T Consensus 78 ~ 78 (89)
T PF08444_consen 78 M 78 (89)
T ss_pred c
Confidence 5
|
3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ]. |
| >PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0034 Score=58.92 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=79.6
Q ss_pred CcccHHHHHHHHHHHHHcCcC--ccC----CHHHHHhhcCcEEEEEECCeEEEEEEEeeec-------------------
Q 010815 346 KVTDLSGIKQIIQPLVESGAL--VRR----TDEELLKALDSFYVVEREGQIIACAALFPFF------------------- 400 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~~~~~--~~~----s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~------------------- 400 (500)
..+++++++++..+.+.+... .+. ..++++..-..+.+..++|+++||+.+.+..
T Consensus 6 ~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p 85 (182)
T PF00765_consen 6 SRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAP 85 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCC
Confidence 445677888888777766441 111 1222333222355567789999999996421
Q ss_pred -CCCeEEEEEEEEccCCcC------CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 401 -KEKCGEVAAIGVSPECRG------QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG------~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
....+|+.+|+|+|+.++ .-+...|+..+.++|.++|++.+...+ ....++|+++||...-
T Consensus 86 ~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~~~~r~l~r~G~~~~~ 154 (182)
T PF00765_consen 86 RSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDPAMERILRRAGWPVRR 154 (182)
T ss_dssp SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEHHHHHHHHHCT-EEEE
T ss_pred CCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEChHHHHHHHHcCCceEE
Confidence 136799999999998542 247789999999999999999988887 5789999999999763
|
Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A. |
| >PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0035 Score=64.00 Aligned_cols=145 Identities=15% Similarity=0.205 Sum_probs=74.8
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccC-----------CHHHHHhhc-------CcEEEEEE--CCeEEEEEEEeee
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-----------TDEELLKAL-------DSFYVVER--EGQIIACAALFPF 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-----------s~~~~~~~l-------~~~~v~~~--dg~IVG~~~l~~~ 399 (500)
+.||+++..|++++++|-...-..=-..+. +.+.+.... ..++|+++ .|+|+|++.+...
T Consensus 2 ~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~ 81 (342)
T PF04958_consen 2 LVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAA 81 (342)
T ss_dssp EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEESS
T ss_pred eEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEec
Confidence 469999999999999996554321112233 333442222 14677776 4899999988410
Q ss_pred -----------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH---HCCCCEE
Q 010815 400 -----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDML 441 (500)
Q Consensus 400 -----------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~---~~g~~~I 441 (500)
+-.+..+|+.++++|+||+-|.|+.|-+.-.=.+. ++-..+|
T Consensus 82 vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~v 161 (342)
T PF04958_consen 82 VGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADRV 161 (342)
T ss_dssp TTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SEE
T ss_pred cCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchhe
Confidence 11245689999999999999999988776554443 3455677
Q ss_pred EEEc------HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCC
Q 010815 442 FLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 442 ~l~~------~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
...- ...-+||+.+|=...+-.....-... ...+|-|+..++|
T Consensus 162 iAElrG~~De~G~SPFWdalG~~FF~mdF~eAD~Ls----g~~~k~FIaeLMP 210 (342)
T PF04958_consen 162 IAELRGVSDEDGRSPFWDALGRHFFDMDFQEADYLS----GIGNKQFIAELMP 210 (342)
T ss_dssp EEE--B---TT---HHHHHTGGGTS---HHHHHHHH----HH-----------
T ss_pred eeeccCCcCCCCCCchHHHhhccccCCCHHHHHHHH----cCCcchHHHHhCC
Confidence 7766 35689999988665543321111111 2245666666654
|
This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A. |
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.001 Score=53.95 Aligned_cols=44 Identities=32% Similarity=0.524 Sum_probs=40.0
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCC
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 457 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF 457 (500)
++|+|+|||+|+|+.|+..++++++..++. ....+..+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce----ehHHHHHHHHhcCC
Confidence 999999999999999999999999998776 33578999999999
|
|
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00063 Score=60.72 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=47.6
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a-~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
....|+.++|+|+||.+|+|..|+..-++.. .+.=..++.+.+ .+..+||+++||+.++.
T Consensus 100 ~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 100 HNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERFGFKAVGP 161 (190)
T ss_pred cceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhcCceeecc
Confidence 3478999999999999999999887755544 333345666666 57899999999999876
|
|
| >TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.009 Score=58.66 Aligned_cols=120 Identities=15% Similarity=0.097 Sum_probs=81.3
Q ss_pred ccccCC-cccHHHHHHHHHHHHHcCcCcc--------CCHHHHHhhcCcEEEEE-ECCeEEEEEEEeee-----------
Q 010815 341 GTRTAK-VTDLSGIKQIIQPLVESGALVR--------RTDEELLKALDSFYVVE-REGQIIACAALFPF----------- 399 (500)
Q Consensus 341 ~iR~a~-~~D~~~I~~L~~~~~~~~~~~~--------~s~~~~~~~l~~~~v~~-~dg~IVG~~~l~~~----------- 399 (500)
.++.+. .+++++++++..+.+-++..-+ ...++++....++++.+ .+++++||+.+.+.
T Consensus 9 ~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~ 88 (241)
T TIGR03694 9 EIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPF 88 (241)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccH
Confidence 344444 3457888888877665443211 11222222222334443 35899999998642
Q ss_pred ------------------cCCCeEEEEEEEEccCCcCC--------c--------------------HHHHHHHHHHHHH
Q 010815 400 ------------------FKEKCGEVAAIGVSPECRGQ--------G--------------------QGDKLLDYIEKKA 433 (500)
Q Consensus 400 ------------------~~~~~~~I~~l~V~p~yRG~--------G--------------------iG~~Ll~~l~~~a 433 (500)
..+..+|+..++|+|+||++ | +...|+..+.++|
T Consensus 89 e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a 168 (241)
T TIGR03694 89 EKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALS 168 (241)
T ss_pred HHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHH
Confidence 01257899999999999974 2 5577999999999
Q ss_pred HHCCCCEEEEEc-HHHHHHHHhCCCeEe
Q 010815 434 ASLGLDMLFLLT-TRTADWFKSRGFREC 460 (500)
Q Consensus 434 ~~~g~~~I~l~~-~~a~~fYek~GF~~~ 460 (500)
...|++.++..+ ....+++.++|+...
T Consensus 169 ~~~Gi~~~~~v~~~~l~r~l~r~G~~~~ 196 (241)
T TIGR03694 169 SANGITHWYAIMEPRLARLLSRFGIQFR 196 (241)
T ss_pred HHCCCcEEEEEeCHHHHHHHHHhCCceE
Confidence 999999988888 567888999998764
|
Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production. |
| >PRK13834 putative autoinducer synthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.018 Score=55.19 Aligned_cols=114 Identities=13% Similarity=0.151 Sum_probs=77.2
Q ss_pred cccHHHHHHHHHHHHHcCcC--cc----CCHHHHHhhcCcEEEE-EECCeEEEEEEEeee--------------------
Q 010815 347 VTDLSGIKQIIQPLVESGAL--VR----RTDEELLKALDSFYVV-EREGQIIACAALFPF-------------------- 399 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~~~~--~~----~s~~~~~~~l~~~~v~-~~dg~IVG~~~l~~~-------------------- 399 (500)
.+++++++++..+.+-+.+. .+ ...++++..-..+++. ..+|+++||+.+.+.
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~ 94 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLN 94 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCC
Confidence 34567777777766554332 11 1122233222234443 456899999988431
Q ss_pred cCCCeEEEEEEEEccCCcCC---c----HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEe
Q 010815 400 FKEKCGEVAAIGVSPECRGQ---G----QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 460 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p~yRG~---G----iG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~ 460 (500)
..+..+|+..++|+|+++.. + +...|+..+.+++..+|++.++..+ +...+.|.++||...
T Consensus 95 ~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~ 163 (207)
T PRK13834 95 AHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQ 163 (207)
T ss_pred CCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 12357899999999986422 2 5678999999999999999988877 456789999998764
|
|
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.026 Score=49.36 Aligned_cols=98 Identities=18% Similarity=0.076 Sum_probs=69.0
Q ss_pred CcccHHHHHHHHHHHHHcC---cCccCCHHHHHh---hc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEcc
Q 010815 346 KVTDLSGIKQIIQPLVESG---ALVRRTDEELLK---AL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~~~---~~~~~s~~~~~~---~l-----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p 414 (500)
+++|++.+.+++...+... +..+.+.+-+.. .+ -.++++..+|++||+...... +...+......+|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~--~~~~~~~~~g~~~ 104 (142)
T PF13480_consen 27 DPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRH--GGTLYYWYGGYDP 104 (142)
T ss_pred CHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEE--CCEEEEEEEEECH
Confidence 3456777777776544333 212333322222 22 246777889999998877633 3567777889999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc
Q 010815 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 445 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~ 445 (500)
+|+..+.|..|+..++++|.+.|++.+.+..
T Consensus 105 ~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 105 EYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred hhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 9999999999999999999999998877755
|
|
| >PRK10456 arginine succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0061 Score=62.10 Aligned_cols=145 Identities=16% Similarity=0.158 Sum_probs=87.8
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEeee--
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF-- 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----------------~~~~v~~~--dg~IVG~~~l~~~-- 399 (500)
+.+||++..|++++++|-...-..=-..+.+.+.+.+.+ ..++|+++ .|+|+|++.+...
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG 81 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVG 81 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 579999999999999996543211112333333333322 24677775 5899999988410
Q ss_pred ---------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH---HHCCCCEEEE
Q 010815 400 ---------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFL 443 (500)
Q Consensus 400 ---------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a---~~~g~~~I~l 443 (500)
+-.+..+|+.++++|+||+-|.|+.|-+.-.=.+ +++-.++|.+
T Consensus 82 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viA 161 (344)
T PRK10456 82 LNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVA 161 (344)
T ss_pred CCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhhhe
Confidence 0013468999999999999999988776544333 3344455555
Q ss_pred Ec------HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCC
Q 010815 444 LT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 444 ~~------~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
+- ...-+||+.+|=...+-.... ..|-....+|.|+..|+|
T Consensus 162 EmRG~~De~G~SPFWd~lg~hFF~mdF~e----AD~Lsg~~~k~FIaeLMP 208 (344)
T PRK10456 162 EMRGVIDEHGYSPFWQSLGKRFFSMDFSR----ADYLCGTGQKAFIAELMP 208 (344)
T ss_pred eccCccCCCCCCccHHHhhccccCCCHHH----HHHHhcCCCceeHHHHCC
Confidence 54 245778888776655433111 111112346666666664
|
|
| >TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=59.81 Aligned_cols=144 Identities=11% Similarity=0.162 Sum_probs=86.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccC-----------CHHHHHhhc------CcEEEEEE--CCeEEEEEEEeee--
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRR-----------TDEELLKAL------DSFYVVER--EGQIIACAALFPF-- 399 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-----------s~~~~~~~l------~~~~v~~~--dg~IVG~~~l~~~-- 399 (500)
.|||++..|++++++|-...-..=-..+. +.+.+.... ..++|+++ .|+|+|++.+...
T Consensus 1 viRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG 80 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG 80 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 37999999999999995443211112232 333332222 24677775 5899999988410
Q ss_pred ---------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH---HHCCCCEEEE
Q 010815 400 ---------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFL 443 (500)
Q Consensus 400 ---------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a---~~~g~~~I~l 443 (500)
+-.+..+|+.++++|+||+-|.|+.|-+.-.=.+ +++-.++|.+
T Consensus 81 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF~~~viA 160 (336)
T TIGR03245 81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIV 160 (336)
T ss_pred CCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhhee
Confidence 0014568999999999999999988776544333 3444455666
Q ss_pred Ec------HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCC
Q 010815 444 LT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 444 ~~------~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
+- +..-+||+.+|=...+-.... ..|-....+|.|+..|+|
T Consensus 161 EmrG~~De~G~SPFWd~lg~hFF~mdF~e----AD~Lsg~~~k~FIaeLMP 207 (336)
T TIGR03245 161 EIQGVQDDNGDSPFWDAIGRHFFDLDFAT----AEYYSGIKSKTFIAELMP 207 (336)
T ss_pred eccCccCCCCCCccHHHhhccccCCCHHH----HHHHhcCCCceeHHHHCC
Confidence 55 245778888776665433111 111112345666666664
|
In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit. |
| >TIGR03244 arg_catab_AstA arginine N-succinyltransferase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0093 Score=60.70 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=76.7
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEeee---
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF--- 399 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----------------~~~~v~~~--dg~IVG~~~l~~~--- 399 (500)
.+||++..|++++++|-...-..--..+.+.+.+.+.+ ..++|+++ .|+|+|++.+...
T Consensus 1 vvRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 80 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGL 80 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 37999999999999996543211112333333333322 24677775 5899999988410
Q ss_pred --------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH---HHCCCCEEEEE
Q 010815 400 --------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFLL 444 (500)
Q Consensus 400 --------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a---~~~g~~~I~l~ 444 (500)
+-.+..+|+.++++|+||+-|.|+.|-+.-.=.+ +++-.++|.++
T Consensus 81 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAE 160 (336)
T TIGR03244 81 EEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIAE 160 (336)
T ss_pred CCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHHHhhHhhhhhhhhhh
Confidence 0014568999999999999999988766544333 23334445554
Q ss_pred c------HHHHHHHHhCCCeEece
Q 010815 445 T------TRTADWFKSRGFRECSI 462 (500)
Q Consensus 445 ~------~~a~~fYek~GF~~~~~ 462 (500)
- +..-+||+.+|=...+-
T Consensus 161 mrG~~De~G~SPFWd~lg~hFF~m 184 (336)
T TIGR03244 161 MRGVSDEQGRSPFWNALGRHFFSM 184 (336)
T ss_pred hcCccCCCCCCchHHHhhccccCC
Confidence 4 24577888877665543
|
In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST). |
| >TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=59.20 Aligned_cols=144 Identities=15% Similarity=0.158 Sum_probs=86.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccC-----------CHHHHHhhc-----CcEEEEEE--CCeEEEEEEEeee---
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRR-----------TDEELLKAL-----DSFYVVER--EGQIIACAALFPF--- 399 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-----------s~~~~~~~l-----~~~~v~~~--dg~IVG~~~l~~~--- 399 (500)
.+||++..|++++++|-...-..=-..+. +...+.... ..++|+++ .|+|+|++.+...
T Consensus 1 vvRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~ 80 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGL 80 (335)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 37999999999999995443211011222 333332111 24667775 5899999988410
Q ss_pred --------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH---HHCCCCEEEEE
Q 010815 400 --------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA---ASLGLDMLFLL 444 (500)
Q Consensus 400 --------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a---~~~g~~~I~l~ 444 (500)
+-.+..+|+.++++|+||+-|.|+.|-+.-.=.+ +++-..+|..+
T Consensus 81 ~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAE 160 (335)
T TIGR03243 81 DEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIAE 160 (335)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhhhhhheee
Confidence 0014568999999999999999988776544333 34444556665
Q ss_pred c------HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCC
Q 010815 445 T------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 445 ~------~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
- ...-+||+.+|=...+-.... ..|-....+|.|+..|+|
T Consensus 161 mrG~~De~G~SPFWd~lg~hFF~mdF~~----AD~Lsg~~~k~FIaeLMP 206 (335)
T TIGR03243 161 MRGVSDEQGRSPFWEALGRHFFSMDFAQ----ADYLSGIGSKTFIAELMP 206 (335)
T ss_pred ccCccCCCCCCccHHHhhccccCCCHHH----HHHHhcCCCceeHHHHCC
Confidence 5 245778888876665433111 111112356666666664
|
In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). |
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.035 Score=51.86 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=51.2
Q ss_pred EECCeEEEEEEEeeec------CCCeEEEEEEEEccCCcCCcHHHHHHHHHH-HHHHHCCCCEEEEEcHHHHHHHHh-CC
Q 010815 385 EREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIE-KKAASLGLDMLFLLTTRTADWFKS-RG 456 (500)
Q Consensus 385 ~~dg~IVG~~~l~~~~------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~-~~a~~~g~~~I~l~~~~a~~fYek-~G 456 (500)
....++|+.+.+..+. +.....++.++++|+|||+|+++ |+..+. +..+..+-..+...+..+.++|.+ +|
T Consensus 53 KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~k-l~~~~~~~~~~~~~~N~~~~~~~~~~~~w~k~~G 131 (181)
T PF06852_consen 53 KGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMK-LQDDICMDELDSVDDNSVAQGNVKMSNFWHKMFG 131 (181)
T ss_pred cCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHH-HHHHHHHHHhccCCCceeeecCHHHHHHHHHHhC
Confidence 3446788877764322 34678999999999999999996 554444 444333222222233578888877 69
Q ss_pred CeEece
Q 010815 457 FRECSI 462 (500)
Q Consensus 457 F~~~~~ 462 (500)
|...+.
T Consensus 132 ~~~~~h 137 (181)
T PF06852_consen 132 FDDYGH 137 (181)
T ss_pred CCCCcc
Confidence 887765
|
Note that some proteins in the entry contain more than one copy of this region. |
| >COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.015 Score=59.15 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=69.7
Q ss_pred cccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCc-EEEEEECCeEEEEEEEeee--cCCCeEEEEEEEEccCCcC-CcHH
Q 010815 347 VTDLSGIKQIIQPLVESGALVRRTDEELLKALDS-FYVVEREGQIIACAALFPF--FKEKCGEVAAIGVSPECRG-QGQG 422 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~-~~v~~~dg~IVG~~~l~~~--~~~~~~~I~~l~V~p~yRG-~GiG 422 (500)
.-|++.+.+|+.+.+...+ ....+...+.. ...+..-|..-|.+.+.-. ..++..|+..|+|.++.|| -||+
T Consensus 344 ~Ldl~r~q~LI~~SFkRTL----d~h~y~~r~~~~La~~iVsgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gis 419 (495)
T COG5630 344 DLDLPRLQHLIQSSFKRTL----DPHYYETRINTPLARAIVSGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGIS 419 (495)
T ss_pred hcCcHHHHHHHHHHHhhcc----CHHHHHHhccCcceeEEeeccceeeEEEEeeccCCCCCcceeeeeccccccccchHH
Confidence 4578899999877776644 45556665532 2222223344455555433 3347899999999999999 8999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEcHHHHHHH--HhCCCeEecee
Q 010815 423 DKLLDYIEKKAASLGLDMLFLLTTRTADWF--KSRGFRECSIE 463 (500)
Q Consensus 423 ~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fY--ek~GF~~~~~~ 463 (500)
..++.-+.+.--.+=.++-.... ++-+|| +.-|+-.....
T Consensus 420 d~vfniM~e~fP~eL~WRSR~~N-~vNkwYf~rSvg~lk~~~~ 461 (495)
T COG5630 420 DAVFNIMREEFPNELFWRSRHNN-QVNKWYFARSVGYLKQKQD 461 (495)
T ss_pred HHHHHHHHHhCcHhhhhhhcccC-cchheeeehhhehhhccCC
Confidence 99998877665433233333333 566776 33465554333
|
|
| >COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.12 Score=48.96 Aligned_cols=114 Identities=13% Similarity=0.164 Sum_probs=77.6
Q ss_pred cccHHHHHHHHHHHHHcCcC------ccCCHHHHHhhcCcEEEE-EECCeEEEEEEEeee--------------------
Q 010815 347 VTDLSGIKQIIQPLVESGAL------VRRTDEELLKALDSFYVV-EREGQIIACAALFPF-------------------- 399 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~~~~------~~~s~~~~~~~l~~~~v~-~~dg~IVG~~~l~~~-------------------- 399 (500)
+.-+++++++..+.+.+... .....+++++.--.|.++ ..+++|+||+.+.+-
T Consensus 14 ~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P 93 (209)
T COG3916 14 PKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPP 93 (209)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCC
Confidence 34466777777666555432 111222233222234444 678999999998531
Q ss_pred cCCCeEEEEEEEEcc--CCcCC---c-HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEe
Q 010815 400 FKEKCGEVAAIGVSP--ECRGQ---G-QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 460 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p--~yRG~---G-iG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~ 460 (500)
.+.+.+|...|+|++ .-+.. . ++..|+.-+++++..+|+++|...+ ....+.+++.||...
T Consensus 94 ~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~meril~r~Gw~~~ 161 (209)
T COG3916 94 SSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTGMERILRRAGWPLT 161 (209)
T ss_pred CCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEchHHHHHHHHcCCCeE
Confidence 123678999999997 33333 2 4778999999999999999988888 567889999999865
|
|
| >KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.027 Score=50.19 Aligned_cols=122 Identities=18% Similarity=0.131 Sum_probs=76.5
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCc--CccCCHHH----HHhhc---C--cEEEEEE--C-------CeEEEEEEEeeec
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGA--LVRRTDEE----LLKAL---D--SFYVVER--E-------GQIIACAALFPFF 400 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~--~~~~s~~~----~~~~l---~--~~~v~~~--d-------g~IVG~~~l~~~~ 400 (500)
.+-|+++.+.+...+++..-.-..+ ..+.+.++ -..|- + .|+|++- + ...+|=+-++...
T Consensus 15 ILVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt~ 94 (185)
T KOG4135|consen 15 ILVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLTT 94 (185)
T ss_pred EEeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceeeEEec
Confidence 5678888888888888754222111 12222221 11122 1 3555421 1 2356644443221
Q ss_pred --C-------CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 401 --K-------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 401 --~-------~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
+ -..+++.-+...|..||+|+|+..+..++.|+... ++....+.. .+++++|+|++|..+..
T Consensus 95 ~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 95 SPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred CCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 1 13467777889999999999999999999999764 555545544 57899999999998754
|
|
| >COG5628 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.14 Score=44.01 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=58.2
Q ss_pred CcEEEEEECCeEEEEEEEeee---cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHH
Q 010815 379 DSFYVVEREGQIIACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFK 453 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~---~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYe 453 (500)
..-|....++.+||++.+... ..+....++.+.+-..|||+|+|++....+-..++ |...+.... ++|+.||+
T Consensus 37 ~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~w~Va~i~EN~PA~~fwK 114 (143)
T COG5628 37 REAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GVWQVATVRENTPARAFWK 114 (143)
T ss_pred cceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--ceEEEEEeccCChhHHHHH
Confidence 455677789999999988632 22344668889999999999999999988876664 455544433 68999999
Q ss_pred hCCCe
Q 010815 454 SRGFR 458 (500)
Q Consensus 454 k~GF~ 458 (500)
+.-+.
T Consensus 115 ~~~~t 119 (143)
T COG5628 115 RVAET 119 (143)
T ss_pred hhhcc
Confidence 96554
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.059 Score=56.89 Aligned_cols=123 Identities=16% Similarity=0.210 Sum_probs=89.5
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhc--CcEEE--EE-----ECCeEEEEEEEeeecCCCeEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL--DSFYV--VE-----REGQIIACAALFPFFKEKCGE 406 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l--~~~~v--~~-----~dg~IVG~~~l~~~~~~~~~~ 406 (500)
.|.+++++..+.+++.|.+|..+.-+-... .+.+.+++.+.. ..+.+ +. .|.-+||++.+... ++.+.
T Consensus 411 em~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk--~~~w~ 488 (574)
T COG3882 411 EMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKK--ESEWF 488 (574)
T ss_pred eEEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEec--CCeEE
Confidence 355667888899999999997665544443 334566666633 23333 22 25679999888743 46777
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEec
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECS 461 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~ 461 (500)
|..+..+=..=|+++-+.||..+++.|...|+..|...- .+...||+++||+..+
T Consensus 489 IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~ 549 (574)
T COG3882 489 IDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKG 549 (574)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhcccccc
Confidence 877776655669999999999999999999998887765 2568999999999554
|
|
| >COG3375 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.28 Score=46.86 Aligned_cols=120 Identities=13% Similarity=0.073 Sum_probs=78.2
Q ss_pred ccccCC-cccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEE-CCeEEEEEEEee-ecCCC-eEEEEEEEEc
Q 010815 341 GTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFP-FFKEK-CGEVAAIGVS 413 (500)
Q Consensus 341 ~iR~a~-~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~-dg~IVG~~~l~~-~~~~~-~~~I~~l~V~ 413 (500)
.+|.++ +.+++...+++...+..+-........+.... ..+.-+.. |+++||..--++ ..... ..+-+..+|.
T Consensus 4 vvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~ 83 (266)
T COG3375 4 VVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVR 83 (266)
T ss_pred eEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhcc
Confidence 344444 56677777777665554433333334444322 23444444 459999887776 22222 4566789999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEe
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 460 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~ 460 (500)
|++|+.|+|-+|-...-+++.++|+..+...-.+..++-.++.|...
T Consensus 84 e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KL 130 (266)
T COG3375 84 EEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKL 130 (266)
T ss_pred ccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhcchhhh
Confidence 99999999999999999999999999888766544444444444433
|
|
| >COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.085 Score=55.41 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=45.4
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
...||.+|+|+.||+.+++.|++.+.++|.+.. -.+..+|+|+||+..+..
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~gpY 510 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDGPY 510 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccCCc
Confidence 578999999999999999999999888887766 578999999999987755
|
|
| >PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.54 Score=42.86 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=60.9
Q ss_pred CcccHHHHHHHHHHHHH----cCcCccCCHHHHHhhcC------cE-EEEE--ECCeEEEEEEEeee----c--CCCeEE
Q 010815 346 KVTDLSGIKQIIQPLVE----SGALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPF----F--KEKCGE 406 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~----~~~~~~~s~~~~~~~l~------~~-~v~~--~dg~IVG~~~l~~~----~--~~~~~~ 406 (500)
++++++++++|+.+..- ..|....+.+-+...+. .+ +.+. ..+++||++.-.+. . .-...+
T Consensus 33 d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv~~~~~~~~e 112 (162)
T PF01233_consen 33 DDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRVRDKVIKMVE 112 (162)
T ss_dssp SHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEEeeeEeeeee
Confidence 34455666666655321 12234445555555442 22 2232 36899999987542 1 124678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
|..++|++++|.++++--|+..+.+.+...|+.+-.
T Consensus 113 INFLCVhKklRskrlAPvLIkEItRRvn~~gI~qAv 148 (162)
T PF01233_consen 113 INFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQAV 148 (162)
T ss_dssp EEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEE
T ss_pred EEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceeee
Confidence 999999999999999999999999999999987643
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A .... |
| >PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.18 Score=39.60 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=26.1
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHH
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKA 433 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a 433 (500)
.+-|..+.|+|.+|++||+++|++.+.+..
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 456789999999999999999999887653
|
|
| >COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.32 Score=48.07 Aligned_cols=88 Identities=17% Similarity=0.281 Sum_probs=56.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEee---
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP--- 398 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----------------~~~~v~~~--dg~IVG~~~l~~--- 398 (500)
+.+||++..|++++++|-.+.-..--..+.+.+.+...+ ..++|.++ .|+++|++++..
T Consensus 2 lvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vG 81 (336)
T COG3138 2 LVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVG 81 (336)
T ss_pred cccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeec
Confidence 458999999999999996543221112333333333322 24677776 699999988741
Q ss_pred ----ec----------------------------CCCeEEEEEEEEccCCcCCcHHHHHHH
Q 010815 399 ----FF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLLD 427 (500)
Q Consensus 399 ----~~----------------------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~ 427 (500)
++ -....+++.++++|+||.-+.|+.|-+
T Consensus 82 l~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 82 LNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred cCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 10 013446889999999999888876544
|
|
| >cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.73 Score=38.79 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=39.8
Q ss_pred EEEEECCeEEEEEEEeeec-CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHH
Q 010815 382 YVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKK 432 (500)
Q Consensus 382 ~v~~~dg~IVG~~~l~~~~-~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~ 432 (500)
+-+..++...||+.+.+.. .....++..++|.|+.||+|+++.|+..+.+.
T Consensus 11 ~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d 62 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD 62 (99)
T ss_pred eEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhh
Confidence 3444556677888776432 24788999999999999999999999988855
|
DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus | Back alignment and domain information |
|---|
Probab=91.23 E-value=1.5 Score=41.23 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=37.4
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 389 ~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
+++|+-.-... +.....+.|+.|.|.||++|+|+.|++..=..++..+.
T Consensus 66 h~vGyFSKEk~-s~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 66 HIVGYFSKEKE-SWDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp EEEEEEEEESS--TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred eeEEEEEEEec-ccCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 57887765532 23456899999999999999999999999888887653
|
These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A .... |
| >PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch | Back alignment and domain information |
|---|
Probab=90.36 E-value=1.7 Score=37.65 Aligned_cols=47 Identities=17% Similarity=0.221 Sum_probs=33.2
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHh
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 454 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek 454 (500)
|-+++|+++.|++|+|++|++++++.-.-. ...+..+. ....+|.+|
T Consensus 49 vLDFyVhes~QR~G~Gk~LF~~ML~~e~~~-p~~~a~DrPS~Kll~Fl~K 97 (120)
T PF05301_consen 49 VLDFYVHESRQRRGYGKRLFDHMLQEENVS-PHQLAIDRPSPKLLSFLKK 97 (120)
T ss_pred eeeEEEEeceeccCchHHHHHHHHHHcCCC-cccceecCCcHHHHHHHHH
Confidence 458999999999999999999999543221 22333333 456777766
|
Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity |
| >PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=90.08 E-value=2.3 Score=40.04 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=77.9
Q ss_pred ccccCCcccHHHHHHHHHHHHHcC-cCccCCHHHHHhhcC------cEEEEEEC-CeEEEEEEEeeecC-----C-----
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------SFYVVERE-GQIIACAALFPFFK-----E----- 402 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~s~~~~~~~l~------~~~v~~~d-g~IVG~~~l~~~~~-----~----- 402 (500)
-+|+++++|++++.+|+++....- +....+.+++.+|+- ..||.+++ ++|-.+++++..++ +
T Consensus 30 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l 109 (190)
T PF02799_consen 30 GLRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTL 109 (190)
T ss_dssp TEEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEE
T ss_pred ccccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCccce
Confidence 489999999999999999877652 235568899999982 35666665 48888888864321 1
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
..+++ .+++.... =-..|+..++..|++.|+.-..+.. -....|.+++.|.+-+
T Consensus 110 ~aAY~-fY~~~~~~----~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~fL~~lKFg~Gd 164 (190)
T PF02799_consen 110 KAAYS-FYYVATST----RLKELMNDALILAKNEGFDVFNALDLMDNSSFLEDLKFGPGD 164 (190)
T ss_dssp EEEEE-EEEEESSS----HHHHHHHHHHHHHHHTTESEEEEESTTTGGGTTTTTT-EEEE
T ss_pred eeeee-eeeeecCC----CHHHHHHHHHHHHHHcCCCEEehhhhccchhhHhhCCccCCC
Confidence 12333 34444332 2457899999999999988766665 3456889999999765
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A .... |
| >KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.06 E-value=0.7 Score=51.01 Aligned_cols=30 Identities=20% Similarity=0.404 Sum_probs=26.6
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHH
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAA 434 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~ 434 (500)
+.|-+++|+|+|+++|+|++.++.+.++-.
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~e 644 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFE 644 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHh
Confidence 467799999999999999999999988753
|
|
| >PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
Probab=89.91 E-value=5.1 Score=35.37 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=48.0
Q ss_pred EEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 010815 382 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 444 (500)
Q Consensus 382 ~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~ 444 (500)
.....++++||++.+.... +...-+.. +=+|++..+.+|+-.+-..+++|++.|.+.+++-
T Consensus 42 ~~~~~~~kLiav~v~D~l~-~glSaVY~-fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLG 102 (128)
T PF04377_consen 42 LEYRLDGKLIAVAVVDILP-DGLSAVYT-FYDPDYSKRSLGTYSILREIELARELGLPYYYLG 102 (128)
T ss_pred EEEEeCCeEEEEEEeeccc-chhhheee-eeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeC
Confidence 3446889999998887443 33444533 4499999999999999999999999999988873
|
In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation |
| >KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.76 E-value=1.2 Score=45.96 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=52.9
Q ss_pred hCCCcEEEcCc-c-cCCCCCeee---cCHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHHH
Q 010815 140 DGGCLVILSNL-G-YSSSGEVLN---CNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLI 207 (500)
Q Consensus 140 ~~g~IPVi~~~-~-~~~~g~~~~---i~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~~ 207 (500)
....|||+++. + .-+.|-... .-.|..|+.+|++|++|.+=.--||||+ | |.+++++.++.+|+.++.
T Consensus 257 ken~VPVvTGf~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELa 336 (559)
T KOG0456|consen 257 KENAVPVVTGFLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELA 336 (559)
T ss_pred cCCccceEeeccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHH
Confidence 35789999863 3 223343322 3469999999999999999999999987 3 468999999999988874
|
|
| >cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish | Back alignment and domain information |
|---|
Probab=89.54 E-value=1.3 Score=37.23 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=37.0
Q ss_pred EEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH
Q 010815 384 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA 433 (500)
Q Consensus 384 ~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a 433 (500)
+..++..=||+.+.+.......+|..++|.|+.||+|+++.|+..+.+..
T Consensus 14 ~y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~ 63 (99)
T cd04265 14 IYLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF 63 (99)
T ss_pred EEEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC
Confidence 33344455666665332246889999999999999999999999888553
|
This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated | Back alignment and domain information |
|---|
Probab=89.19 E-value=2.8 Score=42.89 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=59.0
Q ss_pred EEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcH----HHHHHHHhC
Q 010815 381 FYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT----RTADWFKSR 455 (500)
Q Consensus 381 ~~v~~-~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~----~a~~fYek~ 455 (500)
++++. .+++++|.+.+.... +..+....+.+++++..+-...|+-+++++|.++|++...+-.. ...+|-+++
T Consensus 197 l~~a~~~~g~~va~~l~~~~~--~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~ 274 (330)
T TIGR03019 197 VLTVRLGDGVVASAVLSFYFR--DEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNW 274 (330)
T ss_pred EEEEEeCCCCEEEEEEEEEeC--CEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcC
Confidence 45556 688888876665332 23332245678999999999999999999999999998877541 345566778
Q ss_pred CCeEecee
Q 010815 456 GFRECSIE 463 (500)
Q Consensus 456 GF~~~~~~ 463 (500)
||++....
T Consensus 275 G~~~~~l~ 282 (330)
T TIGR03019 275 GFEPQPLH 282 (330)
T ss_pred CCeeccce
Confidence 99987643
|
Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members |
| >KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.03 E-value=3.3 Score=42.34 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=80.5
Q ss_pred ccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhcC------cEEEEEE-CCeEEEEEEEeeecCC----------
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFKE---------- 402 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l~------~~~v~~~-dg~IVG~~~l~~~~~~---------- 402 (500)
-+|+++.+|++++.+|+..+... .+....+.+++.+|+- ..||++. +|+|-+++.++.....
T Consensus 262 G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl 341 (421)
T KOG2779|consen 262 GLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKTL 341 (421)
T ss_pred CcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCccee
Confidence 58999999999999999886544 4556678899999872 2455655 7999999998754321
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
..+++ .+.|..+ =--..|+..++-.++..|+.-..+.. -....|+++++|-+-+
T Consensus 342 ~aaYl-yY~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~~fl~~LkFg~Gd 396 (421)
T KOG2779|consen 342 QAAYL-YYNVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENESFLKDLKFGPGD 396 (421)
T ss_pred eeeeE-EEeccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhhhHHHhcCcCcCC
Confidence 12233 3333332 11456888888888888876444433 4568899999998865
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.96 E-value=2.7 Score=48.97 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=84.6
Q ss_pred ccccCC-cccHHHHHHHHHH-HHHcCcCccCCHHHHHh---hc--CcEEEEEECCeEEEEEEEeeec-------------
Q 010815 341 GTRTAK-VTDLSGIKQIIQP-LVESGALVRRTDEELLK---AL--DSFYVVEREGQIIACAALFPFF------------- 400 (500)
Q Consensus 341 ~iR~a~-~~D~~~I~~L~~~-~~~~~~~~~~s~~~~~~---~l--~~~~v~~~dg~IVG~~~l~~~~------------- 400 (500)
.||.++ .+|+..++.|..+ +...++..+-....... .+ ..+|++...+++++...+.+..
T Consensus 30 ~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~~ 109 (989)
T PRK14852 30 AIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYKP 109 (989)
T ss_pred ceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHHH
Confidence 466665 5778889988776 45555553322221111 11 2347776667777777664321
Q ss_pred --------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHh-CCCeEecee
Q 010815 401 --------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKS-RGFRECSIE 463 (500)
Q Consensus 401 --------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek-~GF~~~~~~ 463 (500)
....++++.++++|+.|.+-+=-.|++.+.+++...++..+.+.+ ++-..||++ +||+..+..
T Consensus 110 eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~~ 182 (989)
T PRK14852 110 EVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGEV 182 (989)
T ss_pred HHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCcccccc
Confidence 125789999999998888777778888888888778898888888 567999997 799998743
|
|
| >PTZ00064 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.85 E-value=1.2 Score=47.58 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=60.5
Q ss_pred CCCcceeecccccccccCCcccHHH---HHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEE-EEC---CeEEEEEEEee
Q 010815 328 DGMGTMVASDLYEGTRTAKVTDLSG---IKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFP 398 (500)
Q Consensus 328 ~~~GT~i~~d~~~~iR~a~~~D~~~---I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~d---g~IVG~~~l~~ 398 (500)
...|..|+++..+.|..++=..-.. -.-|+.++|-.+- .+..+++ .|||+ +.| .++||+-.-..
T Consensus 307 hPPG~EIYR~~~iSifEVDG~~~klYCQNLCLLAKLFLDhK-------TLYyDVdpFlFYVLtE~D~~G~HiVGYFSKEK 379 (552)
T PTZ00064 307 HPPGNEIYRKDNISVFEIDGALTRGYAENLCYLAKLFLDHK-------TLQYDVEPFLFYIVTEVDEEGCHIVGYFSKEK 379 (552)
T ss_pred CCCCCeEEEeCCEEEEEEeCccchhHHHHHHHHHHHhccCc-------cccccccceEEEEEEEecCCCcEEEEEecccc
Confidence 3457778776555555544333222 2222233333322 1222332 24554 333 47888765542
Q ss_pred ecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC
Q 010815 399 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 437 (500)
Q Consensus 399 ~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g 437 (500)
. +.....+.||.|.|.||++|+|+.|++..=+..+..|
T Consensus 380 ~-S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 380 V-SLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred c-CcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 2 2234579999999999999999999999888887765
|
|
| >PLN03238 probable histone acetyltransferase MYST; Provisional | Back alignment and domain information |
|---|
Probab=87.52 E-value=1.3 Score=44.20 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=38.1
Q ss_pred CeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC
Q 010815 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 437 (500)
Q Consensus 388 g~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g 437 (500)
.++||+-.-.... .....+.|+.|.|.||++|+|+-|++..=+.++..|
T Consensus 140 ~h~vGYFSKEK~s-~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 140 SHIVGYFSKEKVS-AEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cEEEEEeceeccc-cCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 4688876554222 233568999999999999999999999888887665
|
|
| >PRK01305 arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
Probab=86.85 E-value=11 Score=36.93 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=55.7
Q ss_pred cCCHHHHHhhc-----C-cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 010815 368 RRTDEELLKAL-----D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441 (500)
Q Consensus 368 ~~s~~~~~~~l-----~-~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I 441 (500)
+.+.+++..-+ . ..+....+|++||++.+.... +...-+ -.+=||+|-.+.+|+-.+-..+++|++.|.+.+
T Consensus 127 ~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~-d~lSAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~ 204 (240)
T PRK01305 127 PPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLD-DGLSAV-YTFYDPDEEHRSLGTFAILWQIELAKRLGLPYV 204 (240)
T ss_pred CCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccC-CceeeE-EEeeCCCccccCCHHHHHHHHHHHHHHcCCCeE
Confidence 34555555443 2 233445789999999887443 344455 455699999999999999999999999999988
Q ss_pred EEEc
Q 010815 442 FLLT 445 (500)
Q Consensus 442 ~l~~ 445 (500)
++--
T Consensus 205 YLGY 208 (240)
T PRK01305 205 YLGY 208 (240)
T ss_pred eeeE
Confidence 8844
|
|
| >COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.70 E-value=0.59 Score=48.96 Aligned_cols=57 Identities=19% Similarity=0.241 Sum_probs=45.8
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEE-----c-H---HHHHHHHhCCCeEe
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-----T-T---RTADWFKSRGFREC 460 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~-----~-~---~a~~fYek~GF~~~ 460 (500)
...|..+.|+|+||+-|+|..-+..+.+|..++-+...+-. + . +=.+||++.||+..
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 45789999999999999999999999999988765544332 1 1 22678999999976
|
|
| >KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=86.50 E-value=0.79 Score=46.48 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=41.3
Q ss_pred cCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 414 PECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
..||.||+|..||+.++..|++ .|-..|.+.. -....+|+|+||+..+..
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdGPY 548 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDGPY 548 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecChh
Confidence 3699999999999999999986 4666666655 467999999999987654
|
|
| >PLN03239 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.66 E-value=1.7 Score=44.56 Aligned_cols=101 Identities=15% Similarity=0.038 Sum_probs=58.7
Q ss_pred CCcceeecccccccccCCcccHH---HHHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEE-EE---CCeEEEEEEEeee
Q 010815 329 GMGTMVASDLYEGTRTAKVTDLS---GIKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ER---EGQIIACAALFPF 399 (500)
Q Consensus 329 ~~GT~i~~d~~~~iR~a~~~D~~---~I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~---dg~IVG~~~l~~~ 399 (500)
..|..|+++..+.+..+.=.... +-.-|+.+++-.+- .+...++ .|||+ +. +-+++|+-.-...
T Consensus 137 PPG~eIYR~~~~sifEVDG~~~~~yCQnLCLlaKLFLdhK-------tlyyDV~~FlFYVl~e~D~~g~h~vGYFSKEK~ 209 (351)
T PLN03239 137 PPGNEIYRCGDLAMFEVDGFEERIYCQNLCYIAKLFLDHK-------TLYFDVDPFLFYVLCEVDERGFHPVGYYSKEKY 209 (351)
T ss_pred CCCCeEEEeCCEEEEEEeCccchHHHHHHHHHHHHhhcCc-------ceeccccceEEEEEEEecCCceEEEEEeeeccc
Confidence 45777776655445444432222 22223333333322 1112232 24554 33 2467776655422
Q ss_pred cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC
Q 010815 400 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 437 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g 437 (500)
+.....+.|+.|.|.||++|+|+.|++..=+.++..|
T Consensus 210 -s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 210 -SDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred -CCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 2233479999999999999999999999888887665
|
|
| >PHA01733 hypothetical protein | Back alignment and domain information |
|---|
Probab=83.13 E-value=4.1 Score=36.86 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=63.4
Q ss_pred ccccCCcccHHHHHHHHHHH---HHcCcCc-cC-CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 341 GTRTAKVTDLSGIKQIIQPL---VESGALV-RR-TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~---~~~~~~~-~~-s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
.||++|++|+..+..-.++. +-+.... +. -...+...-..++....+|++++..+..+...++.+.++.+..+.=
T Consensus 4 ~IrpaT~~d~~~l~~n~r~~Dr~E~ealg~~p~~l~~~~~~s~~~v~~~~~nG~l~aI~Gv~~d~~~~vG~pWlV~T~~v 83 (153)
T PHA01733 4 NNRPATQADATEVAQNLRQEDREEIEGLGHSPLALHLSLDVSENVVAFVAPDGSLAGVAGLVEDMGNRVGEIWMVCTPAI 83 (153)
T ss_pred ccccccHHHHHHHHccCCHHHHHHHHHhCCCcccchhhhhccccceEEEecCCcEEEEecccccccCCCCceeEEecHHh
Confidence 48999999987666622221 1111111 11 1111222224446667789999999988643345555544554433
Q ss_pred CcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 416 CRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
.|-+ ...++.+..+..+ ..+..+.-.+ ..+++|.+.+||+....
T Consensus 84 ~k~~---~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~ 132 (153)
T PHA01733 84 EKNP---IALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRY 132 (153)
T ss_pred HhCC---HHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeecc
Confidence 3322 2333333333332 2344333333 57899999999998643
|
|
| >PLN00104 MYST -like histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.78 E-value=1.5 Score=46.62 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=37.6
Q ss_pred CeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC
Q 010815 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 437 (500)
Q Consensus 388 g~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g 437 (500)
.++||+-.-.... .....+.||.|.|.||++|+|+.|++..=+..+..|
T Consensus 291 ~h~vGyFSKEk~s-~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 291 CHMVGYFSKEKHS-EEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred cEEEEEecccccC-cCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 4788876654222 233579999999999999999999998877776654
|
|
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=82.62 E-value=7.4 Score=38.52 Aligned_cols=65 Identities=18% Similarity=0.295 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCCCCC
Q 010815 420 GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 492 (500)
Q Consensus 420 GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~~~~ 492 (500)
+-...|+..+.+.|+++|+.+|++.+ .....+|++.||...+.- | .|. +..+.+||-+.+.....
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~i--~-----~~f-~g~~~~~~~~~~~~~r~ 86 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAKI--P-----GYF-NGHDAYFMSKYLDEDRR 86 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEec--c-----ccc-CCCceEEEEEcCchHhC
Confidence 34778999999999999999999999 456899999999997654 2 222 33577888888776544
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=81.70 E-value=1.7 Score=36.45 Aligned_cols=47 Identities=17% Similarity=0.264 Sum_probs=34.3
Q ss_pred cEEEEEECCeEEEEEEEeee----------------------cCCCeEEEEEEEEccCCcCCcHHHHHH
Q 010815 380 SFYVVEREGQIIACAALFPF----------------------FKEKCGEVAAIGVSPECRGQGQGDKLL 426 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~----------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll 426 (500)
++++.+.+.++||++.+... .....++++.++|+|+||+......||
T Consensus 32 h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 32 HLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred EEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 45555544469999987421 112578999999999999998887776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 500 | ||||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 1e-34 | ||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 1e-34 | ||
| 3e0k_A | 150 | Crystal Structure Of C-Termianl Domain Of N-Acetylg | 1e-25 | ||
| 2bty_A | 282 | Acetylglutamate Kinase From Thermotoga Maritima Com | 2e-10 | ||
| 2buf_A | 300 | Arginine Feed-Back Inhibitable Acetylglutamate Kina | 5e-10 | ||
| 3zzi_A | 464 | Crystal Structure Of A Tetrameric Acetylglutamate K | 7e-09 | ||
| 3zzf_A | 307 | Crystal Structure Of The Amino Acid Kinase Domain F | 7e-09 | ||
| 3s6k_A | 467 | Crystal Structure Of Xcnags Length = 467 | 1e-08 | ||
| 2jj4_A | 321 | The Complex Of Pii And Acetylglutamate Kinase From | 2e-07 | ||
| 2rd5_A | 298 | Structural Basis For The Regulation Of N-Acetylglut | 1e-06 | ||
| 2ap9_A | 299 | Crystal Structure Of Acetylglutamate Kinase From My | 2e-06 | ||
| 2gan_A | 190 | Crystal Structure Of A Putative Acetyltransferase F | 4e-04 |
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of N-Acetylglutamate Synthase From Vibrio Parahaemolyticus Length = 150 | Back alignment and structure |
|
| >pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed With Its Inhibitor Arginine Length = 282 | Back alignment and structure |
|
| >pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase Length = 300 | Back alignment and structure |
|
| >pdb|3ZZI|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase From Saccharomyces Cerevisiae Length = 464 | Back alignment and structure |
|
| >pdb|3ZZF|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From Saccharomyces Cerevisiae Acetylglutamate Kinase Complexed With Its Substrate N-Acetylglutamate Length = 307 | Back alignment and structure |
|
| >pdb|3S6K|A Chain A, Crystal Structure Of Xcnags Length = 467 | Back alignment and structure |
|
| >pdb|2JJ4|A Chain A, The Complex Of Pii And Acetylglutamate Kinase From Synechococcus Elongatus Pcc7942 Length = 321 | Back alignment and structure |
|
| >pdb|2RD5|A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana Length = 298 | Back alignment and structure |
|
| >pdb|2AP9|A Chain A, Crystal Structure Of Acetylglutamate Kinase From Mycobacterium Tuberculosis Cdc1551 Length = 299 | Back alignment and structure |
|
| >pdb|2GAN|A Chain A, Crystal Structure Of A Putative Acetyltransferase From Pyrococcus Horikoshii, Northeast Structural Genomics Target Jr32. Length = 190 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 500 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 2e-81 | |
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 4e-61 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 4e-53 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 6e-24 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 6e-06 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 7e-24 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 3e-05 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 9e-24 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 2e-05 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 1e-23 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 2e-05 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 6e-23 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 3e-05 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 6e-23 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 6e-22 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 3e-04 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 1e-21 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 6e-21 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 1e-20 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 1e-04 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 2e-20 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 3e-20 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 3e-19 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 1e-14 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 1e-13 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 2e-13 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 2e-13 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 4e-13 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 9e-13 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 2e-12 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 2e-12 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 5e-12 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 9e-12 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 4e-11 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 5e-11 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 5e-11 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 5e-11 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 6e-11 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 6e-11 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 8e-11 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 9e-11 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 1e-10 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 2e-10 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 2e-10 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 3e-10 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 6e-10 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 6e-10 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 7e-10 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 8e-10 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 8e-10 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 9e-10 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 1e-09 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 2e-09 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 2e-09 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 3e-09 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 3e-09 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 5e-09 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 6e-09 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 7e-09 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 7e-09 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 7e-09 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 9e-09 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 1e-08 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 2e-08 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 2e-08 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 3e-08 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 3e-08 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 3e-08 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 3e-08 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 3e-08 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 4e-08 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 4e-08 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 4e-08 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 4e-08 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 5e-08 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 5e-08 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 5e-08 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 8e-08 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 8e-08 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 1e-07 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 1e-07 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 1e-07 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 1e-07 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 2e-07 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 2e-07 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 2e-07 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 3e-07 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 3e-07 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 4e-07 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 4e-07 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 8e-07 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 9e-07 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 1e-06 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 1e-06 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 1e-06 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 1e-06 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 1e-06 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 2e-06 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 4e-06 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 5e-06 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 6e-06 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 7e-06 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 8e-06 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 1e-05 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 1e-05 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 1e-05 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 2e-05 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 2e-05 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 3e-05 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 4e-05 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 4e-05 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 6e-05 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 1e-04 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 1e-04 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 1e-04 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 2e-04 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 2e-04 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 5e-04 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 5e-04 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 7e-04 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 7e-04 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 7e-04 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 9e-04 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 2e-81
Identities = 74/193 (38%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 295 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 354
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 355 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 474
+ + G G++LL +I KA +G+ LF L+T T +WF RGF+ S + +PE RRK
Sbjct: 382 QAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYR 441
Query: 475 LS-RNSKYYMKKL 486
+ RNS +++L
Sbjct: 442 SNGRNSHILVRRL 454
|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 4e-61
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
DI L LGIR VL+ G + +D+L + +G Y R+TD SL A + AG +R
Sbjct: 64 AADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVR 123
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
EA L + V + SGNFL A+ GV+DG D G ++K
Sbjct: 124 SRFEAALC--------GSVSGFA--RAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKT 173
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
D +R +LD G +V + LG+S G+ N + + A + A++++A+KL+ + I
Sbjct: 174 DTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISR 233
Query: 190 ESGHLIRFLTLQEADSLIRQ 209
G L L+ QEA SL
Sbjct: 234 PDGTLAETLSAQEAQSLAEH 253
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 4e-53
Identities = 52/148 (35%), Positives = 90/148 (60%)
Query: 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP 398
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P
Sbjct: 3 AEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYP 62
Query: 399 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 458
+ +E+ E+A + + P+ R +G LL+Y++ ++ S ++ +F+LTT + WF+ +GF
Sbjct: 63 YSEERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFY 122
Query: 459 ECSIEMIPEERRKRINLSRNSKYYMKKL 486
E ++ +P ++ N R SK L
Sbjct: 123 EVGVDYLPGAKQGLYNFQRKSKILALDL 150
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
+DI FL +G+R V+V G +I+ L G E ++ R+TD++ ME M
Sbjct: 72 RDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDAD----TMEVV---EM 124
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
++ +++ I + I G + VG G + A+ D G GEV V
Sbjct: 125 VLVGRVNKD--IVSRINTTGGRA----VGFCGTDGRLVLARPH---DQEGIGFVGEVNSV 175
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
+ + L+ G + ++S++ +G+ N N VA A A+ A+KLI + D IL+
Sbjct: 176 NSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILE 235
Query: 190 E---SGHLIRFLTLQEADSLIRQ 209
+ LI L + ++ LI Q
Sbjct: 236 DPKRPESLIPRLNIPQSRELIAQ 258
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 6e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 340
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 277 AQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-24
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
D+ L +G+R +LV G I++ L + A++ R+TD+ ME M
Sbjct: 59 SDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDAT----TMEIV---SM 111
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
++ K++ + + I G ++ VG+S G L A+ + G GEV +V
Sbjct: 112 VLVGKVNKN--LVSLINAAGATA----VGLSGHDGRLLTARPVP--NSAQLGFVGEVARV 163
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
D + +R +D G + +++++ SG+ N N VA A A+ A+KLI + D IL+
Sbjct: 164 DPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILE 223
Query: 190 E---SGHLIRFLTLQEADSLIRQRV 211
LI+ + ++ +I
Sbjct: 224 NKEDPSSLIKEIDIKGVKKMIEDGK 248
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
+GV+ ++DG LL E+ +G GTM+
Sbjct: 265 AQGVKTASIIDGRRQHSLLHEIMSDEGAGTMI 296
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 9e-24
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
D+AFL + GI V+V G QI +L G E + G +R+T E ++ A RM
Sbjct: 48 ADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPE----VLDVA---RM 100
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---DGVDYGATGEV 127
++ ++ + N I HG + VG++ A R+ V D G G+V
Sbjct: 101 VLFGQVGRE--LVNLINAHGPYA----VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDV 154
Query: 128 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP- 186
+V+ M + + G + ++S L + G V N N A A A A+ A+KL+ + D
Sbjct: 155 DQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDG 214
Query: 187 ILD---ESGHLIRFLTLQEADSLI 207
+ + L+ + L+
Sbjct: 215 LYTRWPDRDSLVSEIDTGTLAQLL 238
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 337
GV H++DG + +L+ELF G GT V
Sbjct: 257 IGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 1e-23
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
QDI L + GI+ ++V G I +++ + G E + +R+TD + ME M
Sbjct: 44 QDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEK----TMEIV---EM 96
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
++ K++ I + HG + VG+ + A+++ D G G+VKKV
Sbjct: 97 VLVGKINKE--IVMNLNLHGGRA----VGICGKDSKLIVAEKET--KHGDIGYVGKVKKV 148
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
+ + ++ + +++ +G G N N A A ++ A+KLI + D +L
Sbjct: 149 NPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLK 208
Query: 190 ESGHLIRFLTLQEADSLIRQ 209
+ G LI LT EA+ LIR
Sbjct: 209 D-GKLISTLTPDEAEELIRD 227
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 337
R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 246 RGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 6e-23
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
+D+ + +GI V+V G QI LL E+ ++ R+TD+ M+ M
Sbjct: 49 RDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAA----TMDVV---EM 101
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDY 121
++ +++ I N I RHG S+ +G++ + AK+ V + +D
Sbjct: 102 VLGGQVNKD--IVNLINRHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDI 155
Query: 122 GATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLIC 181
G GEV V+V + + G + +++ +G S+GE N N VA A A++A+KL+
Sbjct: 156 GHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLML 215
Query: 182 IIDGP-ILDESGHLIRFLTLQEADSLIRQ 209
+ + ++D+ G ++ L+ ++ + LI
Sbjct: 216 LTNIAGLMDKQGQVLTGLSTEQVNELIAD 244
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 337
+ GV H++DG + +LLE+F G+GT++++
Sbjct: 263 QGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-23
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIR 70
++FL +G+ +++ G Q+D LS G E + + R+T +LA
Sbjct: 82 SSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNL 141
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
++EA ++++G + ++ G A+ ++ YG GEVK V
Sbjct: 142 KLVEA----------LQQNGARA----TSIT---GGVFEAEY---LNRDTYGLVGEVKAV 181
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
++ + L G + ++++LG + SG++LN N A ++ K+I + +LD
Sbjct: 182 NLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLD 241
Query: 190 ESGHLIRFLTL-QEADSLIRQ 209
G LI + L E D L++Q
Sbjct: 242 AEGKLIDSINLSTEYDHLMQQ 262
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 6e-22
Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 30/230 (13%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
+AFL +G+ V+V G Q+D L + + R+T E++ + +
Sbjct: 79 SALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANL 138
Query: 72 MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 131
+ IR G + V G F A +VD G GE + +
Sbjct: 139 ALVDA---------IRDAGGRA----AAVP--RGVFEA----DIVDADKLGRVGEPRHIH 179
Query: 132 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE 190
+ + G IL+ LG + G ++N N A A++ K++ + +LDE
Sbjct: 180 LDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDE 239
Query: 191 SGHLIRFLTL-QEADSLIRQ---------RVKQSEIAANYVKAVAEEDIT 230
G ++ + L + L++ ++++ + + + + IT
Sbjct: 240 DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSIT 289
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 23/148 (15%), Positives = 39/148 (26%), Gaps = 33/148 (22%)
Query: 302 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 361
+ + T L ELF G GT++ R ++ +
Sbjct: 276 LLDDLPLSSSVSITRPSELARELFTHAGSGTLI-------RRGERMVATDDKSSL----- 323
Query: 362 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI----------- 410
+ G L + Y + F + AAI
Sbjct: 324 DLGRLDNLVKAAFGRPAVEGYWDRLR--------VDRAFVTESYRAAAITTRLDGWVYLD 375
Query: 411 --GVSPECRGQGQGDKLLDYIEKKAASL 436
V + RG+G G + + + A L
Sbjct: 376 KFAVLDDARGEGLGRTVWNRMVDYAPQL 403
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 1e-21
Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 350 LSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGE 406
L +K I P + +V+ + +S +++ + ++I + ++ E
Sbjct: 18 LIDLKNIFSRQLPKMPKEYIVK---LVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAE 74
Query: 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMI 465
VA + V+ + +G G +L++ + ++ L A +FK +GF + M
Sbjct: 75 VAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTK-EHRMP 133
Query: 466 PEERRKRI 473
E+ + I
Sbjct: 134 QEKWKGYI 141
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Length = 279 | Back alignment and structure |
|---|
Score = 91.8 bits (229), Expect = 6e-21
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
I G + V+V G I+KL+ E K + R+T + M
Sbjct: 57 SQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDD----MVLV---SH 109
Query: 72 MIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
+ + + +R+ G S + + +AA D YG G+V +
Sbjct: 110 ALLDLVGKN--LQEKLRQAGVSC----QQLKSDIKHVVAADYL---DKDTYGYVGDVTHI 160
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD 189
+ + E L+ + IL++LGYS G++LN N +ATA A+A+ ADKLI + + +L+
Sbjct: 161 NKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLE 220
Query: 190 ESGHLIRFLTLQEADSLIRQRV 211
G ++ +T + I V
Sbjct: 221 N-GAVLEKITSHQVQEKIDTAV 241
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 22/201 (10%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
+AFL+H+G+ +++ GT Q++ L +G E Y+ RITD ++A + +
Sbjct: 69 SCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNL 128
Query: 72 MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 131
+ + + G + ++ SG F A +D Y G +K V
Sbjct: 129 KLVTA---------LEQLGVRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVT 169
Query: 132 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILD 189
+ + G L IL++L ++SG++LN N A A E K++ + G I
Sbjct: 170 KEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING 229
Query: 190 ESGHLIRFLTL-QEADSLIRQ 209
+G I + L +E D L++Q
Sbjct: 230 STGEKISMINLDEEYDDLMKQ 250
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 15/141 (10%)
Query: 303 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV--ASDLYEGTRTAKVTDLSGIKQIIQPL 360
+ + + L ELF G GTM+ L + + + +++ +Q
Sbjct: 269 DYLPRSSSVAIINVQ-DLQKELFTDSGAGTMIRRGYKLVKRSSIGEFPSADALRKALQRD 327
Query: 361 VES---GALVRRTDEELLKALDSFYVVE--REGQIIACAALFPFFKEKCGEVAAIGVSPE 415
V L + Y E I+ P + S
Sbjct: 328 AGISSGKESVASYLRYLENSDFVSYADEPLEAVAIVKKDTNVPT-------LDKFVCSDA 380
Query: 416 CRGQGQGDKLLDYIEKKAASL 436
D + + + + +L
Sbjct: 381 AWLNNVTDNVFNVLRRDFPAL 401
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Length = 307 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 2e-20
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRM 71
+AFL+H+G+ +++ GT Q++ L +G E Y+ RITD ++A + +
Sbjct: 69 SCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNL 128
Query: 72 MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 131
+ + + + G + ++ SG F A +D Y G +K V
Sbjct: 129 KL---------VTALEQLGVRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVT 169
Query: 132 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILD 189
+ + G L IL++L ++SG++LN N A A E K++ + G I
Sbjct: 170 KEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING 229
Query: 190 ESGHLIRFLTL-QEADSLIRQ 209
+G I + L +E D L++Q
Sbjct: 230 STGEKISMINLDEEYDDLMKQ 250
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Length = 258 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 3e-19
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 12 QDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 69
+ R V+V G +D+L+ K R+T ++ + AG
Sbjct: 25 SALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTA 84
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
+ A ++H ++ VG+ + G+ + + + G G +
Sbjct: 85 NKTLLAW---------AKKHQIAA----VGLFLGDGDSVKVTQLDE----ELGHVGLAQP 127
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 188
+ L+ G L ++S++G + G+++N N + ATA A + A LI + D IL
Sbjct: 128 GSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGIL 186
Query: 189 DESGHLIRFLTLQEADSLIRQRV 211
D G I +T +A+ LI Q +
Sbjct: 187 DGKGQRIAEMTAAKAEQLIEQGI 209
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 1e-14
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 343 RTAKVTDLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY---------VVEREGQII 391
+ + + I + E + R D+ L+ ++ Y + I+
Sbjct: 7 IEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIV 66
Query: 392 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD- 450
L + + V R G KLLD + +D ++L T
Sbjct: 67 GTIGLIRL-DNNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFIS 125
Query: 451 ---WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
++ + GFRE +P L ++++Y + L
Sbjct: 126 AQYFYSNNGFREIKRGDLPSSFP---KLDVDNRFYYRNL 161
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} Length = 181 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 1e-13
Identities = 23/154 (14%), Positives = 62/154 (40%), Gaps = 20/154 (12%)
Query: 349 DLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY--------VVEREGQIIACAALFP 398
L+ + +I +E+ ++ +++ + ++++Y + +++ AL
Sbjct: 31 HLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR 90
Query: 399 FFKEKCGEVAAIGVSPECRGQ--GQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WF 452
+K + P+ RG G KL + A + + L T ++
Sbjct: 91 -IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFY 149
Query: 453 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
+++GF++ + + + + R+S+ Y+K L
Sbjct: 150 ENQGFKQITRDELDVDYI---FPDRDSRIYVKLL 180
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Length = 157 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 19/142 (13%)
Query: 343 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDS--------FYVVEREGQIIA 392
R A + D+S + I + + E D+EL + ++ ++ E QIIA
Sbjct: 5 RKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIA 64
Query: 393 CAAL--------FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 444
AA+ + + G + + P RG G +LD + +A + + L+
Sbjct: 65 TAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLV 124
Query: 445 TTRTADWF-KSRGFRECSIEMI 465
++ K GF++ +
Sbjct: 125 ASKLGRPVYKKYGFQDTDEWLE 146
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 2e-13
Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 382 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441
+ ++G++I F + E+ V+ + +G G L++++++ +
Sbjct: 57 LALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYF 116
Query: 442 FLLTTRTA-DWFKSRGFRECSIEMIPEERRKRI 473
A +FK +GF + I++ I
Sbjct: 117 LTYADEYAIGYFKKQGFSK-DIKVPKSRYLGYI 148
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} Length = 166 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 4e-13
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 30/165 (18%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVR----------RTDEELLKALDS----FYVVEREG 388
R AK DL + ++ L + ++ + + LD YV E +
Sbjct: 6 RRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDD 65
Query: 389 QIIACAALFPFF-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441
II + + + E R +G ++L+ IE++ G+ +
Sbjct: 66 VIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEI 125
Query: 442 FLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 482
F+ +++ +G E + RK +N + ++
Sbjct: 126 FVEVWDFNKGALEFYNKQGLNEHIHYL-----RKPLNRLEHHHHH 165
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 Length = 172 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 9e-13
Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 27/166 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---------------LKALDSFYVVERE 387
R D + I +E ++E+ + + +
Sbjct: 11 RPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQ 70
Query: 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR 447
G + A+L + + + V P+ G+ G L+D +EK A + G +L + +
Sbjct: 71 GVPVGFASL-----KGPDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASD 125
Query: 448 TA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 492
A ++F RG+ + N M K L D++
Sbjct: 126 NAAEFFAKRGYVAKQRNTVSINGEWLAN------TTMTKSLADSAA 165
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* Length = 164 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 23/162 (14%), Positives = 44/162 (27%), Gaps = 38/162 (23%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGAL----------VRRTDEELLKALDS----FYVVEREG 388
R A V D + ++ + E+ A+ V E
Sbjct: 4 REATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDER 63
Query: 389 QIIACAALFPFF---------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
+ I ++ + K ++ + V RG G G + + I + +D
Sbjct: 64 EKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVD 123
Query: 440 MLFLLTTRTADW-------FKSRGFRECSIEMIPEERRKRIN 474
+ L D+ + S G R M +
Sbjct: 124 AIELD---VYDFNDRAKAFYHSLGMRCQKQTM-----ELPLL 157
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 163 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
Y ++ L + + E+ I V + +G G +L+ +KA LG D
Sbjct: 41 CYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADT 99
Query: 441 LFLLTTRTADW----FKSRGFRECSIE 463
+ + T ++ ++ GFR +I+
Sbjct: 100 IEIGTGNSSIHQLSLYQKCGFRIQAID 126
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} Length = 153 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 5e-12
Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 23/144 (15%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------VVEREGQI 390
R + DL + + + + T + + V+E G
Sbjct: 5 RPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAP 64
Query: 391 IACAALFPF---------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441
+A L ++K G + + V P R +G G L++ E + A G+
Sbjct: 65 LAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFA 124
Query: 442 FLLTTRTADWF-KSRGFRECSIEM 464
L T G+ + EM
Sbjct: 125 VLHATEMGQPLYARMGWSPTT-EM 147
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 9e-12
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 39 TYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 97
Query: 441 LFLLTTRTADW----FKSRGFRECSIE 463
L + T ++ ++ GFR SI+
Sbjct: 98 LEVGTGNSSVSQLALYQKCGFRIFSID 124
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Length = 162 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-11
Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 371 DEELLKALDSFYVV--EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDY 428
D L + +G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 40 DLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVYIDPQHRGQQLGEKLLAA 98
Query: 429 IEKKAASLGLDMLFLLTTRTADW-----FKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483
+E KA L L T + G++ S +
Sbjct: 99 LEAKARQRDCHTL-RLETGIHQHAAIALYTRNGYQTR-------CAFAPYQPDPLSVFME 150
Query: 484 KKLLPDTSG 492
K L D
Sbjct: 151 KPLFADLRS 159
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 5e-11
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 24/151 (15%)
Query: 343 RTAKVTDLSGIKQII---------------QPLVESGALVRRTDEELLKALDSFYVVERE 387
RT + + IKQI + L D Y+ E E
Sbjct: 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 73
Query: 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 445
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 74 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHK 133
Query: 446 --TRTADWFKSRGFRECSIEMIPEERRKRIN 474
K G++ ++M K I+
Sbjct: 134 NNLPMISLNKDLGYQVSHVKM-----YKDID 159
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 5e-11
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 366 LVRRTDEELLKALD---------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416
+ + E + AL +F+ ++ C AL GE+ ++ S
Sbjct: 24 MTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTR-HGEIKSMRTSASH 82
Query: 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW------FKSRGFREC 460
+G ++L +I ++A G + L L T A + ++S GF+ C
Sbjct: 83 LRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYC 132
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} Length = 150 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-11
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALDS-----FYVVEREGQIIACAAL 396
R A DL G+ ++ Q L S L + + A+ + +V G+ +A A L
Sbjct: 9 RAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATL 68
Query: 397 FPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 447
+ + RG+G G ++ + + A + LLT
Sbjct: 69 LIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPA 128
Query: 448 TADWFKSRGFRECSIEM 464
+++S GF +
Sbjct: 129 VHAFYESCGFVQNKTGF 145
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Length = 161 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 6e-11
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKALDSFYVV---EREGQIIACAAL 396
R + +DLS +++ L E+ L ++ + V + G+I+ A+L
Sbjct: 24 RVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASL 83
Query: 397 F--PFFKEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 451
P F V + V P RG G G L+ + + + S G + L ++ +
Sbjct: 84 MIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLP 143
Query: 452 F-KSRGFRECSIEM 464
F + GFR +M
Sbjct: 144 FYEKLGFRAHERQM 157
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 190 | Back alignment and structure |
|---|
Score = 60.5 bits (146), Expect = 6e-11
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 321 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 379
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 380 SFYVVEREGQIIACAALF--------------PFFKEKCGEVAAIGVSPECRGQGQGDKL 425
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 426 LDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFRE 459
L++ K+ SLG D +++T + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKDP-YVVTFPNLEAYSYYYMKKGFRE 164
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 8e-11
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYH--LHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 440 MLFLLTTRTA--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
++ L + +++K G+RE + + ++ K+L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREY-------GVVEDHPKGHSQHFFEKRL 140
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* Length = 180 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 9e-11
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 353 IKQIIQPLVES-----GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEV 407
Q+ L + G EE++ + +++ P + E+
Sbjct: 14 KDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWEL 73
Query: 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 467
+ V R G +L++Y+EK+ AS G ++L T + + E +
Sbjct: 74 HPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDD--LDHGTTLSQTDLYEHTFD 131
Query: 468 ERRKRINLSRNSKYYMKKL 486
+ NL + + +KL
Sbjct: 132 KVASIQNLREHPYEFYEKL 150
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 162 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 1e-10
Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 343 RTAKVTDLSGIKQIIQPLVE-----------SGALVRRTDEELLKALDSFYVVEREGQII 391
R A +L I Q + + + +E + Y++ E I
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK-KRLYLLVHEEMIF 62
Query: 392 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 447
+ A ++ + SP +G G L +EK+A G ++ T R
Sbjct: 63 SMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHR 122
Query: 448 TADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGI 493
+F+S+GF + E + L S Y K L + S +
Sbjct: 123 MIRFFESKGFTKI------HESLQMNRLDFGSFYLYVKELENQSIV 162
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Length = 150 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-10
Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 16/139 (11%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKALDS-----FYVVEREGQIIACAAL 396
R +D + Q+ + + G D ++ LK + + ++ +E +II + +
Sbjct: 9 RLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGM 68
Query: 397 FPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-- 450
+ + A + E R +G G +LL E+ + L + L + +
Sbjct: 69 CKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERL 128
Query: 451 ----WFKSRGFRECSIEMI 465
+ G+ +
Sbjct: 129 SAHKLYSDNGYVSNTSGFT 147
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-10
Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 6/123 (4%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFK 401
RT +D + ++ L + + D+ ++ + F
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQS 64
Query: 402 E-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR--TADW--FKSRG 456
+ + + GV P+ R G +L D + G + +T+ G
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLG 124
Query: 457 FRE 459
F
Sbjct: 125 FDI 127
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Length = 190 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 3e-10
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 16/157 (10%)
Query: 324 LFKRDGMGTMVASDLYEGT--RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 380
LF + V + L R +D G +++ L G + + + +
Sbjct: 30 LFSPSLISPDVLAVLPADYTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRA 89
Query: 381 -------FYVVEREGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLDY 428
V + EG+I+ +L F G V I V +G+ G +++
Sbjct: 90 RSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQA 149
Query: 429 IEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 464
++ A +G L + + F GF+ +EM
Sbjct: 150 LDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLEM 186
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 406 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 6e-10
Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 343 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKA---LDSFYVVEREGQII 391
+ + + +++ + ESG +R + + L + E Q+I
Sbjct: 13 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 72
Query: 392 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 445
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 73 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 131
Query: 446 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGII 494
+++ +G+ S ++ + R ++ + +++L D +
Sbjct: 132 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF 180
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Length = 166 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 6e-10
Identities = 21/130 (16%), Positives = 36/130 (27%), Gaps = 13/130 (10%)
Query: 343 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 400
+ A L ++ L + ++ + L + + + Q IA F
Sbjct: 25 KPASEASLKDWLELRNKLWSDSEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRF 84
Query: 401 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTA 449
G + I V P R G L+ E A +
Sbjct: 85 EYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISH 144
Query: 450 DWFKSRGFRE 459
+S GF+E
Sbjct: 145 AMHRSLGFQE 154
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-10
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAAL 396
R D + + Q + L A +V Q+ +
Sbjct: 11 RLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEV 70
Query: 397 FPFFKEKCGEVAA---IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443
P + IGVSP+ + QG G LL YI+ A G+ L L
Sbjct: 71 HPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSL 120
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 8e-10
Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 20/145 (13%)
Query: 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLKAL-----DSFYVVERE 387
E T + IK++ + + S + EEL ++L F+V E
Sbjct: 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNE 69
Query: 388 -GQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442
+++ + K + I V RG G G LL E+ A G +
Sbjct: 70 RSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIV 129
Query: 443 LLT--TRTA-DWFKSRGFRECSIEM 464
L A W++ RG++ ++ M
Sbjct: 130 LRVEIDNPAVKWYEERGYKARALIM 154
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 8e-10
Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 369 RTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 425
E L +AL Y+ ++ L V + V P + QG G L
Sbjct: 29 HQTEMLEQALSHSLVIYLALDGDAVVGLIRLVGDG-FSSVFVQDLIVLPSYQRQGIGSSL 87
Query: 426 LDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRE 459
+ L T F +S GF
Sbjct: 88 MKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEI 122
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* Length = 170 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-10
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 372 EELLKALDSFYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 429
+++L+ + + + C + +K + +G R G G K+L+++
Sbjct: 38 KDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHV 97
Query: 430 EKKAASLG-LDMLFL---LTTRTA-DWFKSRGFRECSIEMIPEERRKR--INLSRNSKYY 482
G D ++L ++ +A D+++ GF E +K + +
Sbjct: 98 LNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEI-------IETKKNYYKRIEPADAHV 150
Query: 483 MKKLLPDTSG 492
++K L SG
Sbjct: 151 LQKNLKVPSG 160
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 152 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 1e-09
Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 11/109 (10%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
+ + + + V + V RGQG KLL E++A G
Sbjct: 53 NITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCM 110
Query: 440 MLFLLTTRTA--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
++ T ++ GF + ++ ++ + K+
Sbjct: 111 GAYIDTMNPDALRTYERYGFTKI-------GSLGPLSSGQSITWLEKRF 152
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* Length = 150 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 2e-09
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 343 RTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALDS------FYVVEREGQIIACAA 395
D ++ + G LV R + F + Q++AC
Sbjct: 7 ERVNDFDGYNWLPLLAKSSQEGFQLVERMLRNRREESFQEDGEAMFVALSTTNQVLACGG 66
Query: 396 LFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 454
+ + G + + V PE R G G LL+ I +A D L L + + +++
Sbjct: 67 YMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQG 125
Query: 455 RGFRECSIEMIP 466
GF+ S E I
Sbjct: 126 LGFQLVSGEKIT 137
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Length = 165 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 2e-09
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)
Query: 343 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 399
R T L + + + L A + +E L + ++ +G I A
Sbjct: 24 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 83
Query: 400 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 448
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 84 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 143
Query: 449 ADWFKSRGFRE 459
++ GF E
Sbjct: 144 QKVHQALGFEE 154
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* Length = 177 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 3e-09
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 362 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK---CGEVAAIGVSPECRG 418
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 45 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 104
Query: 419 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFREC 460
+G G +L+D +E+ A +L L T ++ + +
Sbjct: 105 RGLGRQLMDEVEQVAVKHKRGLLH-LDTEAGSVAEAFYSALAYTRV 149
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A Length = 160 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 24/146 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------------VV 384
R + DL + + ++ L G + + +L+K + V
Sbjct: 11 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 70
Query: 385 EREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 71 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 130
Query: 440 MLFLLTTRTADWF-KSRGFRECSIEM 464
+ L F + GF +EM
Sbjct: 131 KIILDCDEKNVKFYEKCGFSNAGVEM 156
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Length = 149 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 5e-09
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 343 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS--------FYVVEREGQIIAC 393
R +++D G +++ L +G++ + + + S E G+I A
Sbjct: 8 RKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAAT 67
Query: 394 AAL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 448
++ F K G + + V RG+ G K+++++ S+G + L +
Sbjct: 68 GSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVE 127
Query: 449 ADWF-KSRGFRECSIEM 464
F + G SI+M
Sbjct: 128 NKVFYEKCGMSNKSIQM 144
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 6e-09
Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 17/137 (12%)
Query: 343 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKALDSFYVVEREGQIIACA 394
R D ++++++ + LV F + + A
Sbjct: 24 RQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYA 83
Query: 395 ALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF- 452
P E ++ I V+P + G G LL + G +LF T +
Sbjct: 84 CYGPTPATEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLF-AETSGIRKYA 142
Query: 453 ------KSRGFRECSIE 463
+ GF ++
Sbjct: 143 PTRRFYERAGFSAEAVL 159
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} Length = 266 | Back alignment and structure |
|---|
Score = 55.9 bits (134), Expect = 7e-09
Identities = 18/136 (13%), Positives = 35/136 (25%), Gaps = 21/136 (15%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------------DSFYVVERE 387
+D+ IK + G + S YV+
Sbjct: 9 DRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVS 68
Query: 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 445
G+ +A + + + + V PE RG G ++ + + L
Sbjct: 69 GRPVATIHME-KLPDGSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRG-KTERLRSAVYS 126
Query: 446 --TRTADWFKSRGFRE 459
+ GF +
Sbjct: 127 WNEPSLRLVHRLGFHQ 142
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Length = 388 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 7e-09
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 375 LKALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDY 428
+K Y + + A L PF K K G VA + PE R G +LL +
Sbjct: 41 MKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQH 100
Query: 429 IEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 488
+ G + +L +++ G+ C+ ++ + + + + +K+
Sbjct: 101 SLQTMKKDGYT-VSMLHPFAVSFYRKYGWELCANLLVCHMTKSDLVMKKQVNGTVKRFNK 159
Query: 489 D 489
+
Sbjct: 160 E 160
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* Length = 160 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-09
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 343 RTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKALDS---FYVVEREGQIIACA 394
R A+ DL + Q E A+ + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 395 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA----- 449
+ + + + V+P RG G L+ +E A L ++ A
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 450 DWFKSRGFRECSIE 463
+ G++ +I
Sbjct: 126 LLYTQLGYQPRAIA 139
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} Length = 157 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 9e-09
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 343 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDS------FYVVEREGQIIAC 393
R A++ DL I + L E L + +KAL ++V +++A
Sbjct: 10 REARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQ 69
Query: 394 AALFP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 449
+ + ++ V E R +G + L +YI+ + L
Sbjct: 70 IMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKE 129
Query: 450 -----DWFKSRGFRECSIEM 464
++S EC M
Sbjct: 130 NINAKATYESLNMYECDYNM 149
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Length = 254 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 1e-08
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 372 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 431
V Q + + +K E+ GV E + QG G ++ Y+ +
Sbjct: 157 SSYNLDDIERLVAYVNHQPVGIVDII--MTDKTIEIDGFGVLEEFQHQGIGSEIQAYVGR 214
Query: 432 KAASLGLDMLFLLTTRTADWFKSRGFRECSIE 463
A + ++ D + +G+ +
Sbjct: 215 MANERPVILVADGKDTAKDMYLRQGYVYQGFK 246
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 18/135 (13%)
Query: 343 RTAKVTDLSGIKQIIQ------PLVESGALVRRTDEELLKALDS----FYVVEREGQIIA 392
+ ++ + V + + + + L L S + ++
Sbjct: 30 CRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVG 89
Query: 393 CAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 448
A + K + + VS E R QG L++ ++ +A +LG ++++
Sbjct: 90 ALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYG 149
Query: 449 ----ADWFKSRGFRE 459
+ G RE
Sbjct: 150 DDPAVALYTKLGIRE 164
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-08
Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-----------YVVEREGQII 391
R A DL + ++ V R + + +F V +I+
Sbjct: 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 67
Query: 392 ACAALF-----PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 445
+ + + + RGQG G +L+ + ++A G ++ L T
Sbjct: 68 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 127
Query: 446 ---TRTADWFKSRGFRECSIEM 464
+++ GF+ +
Sbjct: 128 KQRPDALRFYEQLGFKASHEGL 149
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} Length = 182 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-08
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 394
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 28 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 87
Query: 395 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW--- 451
+ + + + V+P RG G L+ +E A L ++ +
Sbjct: 88 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCF--NANAA 145
Query: 452 ----FKSRGFRECSIE 463
+ G++ +I
Sbjct: 146 GLLLYTQLGYQPRAIA 161
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Length = 144 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-08
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 5/104 (4%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKALDS-FYVVEREGQIIACAALFPF 399
R + D + + + E + S F V E G+++
Sbjct: 7 RVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGYD 66
Query: 400 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443
G +GV PE RG+G + LL+ +EKK + G + +
Sbjct: 67 GHR--GSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQI 108
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} Length = 172 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 14/131 (10%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAAL 396
R A D + + Q++ +EL L + V+ A L
Sbjct: 26 RRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVL 85
Query: 397 FP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 448
++ + + V P RG G LL S G +L + T
Sbjct: 86 SFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDA 145
Query: 449 ADWFKSRGFRE 459
++++RGF
Sbjct: 146 RRFYEARGFTN 156
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} PDB: 3dr8_A* Length = 174 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 3e-08
Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 391
R A D + I +I V A + L ++ V E G +
Sbjct: 7 RFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVT 66
Query: 392 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML----F 442
A+ + + G E + + V P +G+G G KLL + +A G ++
Sbjct: 67 GYASFGDW-RSFDGFRYTVEHS-VYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIE 124
Query: 443 LLTTRTADWFKSRGFREC 460
+ S GF
Sbjct: 125 SQNAASIRLHHSLGFTVT 142
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Length = 396 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 3e-08
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 377 ALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIE 430
L++F V+ RE ++ A+ P + +AA+G++PE RG G L+ +
Sbjct: 46 GLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTL 105
Query: 431 KKAASLGLDMLFLLTTRTADWFKSRGFRECS 461
++ + + + L ++ G+ +
Sbjct: 106 QEISEQDIPISVLYPATQR-LYRKAGYEQAG 135
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Length = 176 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-08
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 343 RTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKALDS--FYVVEREGQIIACA 394
RTA + D+ + +++ + R + LL D +++ + +
Sbjct: 27 RTAHIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYI 86
Query: 395 ALFPFF-KEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 446
L F E G V P RG+G G L +++ LG+ L + T
Sbjct: 87 VLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDH 146
Query: 447 RTADWFKSRGFRE 459
+ GF E
Sbjct: 147 PARGVYSRAGFEE 159
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 4e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 381 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 63 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 122
Query: 439 DMLFLLT----TRTADWFKSRGFRECSIEM 464
L L ++ GF+E + M
Sbjct: 123 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 152
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} Length = 145 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 4e-08
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 8/103 (7%)
Query: 368 RRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 423
T E L + LD +GQ+I + + V R G G
Sbjct: 34 PPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDG-ILAASIPLLEVQAGWRSLGLGS 92
Query: 424 KLLDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEMI 465
+L+ + + L M+ L F + G + + +
Sbjct: 93 ELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMFL 133
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} Length = 187 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-08
Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 5/120 (4%)
Query: 349 DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVA 408
+ + + +++ +E + K Y+ QII L + +
Sbjct: 46 TVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKKNW-NNYAYIE 104
Query: 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT---ADWF-KSRGFRECSIEM 464
I V + R G G +L+ ++ A + + L T A F + GF +
Sbjct: 105 DITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDF 164
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 5e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 381 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 87 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 146
Query: 439 DMLFLLT----TRTADWFKSRGFRECSIEM 464
L L ++ GF+E + M
Sbjct: 147 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 176
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Length = 228 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-08
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 26/194 (13%)
Query: 268 NGLWSS----EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL-- 321
+W+S + + L RL+ AAAA G+ + D ++
Sbjct: 10 RPVWNSLGGPQSELDVASG-NLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPE 68
Query: 322 -------LELFKRDGMGTMVASDLYEGT-----RTAKVTDLSGIKQIIQPLVESGALVRR 369
+ + + M+A TD+ + + E G
Sbjct: 69 PVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALAL-ATEPGPWASG 127
Query: 370 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 429
T FY V +G++ A A EV+ + PE RG+G +L+ +
Sbjct: 128 TWR-----YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRKV 182
Query: 430 EKKAASLGLDMLFL 443
A+ G ++ +L
Sbjct: 183 IAGMAARG-EVPYL 195
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A Length = 184 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 5e-08
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 14/136 (10%)
Query: 343 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS-----FYVVE--REGQIIACA 394
R DL+ G +++ L E+G + + + + VVE GQI+A A
Sbjct: 42 RPLCTADLNRGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATA 101
Query: 395 AL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 449
L F K G V + VS ECRG+ G LL + + L + L
Sbjct: 102 TLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQN 161
Query: 450 DWF-KSRGFRECSIEM 464
F K G+
Sbjct: 162 VGFYKKFGYTVSEENY 177
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 400 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 8e-08
Identities = 13/117 (11%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 379 DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKK 432
Y + Q+ + PF + + + PE RG+G ++ +
Sbjct: 47 TQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLAD 106
Query: 433 AASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489
A + + + L + +++ G+ + + + + + +K++
Sbjct: 107 LAKQKVALSY-LAPFSYPFYRQYGYEQTFEQAEYTIKTEDWPRVKRVPGTIKRVSWA 162
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} Length = 179 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 8e-08
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 29/147 (19%)
Query: 343 RTAKVTDLSGIKQIIQ----PLVESG------ALVRRTDEELLKALDS--FYVVEREGQI 390
R A TD I ++ L ESG L + + ++ + E E
Sbjct: 17 RFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGA 76
Query: 391 IACAALF-------------PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 437
+A A + +K + I VS G +++ + EK +
Sbjct: 77 LAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMS 136
Query: 438 LDMLFLLT----TRTADWFKSRGFREC 460
+ + L + GF+
Sbjct: 137 VPFIRLDCIESNETLNQMYVRYGFQFS 163
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Length = 160 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-07
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 372 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 431
+ + ++ A A E + I V P+ + +G G LL+++
Sbjct: 33 FGNQGERYLNLKLTADDRMAAFAITQVVLDE--ATLFNIAVDPDFQRRGLGRMLLEHLID 90
Query: 432 KAASLGLDMLFL 443
+ + G+ L+L
Sbjct: 91 ELETRGVVTLWL 102
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} Length = 288 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 1e-07
Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD--SFYVVEREGQIIACAALFP 398
R A D+ + I ++ E+ + + + + + +F
Sbjct: 23 RYATPDDIEDMVSIFIDAYNFPGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFF 82
Query: 399 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 458
+ K + +GV + +G G ++ + + + +++ +K F
Sbjct: 83 Y--NKQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGRRKVDTIRLDASSQGYGLYKKFKFV 140
Query: 459 ECS 461
+
Sbjct: 141 DEY 143
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} Length = 142 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 1e-07
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Query: 368 RRTDEELLKALD-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 426
+ +A+D S A + + V PE RG+G L+
Sbjct: 32 DIPLALVQRAIDHSLCFGGFVDGRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALM 91
Query: 427 DYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 459
D + GL L T+ + GF
Sbjct: 92 DAVMAHPDLQGLRRFSLATSDAHGLYARYGFTP 124
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-07
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 8/115 (6%)
Query: 353 IKQIIQPLVESGALVRRTDEELLKALDS---FYVVEREGQIIACAALFPFFKEKCGEVAA 409
+ + +G + +T E K L + + + ++I + ++
Sbjct: 11 CEDYCALRINAG-MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGDG-GTVFQIVD 68
Query: 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLD--MLFLLTTRTADWF-KSRGFRECS 461
I V +GQ G ++++I K ++ ++ + L+ AD GF
Sbjct: 69 IAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTE 123
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 Length = 170 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 29/168 (17%)
Query: 343 RTAKVTDLSGIKQII-QPLVESGAL----------VRRTDEELLKALDSFYVVEREGQII 391
+ + + + + E L VR ++++ +V +G +I
Sbjct: 11 KPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVI 70
Query: 392 ACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---- 445
+ + +G+ P R +G G +L+ A GL + L
Sbjct: 71 GWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADN 130
Query: 446 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLLPD 489
R ++ GF E R R +S + Y M + +
Sbjct: 131 ARAIALYEKIGFA--------HEGRARDAVSIDGHYIDSLNMAIIFGN 170
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 22/138 (15%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 391
R A V DLSGI +I V + V E + V +G++
Sbjct: 8 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVA 67
Query: 392 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 446
A+ + + G E + + V + RG G G +L+ + A + +L
Sbjct: 68 GYASYGDW-RAFDGYRHTREHS-VYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIE 125
Query: 447 RTAD----WFKSRGFREC 460
+S GFR
Sbjct: 126 AENTASIRLHESLGFRVV 143
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} Length = 181 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 2e-07
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 19/130 (14%)
Query: 343 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDS-----FYVVEREGQIIACA 394
T+ V +++++ P E R E L + D ++ + I
Sbjct: 11 TTSDVQHYKFMEELLVESFPPEE-----YRELEHLREYTDRIGNFHNNIIFDDDLPIGFI 65
Query: 395 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 450
+ F ++ V +P R G G + L+++ + + + R +
Sbjct: 66 TYWDF--DEFYYVEHFATNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRIN 123
Query: 451 WFKSRGFREC 460
+++ GF
Sbjct: 124 FYQRHGFTLW 133
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* Length = 165 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 3e-07
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 324 LFKRDGMGTMVASDLYEG--TRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 380
+F + + S+L + R D S G ++ L G L + E+ +A+ +
Sbjct: 4 IFDASVLAPHIPSNLPDNFKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRT 63
Query: 381 ------FYVVE--REGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLD 427
V+E +++A A+L F G + V E R Q G LL
Sbjct: 64 SVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLK 123
Query: 428 YIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 464
+ SLG+ + L F GF++ M
Sbjct: 124 TLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNFM 161
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 199 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 3e-07
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 52/192 (27%)
Query: 343 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL-------------DSFYVVER 386
R+A D I +++ +E L ++E+++ L V E
Sbjct: 5 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 64
Query: 387 EGQIIACAALFPFFKEKC------------------------------GEVAAIGVSPEC 416
G++ A +P EK + I V
Sbjct: 65 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 124
Query: 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 472
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 125 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLYNH 184
Query: 473 I--NLSRNSKYY 482
+ + S ++
Sbjct: 185 MQKEVEGGSHHH 196
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} Length = 169 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 18/165 (10%), Positives = 51/165 (30%), Gaps = 20/165 (12%)
Query: 343 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDSF----------YVVEREGQII 391
R DL +++ + + L + + + +++
Sbjct: 8 RLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELV 67
Query: 392 ACAALFPFFKEKCGEVAAI-GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL--LTTRT 448
A L A + + + +L+++I + A ++ L + +
Sbjct: 68 ATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNI 127
Query: 449 A--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTS 491
+ +F S GF + E+ +I + ++ ++S
Sbjct: 128 SAKVFFSSIGFENLAF----EKNASKIGNEYFDENWLIYSTTESS 168
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-07
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 372 EELLKALDSFYVVEREGQIIACAALFP------FFKEKCGEVAAIGVSPECRGQGQGDKL 425
+EL F+ + + +I + + E+ I + + G G L
Sbjct: 52 KELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHL 111
Query: 426 LDYIEKKAASLGLDMLFL 443
L+ + A ++L
Sbjct: 112 LNKAIEIALERNKKNIWL 129
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* Length = 183 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 8e-07
Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 23/122 (18%)
Query: 343 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDS----F 381
R + DL + ++ I+ + + E++++ + F
Sbjct: 30 RKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILF 89
Query: 382 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441
+ +I L E+ + + PE + G LL EK G+
Sbjct: 90 LGAFADSTLIGFIELKI--IANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILEC 147
Query: 442 FL 443
L
Sbjct: 148 RL 149
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} Length = 143 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-07
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
A + DL I I ++ + + RR + +V+ + I F +
Sbjct: 6 TKASIDDLDSIVHIDIDVIGNDS--RRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFD 63
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-----WFKSRGF 457
C ++ I VSP R +G LL Y+ + + + +T ++ F + GF
Sbjct: 64 -CTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKI----FSSTNESNESMQKVFNANGF 118
Query: 458 RECSI 462
I
Sbjct: 119 IRSGI 123
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-06
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVVERE-GQII 391
R A+ DL + I + S T E+ ++ YV E E G +
Sbjct: 6 RLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVA 65
Query: 392 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
A + F + EV+ I + CRG+G G LL + A +LG+
Sbjct: 66 AWISFETF-YGRPAYNKTAEVS-IYIDEACRGKGVGSYLLQEALRIAPNLGI 115
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} Length = 172 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 33/171 (19%)
Query: 343 RTAKVTDLSGIKQII-QPLVESGALVR------RTDEELLKALDS--------FYVVERE 387
R A+ D + + + + +E+ T EE+ L+ +
Sbjct: 8 REAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLN 67
Query: 388 GQIIACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLL 444
G+I + +++ + I + G G LL+ + A AS L L L
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLT 127
Query: 445 T----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLL 487
++ GF E ++R K+ M KL+
Sbjct: 128 VQTRNQAAVHLYQKHGFVI-------EGSQERGAYIEEGKFIDVYLMGKLI 171
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 343 RTAKVTDLSGIKQIIQPLV---ESGALVRRTDEELLKALDS------FYVVEREGQIIAC 393
A + L + + + + + L K L + + E +++
Sbjct: 4 VQATLEHLDLLAPLFVKYREFYGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGF 63
Query: 394 AALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 445
L+P F ++ + I V+ E R Q D LL + ++ A + + T
Sbjct: 64 CQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVST 119
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 1e-06
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
S V+ + ++ PF K + E+ +S + +G G L+++++ + +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTS-N 107
Query: 440 MLFLLT---TRTADWFKSRGFRECSIEMIPEERRKRI 473
+ + LT +FK +GF + I + I
Sbjct: 108 IKYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYI 143
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} Length = 160 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-06
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 23/151 (15%)
Query: 343 RTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKALDS----FYVVEREGQIIA 392
R A D I Q+ L + L R T+E+ K + ++ E +G+++
Sbjct: 8 RKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVG 67
Query: 393 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 448
A+L GE + + V R G G L+ + ++A GL + T T
Sbjct: 68 EASLHK-----DGEFS-LVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPM 121
Query: 449 ADWFKSRGFRECSIEMIPEERRKRINLSRNS 479
+ GF+ + +E + L+
Sbjct: 122 IKIGRKLGFK---MRFYEDEVYGEMRLTERE 149
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-06
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 368 RRTDEELLKALDSFYVVEREGQIIACAALFP-----FFKEKCGEVAAIGVSPECRGQGQG 422
KA D F+V + +I+ + G + V + +G+G G
Sbjct: 44 NYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIG 103
Query: 423 DKLLDYIEKKAASLG 437
KLL
Sbjct: 104 RKLLITCLDFLGKYN 118
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A Length = 172 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 4e-06
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVV--EREGQI 390
R A V DL GI I V + D+ +V + G++
Sbjct: 6 RDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEV 65
Query: 391 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML---- 441
+ A+ + + G E + + V + RG+G G +LL + ++A + GL ++
Sbjct: 66 LGYASYGDW-RPFEGFRGTVEHS-VYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAI 123
Query: 442 FLLTTRTADWFKSRGFREC 460
+ + GF
Sbjct: 124 ESGNAASIGLHRRLGFEIS 142
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Length = 197 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 12/102 (11%)
Query: 343 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAA 395
++D+ + ++ + E V + + F V + + +I+
Sbjct: 38 SPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLD 97
Query: 396 LFPFFKEK----CGEVAAIGVSPECRGQGQGDKLLDYIEKKA 433
+ I V+ + R +G G L+ +
Sbjct: 98 YSSLYPFPSGQHIVTFG-IAVAEKERRKGIGRALVQIFLNEV 138
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} Length = 168 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 343 RTAKVTDLSGIKQIIQ-PLVES---GALVRRTDEELLKALDSFYVVEREGQII------- 391
R A++ D+ I +I + L E+ V E L + +F+V + ++
Sbjct: 16 RNARMDDIDQIIKINRLTLPENYPYYFFV----EHLKEYGLAFFVAIVDNSVVGYIMPRI 71
Query: 392 ---ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFL 443
+ G V +I V E R +G LL+ K + + ++L
Sbjct: 72 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYL 127
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 7e-06
Identities = 16/133 (12%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 343 RTAKVTDLSGIKQIIQ-----------PLVESGALVRRTDEELLKALDSFYVVEREGQII 391
D + ++ L +VR + +++ + +
Sbjct: 15 APVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPV 74
Query: 392 ACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 446
+ E + ++ + + + +G+G G + L+ A G+ L+ +
Sbjct: 75 GYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFA--AGLDGVRRLYAVVYGHNP 132
Query: 447 RTADWFKSRGFRE 459
+ +F+++GFR
Sbjct: 133 KAKAFFQAQGFRY 145
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* Length = 181 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 8e-06
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 343 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYVV-EREGQIIACAALFPFF 400
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 401 ------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 454
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 455 RGFR 458
RG+
Sbjct: 129 RGWL 132
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* Length = 339 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 1e-05
Identities = 14/93 (15%), Positives = 25/93 (26%)
Query: 359 PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 418
+ +V +VV G+++ L V + V P R
Sbjct: 39 APPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARVDQLLVHPGRRR 98
Query: 419 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 451
+G G L + + A L +
Sbjct: 99 RGIGRALWAHARELARKHDRTTLTATVVESLPS 131
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} Length = 182 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 19/113 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVERE-GQI 390
+ I +I+ + + R+ E + + E GQ+
Sbjct: 14 ECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQL 73
Query: 391 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
+ A+ F + E + + + + RG G L++ + K+A +
Sbjct: 74 LGFASWGSF-RAFPAYKYTVEHS-VYIHKDYRGLGLSKHLMNELIKRAVESEV 124
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* Length = 174 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 23/124 (18%)
Query: 343 RTAKVTDLSGIKQII--------QPLVESGAL----VRRTDEELLKALDS-------FYV 383
R A + DL G+ +++ + +V L E + L + F
Sbjct: 4 RRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVA 63
Query: 384 VEREGQIIACAALFPFFKEKC----GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
G+++ AA P E+ AI V P + +G G L + + G
Sbjct: 64 ESESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYG 123
Query: 440 MLFL 443
+ +
Sbjct: 124 RMLV 127
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 1e-05
Identities = 54/412 (13%), Positives = 97/412 (23%), Gaps = 154/412 (37%)
Query: 159 LNCNTYEVATACALA-IEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIA 217
+C + L+ E D II + F TL + Q+ + +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDH---IIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLR 88
Query: 218 ANY---VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 274
NY + + E S + + E+R +N+ F N
Sbjct: 89 INYKFLMSPIKTEQRQ------------PSMMTRMYIEQRDRLYNDNQVFAKYN------ 130
Query: 275 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
+ + +L L EL A V + G+
Sbjct: 131 ----VSRLQPYLKLRQALLELRPAKNVL------ID------------------GVL--- 159
Query: 335 ASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS--FYV----VEREG 388
G SG K + V ++ +D F++
Sbjct: 160 ------G---------SG-KTW---VA---LDVCL-SYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 389 QIIA-----CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML-- 441
++ + P + + + + R +L ++ K L +L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRS----DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 442 ---------F------LLTTRTADWF---------------KSRGFRE------------ 459
F LLTTR S
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 460 CSIEMIPEE-------------RRKRINLSR--NSKYYMKKLLPDTSGIIVD 496
C + +P E R L+ N K+ L ++
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 Length = 312 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 1e-05
Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 20/113 (17%)
Query: 372 EELLKALDSFYVVERE-GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 430
+ L++ S + + G++IA F + + V P+ +G G L +
Sbjct: 203 QALVRFNKSLGICRSDTGELIAWIFQNDF-----SGLGMLQVLPKAERRGLGGLLAAAMS 257
Query: 431 KKAASLGLDMLFLLTTRTADW-------FKSRGFRECS----IEMIPEERRKR 472
++ A L K G+++ I+++P +
Sbjct: 258 REIARGEEITLTAWIV---ATNWRSEALLKRIGYQKDLVNEWIKLVPNSSLEH 307
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 9/84 (10%)
Query: 382 YVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLDYIEKKAASLGL 438
VV + + + V R G G ++ +EK AA G
Sbjct: 45 IVVYDGEKPVGAGRWRMK-----DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGA 99
Query: 439 DMLFLLT-TRTADWFKSRGFRECS 461
L T+ ++K G+R S
Sbjct: 100 SGFILNAQTQAVPFYKKHGYRVLS 123
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 25/233 (10%), Positives = 65/233 (27%), Gaps = 40/233 (17%)
Query: 12 QDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
+ L G R ++ G Q+ + LL ++ +++ + G I
Sbjct: 33 AYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCV-----AMTQGSIG 87
Query: 71 MMIEAKLSPGPPICNIRRH------------GDSSRWH---EVGVSVASGNFLAAKRKGV 115
+ L+ I++ D + + +G + A + G
Sbjct: 88 YWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGA 147
Query: 116 V----DGVDY----GATGEVKKVDVTRMRERLDGGCLVILSN------LGYSSSGEVLNC 161
+ G + + + + + + + I +G G
Sbjct: 148 IFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVI 207
Query: 162 NTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIRQ 209
+ + A ++AD L+ + + +T+ E + +
Sbjct: 208 DKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQA 260
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* Length = 207 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 3e-05
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 21/138 (15%)
Query: 343 RTAKVTDLSGIKQIIQ-PLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALF 397
R D +G+ +I + + +E+ L + EG+++A
Sbjct: 38 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 97
Query: 398 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 442
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 98 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 157
Query: 443 LLTTRTA-DWFKSRGFRE 459
L+ +++ GF
Sbjct: 158 LMCEDALVPFYQRFGFHP 175
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A Length = 166 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 21/139 (15%)
Query: 343 RTAKVTDLSGIKQI-----IQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 397
R D +G+ +I I + L + EG+++A
Sbjct: 9 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68
Query: 398 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 442
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 69 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 128
Query: 443 LLTTRTA-DWFKSRGFREC 460
L+ +++ GF
Sbjct: 129 LMCEDALVPFYQRFGFHPA 147
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} Length = 276 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 4e-05
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
+ A L+ + + L + +G+++A F +
Sbjct: 144 QIAGTEQLTAFVTFAAANIGAPEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQY 203
Query: 403 KCGEVAAIG--VSPECRGQGQGDKLLDYIEKKAASLGL 438
+ E A +G V+ RGQG K+L ++ K AA+ GL
Sbjct: 204 Q-TEYADLGMIVAQSNRGQGIAKKVLTFLTKHAATQGL 240
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} Length = 163 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 6e-05
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 343 RTAKVTDLSGIKQII--------QPLVESGAL-----VRRTDEELLKALDS--FYVVERE 387
R A +D I+ + Q L+ S E L + + F V+E+
Sbjct: 9 RKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQA 68
Query: 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443
++I A ++ E+AA + PE +G G +LL+ +F+
Sbjct: 69 DKVIGFANFIEL-EKGKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFV 121
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} Length = 201 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 1e-04
Identities = 17/155 (10%), Positives = 38/155 (24%), Gaps = 28/155 (18%)
Query: 343 RTAKVTDLSGIKQIIQPLVE----------SGALVRRTDEELLKALD--SFYVVEREGQI 390
R A ++ I +I+ +++ + +V +G +
Sbjct: 23 RLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGML 82
Query: 391 IACAALFPFF---------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS 435
AA+ + I +S + RG+G L + +
Sbjct: 83 ATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKG 142
Query: 436 LGL-DMLFLLTTRTADWFKSRGFRECSIEMIPEER 469
G++ C + R
Sbjct: 143 PDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVR 177
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} Length = 147 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 371 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLD 427
D + + + + I L P + V G RG G G +LL
Sbjct: 39 DVKDTDQCEYAVLYLQPDLPITTLRLEP----QADHVMRFGRVCTRKAYRGHGWGRQLLT 94
Query: 428 YIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461
E+ A G + +++ G+R +
Sbjct: 95 AAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTA 129
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} Length = 147 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 1e-04
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 367 VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 426
+ L + V Q + L + A+ + P+ RG G G L+
Sbjct: 39 LEDLVRSFLPEAPLWVAVNERDQPVGFMLL------SGQHMDALFIDPDVRGCGVGRVLV 92
Query: 427 DYIEKKAASLGLDML 441
++ A L ++
Sbjct: 93 EHALSMAPELTTNVN 107
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} Length = 189 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 11/114 (9%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKA---LDSFYVVEREGQIIA--CAAL 396
R + D + I Q++ E L + LL + V E G I +A
Sbjct: 30 RPPRRNDGAAIHQLVS---ECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAY 86
Query: 397 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD 450
+ V + V RG G +L +I ++ + L TT D
Sbjct: 87 LLPTRPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVR--HLETTVGPD 138
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} Length = 188 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 28/156 (17%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLK---ALDSFYVVEREGQIIA 392
R K++DL I +++ E E + A D YV+E +I
Sbjct: 22 RLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYG 81
Query: 393 CAALFPF------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
+ +E + + S +G +L +Y+ + G ++
Sbjct: 82 FIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSK--EYKGAATELFNYVIDVVKARGAEV 139
Query: 441 LFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 472
+ T F GF + +++ +
Sbjct: 140 ILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDK 175
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} Length = 422 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 5e-04
Identities = 15/129 (11%), Positives = 36/129 (27%), Gaps = 11/129 (8%)
Query: 343 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 399
T D + I + + +E + + E + + +
Sbjct: 28 HTITDDDWTRIALLARFAFGDIEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDM 87
Query: 400 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 452
++ + V+P R +G + + + A G L +LT +
Sbjct: 88 QLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTELHDRIARAG-YPLAVLTASEGGIY 146
Query: 453 KSRGFRECS 461
G+ +
Sbjct: 147 GRFGYGVAT 155
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} Length = 428 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 5e-04
Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 7/99 (7%)
Query: 358 QPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF-------FKEKCGEVAAI 410
+ A RT A+ +++ A ++ +
Sbjct: 52 DFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVVLPTAGLSFV 111
Query: 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 449
V+P R +G + + ++ A G + L +
Sbjct: 112 AVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEGG 150
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* Length = 171 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 7e-04
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 343 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL--------------DSFYVVE 385
R A D S I ++I+ L + V T+++LL+ +
Sbjct: 7 RPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTP 66
Query: 386 REGQIIACAALFPFFKEKCGE---VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442
I+ A + + G+ + V + RG G G ++L + + A +
Sbjct: 67 EGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMH 126
Query: 443 LLT----TRTADWFKSRGFR 458
L + +++K RG
Sbjct: 127 FLVAEWNEPSINFYKRRGAS 146
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} Length = 197 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 7e-04
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 28/108 (25%)
Query: 380 SFYVVEREGQIIACA--------------------ALFPFFKEKCGEVA------AIGVS 413
SF V+ + I A +F F +
Sbjct: 57 SFAFVDADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIG 116
Query: 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT--RTADWFKSRGFRE 459
E G+G KLL ++++S G ++ T + + F+ GF
Sbjct: 117 SEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHGFET 164
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* Length = 224 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 7e-04
Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 343 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF 400
R K+ DL + + E+ + + + +++E E +I+
Sbjct: 16 RHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRID 75
Query: 401 KE-------------------KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDM 440
++ A+ + PE + QG GD+LL+++ + A + G++
Sbjct: 76 NPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEK 135
Query: 441 LFL 443
+
Sbjct: 136 VVA 138
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* Length = 170 | Back alignment and structure |
|---|
Score = 39.2 bits (91), Expect = 9e-04
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 343 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSFYVVEREG----- 388
R AK D I ++I+ L E V+ ++E L V E
Sbjct: 7 REAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKL 66
Query: 389 ---QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442
++ + + K + + I V PE RGQG G K++ + + A G
Sbjct: 67 LGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFR 126
Query: 443 LLT----TRTADWFKSRGFR 458
L R D +K+ G +
Sbjct: 127 LAVLDWNQRAMDLYKALGAQ 146
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 500 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 100.0 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 100.0 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 100.0 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 100.0 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 100.0 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 100.0 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 100.0 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 100.0 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 100.0 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 100.0 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 100.0 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 100.0 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 100.0 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 100.0 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 100.0 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 100.0 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 99.98 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 99.98 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 99.97 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 99.97 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 99.97 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 99.96 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.94 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.94 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 99.93 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.93 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.93 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.92 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.91 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.91 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.91 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 99.9 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.9 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.89 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.89 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.89 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.88 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 99.86 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.86 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.75 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 99.69 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 99.68 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 99.66 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 99.66 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 99.65 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 99.65 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 99.65 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 99.64 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 99.64 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 99.63 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 99.63 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 99.63 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 99.62 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 99.62 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 99.62 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 99.62 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 99.62 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 99.61 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 99.61 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 99.6 | |
| 4h89_A | 173 | GCN5-related N-acetyltransferase; N-acyltransferas | 99.6 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 99.6 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 99.6 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 99.6 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 99.6 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 99.6 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 99.59 | |
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 99.59 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 99.59 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 99.59 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 99.58 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 99.58 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 99.58 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 99.58 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 99.58 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 99.58 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 99.58 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 99.58 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 99.58 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 99.58 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 99.57 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 99.57 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 99.57 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 99.56 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 99.56 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 99.56 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 99.56 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 99.55 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 99.55 | |
| 1xeb_A | 150 | Hypothetical protein PA0115; midwest center for st | 99.54 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 99.54 | |
| 4fd4_A | 217 | Arylalkylamine N-acetyltransferase like 5B; GNAT; | 99.54 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 99.54 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 99.54 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 99.54 | |
| 3owc_A | 188 | Probable acetyltransferase; structural genomics, P | 99.53 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 99.53 | |
| 2jdc_A | 146 | Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1. | 99.53 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 99.53 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 99.52 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 99.52 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 99.52 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 99.52 | |
| 3fbu_A | 168 | Acetyltransferase, GNAT family; structur genomics, | 99.52 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 99.52 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 99.51 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 99.51 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 99.51 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 99.51 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 99.51 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 99.51 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 99.51 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 99.51 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 99.51 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 99.51 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 99.5 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 99.5 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 99.5 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 99.49 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 99.49 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 99.49 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 99.49 | |
| 2fl4_A | 149 | Spermine/spermidine acetyltransferase; structural | 99.49 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 99.48 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 99.48 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 99.48 | |
| 3igr_A | 184 | Ribosomal-protein-S5-alanine N-acetyltransferase; | 99.47 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 99.47 | |
| 2bue_A | 202 | AAC(6')-IB; GNAT, transferase, aminoglycoside, flu | 99.47 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 99.47 | |
| 1s7k_A | 182 | Acetyl transferase; GNAT; 1.80A {Salmonella typhim | 99.47 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 99.46 | |
| 2qec_A | 204 | Histone acetyltransferase HPA2 and related acetylt | 99.46 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 99.46 | |
| 2vi7_A | 177 | Acetyltransferase PA1377; GNAT, GCN5 family, N-ace | 99.45 | |
| 3tth_A | 170 | Spermidine N1-acetyltransferase; central intermedi | 99.45 | |
| 3f5b_A | 182 | Aminoglycoside N(6')acetyltransferase; APC60744, l | 99.45 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 99.45 | |
| 3eg7_A | 176 | Spermidine N1-acetyltransferase; structural genomi | 99.44 | |
| 2fsr_A | 195 | Acetyltransferase; alpha-beta-sandwich, structural | 99.44 | |
| 3juw_A | 175 | Probable GNAT-family acetyltransferase; structural | 99.43 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 99.43 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 99.42 | |
| 3r9f_A | 188 | MCCE protein; microcin C7, acetyltransferase, SELF | 99.42 | |
| 4fd5_A | 222 | Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A | 99.42 | |
| 3eo4_A | 164 | Uncharacterized protein MJ1062; APC60792.2,MJ_1062 | 99.42 | |
| 1nsl_A | 184 | Probable acetyltransferase; structural genomics, h | 99.42 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 99.42 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 99.42 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 99.41 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 99.41 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 99.4 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 99.4 | |
| 3te4_A | 215 | GH12636P, dopamine N acetyltransferase, isoform A; | 99.4 | |
| 1yre_A | 197 | Hypothetical protein PA3270; APC5563, midwest cent | 99.39 | |
| 3pzj_A | 209 | Probable acetyltransferases; MCSG, PSI-2, structur | 99.38 | |
| 2fck_A | 181 | Ribosomal-protein-serine acetyltransferase, putat; | 99.37 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 99.36 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 99.36 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 99.36 | |
| 2d4p_A | 141 | Hypothetical protein TTHA1254; structural genomics | 99.35 | |
| 2z10_A | 194 | Ribosomal-protein-alanine acetyltransferase; alpha | 99.34 | |
| 1yk3_A | 210 | Hypothetical protein RV1347C/MT1389; acyltransfera | 99.33 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 99.32 | |
| 2vzy_A | 218 | RV0802C; transferase, GCN5-related N-acetyltransfe | 99.32 | |
| 2g0b_A | 198 | FEEM; N-acyl transferase, environmental DNA, prote | 99.32 | |
| 2k5t_A | 128 | Uncharacterized protein YHHK; N-acetyl transferase | 99.31 | |
| 2qml_A | 198 | BH2621 protein; structural genomics, joint center | 99.31 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 99.29 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 99.29 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.29 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 99.29 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 99.28 | |
| 3tcv_A | 246 | GCN5-related N-acetyltransferase; GRAM negative co | 99.28 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.27 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 99.26 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 99.26 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 99.25 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 99.25 | |
| 4fd7_A | 238 | Putative arylalkylamine N-acetyltransferase 7; GNA | 99.25 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 99.23 | |
| 4ava_A | 333 | Lysine acetyltransferase; allosteric regulation, d | 99.21 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.2 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 99.19 | |
| 2pr1_A | 163 | Uncharacterized N-acetyltransferase YLBP; YIBP pro | 99.16 | |
| 2q04_A | 211 | Acetoin utilization protein; ZP_00540088.1, struct | 99.12 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.1 | |
| 1r57_A | 102 | Conserved hypothetical protein; GCN5, N-acetyltran | 99.08 | |
| 2zw5_A | 301 | Bleomycin acetyltransferase; dimer, two domains; H | 99.08 | |
| 3g3s_A | 249 | GCN5-related N-acetyltransferase; ZP_00874857.1, a | 99.06 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 99.0 | |
| 2ft0_A | 235 | TDP-fucosamine acetyltransferase; GNAT fold acetyl | 98.98 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 98.98 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 98.95 | |
| 1ro5_A | 201 | Autoinducer synthesis protein LASI; alpha-beta-alp | 98.84 | |
| 2zpa_A | 671 | Uncharacterized protein YPFI; RNA modification enz | 98.69 | |
| 3p2h_A | 201 | AHL synthase; acyl-ACP binding, SAM binding, signa | 98.61 | |
| 1xmt_A | 103 | Putative acetyltransferase; structural genomics, p | 98.47 | |
| 1kzf_A | 230 | Acyl-homoserinelactone synthase ESAI; alpha-beta, | 98.35 | |
| 3shp_A | 176 | Putative acetyltransferase STHE_0691; PSI-biology, | 98.34 | |
| 1bob_A | 320 | HAT1, histone acetyltransferase; histone modificat | 98.24 | |
| 1yle_A | 342 | Arginine N-succinyltransferase, alpha chain; struc | 98.15 | |
| 3dns_A | 135 | Ribosomal-protein-alanine acetyltransferase; N-ter | 97.75 | |
| 2p0w_A | 324 | Histone acetyltransferase type B catalytic subuni; | 95.32 | |
| 4hkf_A | 191 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 93.93 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 93.38 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 92.03 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 91.54 | |
| 4b5o_A | 200 | Alpha-tubulin N-acetyltransferase; microtubules, c | 91.41 | |
| 3gkr_A | 336 | FEMX; FEMX, peptidoglycan, hexapeptide, transferas | 91.06 | |
| 4h6u_A | 200 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 90.73 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 90.25 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 89.98 | |
| 4gs4_A | 240 | Alpha-tubulin N-acetyltransferase; acetyl coenzyme | 89.98 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 89.69 | |
| 3to7_A | 276 | Histone acetyltransferase ESA1; MYST family; HET: | 89.31 | |
| 2ozu_A | 284 | Histone acetyltransferase MYST3; structural genomi | 89.13 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 88.88 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 88.76 | |
| 2ou2_A | 280 | Histone acetyltransferase htatip; structural genom | 88.09 | |
| 2pq8_A | 278 | Probable histone acetyltransferase MYST1; MOF, str | 87.39 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 87.09 | |
| 1rxt_A | 496 | Myristoyl-, glycylpeptide N-tetradecanoyltransfera | 84.35 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 84.07 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 83.82 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 82.66 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 81.54 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-61 Score=512.61 Aligned_cols=394 Identities=35% Similarity=0.581 Sum_probs=357.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|+..|+++|||||||++++..++++++++++.+|+|+|++.+|+.+.++++.+|..++++ |
T Consensus 60 ~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~l~~~~~~~G~~~~~l~~~---------l 130 (456)
T 3d2m_A 60 LNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAA---------L 130 (456)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTTCCCCCGGGCCCBCHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCCCCCEeeCCeecCCHHHHHHHHHHHhHHHHHHHHH---------H
Confidence 5689999999999999999999999999999999999999999999999999999966669999999884 5
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+ +|++...+++++++.|++++++++.++++++|+|++|+|+.+|.+.|+.||++|+|||++|++.+.+|+.+|+|+|++
T Consensus 131 ~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~ 209 (456)
T 3d2m_A 131 C-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQA 209 (456)
T ss_dssp H-TC--------CCCEECCSCEEEEECCEETTEECBTBEEEEEECHHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHH
T ss_pred h-cccccCCCccceeeccCcEEEEEEcccccCcccCceeeEEEECHHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHH
Confidence 5 666621134999999999999999887788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccC
Q 010815 167 ATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (500)
|+.+|.+|+||+|+|+|||||++ .++++|++++.+|+++++..+.
T Consensus 210 Aa~lA~~l~Ad~li~lTdvdGv~~~~~~~i~~i~~~e~~~~~~~g~---------------------------------- 255 (456)
T 3d2m_A 210 AASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAA---------------------------------- 255 (456)
T ss_dssp HHHHHHHHTCSEEEEEESSSSCBCTTSCBCSEEEHHHHHHHHTTCC----------------------------------
T ss_pred HHHHHHHcCCCEEEEEECCccccCCCCCccccCCHHHHHHHHhccC----------------------------------
Confidence 99999999999999999999985 5799999999999888753210
Q ss_pred CCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhh
Q 010815 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELF 325 (500)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~ 325 (500)
|| |.+||++|..|+++|++++||+|++.|++++.++|
T Consensus 256 ----------------------------------gg---------m~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~ 292 (456)
T 3d2m_A 256 ----------------------------------SE---------TRRLISSAVAALEGGVHRVQILNGAADGSLLQELF 292 (456)
T ss_dssp ----------------------------------HH---------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHH
T ss_pred ----------------------------------CC---------hHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHH
Confidence 23 99999999999999999999999999999889999
Q ss_pred hcCCCcceeecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeE
Q 010815 326 KRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCG 405 (500)
Q Consensus 326 ~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~ 405 (500)
++++.||.|.++.++.||+++++|++.+.+++.+.....+..+++.+.+..++..+++++.+++++|++.+....+...+
T Consensus 293 ~~~~~GT~i~~~~~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~va~~~g~iVG~~~~~~~~~~~~~ 372 (456)
T 3d2m_A 293 TRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCG 372 (456)
T ss_dssp CSSCSSEEEECCCCCEEEECCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHGGGEEEEEETTEEEEEEEEEECSSTTEE
T ss_pred hhcCCceeeecccceeeCCCCHHHHHHHHHHHHHHHhcCCCccCCHHHHHHHHhhEEEEEECCEEEEEEEEEecCCCCEE
Confidence 98899999999999999999999999999999888777777788999999998889999999999999999876566789
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhccc-CCceEEEE
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMK 484 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~-~~s~~~~k 484 (500)
+|..++|+|+|||+|+|++|++++++++++.|++.+++.++.+.+||+|+||+..+...+|..++..|+++ +++++|++
T Consensus 373 ~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~N~~a~~fY~k~GF~~~~~~~~p~~~~~~y~~~~r~~~v~~k 452 (456)
T 3d2m_A 373 EIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVR 452 (456)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHTTTCEEECGGGSCHHHHHHHHHHCCCCEEEEE
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcHHHHHHHHHCCCEEeCcccCCHHHHhhcccccCCeEEEEE
Confidence 99999999999999999999999999999999999999877899999999999999999999999999998 99999999
Q ss_pred ecC
Q 010815 485 KLL 487 (500)
Q Consensus 485 kll 487 (500)
+++
T Consensus 453 ~L~ 455 (456)
T 3d2m_A 453 RLH 455 (456)
T ss_dssp ECC
T ss_pred EcC
Confidence 885
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=415.28 Aligned_cols=343 Identities=20% Similarity=0.253 Sum_probs=288.0
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
++.++++||+.|+..|.++||||||||+++.+++++|++++|++|+|+|++++|+++.++++.+|..|++ +
T Consensus 73 ~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~lg~vn~~lv~---------a 143 (460)
T 3s6g_A 73 DLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANLALVD---------A 143 (460)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSCCBCTTTHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHHHHHHHHH---------H
Confidence 5789999999999999999999999999999999999999999999999999999997777899999998 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++ +.+++++ +++.|+|++|+|++||++.|+.+|++|+|||++|++.+.+|+.+|+|+|+
T Consensus 144 L~~~G~~----Av~lsg---~~~~a~~---~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~ 213 (460)
T 3s6g_A 144 IRDAGGR----AAAVPR---GVFEADI---VDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADV 213 (460)
T ss_dssp HHHTTCC----EEEECS---SSEEEEE---SCTTTTBSEEEEEEECCHHHHHHHHTTCEEEEECEEECTTCCEEEECHHH
T ss_pred HHhCCCC----ceEEec---CeEEEEE---ecCcccCccCcceEEcHHHHHHHHHCCcEEEEECceECCCCcEEecCHHH
Confidence 7899988 888875 4446664 56789999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHH-HHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
+|++||.+|+||+|+|+|||||++ +++++|++++.. +++.++.++.
T Consensus 214 ~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~~-------------------------------- 261 (460)
T 3s6g_A 214 AVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADW-------------------------------- 261 (460)
T ss_dssp HHHHHHHHHCCSEEEEECSSCSCBCTTSSBCCEEEHHHHHHHHHHCSS--------------------------------
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCCCeecceeCcHHHHHHHHhcCC--------------------------------
Confidence 999999999999999999999985 679999999986 7777764321
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeh
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 323 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~ 323 (500)
.+|| |.+||++|..+++ |++++|+++++.|++|+.+
T Consensus 262 ----------------------------------~tGG---------M~~Kl~aa~~a~~-gv~~v~iv~g~~~~~Ll~e 297 (460)
T 3s6g_A 262 ----------------------------------VNGG---------MRLKLEEIKRLLD-DLPLSSSVSITRPSELARE 297 (460)
T ss_dssp ----------------------------------SCHH---------HHHHHHHHHHHHH-TSCTTCEEEEECGGGHHHH
T ss_pred ----------------------------------CCCc---------HHHHHHHHHHHHh-CCCcEEEEEeCCCcHHHHH
Confidence 1233 9999999888776 7878999999999999999
Q ss_pred hhhcCCCcceeecccccccccCCc---ccHHHHHHHHHHHHHcCcCccCCHHHHH-hhcCcEEEEEECCeEEEEEEEeee
Q 010815 324 LFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVEREGQIIACAALFPF 399 (500)
Q Consensus 324 l~~~~~~GT~i~~d~~~~iR~a~~---~D~~~I~~L~~~~~~~~~~~~~s~~~~~-~~l~~~~v~~~dg~IVG~~~l~~~ 399 (500)
+|++++.||+|.++ +.+|.++. .|++.|.+|+++++. +...+ +.++ ..+..+|+.+.++ +.+...
T Consensus 298 Lft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv~---~~le~~~i~~~~v~e~~~---aaaiv~-- 366 (460)
T 3s6g_A 298 LFTHAGSGTLIRRG--ERMVATDDKSSLDLGRLDNLVKAAFG-RPAVE---GYWDRLRVDRAFVTESYR---AAAITT-- 366 (460)
T ss_dssp HHSSCCSSEEEECC--CCEEEESCGGGSCHHHHHHHHHHHSS-SCBCT---THHHHCCCSEEEEETTSS---EEEEEE--
T ss_pred HhcCCCCceEEEcC--CceEEeccCCcCCHHHHHHHHHHHcC-cccHH---HHHhhcCcceEEEecCCC---EEEEEe--
Confidence 99999999999998 45777777 899999999998776 44432 3444 3567788887776 333232
Q ss_pred cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHH-Hh-CCCeE
Q 010815 400 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF-KS-RGFRE 459 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fY-ek-~GF~~ 459 (500)
+....+++.+|+|+|+|||.|+|..|++++++.. ..++..+ ++..+|| +| -|+..
T Consensus 367 ~~~~~aeL~kfaV~~~~~g~g~gd~l~~~i~~~~-----~~L~Wrsr~~n~~~~Wyf~~s~G~~~ 426 (460)
T 3s6g_A 367 RLDGWVYLDKFAVLDDARGEGLGRTVWNRMVDYA-----PQLIWRSRTNNPVNGFYFEECDGAVR 426 (460)
T ss_dssp EETTEEEEEEEEECHHHHHHTHHHHHHHHHHHHC-----SSEEEEEETTCTTHHHHHHHCSEEEE
T ss_pred cCCCCeEEEEEEEChhhhcCCHHHHHHHHHHHhC-----CceEEEeCCCCCccceEEeeeeEEEE
Confidence 3467999999999999999999999999998653 2355554 3556676 43 36544
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=390.79 Aligned_cols=347 Identities=20% Similarity=0.292 Sum_probs=281.2
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
.+.++++||++|+..|.++|||||||||++.+++++|++++|++|+|+|++++|+++.++++.+|..|++ +
T Consensus 63 ~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~tl~vv~mv~~~vn~~lv~---------~ 133 (464)
T 4ab7_A 63 NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVT---------A 133 (464)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred hHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHHHHH---------H
Confidence 4789999999999999999999999999999999999999999999999999999997777899999988 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ |+++++ +++++++ ++++|+|++|+|++||++.|+.+|++|+|||++|++++.+|+.+|+|+|+
T Consensus 134 L~~~G~~----Avglsg---g~~~a~~---~~~~d~g~vG~I~~v~~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~ 203 (464)
T 4ab7_A 134 LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADV 203 (464)
T ss_dssp HHHTTCC----EEEECS---SSEEEEE---SCTTTTBSBEEEEEECCHHHHHHHHTTCEEEEESEEECTTCBEEECCHHH
T ss_pred HHhCCCC----eEEECC---CcEEEEe---cCccccCCcCcccccCHHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHH
Confidence 7899998 888874 5667776 46789999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC--CCCccccccCHHH-HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 166 VATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~--~~g~~I~~i~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
+|++||.+|+||+|+|+|||||+. +++++|++++..| +++++.++
T Consensus 204 ~Aa~lA~~L~Ad~Li~lTdV~GV~~~~~~~lI~~it~~e~~~~li~~~-------------------------------- 251 (464)
T 4ab7_A 204 AAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQS-------------------------------- 251 (464)
T ss_dssp HHHHHHHHHCCSEEEEEESSCSEECTTTCCEECEEEHHHHHHHHHTCS--------------------------------
T ss_pred HHHHHHHHcCCCEEEEEecccccccCCCCcCCcccCHHHHHHHHHhcC--------------------------------
Confidence 999999999999999999999984 3799999999975 66665321
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHH---cCCCeEEeeccccCce
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR---RGVQRVHLLDGTIGGV 319 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~ 319 (500)
..+|| |.+||++|..+++ +| ..++|++ +++
T Consensus 252 ----------------------------------~~tgG---------M~pKl~aa~aa~~~v~~g-~~v~I~~---~~~ 284 (464)
T 4ab7_A 252 ----------------------------------WVKYG---------TKLKIREIKELLDYLPRS-SSVAIIN---VQD 284 (464)
T ss_dssp ----------------------------------SCCHH---------HHHHHHHHHHHHTTSCTT-CEEEEEE---STT
T ss_pred ----------------------------------CCCCc---------HHHHHHHHHHHHHhcccC-cEEEEec---ChH
Confidence 11233 9999995444433 24 5688887 677
Q ss_pred eeehhhhcCCCcceeecccccccccCCcccHHHHHHHHHHHHHc---CcCccCCHHHHHhhc-CcEEEEEECCeEEEEEE
Q 010815 320 LLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL-DSFYVVEREGQIIACAA 395 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~---~~~~~~s~~~~~~~l-~~~~v~~~dg~IVG~~~ 395 (500)
++.++|++++.||+|.++ +..+|+++.+|+..+.+|......+ .+. ..+.+.+.+.+ ...+.+..++..-|++.
T Consensus 285 ll~eLft~~g~GT~I~~~-~~~~r~a~~~dv~~~~~L~~lL~~s~~~~~~-~~~v~~y~~~L~~~~~~iy~d~~y~~~AI 362 (464)
T 4ab7_A 285 LQKELFTDSGAGTMIRRG-YKLVKRSSIGEFPSADALRKALQRDAGISSG-KESVASYLRYLENSDFVSYADEPLEAVAI 362 (464)
T ss_dssp HHHHTTSSSTTSEEEECC-CCCEEESSGGGSSCHHHHHHHHTTSTTTSSS-SSCHHHHHHHHHTSCEEEEECTTCSEEEE
T ss_pred HHHHHhcCCCCceEEecC-ccccccCChhhhcCHHHHHHHHHhcccccch-hhhHHHHHHHhhcCceEEEEeCCceEEEE
Confidence 899999999999999999 8899999988875555554444433 222 23566665654 23344446666777777
Q ss_pred EeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHH-Hh-CCCeE
Q 010815 396 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF-KS-RGFRE 459 (500)
Q Consensus 396 l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fY-ek-~GF~~ 459 (500)
+. ......++..|+|.|+.|+.|++..+|+.+.+... .++..+ ++..+|| +| -|+-.
T Consensus 363 v~--~~~~~~~LdkFav~~~~~~~gv~d~vf~~i~~d~~-----~L~Wrsr~~n~~~~Wyf~rs~Gs~~ 424 (464)
T 4ab7_A 363 VK--KDTNVPTLDKFVCSDAAWLNNVTDNVFNVLRRDFP-----ALQWVVSENDANIAWHFDKSQGSYL 424 (464)
T ss_dssp EE--CSSSSCEEEEEEECHHHHHTTHHHHHHHHHHHHCS-----SEEEEEETTCTTHHHHHHHCSEEEE
T ss_pred Ee--cCCCCEEEEEEEEcccccccCHHHHHHHHHHhhCC-----ceEEEeCCCCCccceEEeeeeEEEE
Confidence 75 34678999999999999999999999999986642 355544 3556776 43 36554
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=399.76 Aligned_cols=345 Identities=21% Similarity=0.306 Sum_probs=284.0
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
++.++++||+.|+..|.++||||||||+++.+++++|++++|++|+|+|++++|+++.++++.+|..|++ +
T Consensus 76 ~l~~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~~g~vn~~Lv~---------a 146 (467)
T 3s6k_A 76 DLEALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVE---------A 146 (467)
T ss_dssp CCHHHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSCCBCHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHHHHHHHHH---------H
Confidence 4689999999999999999999999999999999999999999999999999999997767899999998 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++ +.++++ ++++.|+|++|+|++||.+.|+.+|++|+|||++|++.+.+|+.+|+|+|+
T Consensus 147 L~~~G~~----Av~lsg---~~~~a~---~~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~ 216 (467)
T 3s6k_A 147 LQQNGAR----ATSITG---GVFEAE---YLNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADF 216 (467)
T ss_dssp HHHHTCC----BCCCCS---SSBCCC---BSCSSSSBSBBCCCCBCCHHHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHH
T ss_pred HHhCCCC----ceEEcC---ccEEEE---eccCcccCccceEEEEcHHHHHHHHHCCCEEEEECceECCCCcEEecCHHH
Confidence 7899998 888775 333443 467789999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHH-HHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 166 VATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
+|++||.+|+||+|+|+|||+|++ +++++|++++.. +++.++.++
T Consensus 217 ~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~--------------------------------- 263 (467)
T 3s6k_A 217 AANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQP--------------------------------- 263 (467)
T ss_dssp HHHHHHHHHCCSSCCCCCSSCSCCCSSCCCCCCCCTTTTTHHHHTSS---------------------------------
T ss_pred HHHHHHHhcCCCEEEEEecccceeCCCCCCccccChHHHHHHHHhcC---------------------------------
Confidence 999999999999999999999985 679999999985 677775321
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeh
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 323 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~ 323 (500)
+.+|| |.+||++|..+++ |++++|+++++.|++++.+
T Consensus 264 ---------------------------------~~tGG---------M~~Kl~aa~~a~~-gv~~~~iv~g~~~~~Ll~e 300 (467)
T 3s6k_A 264 ---------------------------------WINGG---------MRVKIEQIKDLLD-RLPLESSVSITRPADLAKE 300 (467)
T ss_dssp ---------------------------------SCCSH---------HHHHHHHHHHHHT-TSCSSCCBCCCCTTTHHHH
T ss_pred ---------------------------------CCCCc---------hHHHHHHHHHHHh-CCCcEEEEEeCCchHHHHH
Confidence 11233 9999999888775 7878999999999999999
Q ss_pred hhhcCCCcceeecccccccccCCc---ccHHHHHHHHHHHHHcCcCccCCHHHHH-hhcCcEEEEEECCeEEEEEEEeee
Q 010815 324 LFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVEREGQIIACAALFPF 399 (500)
Q Consensus 324 l~~~~~~GT~i~~d~~~~iR~a~~---~D~~~I~~L~~~~~~~~~~~~~s~~~~~-~~l~~~~v~~~dg~IVG~~~l~~~ 399 (500)
+|++++.||+|.+++ .+|.++. .|++.+.+|+++++. ....+ +.++ ..+..+|+.+.++ |++...+.
T Consensus 301 Lft~~g~GT~i~~~e--~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv~---~yle~~~i~~~~v~e~~~---aaaiv~~e 371 (467)
T 3s6k_A 301 LFTHKGSGTLVRRGE--RVLRATSWDELDLPRLTSLIESSFG-RTLVP---DYFSNTKLLRAYVSENYR---AAVILTDE 371 (467)
T ss_dssp HHSSCTTSCCBCCCC--CEEEESSTTSSCHHHHHHHHHHHSS-SCCCT---TCTTTCCCSEEEEETTSS---CEEEEEEE
T ss_pred HhcCCCcceEEeCCC--ceEEccccCcCCHHHHHHHHHHhhc-cchHH---HHHhccCceEEEEecCCc---EEEEEecc
Confidence 999999999999884 4777666 899999999998776 33322 2222 2356777776666 44444432
Q ss_pred ---cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHH-Hh-CCCeE
Q 010815 400 ---FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF-KS-RGFRE 459 (500)
Q Consensus 400 ---~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fY-ek-~GF~~ 459 (500)
..+..+++.+|+|+|+||+.|+|..||+++.+. ...+++.+ ++..+|| +| -|+..
T Consensus 372 ~~~~~~~~~~L~kfaV~~~~~g~g~~d~l~~~i~~~-----~p~L~Wrsr~~n~~~~Wyf~rs~G~~~ 434 (467)
T 3s6k_A 372 GMLGASALIYLDKFAVLDDAQGEGLGRAVWNVMREE-----TPQLFWRSRHNNQVNIFYYAESDGCIK 434 (467)
T ss_dssp CSSTTCSEEEEEEECCCHHHHTTTSHHHHHHHHTTT-----CCSEEEEECSSCTTHHHHHHHCSEEEE
T ss_pred ccCCCCCCeEEEEEEEchhhhcCCHHHHHHHHHHHh-----CCceEEEeCCCCCccceEEeeeeEEEE
Confidence 125789999999999999999999999988743 33466655 3556676 44 46544
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=334.40 Aligned_cols=219 Identities=26% Similarity=0.335 Sum_probs=202.9
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
++.++++||+.|+..|.++||||||||+++..++++++++++++|+|+|++++++++ +.+++.+|..+++
T Consensus 51 ~~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~ln~~i~~--------- 121 (279)
T 3l86_A 51 LSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNLQE--------- 121 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTTHHHHHH---------
T ss_pred HHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHHHHHHHHH---------
Confidence 468999999999999999999999999999999999999999999999999999999 6689999999998
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
.|+++|++ ++++++.|++++++++. ++.||+++|+|+++|.+.|+.||++|+|||++|++++++|+.+|+|+|
T Consensus 122 ~L~~~G~~----a~~l~g~dg~llta~~~---~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~v~~~~~G~~~~i~~D 194 (279)
T 3l86_A 122 KLRQAGVS----CQQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINAD 194 (279)
T ss_dssp HHHHTTCC----EEECSGGGGGTEEEEES---CHHHHBSBEEEEEECHHHHHHHHHTTCEEEEESEEECTTSCEEECCHH
T ss_pred HHHhCCCC----EEEEecCcCCEEEeecc---CccccCcccccchhhHHHHHHHHhCCcEEEECCcEECCCCCEeecCHH
Confidence 57888988 89999999999999875 667999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccccc
Q 010815 165 EVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 244 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (500)
++|+.+|.+|+||+|+|+|||||++.++++|++++.+|+++++..+.
T Consensus 195 ~~Aa~lA~~L~Ad~LiilTDVdGV~~d~~~I~~i~~~e~~~l~~~~~--------------------------------- 241 (279)
T 3l86_A 195 YLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTAV--------------------------------- 241 (279)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSSCEETTEECCEEEGGGSHHHHHTTS---------------------------------
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccccCCEehhhccHHHHHHHHhCCC---------------------------------
Confidence 99999999999999999999999988999999999999988874321
Q ss_pred CCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 245 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
.+|| |.+||++|..|+++|++++||+|+.
T Consensus 242 ---------------------------------~tGG---------M~~Kl~aa~~a~~~Gv~~v~I~~~~ 270 (279)
T 3l86_A 242 ---------------------------------ITAG---------MIPKIESAAKTVAAGVGQVLIGDNL 270 (279)
T ss_dssp ---------------------------------SCTT---------HHHHHHHHHHHHHTTCSEEEEESSS
T ss_pred ---------------------------------CcCc---------HHHHHHHHHHHHHcCCCEEEEeccC
Confidence 1233 9999999999999999999999874
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=327.99 Aligned_cols=244 Identities=28% Similarity=0.460 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++||||||||+++..++++++++++.+|+|+|++.+|+++ ++++|.+|+.+++ +
T Consensus 44 ~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~G~~~~~l~~---------~ 114 (300)
T 2buf_A 44 KAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVN---------L 114 (300)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 67899999999999999999999999999999999999999999999999999999 6777999999999 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCcc--C-------CcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCC
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV--D-------GVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSG 156 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~--~-------~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g 156 (500)
|+.+|++ ++++++.|++|+.+++.+.. + ++|++++|+|+.+|.+.|+.||++|+|||++|++.++.|
T Consensus 115 l~~~g~~----a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G 190 (300)
T 2buf_A 115 INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNG 190 (300)
T ss_dssp HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTS
T ss_pred HHhCCCC----EEEecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCCC
Confidence 6788987 89999999999999876533 2 348999999999999999999999999999999999999
Q ss_pred CeeecCHHHHHHHHHHHcCCCEEEEEecCcccCC-CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 157 EVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 157 ~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~~-~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
+.+++|+|++|+.+|.+|+||+|+|+|||||++. ++++|++++.+|+++++..+.
T Consensus 191 ~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~~a~~i~~i~~~e~~~~~~~~~------------------------ 246 (300)
T 2buf_A 191 ESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGT------------------------ 246 (300)
T ss_dssp CEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEECHHHHHHHHHTTC------------------------
T ss_pred CEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECCCCcChhhCCHHHHHHHHHcCC------------------------
Confidence 9999999999999999999999999999999864 699999999999988864321
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
. +| | |.+||++|..|+++|++++||+|++
T Consensus 247 -----~------------------------~g-g---------------------M~~Kv~aa~~a~~~gv~~v~I~~g~ 275 (300)
T 2buf_A 247 -----I------------------------YG-G---------------------MLPKIRCALEAVQGGVTSAHIIDGR 275 (300)
T ss_dssp -----S------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred -----C------------------------CC-c---------------------cHHHHHHHHHHHHhCCCEEEEeeCC
Confidence 0 22 3 9999999999999999999999999
Q ss_pred cCceeeehhhhcCCCcceeeccc
Q 010815 316 IGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 316 ~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
.|++++.++|++++.||.|.++.
T Consensus 276 ~~~~ll~~~~~~~~~GT~i~~~~ 298 (300)
T 2buf_A 276 VPNAVLLEIFTDSGVGTLISNRK 298 (300)
T ss_dssp STTHHHHHHSSTTCCSEEEECCC
T ss_pred CCchHHHHHhcCCCCceEEEeCC
Confidence 99988889998888999998753
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=329.30 Aligned_cols=243 Identities=28% Similarity=0.388 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++||||||||+++.+++++++++++.+|+|+|+..+++++ ++++|++|+.+++ +
T Consensus 43 ~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~G~l~~~l~~---------~ 113 (299)
T 2ap9_A 43 RRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVN---------L 113 (299)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCSSSSCCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCcccccCCcccCCHHHHHHHHHHHhhHHHHHHHH---------H
Confidence 45899999999999999999999999999999999999999999999999999999 7789999999988 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCc---cCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecC
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCN 162 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~---~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~ 162 (500)
|+++|++ ++++++.|++++++++.++ .+++|+||+|+|..++.+.|+.||++|+|||++|++.++.|+.+++|
T Consensus 114 L~~~g~~----av~lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~ 189 (299)
T 2ap9_A 114 INAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNIN 189 (299)
T ss_dssp HTTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEEC
T ss_pred HHhCCCC----ceEechhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEEC
Confidence 6788887 8999999999999988764 24679999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCcccC---C-CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 163 TYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 163 ~D~~a~~lA~~l~Ad~li~lTdv~gv~---~-~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|.+|+.+|.+|+||+|+|+|||||++ | ++++|++++.+|+++++. .
T Consensus 190 ~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~~~~~i~~is~~e~~~l~~--~--------------------------- 240 (299)
T 2ap9_A 190 ADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLP--T--------------------------- 240 (299)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEEHHHHHHHGG--G---------------------------
T ss_pred HHHHHHHHHHHcCCCEEEEEeCChhhhcCCCCCCcChhhcCHHHHHHHHH--h---------------------------
Confidence 999999999999999999999999984 3 589999999999888742 1
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
.+| | |.+|+++|..|+++|+++++|+|++.|+
T Consensus 241 --------------------------~~g-g---------------------M~~Kl~aa~~a~~~gv~~v~I~~g~~p~ 272 (299)
T 2ap9_A 241 --------------------------LEL-G---------------------MVPKVEACLRAVIGGVPSAHIIDGRVTH 272 (299)
T ss_dssp --------------------------SCT-T---------------------THHHHHHHHHHHHHTCSEEEEEETTSTT
T ss_pred --------------------------hcC-c---------------------hHHHHHHHHHHHHcCCCEEEEecCCCCc
Confidence 122 3 9999999999999999999999999999
Q ss_pred eeeehhhhcCCCcceeecccc
Q 010815 319 VLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~~d~~ 339 (500)
+++.++|++++.||+|.+++-
T Consensus 273 ~ll~~l~~~~~~GT~i~~~~~ 293 (299)
T 2ap9_A 273 CVLVELFTDAGTGTKVVRGEG 293 (299)
T ss_dssp HHHHHHHSCCCCSEEEECCCS
T ss_pred HHHHHHhcCCCCcEEEecCCC
Confidence 988999999999999988764
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=331.33 Aligned_cols=236 Identities=24% Similarity=0.343 Sum_probs=205.2
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
.+.++++||+.|+..|.++|||||||||++.+++++|++++|++|+|+|++++|+++.++++.+|..|++ +
T Consensus 63 ~~~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~RvTd~~~l~vv~m~~~~vn~~lv~---------~ 133 (307)
T 3zzh_A 63 NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVT---------A 133 (307)
T ss_dssp SHHHHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred hHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHHHHH---------H
Confidence 4789999999999999999999999999999999999999999999999999999997777899999988 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ |+++++ +++++++ ++++|+||+|+|++||++.|+.+|++|+|||++|++++.+|+.+|+|+|+
T Consensus 134 L~~~G~~----Av~l~g---g~~~a~~---~~~~d~g~~G~i~~v~~~~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~ 203 (307)
T 3zzh_A 134 LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADV 203 (307)
T ss_dssp HHHTTCC----EEEECS---SSEEEEE---SCHHHHBSBEEEEEECCHHHHHHHHHTCEEEECCCEECTTCBEEBCCHHH
T ss_pred HHhCCCC----eeEEcC---CcEEEEe---cCccccCccccccccCHHHHHHHHHCCCEEEEeCCeECCCCcEEecCHHH
Confidence 7899988 888874 4567776 46679999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC--CCCccccccCHHH-HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCcccc
Q 010815 166 VATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 242 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~--~~g~~I~~i~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (500)
+|+++|.+|+||+|+|+|||||++ +++++|++++..| +++++.++
T Consensus 204 ~A~~lA~~L~Ad~Li~lTdV~GV~~~~~~~~i~~i~~~e~~~~l~~~~-------------------------------- 251 (307)
T 3zzh_A 204 AAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQS-------------------------------- 251 (307)
T ss_dssp HHHHHHHHHCCSEEEEECSSCSCEETTTTEECCEEEHHHHHHHHHTST--------------------------------
T ss_pred HHHHHHHhCCCCEEEEEeCCcceecCCCCcCCcccCHHHHHHHHHhCC--------------------------------
Confidence 999999999999999999999985 5899999999975 66775321
Q ss_pred ccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHH---HHcCCCeEEeeccccCce
Q 010815 243 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV---CRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~ 319 (500)
+.+|| |.+||++|..+ +++| ..++|++ +++
T Consensus 252 ----------------------------------~~tGG---------M~~Kl~aa~~a~~~v~~g-~~v~I~~---~~~ 284 (307)
T 3zzh_A 252 ----------------------------------WVKYG---------TKLKIREIKELLDYLPRS-SSVAIIN---VQD 284 (307)
T ss_dssp ----------------------------------TSCHH---------HHHHHHHHHHHHHHSCTT-CCEEEEC---GGG
T ss_pred ----------------------------------CCCCc---------HHHHHHHHHHHHHHhccC-eEEEEeC---ccH
Confidence 11233 99999954433 3346 4589988 778
Q ss_pred eeehhhhcCCCcceeecccc
Q 010815 320 LLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~~d~~ 339 (500)
++.++|++++.||+|.+...
T Consensus 285 ll~elft~~g~GT~I~~~~~ 304 (307)
T 3zzh_A 285 LQKELFTDSGAGTMIRRGYK 304 (307)
T ss_dssp HHHHHHSCCCCSEEEECCC-
T ss_pred HHHHHhcCCCCcEEEecCCc
Confidence 88999999999999987643
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=329.35 Aligned_cols=242 Identities=29% Similarity=0.472 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|++.|+++||||||||+++..++++++++++.+|+|+|++.+|+.+ ++++|.+|+.|++ +
T Consensus 67 ~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~Rvt~~~~l~~~~~~~~G~in~~l~~---------~ 137 (321)
T 2v5h_A 67 KEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVS---------R 137 (321)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhChHHHHHHH---------H
Confidence 46899999999999999999999999999999999999999999999999999999 7778999999988 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.+++++.+++.+ .+|++++|++..+|.+.|+.||++|+|||++|++.+..|+.+++|+|+
T Consensus 138 L~~~g~~----a~gl~~~~a~~l~a~~~~---~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~ 210 (321)
T 2v5h_A 138 INTTGGR----AVGFCGTDGRLVLARPHD---QEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADT 210 (321)
T ss_dssp HHHHTCC----EEEECTTGGGSEEEEECS---SCSSBSBEEEEEECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHH
T ss_pred HHhCCCC----eeeeChhhccEEEeecCC---CccccccceeEEecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHH
Confidence 6788987 899999999999998765 378999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSV 241 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (500)
+|+.+|.+|+||+|+|+|||||++. ++++|++|+.+|+++++..+. .
T Consensus 211 ~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~~a~~i~~is~~e~~~l~~~g~-----------------------------~ 261 (321)
T 2v5h_A 211 VAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGI-----------------------------V 261 (321)
T ss_dssp HHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCCEEEHHHHHHHHHTTS-----------------------------S
T ss_pred HHHHHHHHcCCCEEEEeeCCCceEcCCCCCCeeeeEEcHHHHHHHHhCCC-----------------------------C
Confidence 9999999999999999999999843 489999999999988864321 1
Q ss_pred cccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceee
Q 010815 242 YSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll 321 (500)
+| | |.+|+++|..|+++|+++++|+|++.|++++
T Consensus 262 ------------------------~g-G---------------------M~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll 295 (321)
T 2v5h_A 262 ------------------------GG-G---------------------MIPKVDCCIRSLAQGVRAAHIIDGRIPHALL 295 (321)
T ss_dssp ------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHH
T ss_pred ------------------------cC-c---------------------HHHHHHHHHHHHHcCCCEEEEEeCCCCchHH
Confidence 22 3 9999999999999999999999999999888
Q ss_pred ehhhhcCCCcceeecccc
Q 010815 322 LELFKRDGMGTMVASDLY 339 (500)
Q Consensus 322 ~~l~~~~~~GT~i~~d~~ 339 (500)
.++|++++.||.|.++.|
T Consensus 296 ~~l~~~~~~GT~I~~~~~ 313 (321)
T 2v5h_A 296 LEIFTDAGIGTMIVGSGY 313 (321)
T ss_dssp HHHHCCCCSEEEEECC--
T ss_pred HHHhcCCCCceEEECCcc
Confidence 899998889999998877
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=325.38 Aligned_cols=240 Identities=27% Similarity=0.423 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|++.|+++||||||||+++..++++++++++.+|+|+|++.+++.+ ++++|.+|+.+++ .
T Consensus 54 ~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~G~~n~~l~~---------~ 124 (298)
T 2rd5_A 54 KSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVS---------L 124 (298)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhchHHHHHHH---------H
Confidence 56899999999999999999999999999999999999999999999999999999 6667999999888 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.+++++.+++.+ +++|++++|+++.+|.+.|+.||++|+|||++|++.+..|+.+++|+|+
T Consensus 125 l~~~g~~----a~~l~~~~~~~l~~~~~~--~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~ 198 (298)
T 2rd5_A 125 INAAGAT----AVGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADT 198 (298)
T ss_dssp HHHTTSC----EEEEETTGGGCEEEEECT--THHHHBSEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEEECHHH
T ss_pred HHhCCCC----ccccChHHCCEEEEEeCC--ccccCCcceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHH
Confidence 7888987 899999999999988865 3368999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccc
Q 010815 166 VATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSV 241 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (500)
+|+.+|.+|+||+|+|+|||||++. ++++|++++.+|+++++..+. .
T Consensus 199 ~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~~a~~i~~is~~e~~~~~~~g~-----------------------------~ 249 (298)
T 2rd5_A 199 VAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGK-----------------------------V 249 (298)
T ss_dssp HHHHHHHHHTCSEEEEEESSSSEESSSSCTTSEECEEEHHHHHHHHHTTS-----------------------------S
T ss_pred HHHHHHHHcCCCEEEEEeCCcCeecCCCCCCCCcccCCHHHHHHHHHCCC-----------------------------C
Confidence 9999999999999999999999843 389999999999988864421 1
Q ss_pred cccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceee
Q 010815 242 YSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL 321 (500)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll 321 (500)
+| | |.+|+++|..|+++|++++||+|++.|++|+
T Consensus 250 ------------------------~g-G---------------------M~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll 283 (298)
T 2rd5_A 250 ------------------------AG-G---------------------MIPKVKCCIRSLAQGVKTASIIDGRRQHSLL 283 (298)
T ss_dssp ------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHH
T ss_pred ------------------------CC-c---------------------hHHHHHHHHHHHHcCCCeEEEecCCCCchHH
Confidence 22 3 9999999999999999999999999999877
Q ss_pred ehhhhcCCCcceeec
Q 010815 322 LELFKRDGMGTMVAS 336 (500)
Q Consensus 322 ~~l~~~~~~GT~i~~ 336 (500)
.++|++++.||+|.+
T Consensus 284 ~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 284 HEIMSDEGAGTMITG 298 (298)
T ss_dssp HHHHSSSCSEEEEEC
T ss_pred HHHhcCCCCceEEeC
Confidence 899998899999964
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=320.37 Aligned_cols=241 Identities=29% Similarity=0.472 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|++.|+++||||||||+++..++++++++++.+|+|+|++.+++.+ ++++|.+|+.+++ +
T Consensus 39 ~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g~r~t~~~~l~~~~~~~~G~~~~~l~~---------~ 109 (282)
T 2bty_A 39 KKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVM---------N 109 (282)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhhHHHHHHHH---------H
Confidence 57899999999999999999999999999999999999999999999999999998 6677999999988 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++++++.+++++.+++.++ +.|++++|+++.+|.+.|+.||++|+|||++|++.++.|+.+++|+|+
T Consensus 110 l~~~g~~----a~~l~~~~~~~l~~~~~~~--~~d~g~~g~v~~~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~ 183 (282)
T 2bty_A 110 LNLHGGR----AVGICGKDSKLIVAEKETK--HGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADT 183 (282)
T ss_dssp HHTTTCC----EEEEETTGGGSEEEEECCT--TCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHH
T ss_pred HHhCCCC----ceecChhhCCEEEEecCCc--ccCCCcceEEEEecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHHH
Confidence 6788887 8999999999999887654 458999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccC
Q 010815 166 VATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (500)
+|+.+|.+|+||+|+|+|||||++.+.++|++++.+|+++++..+. +
T Consensus 184 ~Aa~lA~~l~Ad~liilTDVdGvy~~~~~i~~i~~~e~~~~~~~g~-----------------------------~---- 230 (282)
T 2bty_A 184 AAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGT-----------------------------V---- 230 (282)
T ss_dssp HHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTTTC-----------------------------S----
T ss_pred HHHHHHHHcCCCEEEEEeCCCCeecCchhhhhCCHHHHHHHHHcCC-----------------------------C----
Confidence 9999999999999999999999853229999999999888863321 1
Q ss_pred CCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhh
Q 010815 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELF 325 (500)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~ 325 (500)
+| | |.+|+++|..|+++|++++||+|++.|++++.++|
T Consensus 231 --------------------~g-G---------------------M~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~ 268 (282)
T 2bty_A 231 --------------------TG-G---------------------MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIF 268 (282)
T ss_dssp --------------------CT-T---------------------HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHS
T ss_pred --------------------CC-c---------------------HHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHh
Confidence 22 3 99999999999999999999999999998878999
Q ss_pred hcCCCcceeecc
Q 010815 326 KRDGMGTMVASD 337 (500)
Q Consensus 326 ~~~~~GT~i~~d 337 (500)
++++.||.|.++
T Consensus 269 ~~~~~GT~i~~~ 280 (282)
T 2bty_A 269 SRKGIGTMIKEL 280 (282)
T ss_dssp SSSCSSEEECCC
T ss_pred cCCCCceEEEeC
Confidence 988999999865
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=290.11 Aligned_cols=235 Identities=22% Similarity=0.275 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHcCC-eEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~-~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.+...|. ++|||||+|++++.+++++++++++.+|+|+|+.+.++.+ +++++.+|..+++
T Consensus 20 ~~~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~~~~n~~l~~--------- 90 (258)
T 1gs5_A 20 LERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLA--------- 90 (258)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHHTHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHhccchHHHHH---------
Confidence 6789999998887765 5899999999999999999999999999999999999988 7888999999988
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
.|+++|++ ++++++.+++++++++.+ .|++++|+++.++.+.|+.+|++|+|||++|++.+++|+.+|+|+|
T Consensus 91 ~l~~~G~~----a~~l~~~~~~~~~~~~~~----~d~~~~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~~~D 162 (258)
T 1gs5_A 91 WAKKHQIA----AVGLFLGDGDSVKVTQLD----EELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162 (258)
T ss_dssp HHHHTTCC----EEEECTTGGGCEEEEECC----GGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHH
T ss_pred HHHHCCCC----eEEEeecCCCEEEEEEcC----CCCCCcCceeEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEecHH
Confidence 46889988 999999999999998864 5789999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 165 EVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
.+|+.+|.+|+|| |+|+|||||++ .++++|++++.+|+++++..+. .
T Consensus 163 ~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~~-----------------------------~-- 210 (258)
T 1gs5_A 163 QAATALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI-----------------------------I-- 210 (258)
T ss_dssp HHHHHHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTTC-----------------------------S--
T ss_pred HHHHHHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcCC-----------------------------C--
Confidence 9999999999999 99999999985 5799999999999998864321 1
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeh
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 323 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~ 323 (500)
+| | |.+|+.+|..+|+++..++||+|++.|+. +.+
T Consensus 211 ----------------------~g-G---------------------m~~k~~~a~~~~~~~~~~v~I~~~~~~~~-l~~ 245 (258)
T 1gs5_A 211 ----------------------TD-G---------------------MIVKVNAALDAARTLGRPVDIASWRHAEQ-LPA 245 (258)
T ss_dssp ----------------------CT-H---------------------HHHHHHHHHHHHHHHTSCEEEEESSCGGG-HHH
T ss_pred ----------------------CC-c---------------------HHHHHHHHHHHHHhCCCEEEEecCCCchH-HHH
Confidence 11 3 99999999999987656799999999987 679
Q ss_pred hhhcCCCcceee
Q 010815 324 LFKRDGMGTMVA 335 (500)
Q Consensus 324 l~~~~~~GT~i~ 335 (500)
+|++++.||+|.
T Consensus 246 ~~~~~~~GT~i~ 257 (258)
T 1gs5_A 246 LFNGMPMGTRIL 257 (258)
T ss_dssp HHTTCCSSEEEC
T ss_pred HhcCCCCcEEEe
Confidence 999989999985
|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=287.30 Aligned_cols=225 Identities=11% Similarity=0.133 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCC--ccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR--YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g--~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.++ +.++|||||||||++.++++++++++|... .|. +...+.++...+..+|..+++
T Consensus 29 l~~l~~~i~~l~--~~~~vlVhGGG~~~~~~~~~~gi~~~~~~~~g~~~-~~~G~rvT~~~~~~ln~~l~~--------- 96 (269)
T 3ll9_A 29 LERIASEIGNAS--PSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRR-RRFGFALTQNWVKKLNSHVCD--------- 96 (269)
T ss_dssp HHHHHHHHHHHC--CSSEEEEECCGGGTHHHHHHHTTTSCCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHhc--CCCEEEEECCcHHHHHHHHHcCCCcccccCccccc-ccchhhHHHHHHHHHHHHHHH---------
Confidence 578999999875 689999999999999999999999988620 111 135666664455689998888
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-cccCCC--CCeeec
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSS--GEVLNC 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~--g~~~~i 161 (500)
+|+++|++ ++++++.+..+++ +|++..+|.+.|+.+|++|+|||++| .+++.+ ++.+|+
T Consensus 97 ~L~~~G~~----a~~l~g~~~~~~~--------------~g~v~~v~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~ 158 (269)
T 3ll9_A 97 ALLAEGIP----AVSMQPSAFIRAH--------------AGRISHADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVI 158 (269)
T ss_dssp HHHHTTCC----EEECCGGGTEEEE--------------TTEEEEECCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEE
T ss_pred HHHHCCCc----EEEEcchHcCeEe--------------cCeeeeecHHHHHHHHHCCCEEEECCCEEecccccCcceec
Confidence 57899998 8999999876654 58899999999999999999999999 677778 899999
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCC
Q 010815 162 NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 234 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (500)
|+|++|+.+|.+|+||+|+|+|||||++ |+.++|++++..|+++++....
T Consensus 159 ~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~----------------------- 215 (269)
T 3ll9_A 159 SGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTL----------------------- 215 (269)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC----------------------------------
T ss_pred chHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccC-----------------------
Confidence 9999999999999999999999999983 3467899999988876653210
Q ss_pred CCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 010815 235 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 314 (500)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (500)
+ .+.+|| |.+||++|..||++|+ ++||+|+
T Consensus 216 ---------------------------~-------------~~~tgG---------M~~Kl~aa~~a~~~Gv-~v~I~~g 245 (269)
T 3ll9_A 216 ---------------------------N-------------TDVTGG---------MVGKIRELLLLAEKGV-ESEIINA 245 (269)
T ss_dssp ---------------------------------------------------------SHHHHHHHHHHHTTC-CEEEEES
T ss_pred ---------------------------C-------------CcCcCC---------cHHHHHHHHHHHhCCC-eEEEEeC
Confidence 0 122334 9999999999999999 7999999
Q ss_pred ccCceeeehhhhcCCC-cceee
Q 010815 315 TIGGVLLLELFKRDGM-GTMVA 335 (500)
Q Consensus 315 ~~~~~ll~~l~~~~~~-GT~i~ 335 (500)
+.|++++ ++|++++. ||+|.
T Consensus 246 ~~~~~l~-~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 246 AVPGNIE-RALLGEEVRGTRIT 266 (269)
T ss_dssp SSTTHHH-HHHHTCCCSSEEC-
T ss_pred CCchHHH-HHHCCCCCCcEEEE
Confidence 9999875 99999998 99986
|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=286.51 Aligned_cols=240 Identities=19% Similarity=0.140 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++|||||||++++.+++++++++++ |++.+|+.+ +++++.+|+.|.+.|++ .
T Consensus 32 ~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~------t~~~~l~~~~~~~~G~i~~~l~~~l~~-----~ 100 (316)
T 2e9y_A 32 VKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPE------RPRQPLYIATAMTQAWIGLLLKHSLEE-----E 100 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTT------SCCCCHHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCC------CCHHHHHHHHHHHHhHHHHHHHHHHHH-----H
Confidence 56899999999999999999999999999999999998754 788899998 77899998888877654 7
Q ss_pred hhhcCCCCC----ccccceeeccccEEEEE-EcCcc-C-------Cccccee--ee--------------EeeeCHHHHH
Q 010815 86 IRRHGDSSR----WHEVGVSVASGNFLAAK-RKGVV-D-------GVDYGAT--GE--------------VKKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~----~~a~~l~~~d~~~~~~~-~~~~~-~-------~~d~g~~--G~--------------v~~vd~~~I~ 136 (500)
|..+|++++ +..+++++.|++|..++ +.|.+ + ..+++|+ |. ++.++.+.|+
T Consensus 101 l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~~~~~~~g~g~r~vv~sp~~i~~v~~~~i~ 180 (316)
T 2e9y_A 101 LRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGGFRRVVPSPRPVSIVDRDLIA 180 (316)
T ss_dssp HHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSSEEEEECCCCEEEETTHHHHH
T ss_pred HHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcceeeeccccccceecccCCCcceeehHHHHH
Confidence 888998732 33378999998887754 33432 1 1245564 44 6778999999
Q ss_pred HHHhCCCcEEEc-----CcccCCCC----CeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHH
Q 010815 137 ERLDGGCLVILS-----NLGYSSSG----EVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQE 202 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~~~g----~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e 202 (500)
.||++|+|||++ |++++++| ..+|+|+|++|+++|.+|+||+|+|+|||||++ |++++|++++.+|
T Consensus 181 ~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~LiilTdVdGVy~dp~~p~a~~i~~i~~~e 260 (316)
T 2e9y_A 181 EASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPGVAVNYGREGERWLRRAAASE 260 (316)
T ss_dssp HHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTTSTTCEECSEEEHHH
T ss_pred HHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCEEEEEeCchHhhCCCCCCCCcCCcEEcHHH
Confidence 999999999998 88888877 667889999999999999999999999999984 3589999999999
Q ss_pred HHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCcccccccccccc
Q 010815 203 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 282 (500)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 282 (500)
+++++.++. |.+||
T Consensus 261 ~~~~~~~g~-----------------------------------------------------------------~~~Gg- 274 (316)
T 2e9y_A 261 LKKYLREGH-----------------------------------------------------------------FPPGS- 274 (316)
T ss_dssp HHHHHHTTC-----------------------------------------------------------------SCTTT-
T ss_pred HHHHHhcCC-----------------------------------------------------------------CCCCC-
Confidence 998864321 22334
Q ss_pred chhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 283 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||++|..|+++|++++||++ ++. +.++|++ +.||+|.+
T Consensus 275 --------M~~Kv~aa~~a~~~gv~~v~I~~---~~~-l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 275 --------MGPKVEAAISFVERTGKPAVIGS---LEE-ARQVLSL-QAGTVVML 315 (316)
T ss_dssp --------HHHHHHHHHHHHHHHCSCEEEEE---STT-HHHHHTT-SSSEEEEC
T ss_pred --------HHHHHHHHHHHHHcCCCeEEECc---HHH-HHHHHcC-CCCeEEec
Confidence 99999999999999998899987 343 5678886 78999975
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=278.27 Aligned_cols=241 Identities=16% Similarity=0.163 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++|||||||++++.+++++++++++ +|++++++++ ++++|++++.+.++|++ .
T Consensus 28 ~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~-----~~~~~~l~~~~a~~~G~l~~~i~~al~~-----~ 97 (310)
T 2we5_A 28 LVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSE-----KNPAMPLDTCVAMTQGSIGYWLSNALNQ-----E 97 (310)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSS-----SSCCCCHHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCC-----CCCHHHHHHHHHHhhhHHHHHHHHHHHH-----H
Confidence 56899999999999999999999999999999999988765 4788999999 89999999999876554 5
Q ss_pred hhhcCCCCCccc----cceeeccccEEE-EEEcCcc-CCc----------------cccee---e---eEeeeCHHHHHH
Q 010815 86 IRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVV-DGV----------------DYGAT---G---EVKKVDVTRMRE 137 (500)
Q Consensus 86 l~~~Gi~~~~~a----~~l~~~d~~~~~-~~~~~~~-~~~----------------d~g~~---G---~v~~vd~~~I~~ 137 (500)
|...|+++++.. .+++..|++|.. .++.|++ .+. ..+|. | +++.++.+.|+.
T Consensus 98 l~~~g~~~~v~~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~~~~~~~~~vv~sp~~i~~v~~~~i~~ 177 (310)
T 2we5_A 98 LNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINT 177 (310)
T ss_dssp HHHTTCCCCEEEBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEECTTSCEEEEECCCCEEEETTHHHHHH
T ss_pred HHhcCCchhhHhhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccccCCcceeeccCCcccceeehHHHHHH
Confidence 778888743332 445555555321 2222221 111 12342 3 567799999999
Q ss_pred HHhCCCcEEEc-----Cc-ccCCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHHHH
Q 010815 138 RLDGGCLVILS-----NL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSL 206 (500)
Q Consensus 138 lL~~g~IPVi~-----~~-~~~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~~~ 206 (500)
||++|+|||++ |+ ..+..|+.+|+|+|++|+.+|.+|+||+|+|+|||||++ |++++|++++.+|++++
T Consensus 178 lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~dp~~~~a~~i~~i~~~e~~~~ 257 (310)
T 2we5_A 178 LIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEY 257 (310)
T ss_dssp HHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTSTTCEECCEEEHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhCCCCCCCCeECCEEcHHHHHHH
Confidence 99999999999 66 455678899999999999999999999999999999984 36899999999999888
Q ss_pred HHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhh
Q 010815 207 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 286 (500)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 286 (500)
+..+. |.+||
T Consensus 258 ~~~g~-----------------------------------------------------------------~~~Gg----- 267 (310)
T 2we5_A 258 KQAGH-----------------------------------------------------------------FAPGS----- 267 (310)
T ss_dssp HHTTC-----------------------------------------------------------------SCTTT-----
T ss_pred hhCCC-----------------------------------------------------------------CCCCC-----
Confidence 64321 22233
Q ss_pred hcccchHHHHHHHHHHHcCCC-eEEeeccccCceeeehhhhcCCCcceee
Q 010815 287 RLNGYLSELAAAAFVCRRGVQ-RVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|.+||++|..|+++|++ ++||++ ++. +.++|++++.||+|.
T Consensus 268 ----M~~Kv~aa~~a~~~gv~~~v~I~~---~~~-l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 268 ----MLPKIEAAIQFVESQPNKQAIITS---LEN-LGSMSGDEIVGTVVT 309 (310)
T ss_dssp ----THHHHHHHHHHHHHSTTCEEEEEC---SGG-GGGCBTTBCCSEEEE
T ss_pred ----hHHHHHHHHHHHHcCCCceEEECc---HHH-HHHHHcCCCCCeEEe
Confidence 99999999999999994 899997 444 678888888999985
|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.9e-33 Score=272.84 Aligned_cols=220 Identities=10% Similarity=0.053 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHcC------CeEEEEECChHHHHHHHHHcCCCce----ee---CCccCCCHHHHHHHHHHHhHHHHHH
Q 010815 7 WLVMVQDIAFLHHLG------IRFVLVPGTHVQIDKLLSERGHEAK----YL---GRYRITDSESLAAAMEAAGGIRMMI 73 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G------~~~VIVHGgG~~i~~~~~~~g~~~~----~~---~g~r~t~~~~l~~~~~~~~~i~~~i 73 (500)
+.+++++|+.++..| .++|||||||++++.+++++|++++ +. .|+|+|++++ ..+|..+
T Consensus 32 l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lgi~~~~~~~~~~~~~G~r~T~~a~--------~~ln~~l 103 (266)
T 3k4o_A 32 LERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLKIEDGKKIFINMEKGFWEIQRAM--------RRFNNII 103 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGEEECSSSEEECCHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcCCCcccCcccccccCceeHHHHHH--------HHHHHHH
Confidence 789999999999988 9999999999999999999999987 65 4555544333 4688888
Q ss_pred HHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-ccc
Q 010815 74 EAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGY 152 (500)
Q Consensus 74 ~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~ 152 (500)
++ +|+++|++ ++++++.|.++.+ .| +.+|.+.|+.+|++|+|||++| +++
T Consensus 104 ~~---------~l~~~G~~----a~~l~~~d~~~~~--------------~g--~~v~~~~i~~lL~~g~ipVi~~~~~~ 154 (266)
T 3k4o_A 104 ID---------TLQSYDIP----AVSIQPSSFVVFG--------------DK--LIFDTSAIKEMLKRNLVPVIHGDIVI 154 (266)
T ss_dssp HH---------HHHTTTCC----EEEECGGGTCEES--------------SS--CBCCCHHHHHHHHTTCEEEEECEEEE
T ss_pred HH---------HHHHCCCc----EEEeeHHHcCccc--------------Cc--eEecHHHHHHHHHCCCEEEEeCCEEE
Confidence 87 57889988 8888888766543 12 5789999999999999999998 677
Q ss_pred CCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhccccccc
Q 010815 153 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCF 232 (500)
Q Consensus 153 ~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
+++++.+|+|+|++|+.+|.+|+||+|+|+|||||++.|+++|++++..|++++...-.
T Consensus 155 ~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~d~~~i~~~~~~e~~~l~~~~~--------------------- 213 (266)
T 3k4o_A 155 DDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDNKPIKRIDKNNIYKILNYLS--------------------- 213 (266)
T ss_dssp ESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSBSSSSBCSEECTTTHHHHHHHHH---------------------
T ss_pred cCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEEeCCeecCcCCHHHHHHHHHHhc---------------------
Confidence 88888999999999999999999999999999999988899999999888777763210
Q ss_pred CCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEee
Q 010815 233 GHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 312 (500)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (500)
| .++ .+.+|| |.+||++|..||+ ++||+
T Consensus 214 ----------~----------------~~~-------------~~~tGG---------M~~Kv~aa~~a~~----~v~I~ 241 (266)
T 3k4o_A 214 ----------G----------------SNS-------------IDVTGG---------MKYKIEMIRKNKC----RGFVF 241 (266)
T ss_dssp ----------S----------------TTC-------------SCCSSH---------HHHHHHHHHHTTC----EEEEE
T ss_pred ----------c----------------ccC-------------CcccCC---------HHHHHHHHHHHhc----CEEEE
Confidence 0 001 133455 9999999999997 79999
Q ss_pred ccccCceeeehhhhcCCCcceeecc
Q 010815 313 DGTIGGVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 313 ~~~~~~~ll~~l~~~~~~GT~i~~d 337 (500)
|++.|+. +.++|++++.||+|.+.
T Consensus 242 ~g~~~~~-l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 242 NGNKANN-IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp ETTSTTH-HHHHHTTCCCSEEEECC
T ss_pred eCCCccH-HHHHhCCCCCceEEEeC
Confidence 9999997 67999999999999874
|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=278.27 Aligned_cols=242 Identities=18% Similarity=0.182 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++||||||||+++.++.++++++++ + +|++.+++++ ++.++++|+.|++.|++ .
T Consensus 30 ~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~-~---~~~~~~l~~~~a~~~G~i~~~l~~~l~~-----~ 100 (314)
T 1e19_A 30 VRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQAT-Y---GIPAQPMDVAGAMSQGWIGYMIQQALKN-----E 100 (314)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHH-H---CCCCCCHHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCcccc-C---CCChhHHHHHHHHHhhHHHHHHHHHHHH-----H
Confidence 56899999999999999999999999999999999988766 3 6788899998 78899999999887765 7
Q ss_pred hhhcCCCCC----ccccceeeccccEEEEEE-cCc-cCC-------ccccee--ee--------------EeeeCHHHHH
Q 010815 86 IRRHGDSSR----WHEVGVSVASGNFLAAKR-KGV-VDG-------VDYGAT--GE--------------VKKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~----~~a~~l~~~d~~~~~~~~-~~~-~~~-------~d~g~~--G~--------------v~~vd~~~I~ 136 (500)
|.++|+++. +..+++++.|++|...++ .|. +.. .++||+ |. ++.++.+.|+
T Consensus 101 l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~~~g~~~~~~~~~v~s~~~i~~v~~~~i~ 180 (314)
T 1e19_A 101 LRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIK 180 (314)
T ss_dssp HHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSCEEEEECCCCEEEETTHHHHH
T ss_pred HHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCccccccccccccccccCcccceeehHHHHH
Confidence 889998731 223678888887766432 232 110 134443 22 7789999999
Q ss_pred HHHhCCCcEEEc-----CcccCCC---CCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 137 ERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~~~---g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
.||++|+|||++ |++.+.+ |..+|+|+|++|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+
T Consensus 181 ~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p~~~a~~i~~i~~~e~ 260 (314)
T 1e19_A 181 KLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEEL 260 (314)
T ss_dssp HHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTTSTTCEECCEEEHHHH
T ss_pred HHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEECCCCCCCCeECCEECHHHH
Confidence 999999999998 8877665 5567899999999999999999999999999983 35899999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++..+. +.+||
T Consensus 261 ~~~~~~g~-----------------------------------------------------------------~~~Gg-- 273 (314)
T 1e19_A 261 RKYYEEGH-----------------------------------------------------------------FKAGS-- 273 (314)
T ss_dssp HHHHHTTC-----------------------------------------------------------------SCTTT--
T ss_pred HHHHhCCC-----------------------------------------------------------------cCCCC--
Confidence 88864321 22333
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||++|..+|++|+.++||+++ + .+.++|++ +.||+|.+
T Consensus 274 -------M~~Kv~aa~~~~~~~~~~v~I~~~---~-~l~~~~~g-~~GT~i~~ 314 (314)
T 1e19_A 274 -------MGPKVLAAIRFIEWGGERAIIAHL---E-KAVEALEG-KTGTQVLP 314 (314)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEEEG---G-GHHHHHTT-SSSEEEEC
T ss_pred -------hHHHHHHHHHHHHhCCCeEEEecH---H-HHHHHHcC-CCCeEEcC
Confidence 999999999999998889999985 2 26788876 58999964
|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=266.81 Aligned_cols=240 Identities=16% Similarity=0.147 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchhh
Q 010815 8 LVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 8 ~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
...++.|+.|...|+++||+||||||++.++..+....+ ..++.+|+.+ .+++|+|.+.|+++|.+ +|
T Consensus 34 ~~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~~------~~~~~pld~~~A~sqG~igy~l~~al~~-----~l 102 (317)
T 3kzf_A 34 EIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAG------VSPEMPLHVCGAMSQGFIGYMMSQAMDN-----VF 102 (317)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTTS------SSCCCCHHHHHHHHHHHHHHHHHHHHHH-----HH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc------cCCCCCccccCchhhHHHHHHHHHHHHH-----HH
Confidence 467889999999999999999999999988776554321 2478899999 99999999999888876 88
Q ss_pred hhcCCCCCccccceee----ccccEEE-EEEcCccC-----------------Ccc--cceeee------EeeeCHHHHH
Q 010815 87 RRHGDSSRWHEVGVSV----ASGNFLA-AKRKGVVD-----------------GVD--YGATGE------VKKVDVTRMR 136 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~----~d~~~~~-~~~~~~~~-----------------~~d--~g~~G~------v~~vd~~~I~ 136 (500)
.++|+++++.++-.+. .|..|-. .+|.|++. ..| .||.-. ++.||.+.|+
T Consensus 103 ~~~g~~~~v~t~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~~~~ed~grg~RrvV~sP~P~~iVe~~~I~ 182 (317)
T 3kzf_A 103 CANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPSPRPLEIVEYGVIK 182 (317)
T ss_dssp HHTTCCCCEEEBCCEEEECTTCGGGTSCCEECC--------------------------CCCCEECCCCEEEETTHHHHH
T ss_pred HhcCCCCceeEEEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCCeEeecCCCCeeeecCCCCCcceECHHHHH
Confidence 9999987777655554 2444433 23333221 111 233332 4679999999
Q ss_pred HHHhCCCcEEEc-----CcccC---CCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHH
Q 010815 137 ERLDGGCLVILS-----NLGYS---SSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~-----~~~~~---~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~ 203 (500)
.||++|+|||++ |+..+ ..|..+|+|+|++|+.+|.+|+||+|+|||||||++ +++++|++++.+|+
T Consensus 183 ~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~dp~~p~a~~I~~it~~e~ 262 (317)
T 3kzf_A 183 TLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACINYKKPDERKLEEIKLSEI 262 (317)
T ss_dssp HHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEESSSCSSCEECCEEEHHHH
T ss_pred HHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeCCCCCCCCeECcCcCHHHH
Confidence 999999998888 76654 235667999999999999999999999999999973 56899999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++.++. |.+||
T Consensus 263 ~~li~~g~-----------------------------------------------------------------~~~GG-- 275 (317)
T 3kzf_A 263 LALEKDGH-----------------------------------------------------------------FAAGS-- 275 (317)
T ss_dssp HHHHTTTS-----------------------------------------------------------------CC--C--
T ss_pred HHHHhcCC-----------------------------------------------------------------CCCCC--
Confidence 99874321 33444
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeecc
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~d 337 (500)
|.+||++|..||++|+.++||+|+.. +.++++++ .||+|.+|
T Consensus 276 -------M~pKl~AA~~av~~gg~~v~I~s~~~----l~~~l~G~-~GT~I~~d 317 (317)
T 3kzf_A 276 -------MGPKVRAAIEFTQATGKMSIITSLST----AVDALNGK-CGTRIIKD 317 (317)
T ss_dssp -------CHHHHHHHHHHHHHHCCCEEECCGGG----HHHHHTTS-SSEEEECC
T ss_pred -------HHHHHHHHHHHHHcCCCeEEEcchHH----HHHHHCCC-CCeEEecC
Confidence 99999999999999999999999642 45777766 79999874
|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=253.77 Aligned_cols=210 Identities=13% Similarity=0.064 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHcCCeEE-EEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~V-IVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+. |+++| ||||||++++.+++++++++++++ |+...|.++.+++..+|..+++ +
T Consensus 29 l~~l~~~i~~----G~~vv~lVhGGG~~~~~~~~~~gi~~~~~~----~d~~gl~~t~~~~~~ln~~~v~---------~ 91 (249)
T 3ll5_A 29 IRSIVKVLSG----IEDLVCVVHGGGSFGHIKAMEFGLPGPKNP----RSSIGYSIVHRDMENLDLMVID---------A 91 (249)
T ss_dssp HHHHHHHHHT----CTTEEEEEECCGGGTHHHHHHHTCSEECCH----HHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHhc----CCceEEEEECccHHHHHHHHHhCCCcCCCc----cccccHHHHHHHHHHHHHHHHH---------H
Confidence 5667777764 99999 999999999999999999988754 6788899986667899999987 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCCCCeeecCHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNCNTY 164 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i~~D 164 (500)
|+++|++ ++++++.+.. ++|++ +.+.|+.||++|+|||++|. +.+.+++.+|+|+|
T Consensus 92 l~~~G~~----a~~l~~~~~~----------------~~g~v---~~~~i~~ll~~g~ipVi~~~~~~~~~~~~~~~~~D 148 (249)
T 3ll5_A 92 MIEMGMR----PISVPISALR----------------YDGRF---DYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGD 148 (249)
T ss_dssp HHHTTCC----EEECCGGGSC----------------BSSSB---CCHHHHHHHHTTCEEEEECEEEEEETTEEEEECHH
T ss_pred HHHCCCc----EEEEcHHHcc----------------cccEE---cHHHHHHHHHCCCEEEECCCEEEcCCCceeeecHH
Confidence 7899998 8888877653 35665 99999999999999999984 33446778999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccCC-C------CccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILDE-S------GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~~-~------g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
++|+.+|.+|+||+|+|+|||||++. + .++|++++. +++....
T Consensus 149 ~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~~----------------------------- 198 (249)
T 3ll5_A 149 DIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDRV----------------------------- 198 (249)
T ss_dssp HHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC----------------------------------
T ss_pred HHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhcccC-----------------------------
Confidence 99999999999999999999999842 2 466777731 1111100
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHH-HHcCCCeEEeecccc
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV-CRRGVQRVHLLDGTI 316 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 316 (500)
..+.+|| |.+||++|..| +++|+ ++||+||+.
T Consensus 199 -------------------------------------~~~~tGg---------M~~Kl~aA~~a~~~~Gv-~v~I~~g~~ 231 (249)
T 3ll5_A 199 -------------------------------------QNDVTGG---------IGKKFESMVKMKSSVKN-GVYLINGNH 231 (249)
T ss_dssp ------------------------------------------------------HHHHHHHHHHHTTCTT-CEEEEETTS
T ss_pred -------------------------------------CCeeECC---------HHHHHHHHHHHHHhcCC-EEEEEeCCC
Confidence 0133444 99999999999 88999 799999999
Q ss_pred CceeeehhhhcCCC-cceee
Q 010815 317 GGVLLLELFKRDGM-GTMVA 335 (500)
Q Consensus 317 ~~~ll~~l~~~~~~-GT~i~ 335 (500)
|++++. ++ +++. ||.|.
T Consensus 232 ~~~l~~-l~-g~~~~GT~i~ 249 (249)
T 3ll5_A 232 PERIGD-IG-KESFIGTVIR 249 (249)
T ss_dssp GGGGGG-TT-STTCCSEEEC
T ss_pred hhHHHH-hC-CCCCCCEEeC
Confidence 999877 54 5777 99883
|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=258.15 Aligned_cols=244 Identities=16% Similarity=0.153 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
...++++|+.|+..|+++|||||||||++.++.+++...... +.++..+++++ .++++.+++.|++.|.+ +
T Consensus 47 ~~~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~~~~---~~~~~~~l~~~~a~tqg~ig~~l~~~l~~-----~ 118 (332)
T 4axs_A 47 VKIPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAKKAN---EKTALVPFAEAGGMSQGYIGYHMLTAISN-----E 118 (332)
T ss_dssp THHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTTTT---SCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhcccc---CCCCCchhHHHHHHHHHHHHHHHHHHHHH-----H
Confidence 347899999999999999999999999998877765544333 23556677777 78999999999888765 7
Q ss_pred hhhcCCCCCcc----ccceeeccccEEE-EEEcCcc-----------------CCcccce------eeeEeeeCHHHHHH
Q 010815 86 IRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV-----------------DGVDYGA------TGEVKKVDVTRMRE 137 (500)
Q Consensus 86 l~~~Gi~~~~~----a~~l~~~d~~~~~-~~~~~~~-----------------~~~d~g~------~G~v~~vd~~~I~~ 137 (500)
|.++|++.++. .+.++..|..|.. .++.|.. .....|| .+.++.++.+.|..
T Consensus 119 l~~~gi~~~v~~~vtqv~V~~~D~af~~p~K~iG~~~~~~ea~~l~~~~~~~~~~~~~g~rrvV~sp~p~~ive~~~I~~ 198 (332)
T 4axs_A 119 LKKLNIQKDVLYFLTQTIVDANDPAFKNPTKPVGPFYSSKEIAEANNPNSVIVEDAGRGFRKVVASPIPVDFIGIDAIKQ 198 (332)
T ss_dssp HHHTTCCCCEEECCCEEEECTTCHHHHSCCEECSCCCC--------CTTSCCC--------CEECCCCEEEETTHHHHHH
T ss_pred HHhcCCCcceeeeeeeeeecccchhhhCcCceeccccCHHHHHHHHhcCCEEEEccCCCceEECCCCCCceeecHHHHHH
Confidence 88888875433 2344455544443 2222321 1112233 34456789999999
Q ss_pred HHhCCCcEEEcCc-----cc---CCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHH
Q 010815 138 RLDGGCLVILSNL-----GY---SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEAD 204 (500)
Q Consensus 138 lL~~g~IPVi~~~-----~~---~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~ 204 (500)
|+++|+|||+++. .. +..|..+|+|+|.+|+.||.+|+||+|||||||||++ |+.++|++++.+|++
T Consensus 199 L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~~~~~~~i~~it~~e~~ 278 (332)
T 4axs_A 199 NVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVDYVYVDFNKPTQKALKTVDVKALN 278 (332)
T ss_dssp HHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTSTTCEECSSCBHHHHH
T ss_pred hhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCCceEcCCCCcchhhcccCCHHHHH
Confidence 9999999887532 11 2246778999999999999999999999999999983 456899999999999
Q ss_pred HHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccch
Q 010815 205 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 284 (500)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 284 (500)
+++.++. |++||
T Consensus 279 ~~~~~g~-----------------------------------------------------------------~~~Gg--- 290 (332)
T 4axs_A 279 NFINQDQ-----------------------------------------------------------------FAKGS--- 290 (332)
T ss_dssp HHHHTTC-----------------------------------------------------------------SCTTT---
T ss_pred HHHHCCC-----------------------------------------------------------------cCcCC---
Confidence 9986532 44455
Q ss_pred hhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 285 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||+||..|++.|+.+++|+. + ++. +.+++.++ .||+|++
T Consensus 291 ------M~pKv~Aa~~~v~~g~g~~~iI~-~-~~~-~~~~l~g~-~GT~IvA 332 (332)
T 4axs_A 291 ------MLPKIKAAMGFVNGHPNRSAIIA-D-LSK-VEDALKGL-SGTKIIA 332 (332)
T ss_dssp ------THHHHHHHHHHHTTCTTCEEEEE-C-STT-HHHHTTTS-SSEEEBC
T ss_pred ------cHHHHHHHHHHHHhCCCcEEEEC-C-HHH-HHHHHCCC-CCcEEeC
Confidence 99999999999999998888873 3 333 35566554 6999863
|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-30 Score=253.96 Aligned_cols=223 Identities=15% Similarity=0.173 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHcCC-eEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~-~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|++.|+ ++|||||||++++.++.++++++++. .. ...+.++.+|..+++ +
T Consensus 49 l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~l~~~~~~~~~~-------~~---~~~vt~g~l~~~l~~---------~ 109 (286)
T 3d40_A 49 VTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFS-------LA---GLTEATFEVKKRWAE---------K 109 (286)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEECCCCC------------CCT-------TH---HHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHcCCCcccc-------hh---cchhhHHHHHHHHHH---------H
Confidence 6789999999999998 79999999999999999888775431 11 224455788888888 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-cccCCCCCeeecCHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNTY 164 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i~~D 164 (500)
|+++|++ +.++++.+++| + . + | ++.++.+.|+.||++|+|||+++ .+.+.++++.|+|+|
T Consensus 110 l~~~G~~----a~~l~~~~~~~-t--~-------d----g-~~~~~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D 170 (286)
T 3d40_A 110 LRGIGVD----AFPLQLAAMCT-L--R-------N----G-IPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSD 170 (286)
T ss_dssp HHHTTCC----EEECCGGGTEE-E--E-------T----T-EEEECCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECGG
T ss_pred HHHcCCc----EEEEEeecCCc-c--c-------C----C-eEEehHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHH
Confidence 7788988 78888888876 2 1 1 3 67889999999999999999998 777888889999999
Q ss_pred HHHHHHHHH-cCCCEEEEEecCcccC-C---CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 165 EVATACALA-IEADKLICIIDGPILD-E---SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 165 ~~a~~lA~~-l~Ad~li~lTdv~gv~-~---~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
++|+.+|.+ |+||+|+|+|||||++ . ++++|++|+..|+++++..-..
T Consensus 171 ~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~~a~~i~~is~~e~~~l~~~~~~--------------------------- 223 (286)
T 3d40_A 171 RVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQAYAALWG--------------------------- 223 (286)
T ss_dssp GHHHHTTTTCCSCEEEEEEESSSSCEECC---CEECCEEETTSCHHHHHHHHH---------------------------
T ss_pred HHHHHHHHhhCCCCEEEEecCCCeeEcCCCCCCcCCcccCHHHHHHHHHhhcc---------------------------
Confidence 999999999 9999999999999984 2 3899999998876666432100
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
++ ..|.+|| |.+|++||..|+++|++ ++|+|++.|++
T Consensus 224 --------------------------~~-------~~~~tgg---------M~~Kl~Aa~~a~~~gv~-v~I~~g~~p~~ 260 (286)
T 3d40_A 224 --------------------------SS-------EWDATGA---------MHTKLDALVTCARRGAE-CFIMRGDPGSD 260 (286)
T ss_dssp --------------------------SC-------C----CH---------HHHHHHHHHHHHHTTCE-EEEEECCTTCC
T ss_pred --------------------------cc-------CCcccCc---------HHHHHHHHHHHHHCCCc-EEEEeCCCCCc
Confidence 00 0133445 99999999999999997 99999999998
Q ss_pred eeehhhhc-----CCC-cceeeccc
Q 010815 320 LLLELFKR-----DGM-GTMVASDL 338 (500)
Q Consensus 320 ll~~l~~~-----~~~-GT~i~~d~ 338 (500)
+ .++|++ +.. ||.|..+.
T Consensus 261 l-~~l~t~~~~~~~~~~~t~i~~~~ 284 (286)
T 3d40_A 261 L-EFLTAPFSSWPAHVRSTRITTTA 284 (286)
T ss_dssp C-GGGGSCGGGSCTTCCCEEEEC--
T ss_pred H-HHHhcCcccCcccccceeeeecc
Confidence 6 889987 665 99997643
|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-27 Score=228.77 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|+.. +++|||||||++ ..+.+++++. .++++...+. ...+..++..+.+ +|
T Consensus 24 ~~~~~~~i~~l~~~-~~vVlVhgGg~~--~~~~~~g~~~-----~~~~~~~~l~--~~~q~~l~~~~~~---------~l 84 (251)
T 2ako_A 24 LKNLVAFLAKLMEK-YEVILVTSAAIS--AGHTKLDIDR-----KNLINKQVLA--AIGQPFLISVYNE---------LL 84 (251)
T ss_dssp HHHHHHHHHHHHHH-SEEEEEECCHHH--HHHHHCCCCS-----SSHHHHHHHH--HHHHHHHHHHHHH---------HH
T ss_pred HHHHHHHHHHHHhC-CCEEEEECCHHH--HHHHHhCCcc-----CCchHHHHHH--HHHHHHHHHHHHH---------HH
Confidence 57899999999988 999999999966 5678888876 2344332222 2233444555555 57
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCH-HHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~-~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
+++|++ +..+...+. .++++++.++. +.|+.||++|+|||+++.+....++..++|+|+
T Consensus 85 ~~~G~~----~~~i~~~~~----------------~~~~~~~~~~~~~~i~~ll~~g~ipVi~~~d~v~~~~~~~~~~D~ 144 (251)
T 2ako_A 85 AKFNKL----GGQILLTGK----------------DFDSRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDS 144 (251)
T ss_dssp GGGTCC----EEEEEECTG----------------GGGCHHHHHHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTHH
T ss_pred HHcCCc----EEEEEeccc----------------hhcCcceEehHHHHHHHHHHCCCEEEEeCCCceeecceeecCchH
Confidence 788887 333332221 13555666776 999999999999999943211123347899999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHH--HHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
+|+.+|.+|+||+|+|+|||||++ |++++|++++.. |+.+++....
T Consensus 145 ~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~------------------------- 199 (251)
T 2ako_A 145 LSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTG------------------------- 199 (251)
T ss_dssp HHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC--------------------------------
T ss_pred HHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccC-------------------------
Confidence 999999999999999999999983 468999999987 7777653210
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
.+|.+|| |.+|+++|..|+++|++ +||+|++.
T Consensus 200 --------------------------------------~~~~~gg---------m~~k~~aa~~a~~~gv~-v~I~~g~~ 231 (251)
T 2ako_A 200 --------------------------------------SEHGTGG---------IVTKLKAAKFLLEHNKK-MFLASGFD 231 (251)
T ss_dssp ----------------------------------------CBSCH---------HHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred --------------------------------------CCCccCc---------hHHHHHHHHHHHHCCCe-EEEEeCCC
Confidence 0133445 99999999999999997 99999999
Q ss_pred Cceeeeh--hhhcCCCcceee
Q 010815 317 GGVLLLE--LFKRDGMGTMVA 335 (500)
Q Consensus 317 ~~~ll~~--l~~~~~~GT~i~ 335 (500)
|+++ .+ +|++++.||+|.
T Consensus 232 ~~~l-~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 232 LSVA-KTFLLEDKQIGGTLFE 251 (251)
T ss_dssp CHHH-HHHHHSCCCCSSEEEC
T ss_pred hhhh-hhhHHhcCCCCceEeC
Confidence 9986 67 888888999984
|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=216.60 Aligned_cols=194 Identities=16% Similarity=0.142 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH---HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCc
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL---LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPI 83 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~---~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~ 83 (500)
+.+++++|+.|+..|+++|||||||++++.+ +++++++. .+++...++...+|..+++.
T Consensus 20 ~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~-----------~~~~~~~~~~~~~~~~l~~~------- 81 (226)
T 2j4j_A 20 LIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGE-----------AYLDLLGIWASRLNAYLVMF------- 81 (226)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCCH-----------HHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCCc-----------ccHHHHHHHHHHHHHHHHHH-------
Confidence 5689999999999999999999999999986 77887652 56777766677888888652
Q ss_pred hhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCH
Q 010815 84 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 163 (500)
Q Consensus 84 ~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~ 163 (500)
.|+.+|++ + + .++.+.|+.+|+.|+|||++| + ..++|+
T Consensus 82 -~l~~~g~~----~------~------------------------~~~~~~i~~ll~~g~ipVi~g-g------~~~~~~ 119 (226)
T 2j4j_A 82 -SLQDLAYM----H------V------------------------PQSLEEFIQDWSHGKVVVTGG-F------QPGQST 119 (226)
T ss_dssp -HHTTSBCS----C------C------------------------CSSHHHHHHHHTTSSBEEECC-C------STTSCH
T ss_pred -HHHHhCCC----C------C------------------------cCCHHHHHHHHHCCCEEEEcC-C------CCCCCc
Confidence 46677765 2 1 247889999999999999999 2 238999
Q ss_pred HHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 164 YEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.+++..+
T Consensus 120 D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~-------------------------- 173 (226)
T 2j4j_A 120 AAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGS-------------------------- 173 (226)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC----------------------------
T ss_pred HHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcC--------------------------
Confidence 99999999999999999999999983 358999999999988875321
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccc--hHHHHHHHHHHHcCCCeEEeecc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY--LSELAAAAFVCRRGVQRVHLLDG 314 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 314 (500)
++.+| | | .+|+.+|..|+++|++ +||+|+
T Consensus 174 --------------------------~~~~g-g---------------------m~~~~k~~a~~~a~~~gi~-v~I~~~ 204 (226)
T 2j4j_A 174 --------------------------QSVQA-G---------------------TYELLDPLAIKIVERSKIR-VIVMNY 204 (226)
T ss_dssp --------------------------------------------------------CCSCHHHHHHHHHTTCE-EEEEEG
T ss_pred --------------------------CCCcC-C---------------------ccccchHHHHHHHHHCCCe-EEEEeC
Confidence 01122 3 7 9999999999999997 999999
Q ss_pred ccCceeeehhhhcCCCcceeec
Q 010815 315 TIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 315 ~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
+.|+++ .++|++++.||.|.+
T Consensus 205 ~~~~~l-~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 205 RKLNRI-IDILKGEEVSSIIEP 225 (226)
T ss_dssp GGGGGH-HHHHTTCSSCEEEEC
T ss_pred CChhHH-HHHHcCCCCceEEee
Confidence 999986 789998889999975
|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=231.70 Aligned_cols=218 Identities=19% Similarity=0.265 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHH--HHHh--HHHHHHHHhhCCCCC
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM--EAAG--GIRMMIEAKLSPGPP 82 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~--~~~~--~i~~~i~~~l~~~~~ 82 (500)
+.+++++|+.|+..|+++|||||||.+.+ +.+++++.+ +.+++... .+.| .++..+.+
T Consensus 28 l~~la~~Ia~l~~~G~~vVlV~gGgi~~g--~~~lg~~~~---------~~~l~~~qa~aavGq~~l~~~~~~------- 89 (367)
T 2j5v_A 28 IVELVRQCAQLHAAGHRIVIVTSGAIAAG--REHLGYPEL---------PATIASKQLLAAVGQSRLIQLWEQ------- 89 (367)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHH--HHHHTSCCC---------CSSHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHhCCCcEEEEEcCHHHHH--HHHcCCCCC---------CCCHHHHHHHHHHHHHHHHHHHHH-------
Confidence 57899999999999999999999997655 467777643 12333331 2233 34555555
Q ss_pred chhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCH-HHHHHHHhCCCcEEEcCcccCCCCCeeec
Q 010815 83 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILSNLGYSSSGEVLNC 161 (500)
Q Consensus 83 ~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~-~~I~~lL~~g~IPVi~~~~~~~~g~~~~i 161 (500)
.|+++|++ +..+..... .+.++.+.+|. +.|+.||+.|+|||+++++....++..++
T Consensus 90 --~l~~~G~~----~~qvllt~~----------------d~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~el~~g 147 (367)
T 2j5v_A 90 --LFSIYGIH----VGQMLLTRA----------------DMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVG 147 (367)
T ss_dssp --HHHTTTCC----EEEEEECGG----------------GGSSHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCGGGCCC
T ss_pred --HHHHcCCc----eEEEEEecc----------------cccCceEEEhHHHHHHHHHHCCCEEEECCCCceecccccCC
Confidence 57888887 322222211 13445556676 89999999999999997765555668899
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhccccccc
Q 010815 162 NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCF 232 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
|+|++|+.+|.+|+||+|+|+|||||++ |++++|++++. +|+++++...
T Consensus 148 d~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~---------------------- 205 (367)
T 2j5v_A 148 DNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDS---------------------- 205 (367)
T ss_dssp SHHHHHHHHHHHHTCSEEEEEECC--------------------------------------------------------
T ss_pred CHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhcc----------------------
Confidence 9999999999999999999999999983 25899999998 7777775321
Q ss_pred CCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEee
Q 010815 233 GHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 312 (500)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (500)
+++ |.+|| |.+|++||..|+++|++ ++|+
T Consensus 206 ----------------------------~s~-------------~gtGg---------M~~Kl~Aa~~a~~~Gv~-v~I~ 234 (367)
T 2j5v_A 206 ----------------------------VSG-------------LGTGG---------MSTKLQAADVACRAGID-TIIA 234 (367)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHHHHTTCE-EEEE
T ss_pred ----------------------------CCC-------------cCcCc---------cHHHHHHHHHHHHcCCC-EEEE
Confidence 011 22334 99999999999999997 9999
Q ss_pred ccccCceeeehhhhcCCCcceeeccc
Q 010815 313 DGTIGGVLLLELFKRDGMGTMVASDL 338 (500)
Q Consensus 313 ~~~~~~~ll~~l~~~~~~GT~i~~d~ 338 (500)
|++.|+.| .++++++..||.|.++.
T Consensus 235 ~g~~~~~L-~~~l~g~~~GT~i~~~~ 259 (367)
T 2j5v_A 235 AGSKPGVI-GDVMEGISVGTLFHAQA 259 (367)
T ss_dssp ETTSTTHH-HHHHHTCCCSEEECCCS
T ss_pred cCCCchHH-HHHhcCCCCcEEEEcCc
Confidence 99999975 88999989999998754
|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=216.11 Aligned_cols=194 Identities=13% Similarity=0.040 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHH---HHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCc
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPI 83 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~---~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~ 83 (500)
+.+++++|+.|+. |+++|||||||++++. .++++++ +...++...++...+|..+++.
T Consensus 41 i~~~~~~i~~l~~-g~~vViV~GgG~~~~~~~~~~~~~gl-----------~~~~~~~~~~~~~~~~~~l~~~------- 101 (244)
T 2brx_A 41 IKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNS-----------SETFKDFIGIQITRANAMLLIA------- 101 (244)
T ss_dssp HHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHhC-CCeEEEEECccHHHhchHHHHHHcCC-----------CcccHHHHHHHHHHHHHHHHHH-------
Confidence 5789999999999 9999999999999998 4666665 3456777655677888888652
Q ss_pred hhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCH
Q 010815 84 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 163 (500)
Q Consensus 84 ~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~ 163 (500)
.|.++|++ + ..++.+.+..+|+.|+|||++| |..++ |+
T Consensus 102 -~l~~~g~~----~------------------------------~~~~~~~i~~lL~~g~IpVi~g------g~~~~-~~ 139 (244)
T 2brx_A 102 -ALREKAYP----V------------------------------VVEDFWEAWKAVQLKKIPVMGG------THPGH-TT 139 (244)
T ss_dssp -HHGGGBCS----S------------------------------CBCSHHHHHHHHHTTCBCEECC------CSTTC-CH
T ss_pred -HHHHcCCC----C------------------------------CcCCHHHHHHHHhCCCEEEEcC------CCCCC-Cc
Confidence 46677765 1 1247888999999999999999 33444 99
Q ss_pred HHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 164 YEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
|++|+.+|.+|+||+|+|+|||||++ |++++|++++..|+++++....
T Consensus 140 D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g------------------------- 194 (244)
T 2brx_A 140 DAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGI------------------------- 194 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC---------------------------
T ss_pred hHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccC-------------------------
Confidence 99999999999999999999999983 3589999999999988864310
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
+..|| |.+|..+|..+++.++.+++|+|++.
T Consensus 195 ----------------------------------------~~~g~---------m~~~~~~A~~~~~~~~~~v~I~ng~~ 225 (244)
T 2brx_A 195 ----------------------------------------EKAGS---------SSVIDPLAAKIIARSGIKTIVIGKED 225 (244)
T ss_dssp -------------------------------------------------------CCSCHHHHHHHHHHTCCEEEECHHH
T ss_pred ----------------------------------------CCCCC---------CcchHHHHHHHHHHCCCeEEEEeCCC
Confidence 11122 66667778888777666799999999
Q ss_pred CceeeehhhhcCCCcceeec
Q 010815 317 GGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~~ 336 (500)
|+.+ .++|++++.||.|.+
T Consensus 226 ~~~l-~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 226 AKDL-FRVIKGDHNGTTIEP 244 (244)
T ss_dssp HTCH-HHHHTTCSSSEEECC
T ss_pred hhHH-HHHHcCCCCceEecC
Confidence 9976 788988889999964
|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=214.77 Aligned_cols=202 Identities=17% Similarity=0.064 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.++..|+++|||||||+++..+..+ ..| +++..+.+...++.+.+|..+++. +|
T Consensus 32 i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-------~~G--~~~~~~~~~~~~la~~~n~~l~~~--------~l 94 (240)
T 4a7w_A 32 LDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-------QGG--IIRRTSGDYMGMLATVINAVAMQE--------AL 94 (240)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTTC------------------CCCHHHHHHHHHHHHHHHHHHHHH--------HH
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-------hcC--CCCCCCHHHHHHHHHHHHHHHHHH--------HH
Confidence 5689999999999999999999999987544321 123 233444444444667889888743 68
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
+++|++ ++++++.|.... .+.++.+.+..+|+.|+|||+++. .|. .++|+|++
T Consensus 95 ~~~G~~----av~lt~~d~~~~------------------~~~~~~~~i~~lL~~g~ipVi~~~----~g~-~~~~~D~~ 147 (240)
T 4a7w_A 95 EHIGLD----TRVQSAIEIKEI------------------CESYIYRKAIRHLEKGRVVIFGAG----TGN-PFFTTDTA 147 (240)
T ss_dssp HHTTCC----EEEEESSCCTTT------------------SEECCHHHHHHHHHTTCEEEEEST----TSC-TTSCHHHH
T ss_pred HHCCCC----EEEecHHHcCcc------------------cCcCcHHHHHHHHHCCCEEEEeCC----CCC-CCCChHHH
Confidence 899998 889988775421 123588999999999999999982 232 36999999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 167 ATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.+. +
T Consensus 148 Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g----------------------------- 195 (240)
T 4a7w_A 148 ATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---D----------------------------- 195 (240)
T ss_dssp HHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---S-----------------------------
T ss_pred HHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---C-----------------------------
Confidence 99999999999999999999973 35788999998876432 1
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
.+ + | ++.+|..|+++|++ +||+|++.|++
T Consensus 196 --------------------------~~-~---------------------m--~~~a~~~a~~~gv~-v~I~~g~~~~~ 224 (240)
T 4a7w_A 196 --------------------------IE-V---------------------M--DDTAISLAKDNKLP-IVVCNMFKKGN 224 (240)
T ss_dssp --------------------------CC-S---------------------S--CHHHHHHHHHTTCC-EEEEESSSTTH
T ss_pred --------------------------cc-c---------------------c--HHHHHHHHHHCCCe-EEEECCCCccH
Confidence 11 2 5 47899999999997 99999999999
Q ss_pred eeehhhhcCCCcceee
Q 010815 320 LLLELFKRDGMGTMVA 335 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~ 335 (500)
++.+++++++.||+|+
T Consensus 225 l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 225 LLQVIKHQQGVFSMVK 240 (240)
T ss_dssp HHHHHHHSCSSCEEEC
T ss_pred HHHHHCCCCCCceeeC
Confidence 9989999889999984
|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=208.33 Aligned_cols=192 Identities=16% Similarity=0.063 Sum_probs=150.1
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEECChHHHHH---HHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCC
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP 82 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~---~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~ 82 (500)
-+.+++++|+.|+. |+++|||||||++++. +++++++ ++.+++...++.+.+|..+++.+.
T Consensus 18 ~~~~~~~~i~~l~~-g~~vvlV~ggG~~~~~~~~~~~~~g~-----------~~~~l~~~~~~~~~~~~~l~~~~~---- 81 (219)
T 2ij9_A 18 KIREFAKTIESVAQ-QNQVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIAATRLNAMLLISAI---- 81 (219)
T ss_dssp HHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHcC-CCEEEEEECcchHhcchHHHHHHcCC-----------CccchHHHHHHHHHHHHHHHHHHH----
Confidence 36789999999998 9999999999999999 5778876 346778876667888988877532
Q ss_pred chhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecC
Q 010815 83 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCN 162 (500)
Q Consensus 83 ~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~ 162 (500)
+. ++. . ..++.+.|+.+|+.|+|||++| |..++ |
T Consensus 82 ----~~-~~~----~------------------------------~~~~~~~i~~ll~~g~ipVi~~------g~~~~-~ 115 (219)
T 2ij9_A 82 ----PS-AAK----K------------------------------VPVDFMEAEELSKLYRVVVMGG------TFPGH-T 115 (219)
T ss_dssp ----TT-BCS----S------------------------------CCSSHHHHHHHHTTCSEEEECC------CSSSS-C
T ss_pred ----HH-hcC----C------------------------------CcCCHHHHHHHHHCCCEEEEeC------CCCCC-C
Confidence 11 111 0 1368899999999999999999 44556 9
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCcccC---C----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 163 TYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 163 ~D~~a~~lA~~l~Ad~li~lTdv~gv~---~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
+|++|+.+|.+|+||+|+|+|||||++ | ++++|++++.+|+++++...
T Consensus 116 ~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~------------------------- 170 (219)
T 2ij9_A 116 TDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS------------------------- 170 (219)
T ss_dssp THHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC--------------------------
T ss_pred chHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcC-------------------------
Confidence 999999999999999999999999983 3 58999999999988774220
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
++.+| | |..|..+|..++++++.++||+|+
T Consensus 171 ---------------------------g~~~g-~---------------------~~~~~~~a~~~~~~~~~~v~I~~g- 200 (219)
T 2ij9_A 171 ---------------------------SAKAG-T---------------------NVVIDLLAAKIIERSKIKTYVILG- 200 (219)
T ss_dssp -------------------------------C-C---------------------CCCSCHHHHHHHHHHTCCEEEEEC-
T ss_pred ---------------------------CCCCC-C---------------------ccchHHHHHHHHHHCCCeEEEEEC-
Confidence 01122 2 556666677777766667999999
Q ss_pred cCceeeehhhhcCCCcceee
Q 010815 316 IGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 316 ~~~~ll~~l~~~~~~GT~i~ 335 (500)
.|+++ .++|++++.||.|+
T Consensus 201 ~~~~l-~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 201 TPENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp CHHHH-HHHHTTCCCSEEEC
T ss_pred CHhHH-HHHHcCCCCCeEeC
Confidence 99976 68899888999984
|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-24 Score=209.01 Aligned_cols=202 Identities=14% Similarity=0.097 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH-HHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM-IEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~-i~~~l~~~~~~~ 84 (500)
+.+++++|+.|+..|+++|||||||+++... ++++++++. +.+...++...+|.. +++
T Consensus 32 ~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~-----------~~~~~~~~~~~~~~~ll~~--------- 91 (252)
T 1z9d_A 32 VQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRV-----------QADYTGMLGTVMNALVMAD--------- 91 (252)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHH-----------HHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCC-----------chHHHHHHHHHHHHHHHHH---------
Confidence 5689999999999999999999999875443 677777642 223334556677777 444
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|.++|++ +.++++.+...+. + ..++.+. ..||+.|+|||++|. .| ..++|+|
T Consensus 92 al~~~G~~----~~~~~~~~~~~~~----------~-------~~~~~~~-~~lL~~g~IpVi~~~----~g-~~~~~~D 144 (252)
T 1z9d_A 92 SLQHYGVD----TRVQTAIPMQNVA----------E-------PYIRGRA-LRHLEKNRIVVFGAG----IG-SPYFSTD 144 (252)
T ss_dssp HHHTTTCC----EEEEESSCBTTTB----------E-------ECCHHHH-HHHHHTTCEEEEEST----TS-CTTCCHH
T ss_pred HHHHcCCC----eEEEecccccccc----------C-------cchHHHH-HHHHhCCCEEEEeCC----cC-CCCCChH
Confidence 57888987 6777766533111 0 0235555 899999999999982 23 3489999
Q ss_pred HHHHHHHHHcCCCEEEEEe-cCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 165 EVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lT-dv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
++|+.+|.+|+||+|+|+| ||||++ |++++|++++.+|+.++ +
T Consensus 145 ~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---~-------------------------- 195 (252)
T 1z9d_A 145 TTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR---G-------------------------- 195 (252)
T ss_dssp HHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---T--------------------------
T ss_pred HHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---c--------------------------
Confidence 9999999999999999999 999983 35899999998876432 1
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
.+ + | |+.+|..|+++|++ ++|+|++.
T Consensus 196 -----------------------------~~-~---------------------m--k~~aa~~a~~~gv~-v~I~~g~~ 221 (252)
T 1z9d_A 196 -----------------------------LK-I---------------------M--DATASTLSMDNDID-LVVFNMNE 221 (252)
T ss_dssp -----------------------------CC-C---------------------S--CHHHHHHHHHTTCE-EEEEETTS
T ss_pred -----------------------------cc-c---------------------c--CHHHHHHHHHcCCe-EEEEeCCC
Confidence 11 2 7 78899999999997 99999999
Q ss_pred CceeeehhhhcCCCcceeecccc
Q 010815 317 GGVLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~~d~~ 339 (500)
|+.+ .+++++++.||+|.+++|
T Consensus 222 ~~~l-~~~l~g~~~GT~i~~~~~ 243 (252)
T 1z9d_A 222 AGNI-QRVVFGEHIGTTVSNKVC 243 (252)
T ss_dssp TTHH-HHHHTTCCCSEEEECC--
T ss_pred chHH-HHHHcCCCCceEEecCCC
Confidence 9976 788988889999998877
|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=214.46 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|+ .|+++|||||||++++.++. ++.+ .|+ ++..++.+.+..+.+|..+++.| +
T Consensus 58 l~~l~~~I~~l~-~G~~vVlV~GGg~~~~~~~~-~~~~----~gl---~~~~l~~v~~~~~~~n~~l~~~l--------l 120 (276)
T 2ogx_A 58 ILPLVEELRKLL-PEHRLLILTGAGVRARHVFS-VGLD----LGL---PVGSLAPLAASEAGQNGHILAAM--------L 120 (276)
T ss_dssp HHHHHHHHHHHT-TTCEEEEEECCTHHHHHHHH-HHHH----TTC---CHHHHHHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHh-CCCeEEEEECcHHHHHHHHh-ccCc----CCC---CHHHHHHHHHHHHHHHHHHHHHH--------H
Confidence 678999999998 89999999999999998776 4433 222 46678888666789999988853 4
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcc-cC--CC-CC-eeec
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG-YS--SS-GE-VLNC 161 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~-~~--~~-g~-~~~i 161 (500)
...|++ ++.++ .+.+.|+.+|++|+|||++++. .+ .. |. ..++
T Consensus 121 ~~~g~~----~v~~~----------------------------~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~ 168 (276)
T 2ogx_A 121 ASEGVS----YVEHP----------------------------TVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPH 168 (276)
T ss_dssp GGGTCC----BCCHH----------------------------HHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSS
T ss_pred HhcCCC----ccccc----------------------------ChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCC
Confidence 466765 32221 2678999999999999999953 33 22 33 4899
Q ss_pred CHHHHHHHHHHHcCCCEEEEEecCccc---CCC------CccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhccccccc
Q 010815 162 NTYEVATACALAIEADKLICIIDGPIL---DES------GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCF 232 (500)
Q Consensus 162 ~~D~~a~~lA~~l~Ad~li~lTdv~gv---~~~------g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
|+|.+|+.+|.+|+||+|+|+|||||+ ||+ +++|++++.+|++++. +
T Consensus 169 ~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~~e~~~~~--g---------------------- 224 (276)
T 2ogx_A 169 RADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSE--G---------------------- 224 (276)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEHHHHHTSC--S----------------------
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCHHHHHHHh--C----------------------
Confidence 999999999999999999999999998 333 8999999998766552 1
Q ss_pred CCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEee
Q 010815 233 GHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 312 (500)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (500)
+| | |.+|+.++..+++.|+ ++||+
T Consensus 225 ---------------------------------~g-g---------------------M~~K~~~~~~~~~~~~-~v~I~ 248 (276)
T 2ogx_A 225 ---------------------------------PL-P---------------------VDRALLDVMATARHIE-RVQVV 248 (276)
T ss_dssp ---------------------------------CC-S---------------------SCHHHHHHHHTCSSCC-EEEEE
T ss_pred ---------------------------------cC-C---------------------hHHHHHHHHHHhcCCC-eEEEE
Confidence 22 3 9999998888777766 69999
Q ss_pred ccccCceeeehhhhcCCCcceeecc
Q 010815 313 DGTIGGVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 313 ~~~~~~~ll~~l~~~~~~GT~i~~d 337 (500)
|++.|+++ .+++++++.||.|.++
T Consensus 249 ~g~~~~~l-~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 249 NGLVPGRL-TAALRGEHVGTLIRTG 272 (276)
T ss_dssp ETTSTTHH-HHHHTTCCCSEEEECS
T ss_pred ECCCccHH-HHHHcCCCCceEEccC
Confidence 99999986 5666778899999875
|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=202.84 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+..|+++|||||||++.... +.+++++.. +.+...++...+|..+... +
T Consensus 32 ~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~--------~ 92 (239)
T 1ybd_A 32 IVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRA-----------TADYMGMMATVMNALALKD--------A 92 (239)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSCHH-----------HHHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcCCCCc-----------cHHHHHHHHHHHHHHHHHH--------H
Confidence 6789999999999999999999999997766 678887642 2233444556677775332 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|.++|++ +..+++.+...+.. ..++.+.+ .+|+.|+|||++.. .| ..++|+|+
T Consensus 93 l~~~G~~----~~~~~~~~~~~~~~-----------------~~~~~~~~-~ll~~g~ipVv~g~----~g-~~~~~~D~ 145 (239)
T 1ybd_A 93 FETLGIK----ARVQSALSMQQIAE-----------------TYARPKAI-QYLEEGKVVIFAAG----TG-NPFFTTDT 145 (239)
T ss_dssp HHHTTCC----EEEEESSCBSSSCE-----------------ECCHHHHH-HHHHTTCEEEEEST----TS-STTCCHHH
T ss_pred HHHcCCC----eEEEeeeccccccc-----------------chhHHHHH-HHHhCCcEEEEECC----cc-CCCCCcHH
Confidence 7889987 66776655321110 12456777 89999999999832 22 23599999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 146 ~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~--------------------------- 195 (239)
T 1ybd_A 146 AAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NL--------------------------- 195 (239)
T ss_dssp HHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TC---------------------------
T ss_pred HHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cc---------------------------
Confidence 999999999999999999999983 35679999999887543 11
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
+ + | |+.+|..|+++|++ +||+|++.|+
T Consensus 196 ----------------------------~-~---------------------m--~~~a~~~a~~~gv~-v~I~~~~~~~ 222 (239)
T 1ybd_A 196 ----------------------------K-V---------------------M--DATAFALCRERKLN-IVVFGIAKEG 222 (239)
T ss_dssp ----------------------------C-S---------------------S--CHHHHHHHHHTTCC-EEEECTTSTT
T ss_pred ----------------------------c-c---------------------c--CHHHHHHHHHcCCc-EEEEeCCChh
Confidence 1 2 6 67799999999998 9999999999
Q ss_pred eeeehhhhcCCCcceeec
Q 010815 319 VLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~~ 336 (500)
.+ .+++++++.||.|.+
T Consensus 223 ~l-~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 223 SL-KRVITGEDEGTLVHC 239 (239)
T ss_dssp HH-HHHHHTCSCSEEEEC
T ss_pred HH-HHHHcCCCCCeEEcC
Confidence 86 588888889999964
|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=204.10 Aligned_cols=199 Identities=18% Similarity=0.129 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHH-HHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH-HHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM-IEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~-i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~-i~~~l~~~~~~~ 84 (500)
+.+++++|+.++..|+++|||||||+. .+..+.+++++. ...+..-++.+.+|.. +++
T Consensus 34 i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~-----------~~~d~~g~l~t~~N~~~l~~--------- 93 (243)
T 3ek6_A 34 INRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDR-----------VTGDHMGMLATVINALAMQD--------- 93 (243)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCH-----------HHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCC-----------CCHHHHHHHHHHHHHHHHHH---------
Confidence 678999999999999999999999874 344444455432 2223332345678887 444
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|++.|++ ++.+++.+.+.+ ...++.+.+..+|++|+|||+++. .|. .++|+|
T Consensus 94 al~~~G~~----a~~~~~~~~~~v------------------~~~~~~~~~~~lL~~g~IpVv~~~----~g~-~~~~~D 146 (243)
T 3ek6_A 94 ALEKLGAK----VRVMSAIKINDV------------------CEDFIRRRAIRHLEKGRIAIFAAG----TGN-PFFTTD 146 (243)
T ss_dssp HHHHTTCC----EEEEESSCBTTT------------------BEECCHHHHHHHHHTTCEEEEEST----TSS-TTCCHH
T ss_pred HHHHcCCC----eEEechhhcCcc------------------cCcCCHHHHHHHHHCCcEEEEECC----CCC-CcCChH
Confidence 67899988 788887653311 124578899999999999999983 232 359999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
++|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.+. +.
T Consensus 147 ~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-------------------------- 197 (243)
T 3ek6_A 147 SGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQ---GL-------------------------- 197 (243)
T ss_dssp HHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHHH---TC--------------------------
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHhC---Cc--------------------------
Confidence 9999999999999999999999983 35789999998876431 11
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
+ + | |+.+|..|+++|++ +||+|++.|
T Consensus 198 -----------------------------~-~---------------------~--~~~a~~~a~~~gv~-v~I~~g~~~ 223 (243)
T 3ek6_A 198 -----------------------------E-V---------------------M--DTAAFALARDSDLP-LRIFGMSEP 223 (243)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHTTCC-EEEECCCST
T ss_pred -----------------------------h-h---------------------H--HHHHHHHHHHCCCe-EEEEcCCCc
Confidence 0 1 4 58899999999997 999999999
Q ss_pred ceeeehhhhcCCCcceeec
Q 010815 318 GVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~~ 336 (500)
+++ .++|++++.||.|.+
T Consensus 224 ~~l-~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 224 GVL-LRILHGAQIGTLVQG 241 (243)
T ss_dssp THH-HHHHTTCCCSEEECC
T ss_pred cHH-HHHHCCCCCceEEee
Confidence 975 588988889999986
|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=205.42 Aligned_cols=197 Identities=11% Similarity=0.033 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHH-HHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMI-EAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i-~~~l~~~~~~~ 84 (500)
+.+++++|+.|+ .|+++|||||||+++... ++++++++.. .+...++...+|..+ ++
T Consensus 49 i~~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~~~~~g~~~~~-----------~~~~~~l~~~~n~~l~~~--------- 107 (256)
T 2va1_A 49 INDLAEQIEKIS-KKYIVSIVLGGGNIWRGSIAKELDMDRNL-----------ADNMGMMATIINGLALEN--------- 107 (256)
T ss_dssp HHHHHHHHHHHT-TTSEEEEEECCTTTCCHHHHHHTTCCHHH-----------HHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHh-CCCEEEEEECCcHHhccchHHHcCCCCCc-----------hhHHHHHHHHHHHHHHHH---------
Confidence 678999999999 999999999999997665 7788876431 223345556777777 44
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|.++|++ +++++..+...+ +.. .++.+. ..||+.|+|||++|. .|. .++|+|
T Consensus 108 ~l~~~Gi~----a~~~~~~t~~~~-----------~~~------~~~~~~-~~lL~~g~IpVi~~~----~g~-~~~~~D 160 (256)
T 2va1_A 108 ALNHLNVN----TIVLSAIKCDKL-----------VHE------SSANNI-KKAIEKEQVMIFVAG----TGF-PYFTTD 160 (256)
T ss_dssp HHHTTTCC----EEEEESSCCTTT-----------CEE------CCHHHH-HHHHHTTCEEEEEST----TSS-SSCCHH
T ss_pred HHHHcCCC----eEEEeeeecccc-----------cch------hhHHHH-HHHHhCCcEEEEECC----CCC-CCCChh
Confidence 57888987 666665542111 000 245555 789999999999982 233 358999
Q ss_pred HHHHHHHHHcCCCEEEEEec-CcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 165 EVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTd-v~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
++|+.+|.+|+||+|+|+|| |||++ |++++|++++.+|++++ +.
T Consensus 161 ~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~---~~------------------------- 212 (256)
T 2va1_A 161 SCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQ---NL------------------------- 212 (256)
T ss_dssp HHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHH---TC-------------------------
T ss_pred HHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHh---cc-------------------------
Confidence 99999999999999999999 99983 34899999999988766 11
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
| | | |+++|..|+++|++ ++|+|++.
T Consensus 213 ------------------------------~-~---------------------m--k~~aa~~a~~~gv~-v~I~~g~~ 237 (256)
T 2va1_A 213 ------------------------------K-V---------------------M--DATALALCQENNIN-LLVFNIDK 237 (256)
T ss_dssp ------------------------------C-S---------------------S--CHHHHHHHHHTTCE-EEEEESSS
T ss_pred ------------------------------C-C---------------------c--cHHHHHHHHHCCCe-EEEEeCCC
Confidence 1 2 7 89999999999997 99999999
Q ss_pred CceeeehhhhcCCCcceee
Q 010815 317 GGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~ 335 (500)
|+++ .+++++++.||.|.
T Consensus 238 ~~~l-~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 238 PNAI-VDVLEKKNKYTIVS 255 (256)
T ss_dssp TTHH-HHHHTTCSCEEEEE
T ss_pred chHH-HHHHcCCCCeEEEe
Confidence 9986 58888888999985
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-24 Score=209.11 Aligned_cols=199 Identities=16% Similarity=0.168 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.|+.. +++|||||||++.+. +.+++.+. | . +...+... +.+++..+..+.+ .
T Consensus 56 ~~~la~~I~~l~~~-~~vVlVhGGg~~~~~-~~~~~~~~----g--~-~~~~~~~~~~~a~G~~~l~~~~---------~ 117 (270)
T 2ogx_B 56 VYPLVDEIVAARKN-HKLLIGTGAGTRARH-LYSIAAGL----G--L-PAGVLAQLGSSVADQNAAMLGQ---------L 117 (270)
T ss_dssp HHHHHHHHHHHTTT-CEEEEEECCCHHHHH-HHHHHHHT----T--C-CHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHhcC-CcEEEEECChHHHHH-HHHHHHhc----C--C-ChHHHHHHHHHHHHHHHHHHHH---------H
Confidence 67899999999887 999999999997754 44444331 1 1 45556665 7778877777755 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcc-cC--C----CCCe
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG-YS--S----SGEV 158 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~-~~--~----~g~~ 158 (500)
|.++|++ . ++.+|.+.|+.+|++|+|||++|+. ++ . .|..
T Consensus 118 l~~~G~~----~-----------------------------vt~~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~ 164 (270)
T 2ogx_B 118 LAKHGIP----V-----------------------------VGGAGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVI 164 (270)
T ss_dssp HGGGTCC----B-----------------------------CCSSTTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSS
T ss_pred HHhcCCc----e-----------------------------ecHhhHHHHHHHHhCCCEEEEeCCccccccccccccccC
Confidence 5667764 0 2234666899999999999999872 22 1 2455
Q ss_pred eecCHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccc
Q 010815 159 LNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC 231 (500)
Q Consensus 159 ~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (500)
.++|+|++|+.+|.+|+||+|+|+|||||++ |++++|++++.+|++++...+.
T Consensus 165 ~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~g~-------------------- 224 (270)
T 2ogx_B 165 PPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIPRISVDEMKAKGLHDS-------------------- 224 (270)
T ss_dssp CSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEESEEEHHHHHHTTCCCT--------------------
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEcceeCHHHHHHHhcCCC--------------------
Confidence 6799999999999999999999999999983 3489999999988877742110
Q ss_pred cCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEe
Q 010815 232 FGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHL 311 (500)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 311 (500)
.++ || |.+|+++|. .++ ++||
T Consensus 225 -------------------------------~~~--------------gg---------m~~kl~aa~----~~~-~v~I 245 (270)
T 2ogx_B 225 -------------------------------ILE--------------FP---------VLDLLQSAQ----HVR-EVQV 245 (270)
T ss_dssp -------------------------------TSC--------------HH---------HHHHHHHCS----SCC-EEEE
T ss_pred -------------------------------ccc--------------HH---------HHHHHHHhh----cCC-cEEE
Confidence 011 12 999999874 345 7999
Q ss_pred eccccCceeeehhhhcCCCcceeec
Q 010815 312 LDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 312 ~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
+|++.|+++ .++|++++.||.|.+
T Consensus 246 ~~g~~~~~l-~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 246 VNGLVPGNL-TRALAGEHVGTIITA 269 (270)
T ss_dssp EETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred EeCCCchHH-HHHHcCCCCCeEecC
Confidence 999999976 789998899999975
|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=200.87 Aligned_cols=200 Identities=17% Similarity=0.083 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH-HHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM-IEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~-i~~~l~~~~~~~ 84 (500)
+.+++++|+.+...|+++|||||||++.... +.+++++.. +.+...++.+.+|.. +++
T Consensus 33 i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~-----------~~d~~~~~~~~~~~~ll~~--------- 92 (247)
T 2a1f_A 33 LDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRV-----------VGDHMGMLATVMNGLAMRD--------- 92 (247)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHH-----------HHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCC-----------cHHHHHHHHHHHHHHHHHH---------
Confidence 5689999999999999999999999986544 677776632 334445566677877 444
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
+|.++|++ +.++++.+...+ +.. .++.+ +..+|+.|+|||+++. .|. .++|+|
T Consensus 93 ~l~~~G~~----~~~~~~~~~~~~-----------~~~------~~~~~-~~~ll~~g~ipVi~~~----~g~-~~~~~D 145 (247)
T 2a1f_A 93 SLFRADVN----AKLMSAFQLNGI-----------CDT------YNWSE-AIKMLREKRVVIFSAG----TGN-PFFTTD 145 (247)
T ss_dssp HHHHTTCC----EEEEESSCCTTT-----------SEE------CCHHH-HHHHHHTTCEEEEEST----TSC-SSCCHH
T ss_pred HHHHcCCC----eEEecccccccc-----------cch------hhHHH-HHHHHhCCCEEEEeCC----cCC-CCCCcH
Confidence 67889987 677777654311 101 23444 4899999999999982 233 469999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
++|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 146 ~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~-------------------------- 196 (247)
T 2a1f_A 146 STACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---EL-------------------------- 196 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TC--------------------------
T ss_pred HHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---Cc--------------------------
Confidence 9999999999999999999999983 35899999999887653 11
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
+ + | |+.+|..|+++|++ ++|+|++.|
T Consensus 197 -----------------------------~-~---------------------m--~~~aa~~a~~~gv~-v~I~~~~~~ 222 (247)
T 2a1f_A 197 -----------------------------K-V---------------------M--DLSAFTLARDHGMP-IRVFNMGKP 222 (247)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHHTCC-EEEEETTST
T ss_pred -----------------------------c-c---------------------c--CHHHHHHHHHcCCc-EEEEeCCCc
Confidence 1 2 6 67799999999998 999999999
Q ss_pred ceeeehhhhcCCCcceeecc
Q 010815 318 GVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~~d 337 (500)
+.+ .+++.++..||.|...
T Consensus 223 ~~l-~~~l~g~~~GT~~~~~ 241 (247)
T 2a1f_A 223 GAL-RQVVTGTEEGTTICEG 241 (247)
T ss_dssp THH-HHHHTCSCSSEEECCC
T ss_pred hHH-HHHHcCCCCceEEeec
Confidence 975 6778888899999754
|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=208.75 Aligned_cols=177 Identities=20% Similarity=0.206 Sum_probs=120.8
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEEC-ChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCch
Q 010815 6 PWLVMVQDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 6 ~~~~i~~dIa~L~~~G~~~VIVHG-gG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
-+.+++++|+.++..|+++||||| +|++++.++...+.... ..+...++.+......+|..+...
T Consensus 18 ~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~------~~~~~~~d~~~a~Ge~~~~~ll~~-------- 83 (421)
T 3ab4_A 18 RIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNP------VPPAREMDMLLTAGERISNALVAM-------- 83 (421)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhcc------CCCHHHHHHHHHHHHHHHHHHHHH--------
Confidence 367899999999999999999996 78999988877643221 124677777764444577764443
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCc-ccCCC-CCeeec-
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSS-GEVLNC- 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~-~~~~~-g~~~~i- 161 (500)
+|+++|++ +.++++.+..+++.++. + .|++..++.+.|+.+|+.|.|||++|. +.+++ |++.++
T Consensus 84 ~L~~~G~~----a~~l~~~~~~~~t~~~~--------~-~~~v~~~~~~~i~~~l~~g~ipVv~g~~g~~~~~g~~~tlg 150 (421)
T 3ab4_A 84 AIESLGAE----AQSFTGSQAGVLTTERH--------G-NARIVDVTPGRVREALDEGKICIVAGFQGVNKETRDVTTLG 150 (421)
T ss_dssp HHHHTTCC----EEECCCC--------------------------CCHHHHHHHHHTTCEEEC-----------------
T ss_pred HHHHCCCC----eEEEehhhceEEeccCC--------C-CeeechhhHHHHHHHHhCCCEEEEeCCcCcCCCCCceEEeC
Confidence 67899998 88888888777766542 1 477888999999999999999999997 77888 888888
Q ss_pred --CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHh
Q 010815 162 --NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 209 (500)
Q Consensus 162 --~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~ 209 (500)
++|.+|+.+|.+|+||+|+|+|||||++ |++++|++++.+|+.++...
T Consensus 151 rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~ 207 (421)
T 3ab4_A 151 RGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAV 207 (421)
T ss_dssp -CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhc
Confidence 9999999999999999999999999983 36899999999999998643
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=197.60 Aligned_cols=199 Identities=15% Similarity=0.130 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHH-HHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLL-SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~-~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.++.+|+++|||||||+....+. .+++++ ....+...++...+|..+.+. +
T Consensus 74 i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~-----------~~~~d~~g~lat~~n~~~l~~--------~ 134 (281)
T 3nwy_A 74 VAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGME-----------RTRSDYMGMLGTVMNSLALQD--------F 134 (281)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCC-----------HHHHHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCC-----------ccchhHHHHHHHHHHHHHHHH--------H
Confidence 56899999999999999999999887654331 122322 222333334455667644432 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|+++|++ ++.+++.+...+. + ..++.+.+ .+|++|+|||+++. .|. .++|+|+
T Consensus 135 L~~~Gi~----a~~~~~~~~~~~~-~----------------~~~~~~~l-~lL~~g~IpVv~g~----~g~-~~~~~D~ 187 (281)
T 3nwy_A 135 LEKEGIV----TRVQTAITMGQVA-E----------------PYLPLRAV-RHLEKGRVVIFGAG----MGL-PYFSTDT 187 (281)
T ss_dssp HHHTTCC----EEEEESSCCGGGS-E----------------ECCHHHHH-HHHHTTCEEEEEST----TSS-TTCCHHH
T ss_pred HHHcCCC----EEEEecccccccc-c----------------ccchHHHH-HHHHcCCeEEEECC----CCC-CCCCHHH
Confidence 8899998 6666665543332 1 12456667 79999999999982 232 3599999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 166 VATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|+.+|.+|+||+|+|+|||||++ |++++|++++..|+.+ .
T Consensus 188 ~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~---~----------------------------- 235 (281)
T 3nwy_A 188 TAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD---R----------------------------- 235 (281)
T ss_dssp HHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT---T-----------------------------
T ss_pred HHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH---c-----------------------------
Confidence 999999999999999999999973 3578999999877521 1
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
| + |..|+.+|..|+++|++ ++|+|++.|+
T Consensus 236 ----------------------------g-~---------------------~v~k~~Aa~~a~~~Gi~-v~I~~g~~p~ 264 (281)
T 3nwy_A 236 ----------------------------G-L---------------------RVADATAFSLCMDNGMP-ILVFNLLTDG 264 (281)
T ss_dssp ----------------------------T-C---------------------CSSCHHHHHHHHTTTCC-EEEEETTSTT
T ss_pred ----------------------------C-C---------------------CcHHHHHHHHHHHCCCe-EEEecCCCch
Confidence 0 2 56689999999999997 9999999999
Q ss_pred eeeehhhhcCCCcceee
Q 010815 319 VLLLELFKRDGMGTMVA 335 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~ 335 (500)
+| .++++++..||.|.
T Consensus 265 ~l-~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 265 NI-ARAVRGEKIGTLVT 280 (281)
T ss_dssp HH-HHHHHTCCCSEEEC
T ss_pred HH-HHHHcCCCCceEEe
Confidence 75 58888888999985
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=171.01 Aligned_cols=149 Identities=35% Similarity=0.698 Sum_probs=136.0
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCc
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yR 417 (500)
++.+||+++++|++.+.+++.+.....+..+++.+.+...+..+++++.++++||++.+....+...++|..++|+|+||
T Consensus 2 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~~~V~p~~r 81 (150)
T 3e0k_A 2 NAEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYR 81 (150)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHTTCC-CCCHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEECGGGC
T ss_pred chheeecCCHhhHHHHHHHHHHHhhcccccccCHHHHHHHHHheEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHh
Confidence 35679999999999999999998888888899999999998899999999999999999877666789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEec
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkl 486 (500)
|+|+|+.|++++++++++.|++.+.+.+.++.+||+|+||+..+...+|...+..|++.+++++++|++
T Consensus 82 g~Gig~~Ll~~~~~~a~~~g~~~i~l~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~~~~~~v~~k~l 150 (150)
T 3e0k_A 82 DGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFYEVGVDYLPGAKQGLYNFQRKSKILALDL 150 (150)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCCEEECCCSSCHHHHHHHTCCCCCGGGSCGGGHHHHTC-CCCCCCCCCC
T ss_pred ccCHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHcCCeecCcccChHHHHhhcCcccCccchhccC
Confidence 999999999999999999999999998878999999999999999999999999999999999988764
|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-21 Score=187.10 Aligned_cols=199 Identities=17% Similarity=0.164 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHH-HHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHH-HHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM-IEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~-~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~-i~~~l~~~~~~~ 84 (500)
+.+++++|+.+...|+++|||||||+++... +++++++.. ..+...++...+|.. +++
T Consensus 37 i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~~~~~~g~~~~-----------~~~~~~~~~~~~~~~ll~~--------- 96 (255)
T 2jjx_A 37 LEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGIDRV-----------EADNIGTLGTIINSLMLRG--------- 96 (255)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHTTCCHH-----------HHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCeEEEEECchHHHhhhHHHHcCCCCC-----------ChHHHhHHHHHHHHHHHHH---------
Confidence 6789999999999999999999999986333 678887632 122223445567777 444
Q ss_pred hhhh-cCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCH
Q 010815 85 NIRR-HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 163 (500)
Q Consensus 85 ~l~~-~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~ 163 (500)
+|.+ +|++ +.++++.+...+. . .++...+..+|++|+|||++| + .|.. ++++
T Consensus 97 ~l~~~~Gi~----a~~l~~~~~~~v~----------------~--~~~~~~~~~lL~~g~IpVi~g-g---~g~~-~vtt 149 (255)
T 2jjx_A 97 VLTSKTNKE----VRVMTSIPFNAVA----------------E--PYIRLRAVHHLDNGYIVIFGG-G---NGQP-FVTT 149 (255)
T ss_dssp HHHHHCSSC----EEEEESSCCCSSS----------------E--ECCHHHHHHHHHTTCEEEEES-T---TSCS-SCCS
T ss_pred HHHhhcCCc----eEEecHHHcCccc----------------C--cccHHHHHHHHhCCcEEEEeC-C---CCCC-ccch
Confidence 5788 9988 6777776643211 0 234455559999999999998 2 3333 5889
Q ss_pred HHHHHHHHHHcCCCEEEEEe-cCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 164 YEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~lT-dv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
|.+|+.+|.+|+||+|+|+| ||||++ |++++|++++.+|+.++ +
T Consensus 150 D~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G------------------------- 201 (255)
T 2jjx_A 150 DYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---N------------------------- 201 (255)
T ss_dssp HHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---T-------------------------
T ss_pred HHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---C-------------------------
Confidence 99999999999999999999 999983 34899999998666543 1
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHH-HcCCCeEEeecc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDG 314 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~ 314 (500)
.| + |.+ +|..++ +.|++ ++|+|+
T Consensus 202 ------------------------------~~-~---------------------m~~---~a~~~a~~~gi~-v~I~~~ 225 (255)
T 2jjx_A 202 ------------------------------IQ-V---------------------MDQ---AALLLARDYNLP-AHVFNF 225 (255)
T ss_dssp ------------------------------CC-S---------------------SCH---HHHHHHHHHTCC-EEEEET
T ss_pred ------------------------------Cc-c---------------------CHH---HHHHHHHHcCCe-EEEEeC
Confidence 11 2 543 355544 58998 999999
Q ss_pred ccCceeeehhhhcCCCcceeecc
Q 010815 315 TIGGVLLLELFKRDGMGTMVASD 337 (500)
Q Consensus 315 ~~~~~ll~~l~~~~~~GT~i~~d 337 (500)
+.|+++ .+++++++.||.|.++
T Consensus 226 ~~~~~l-~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 226 DEPGVM-RRICLGEHVGTLINDD 247 (255)
T ss_dssp TSTTHH-HHHHBTCCCSEEEESS
T ss_pred CCchHH-HHHhcCCCCceEEecC
Confidence 999986 5566777899999874
|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=181.14 Aligned_cols=174 Identities=16% Similarity=0.163 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECC-hHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGg-G~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.+++++|+.++..|.++|||||| |...+.++.... ++.. | .+...++.+...-..+|..+.+. +
T Consensus 19 i~~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~---~~~~--~-~~~~~~d~l~s~Ge~~s~~l~~~--------~ 84 (600)
T 3l76_A 19 IQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQ---QISP--N-PCRREMDMLLSTGEQVSIALLSL--------A 84 (600)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHH---HHCS--S-CCHHHHHHHHHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHH---hhcc--C-CCHHHHHHHHHHhHHHHHHHHHH--------H
Confidence 568999999999999999999999 888777664211 0100 2 23555665444444588777664 6
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcC-cccCCCC--Ceeec-
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSG--EVLNC- 161 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~g--~~~~i- 161 (500)
|+++|++ ++++++.+..+++....+ .+++..++++.|+.+|+.|.|||+++ .+.+++| ...++
T Consensus 85 l~~~G~~----a~~l~~~~~~l~~~~~~~---------~~~~~~~~~~~i~~ll~~g~IpVv~Gf~g~~~~g~~~~~tlg 151 (600)
T 3l76_A 85 LQEIDQP----AISLTGAQVGIVTEAEHS---------RARILEIRPDRLEHHLREGKVVVVAGFQGISSVEHLEITTLG 151 (600)
T ss_dssp HHHTTCC----EEEEEGGGTEEEEC----------------CCEEEECCHHHHHTTTCEEEEECEEEC----CEEEECCC
T ss_pred HHhCCCC----eEEechhHcceEEecCCC---------CceeccccHHHHHHHHhCCCEEEEECCeecCCCCCEEEecCC
Confidence 8899998 899999887777643221 23566778899999999999999976 5667777 33333
Q ss_pred --CHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHH
Q 010815 162 --NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 207 (500)
Q Consensus 162 --~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~ 207 (500)
++|.+|+.+|.+|+||+|+++|||||++ |++++|++++.+|+.++.
T Consensus 152 rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela 206 (600)
T 3l76_A 152 RGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELA 206 (600)
T ss_dssp TTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTG
T ss_pred CCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHH
Confidence 4899999999999999999999999983 358999999999988875
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-16 Score=141.60 Aligned_cols=125 Identities=16% Similarity=0.185 Sum_probs=99.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCH-------------HHHHhhc----CcEEEEEECCeEEEEEEEeeecC-
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DSFYVVEREGQIIACAALFPFFK- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~-------------~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~- 401 (500)
+.||+++++|++.+.++....+...+....+. +.+...+ ..++++..++++||++.+.....
T Consensus 3 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~~ 82 (180)
T 1tiq_A 3 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 82 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred eEEEECCHHhHHHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCHHHHHHHHcCCCceEEEEEECCEEEEEEEEEeCCCc
Confidence 56999999999999999877655433222222 2222222 24678888999999999875432
Q ss_pred -----CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 402 -----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 402 -----~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
...++|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ .+|++||+|+||+..+...
T Consensus 83 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~g~~~ 154 (180)
T 1tiq_A 83 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHS 154 (180)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHcCCEEcCcEE
Confidence 35789999999999999999999999999999999999999988 5799999999999998653
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.9e-16 Score=141.19 Aligned_cols=147 Identities=18% Similarity=0.212 Sum_probs=114.9
Q ss_pred ccccccccCCcccHHHHHHHHHHHHH-----cCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVA 408 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~-----~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~ 408 (500)
.|.+.||+++++|++.+.+++..... .....+++.+.+...+ ..+++++.++++||++.+........++|.
T Consensus 22 mm~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~i~ 101 (182)
T 3kkw_A 22 HMQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALG 101 (182)
T ss_dssp -CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred CccEEEEeCCHHHHHHHHHHHHhHHHHhhhccccCCCCCHHHHHHHhcCCccEEEEEeCCeEEEEEEEEeecCCceEEEE
Confidence 34578999999999999999876422 1223456777776665 357888999999999999876666789999
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEE
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~ 483 (500)
.++|+|+|||+|+|+.|++++++++++. +++.+.+.+ ..+++||+|+||+..+...-.. .+....+.++|
T Consensus 102 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~-----~~g~~~~~~~m 176 (182)
T 3kkw_A 102 NMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHD-----PDGRRVALIQM 176 (182)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEC-----TTSCEEEEEEE
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeEeccccccc-----cCCcEEeEEEE
Confidence 9999999999999999999999999998 788988877 5789999999999988653210 11123346777
Q ss_pred EecCC
Q 010815 484 KKLLP 488 (500)
Q Consensus 484 kkll~ 488 (500)
.|.+.
T Consensus 177 ~k~L~ 181 (182)
T 3kkw_A 177 DKPLE 181 (182)
T ss_dssp EEECC
T ss_pred eeccC
Confidence 77663
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=138.40 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=96.3
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh----cCcEEEEEECCeEEEEEEEeeecC----------CCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFK----------EKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~----l~~~~v~~~dg~IVG~~~l~~~~~----------~~~~ 405 (500)
+.||+++++|++.+.++....+... ++.+.+... -..++++..++++||++.+....+ ...+
T Consensus 13 ~~iR~~~~~D~~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T 2x7b_A 13 FTLRNARMDDIDQIIKINRLTLPEN----YPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKG 88 (168)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCSCC----CCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHCCCC----ccHHHHHHHHhcCCceEEEEEECCeEEEEEEEEEeccccccccccCCCcEE
Confidence 5799999999999999976554333 233333222 235678888999999998875322 1267
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||+|+|+.|++++++++++. |++.|.+.+ ..|++||+|+||+..+..
T Consensus 89 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~ 151 (168)
T 2x7b_A 89 HVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVL 151 (168)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 8899999999999999999999999999998 999999987 579999999999998765
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=134.95 Aligned_cols=125 Identities=13% Similarity=0.102 Sum_probs=99.6
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcE-EEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSF-YVVEREGQIIACAALFPFFKEKCGEVAAIG 411 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~-~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~ 411 (500)
+|+..+|+++++|++.+.++..+.+..... +..+...... ..+ ++.+.++++||++.+.+. ....++|..++
T Consensus 2 ~M~~~ir~~~~~d~~~i~~l~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~ 78 (147)
T 3efa_A 2 NAMKIIFSASPANRAAAYALRQAVFVEERG--ISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQ-ADHVMRFGRVC 78 (147)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHTTTTTC--CCHHHHSCTTCSTTCCEEEEEEETTEEEEEEEEEEC-STTEEEEEEEE
T ss_pred chhHHhHcCCHhHHHHHHHHHHHHhhhccC--CCcHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEeC-CCCeEEEEEEE
Confidence 355679999999999999998876654322 2221111111 235 444589999999999854 45789999999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceec
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~ 464 (500)
|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+...
T Consensus 79 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~~~~~~ 132 (147)
T 3efa_A 79 TRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGPY 132 (147)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEECCC
T ss_pred EcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcccCCcc
Confidence 9999999999999999999999999999999988 5799999999999988653
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.5e-15 Score=130.82 Aligned_cols=143 Identities=21% Similarity=0.227 Sum_probs=103.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCc---CccCCHHHHHhhc----CcEEEEEE-CCeEEEEEEEeeecCCCeEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL----DSFYVVER-EGQIIACAALFPFFKEKCGEVAA 409 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~---~~~~s~~~~~~~l----~~~~v~~~-dg~IVG~~~l~~~~~~~~~~I~~ 409 (500)
|.++||+++++| +.+..++........ +...........+ ..++++.. ++++||++.+... ....++|..
T Consensus 2 ~~~~ir~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~i~~ 79 (162)
T 3lod_A 2 AMYTITDIAPTD-AEFIALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKR 79 (162)
T ss_dssp CCCEEEECCTTS-HHHHHHHHHHHHHTTCC---------GGGTSCGGGEEEEEEECSSCCEEEEEEEEEC-TTSEEEEEE
T ss_pred CceEEEECCCCC-HHHHHHHHHHHHhccccCChhHhhhhhHHhCCCCCcEEEEEECCCCCEEEEEEEEEc-CCCeEEEEE
Confidence 557899999999 777777765432211 1111111111111 34788888 8999999999854 567899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEe
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 485 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kk 485 (500)
++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+.... | ......++|.|
T Consensus 80 ~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~~~~-------~-~~~~~~~~m~k 151 (162)
T 3lod_A 80 VYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAP-------Y-QPDPLSVFMEK 151 (162)
T ss_dssp EEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECCCTT-------C-CCCSSEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEcccccc-------c-CCCCccEEEEE
Confidence 999999999999999999999999999999999987 46999999999999876421 1 12334677777
Q ss_pred cCCCC
Q 010815 486 LLPDT 490 (500)
Q Consensus 486 ll~~~ 490 (500)
.++..
T Consensus 152 ~l~~~ 156 (162)
T 3lod_A 152 PLFAD 156 (162)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 77543
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-15 Score=138.89 Aligned_cols=142 Identities=23% Similarity=0.291 Sum_probs=104.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcC---cCccCCHHHHHh----hc---------CcEEEEEECCeEEEEEEEeeec----
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLK----AL---------DSFYVVEREGQIIACAALFPFF---- 400 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~---~~~~~s~~~~~~----~l---------~~~~v~~~dg~IVG~~~l~~~~---- 400 (500)
.||+++++|++.|.+++...+... +....+.+.+.. .+ ..++|++.+++++|++.+.+..
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred ccccCChHHHHHHHHHHHHHHhhhHHHHhccCCHHHHHHHHHHHHhCCCCccccccEEEEEECCeEEEEEEEecCcHHHH
Confidence 499999999999999998866542 122233333221 11 2478889999999999875421
Q ss_pred --------------------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHH
Q 010815 401 --------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 450 (500)
Q Consensus 401 --------------------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~ 450 (500)
....++|..++|+|+|||+|||++||++++++|++.|++.+.+.+ ..|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~ 162 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 162 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred HHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHH
Confidence 124578999999999999999999999999999999999999988 47999
Q ss_pred HHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCCCCC
Q 010815 451 WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 492 (500)
Q Consensus 451 fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~~~~ 492 (500)
||+|+||+..+..... ......|.+.++++++
T Consensus 163 fY~k~GF~~~~~~~~~----------~~~~~~m~~~~~~~~~ 194 (199)
T 1u6m_A 163 LYASKGFKDVTTMTIS----------GHLYNHMQKEVEGGSH 194 (199)
T ss_dssp HHHTTTCEEEEEEEET----------TEEEEEEEEEC-----
T ss_pred HHHHCCCEEccEEEeC----------CceEEEEEEeccCCcc
Confidence 9999999998865322 1233566666665543
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.5e-15 Score=130.12 Aligned_cols=146 Identities=14% Similarity=0.210 Sum_probs=109.7
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHH------HHHhhc----CcEEEEEECCe-EEEEEEEeeecCCCeEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE------ELLKAL----DSFYVVEREGQ-IIACAALFPFFKEKCGE 406 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~------~~~~~l----~~~~v~~~dg~-IVG~~~l~~~~~~~~~~ 406 (500)
|.+.||+++++|.+.+.+++.......+...+... .+...+ ..++++..+++ +||++.+... .+..++
T Consensus 2 m~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~ 80 (163)
T 3d8p_A 2 MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRL-DNNMSA 80 (163)
T ss_dssp -CCEEEECCGGGHHHHHHHHHHHHHTTSCCSCCGGGCGGGGCHHHHTTTTTCEEEEEECTTCCEEEEEEEEEC-STTEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHHHHHhhCCCCccccchHHHHHHHHHhcCCceEEEEEeCCCeEEEEEEEEec-CCCEEE
Confidence 44679999999999999999887765554333221 232222 35777888888 9999998754 356789
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 482 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~ 482 (500)
+..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....+.. +........+
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~----~~~~~~~~~~ 156 (163)
T 3d8p_A 81 LKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSS----FPKLDVDNRF 156 (163)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEECGGGSCTT----SCCCC--CEE
T ss_pred EEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEeeeccchhh----ccccccceee
Confidence 999999999999999999999999999999999999988 47899999999999987655532 1122233455
Q ss_pred EEecCC
Q 010815 483 MKKLLP 488 (500)
Q Consensus 483 ~kkll~ 488 (500)
+.+.++
T Consensus 157 ~~~~l~ 162 (163)
T 3d8p_A 157 YYRNLK 162 (163)
T ss_dssp EEEECC
T ss_pred eehhcc
Confidence 555544
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-14 Score=128.22 Aligned_cols=142 Identities=20% Similarity=0.235 Sum_probs=111.7
Q ss_pred ccccCCcccHHHHHHHHHHHHHc-------CcC-ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVES-------GAL-VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 410 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~-------~~~-~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l 410 (500)
.||+++++|++.+.+++.+.... .+. ...+.+.+...+ ..++++..++++||++.+.........++..+
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (162)
T 2fia_A 2 KIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRF 81 (162)
T ss_dssp CEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEEE
T ss_pred cchhCCHhhHHHHHHHHHHHHHHHhccCcccCCCCCCCHHHHHHHHHhCcEEEEEECCEEEEEEEEeeCCCCCceEEEEE
Confidence 58999999999999999875432 111 223455555544 46788888999999999986655467889999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhccc-CCceEEEEe
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKK 485 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~-~~s~~~~kk 485 (500)
+|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+...... .. ....++|.+
T Consensus 82 ~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~-------~~~~~~~~~m~k 154 (162)
T 2fia_A 82 ATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQMN-------RLDFGSFYLYVK 154 (162)
T ss_dssp EECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCTT-------CGGGCCEEEEEE
T ss_pred EEcccccCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEeeEeecc-------ccCccceEEEEE
Confidence 99999999999999999999999999999999988 5799999999999988765431 11 345678888
Q ss_pred cCCC
Q 010815 486 LLPD 489 (500)
Q Consensus 486 ll~~ 489 (500)
.++.
T Consensus 155 ~l~~ 158 (162)
T 2fia_A 155 ELEN 158 (162)
T ss_dssp ECC-
T ss_pred EcCC
Confidence 7743
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.63 E-value=4e-15 Score=132.23 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=94.6
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHH----HHHhhc----CcEEEEEECCeEEEEEEEeeecC-----CC
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE----ELLKAL----DSFYVVEREGQIIACAALFPFFK-----EK 403 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~----~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~-----~~ 403 (500)
+|.+.||+++++|++.+.+++........ ..+.+ .+...+ ..+++++.++++||++.+..... ..
T Consensus 3 ~m~~~iR~~~~~D~~~i~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (150)
T 2dxq_A 3 SDAISLRAAGPGDLPGLLELYQVLNPSDP--ELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARP 80 (150)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHCTTSC--CCCHHHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHHHHCC
T ss_pred CCceEEEECChhhHHHHHHHHHHhccccc--cccHHHHHHHHHHHhcCCCceEEEEecCCEEEEEEEEEEecccccCCCc
Confidence 34467999999999999999876544322 12222 222211 24677788999999999875332 23
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeE
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 459 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~ 459 (500)
.++|..++|+|+|||||+|+.|++++++++++.|+.++.+.+ ..|++||+|+||+.
T Consensus 81 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~ 140 (150)
T 2dxq_A 81 YAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQ 140 (150)
T ss_dssp EEEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTCEE
T ss_pred eEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCCcc
Confidence 588999999999999999999999999999999999999988 57999999999993
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.6e-15 Score=134.93 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=102.1
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCH-------------HHHHhhc----Cc----EEEEEECCeEEEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DS----FYVVEREGQIIACAAL 396 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~-------------~~~~~~l----~~----~~v~~~dg~IVG~~~l 396 (500)
|.+.||+++++|++.+.+++...+...+....+. +.+...+ .. ++++..++++||++.+
T Consensus 25 m~i~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 104 (183)
T 3fix_A 25 MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIEL 104 (183)
T ss_dssp SCEEEEECCGGGHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCHHHHHHHHHHHHTTSSEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeCCHhhHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHhcChHHHHHHHccccccccceEEEEEeCCEEEEEEEE
Confidence 4578999999999999999887665543322222 2222222 23 8888999999999999
Q ss_pred eeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 397 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 397 ~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
... ...++|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 105 ~~~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 173 (183)
T 3fix_A 105 KII--ANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTD 173 (183)
T ss_dssp EEE--TTEEEEEEEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred EeC--CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEeccc
Confidence 865 57899999999999999999999999999999999999999988 579999999999998765
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=127.93 Aligned_cols=117 Identities=19% Similarity=0.302 Sum_probs=93.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCC--HHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 413 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s--~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~ 413 (500)
+.||+++++|++.+.+++... ....++. ...+...+ ..+++++.++++||++.+.. ....++|..++|+
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~--~~~~~~i~~l~V~ 78 (144)
T 2pdo_A 4 MEIRVFRQEDFEEVITLWERC---DLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGY--DGHRGSAYYLGVH 78 (144)
T ss_dssp EEEEECCGGGHHHHHHHHHHT---TCCBTTBCHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEE--CSSCEEEEEEEEC
T ss_pred eEEEECchhhHHHHHHHHhcc---cccCCccchHHHHHHHhhCCCccEEEEEcCCcEEEEEEeec--CCCceEEEEEEEC
Confidence 479999999999999997654 1222221 22333322 45788889999999998763 2356889999999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
|+|||+|+|+.|++++++++++.|+..+.+.+ ..+++||+|+||+..+
T Consensus 79 p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~~ 130 (144)
T 2pdo_A 79 PEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHAD 130 (144)
T ss_dssp GGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEECS
T ss_pred ccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCcccc
Confidence 99999999999999999999999999999877 5789999999999864
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.9e-15 Score=133.39 Aligned_cols=123 Identities=20% Similarity=0.229 Sum_probs=95.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCc-----cCC---HHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALV-----RRT---DEELLKAL----DSFYVVEREGQIIACAALFPFF------- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~-----~~s---~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~------- 400 (500)
++||+++++|++.+.+++...+...... .+. .+.+...+ ..++++++++++||++.+....
T Consensus 2 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~ 81 (153)
T 2q0y_A 2 MECRPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSH 81 (153)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCBTTB
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHHHHhcCCCeeEEEEEeCCeEEEEEEEEeeccCCCCCC
Confidence 3599999999999999988766543210 000 11111111 2467888899999999876421
Q ss_pred --CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 401 --KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 401 --~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
....++|..++|+|+|||+|+|+.||+++++++++.|++.+.+.+ ..+++||+|+||+..+.
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~A~~fY~k~GF~~~~~ 146 (153)
T 2q0y_A 82 PLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYARMGWSPTTE 146 (153)
T ss_dssp TTCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTTTHHHHHHTTCCCCCC
T ss_pred CCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCHHHHHHHHHcCCccchh
Confidence 123578999999999999999999999999999999999999988 57899999999998774
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=128.01 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=104.2
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCc-CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------------
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~------------- 400 (500)
.+.||+++++|++.+.+++...+.... ..+++.+.+...+ ..++++..++++||++.+....
T Consensus 5 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 84 (166)
T 1cjw_A 5 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 84 (166)
T ss_dssp SSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred ceeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEEEECCeEEEEEEeeeecccccccccccccc
Confidence 357999999999999999877654322 2355666665554 4578888999999999987642
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHhCCCeEeceecc
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~-~~a~~fYek~GF~~~~~~~l 465 (500)
....++|..++|+|+|||+|+|+.|++++++++++. |++.+.+.. ..+.+||+|+||+..+...+
T Consensus 85 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~~ 152 (166)
T 1cjw_A 85 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAI 152 (166)
T ss_dssp TTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEECSC
T ss_pred CCCCceEEEEEEECHhhccCChHHHHHHHHHHHHHHhcCcceEEEecCchHHHHHHHcCCeECCccce
Confidence 357789999999999999999999999999999995 999998866 57899999999999986533
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-14 Score=127.97 Aligned_cols=147 Identities=18% Similarity=0.129 Sum_probs=113.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC---CCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~---~~~~ 405 (500)
+.||+++++|++.+.+++...+..... .+.+.+.+..++ ..+++++.++++||++.+..... ....
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 83 (174)
T 3dr6_A 4 MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT 83 (174)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred eEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhcccCceEEEEecCCeEEEEEEEeecCCCCCcceE
Confidence 579999999999999999887665332 334555555443 35788899999999999975432 2357
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceE
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~ 481 (500)
++..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+...-.. ..+....+.+
T Consensus 84 ~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~~~----~~~g~~~~~~ 159 (174)
T 3dr6_A 84 VEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVG----VKFGRWLDLT 159 (174)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEE
T ss_pred EEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCEEEEEccceE----EECCeeEEEE
Confidence 8889999999999999999999999999999999999887 5789999999999987642110 0111224568
Q ss_pred EEEecCCCC
Q 010815 482 YMKKLLPDT 490 (500)
Q Consensus 482 ~~kkll~~~ 490 (500)
+|.+.+++.
T Consensus 160 ~m~~~l~~~ 168 (174)
T 3dr6_A 160 FMQLQLDEH 168 (174)
T ss_dssp EEEEECCCC
T ss_pred EEEeeccCc
Confidence 888888655
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-15 Score=130.44 Aligned_cols=125 Identities=18% Similarity=0.226 Sum_probs=103.0
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcC-----cCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 410 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~-----~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l 410 (500)
.+.||+++++|.+.+.+++....... ...+++.+.+...+ ..++++..++++||++.+........+++..+
T Consensus 2 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (160)
T 2i6c_A 2 QLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNM 81 (160)
T ss_dssp CCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEE
T ss_pred ceEeccCCHHHHHHHHHHHhhHHHHhccCccccCccCHHHHHHHhccCCceEEEEeCCeEEEEEEEEEEcCCCceEEEEE
Confidence 46799999999999999986643211 12345666666655 34667888999999999987666677999999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|+|+|||+|+|+.|++++++++++ .|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 82 ~v~p~~rg~Gig~~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 139 (160)
T 2i6c_A 82 MVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIA 139 (160)
T ss_dssp EECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEEcccc
Confidence 9999999999999999999999998 6999999987 578999999999998854
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=6.1e-15 Score=132.48 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=109.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCC--CeEEEEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKE--KCGEVAAIGV 412 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~--~~~~I~~l~V 412 (500)
+.++||+++++|++.+.+++...+. ..++.+.+...+ ..++++..++++||++.+...... ..++|..++|
T Consensus 5 ~~~~ir~~~~~D~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~v 80 (170)
T 2ob0_A 5 SRIELGDVTPHNIKQLKRLNQVIFP----VSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGC 80 (170)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHHCS----SCCCHHHHHHHTTSGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEEECCHhhHHHHHHHHHHHcc----cccCHHHHHHHhcCCCcEEEEEECCeEEEEEEEEEEecCCCcEEEEEEEEE
Confidence 4467999999999999999876543 334444454443 357888889999999998754322 4688999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
+|+|||+|+|+.|++++++++++. |++.+.+.+ ..+.+||+|+||+..+..... ..+....+.++|.+.+
T Consensus 81 ~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~-----~~~g~~~~~~~m~~~l 155 (170)
T 2ob0_A 81 LAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNY-----YKRIEPADAHVLQKNL 155 (170)
T ss_dssp CGGGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETTC-----CSSSSSCCEEEEEEEC
T ss_pred CHHHcCcCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEEeEeeecc-----ccCCCCCccEEEEEec
Confidence 999999999999999999999998 999999988 379999999999998765311 0012235678888877
Q ss_pred CCCCC
Q 010815 488 PDTSG 492 (500)
Q Consensus 488 ~~~~~ 492 (500)
+...+
T Consensus 156 ~~~~~ 160 (170)
T 2ob0_A 156 KVPSG 160 (170)
T ss_dssp -----
T ss_pred cCCcc
Confidence 66544
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-15 Score=132.41 Aligned_cols=123 Identities=18% Similarity=0.097 Sum_probs=98.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------CCCeEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEV 407 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~-------~~~~~~I 407 (500)
.++||+++.+|++.+.+++...+.. ......+.+...+ ..++++.+++++||++.+.... ....++|
T Consensus 21 ~~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i 98 (166)
T 4evy_A 21 GMNIKPASEASLKDWLELRNKLWSD--SEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYVNGTETSPVGFL 98 (166)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHSCC--CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEE
T ss_pred CcEEEECCHHHHHHHHHHHHHHhcC--CchHHHHHHHHHhcCCCceEEEEEECCeEEEEEEEEeecccccCCCCCCeEEE
Confidence 3569999999999999998765443 1111223343333 2478888899999999985431 1567899
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 99 ~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (166)
T 4evy_A 99 EGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQETEKV 158 (166)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEecceE
Confidence 99999999999999999999999999999999999988 469999999999998754
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=8.2e-16 Score=135.29 Aligned_cols=126 Identities=18% Similarity=0.222 Sum_probs=103.1
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh--------cCcEEEEEECCeEEEEEEEeeec--CCCeEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--------LDSFYVVEREGQIIACAALFPFF--KEKCGEV 407 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~--------l~~~~v~~~dg~IVG~~~l~~~~--~~~~~~I 407 (500)
|.++||+++++|.+.+.+++...+...+. ........+ -..++++..++++||++.+.... ....++|
T Consensus 2 M~~~ir~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~i 79 (150)
T 3gy9_A 2 MDVTIERVNDFDGYNWLPLLAKSSQEGFQ--LVERMLRNRREESFQEDGEAMFVALSTTNQVLACGGYMKQSGQARTGRI 79 (150)
T ss_dssp CCCEEEECSCGGGSCCHHHHHHHHHTTCC--HHHHHHHTTTTSCSCSTTCEEEEEECTTCCEEEEEEEEECTTSTTEEEE
T ss_pred CcEEEEECcccCHHHHHHHHHHHHHhccc--chHHHHHHHHHhhhcCCCcEEEEEEeCCeEEEEEEEEeccCCCCCeEEE
Confidence 44679999999999999999887777443 111122222 23578888999999999998543 5678999
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEeceeccc
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~~lp 466 (500)
..++|+|+|||+|+|+.|++++++++++ |+..+.+.+..+.+||+|+||+..+....+
T Consensus 80 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~~i~l~~~~a~~~y~k~GF~~~~~~~~~ 137 (150)
T 3gy9_A 80 RHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQGLGFQLVSGEKIT 137 (150)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHTT-TCSEEEECCSSCHHHHHHTTCEECCCSSCS
T ss_pred EEEEECHhhcCCCHHHHHHHHHHHHHHh-CCCEEEEechHHHHHHHHCCCEEeeeeeee
Confidence 9999999999999999999999999999 999999988779999999999998766444
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.6e-14 Score=130.87 Aligned_cols=147 Identities=15% Similarity=0.175 Sum_probs=111.8
Q ss_pred cccccccccCC--cccHHHHHHHHHHHHHcCcCccCCH------HHHHhhc----CcEEEEEECCeEEEEEEEeeecCCC
Q 010815 336 SDLYEGTRTAK--VTDLSGIKQIIQPLVESGALVRRTD------EELLKAL----DSFYVVEREGQIIACAALFPFFKEK 403 (500)
Q Consensus 336 ~d~~~~iR~a~--~~D~~~I~~L~~~~~~~~~~~~~s~------~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~ 403 (500)
+.+.++||+++ ++|++.+.+++.+.....+..++.. +.+...+ ..++++..++++||++.+... ...
T Consensus 16 ~~~~~~iR~~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~-~~~ 94 (181)
T 2q7b_A 16 YFQGMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI-DDK 94 (181)
T ss_dssp -CTTEEEEECCCCHHHHHHHHHHHHHHHHTTSCCCCCGGGGGGGGCHHHHTGGGTCEEEEEEETTEEEEEEEEEEC-SSS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCccccchHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc-CCC
Confidence 35556899999 9999999999987665544322221 1232322 357888889999999999854 346
Q ss_pred eEEEEEEEEccCCcC--CcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccC
Q 010815 404 CGEVAAIGVSPECRG--QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSR 477 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG--~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~ 477 (500)
.++|..++|+|+||| +|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+...++. .|....
T Consensus 95 ~~~i~~~~V~p~~rg~~~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~~~~ 170 (181)
T 2q7b_A 95 TAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDV----DYIFPD 170 (181)
T ss_dssp EEEEEEEEECGGGSSTTTCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEECTTTCCC----SCCCCS
T ss_pred EEEEEEEEEChhhcCccccHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCCEEeeeeeccc----cccCCC
Confidence 789999999999999 999999999999999999999999988 4689999999999998765432 122234
Q ss_pred CceEEEEecC
Q 010815 478 NSKYYMKKLL 487 (500)
Q Consensus 478 ~s~~~~kkll 487 (500)
...++|.+.+
T Consensus 171 ~~~~~~~~~L 180 (181)
T 2q7b_A 171 RDSRIYVKLL 180 (181)
T ss_dssp SSEEEEEEEC
T ss_pred cceeeEEEec
Confidence 4556666544
|
| >4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.60 E-value=9.2e-15 Score=133.30 Aligned_cols=124 Identities=22% Similarity=0.281 Sum_probs=95.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc----CccCCHHHHHh-hc--------CcEEEEEECCeEEEEEEEeeecC--CCe
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLK-AL--------DSFYVVEREGQIIACAALFPFFK--EKC 404 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~----~~~~s~~~~~~-~l--------~~~~v~~~dg~IVG~~~l~~~~~--~~~ 404 (500)
++||+++++|++.|.+++++...... ..+.+.+.... +. ..+++++.+|++||++.+.+... ...
T Consensus 9 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~~~~~ 88 (173)
T 4h89_A 9 LQVRDAEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPGPGAH 88 (173)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEEEecCCCCCce
Confidence 57999999999999999988655432 22334443332 22 13556677899999999976432 233
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----HHHHHHHHhCCCeEecee
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-----~~a~~fYek~GF~~~~~~ 463 (500)
..+..++|+|+|||||||+.|+++++++|++.|++.+.+.+ +.|++||+|+||+.++..
T Consensus 89 ~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G~~ 152 (173)
T 4h89_A 89 VASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIGTV 152 (173)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHCCCEEEEEE
Confidence 44558999999999999999999999999999999887642 579999999999998753
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=8.5e-15 Score=133.65 Aligned_cols=146 Identities=25% Similarity=0.353 Sum_probs=106.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc----CccCCHHHHHhhc------CcEEEEEEC-CeEEEEEEEeeecC----CCe
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK----EKC 404 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~----~~~~s~~~~~~~l------~~~~v~~~d-g~IVG~~~l~~~~~----~~~ 404 (500)
+.||+++++|++.+.+++.+...... ..+.+.+.+..++ ..+++++.+ +++||++.+..... ...
T Consensus 3 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 82 (175)
T 1vhs_A 3 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 82 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHHhcCCCceEEEEEcCCCcEEEEEEEeccCCCCccCCE
Confidence 57999999999999999987554321 1223333333322 246777777 99999999875432 234
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCce
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 480 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~ 480 (500)
.++ .++|+|+|||||+|+.|++.+++++++.|+++|.+.+ .+|++||+|+||+..+...-. . ..+....+.
T Consensus 83 ~e~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~GF~~~g~~~~~--~--~~~g~~~d~ 157 (175)
T 1vhs_A 83 AEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGI--A--EMDGKRYDL 157 (175)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE--E--EETTEEEEE
T ss_pred EEE-EEEEChhhcCCCHHHHHHHHHHHHHHhCCceEEEEEEecCCHHHHHHHHHCCCEEEeEcccc--e--eeCCEEEEE
Confidence 566 8999999999999999999999999999999999987 579999999999998754210 0 001122356
Q ss_pred EEEEecCCCC
Q 010815 481 YYMKKLLPDT 490 (500)
Q Consensus 481 ~~~kkll~~~ 490 (500)
++|.++++++
T Consensus 158 ~~m~~~~~~~ 167 (175)
T 1vhs_A 158 KILGRELSEG 167 (175)
T ss_dssp EEEEEECCC-
T ss_pred EEEEEECCCc
Confidence 7788877765
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=128.00 Aligned_cols=127 Identities=22% Similarity=0.224 Sum_probs=99.1
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCc---CccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec----CCC
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEK 403 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~---~~~~s~~~~~~~l------~~~~v~~~dg~IVG~~~l~~~~----~~~ 403 (500)
.|.+.||+++++|++.+.+++........ ...++.+.+...+ ..++++..++++||++.+.... ...
T Consensus 8 ~M~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 87 (166)
T 2fe7_A 8 HMTLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRN 87 (166)
T ss_dssp ---CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEE
T ss_pred cCceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEeCCeEEEEEEEEeccCCcccCC
Confidence 45578999999999999999887543221 2345666666654 2477888899999999987532 223
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 88 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 151 (166)
T 2fe7_A 88 GIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEW 151 (166)
T ss_dssp EEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred cEEEEEEEECccccCccHHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCCeEcccE
Confidence 578999999999999999999999999999999999999888 479999999999997643
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=9.8e-15 Score=129.28 Aligned_cols=127 Identities=19% Similarity=0.183 Sum_probs=101.6
Q ss_pred cccccCCcccHHHHHHHHHHHHHcC----------cCccCCHHHHHhhc----CcEEEEEECC-eEEEEEEEeeecC---
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESG----------ALVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPFFK--- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~----------~~~~~s~~~~~~~l----~~~~v~~~dg-~IVG~~~l~~~~~--- 401 (500)
++||+++.+|++.+.+++...+... ....++.+.+...+ ..++++..++ ++||++.+.....
T Consensus 1 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~~~~~~~ 80 (164)
T 4e0a_A 1 MIIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPLL 80 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEEEEECCC
T ss_pred CEEEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEecCCCCC
Confidence 3689999999999999998765321 02344555565554 3467777777 9999999975432
Q ss_pred -----CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 402 -----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 402 -----~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....+
T Consensus 81 ~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~ 154 (164)
T 4e0a_A 81 PTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTMEL 154 (164)
T ss_dssp SSBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccccCCcEEEEEEEEECHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceeccC
Confidence 23589999999999999999999999999999999999999987 479999999999998866443
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=130.31 Aligned_cols=124 Identities=25% Similarity=0.321 Sum_probs=94.1
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcC---cCccCCHHHHHhh-c-----CcEEEEEE--------CCeEEEEEEEeeec
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKA-L-----DSFYVVER--------EGQIIACAALFPFF 400 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~---~~~~~s~~~~~~~-l-----~~~~v~~~--------dg~IVG~~~l~~~~ 400 (500)
|.+.||+++++|++.+.+++.+..... ...+++.+.+... + ..+++++. ++++||++.+....
T Consensus 2 m~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ivG~~~~~~~~ 81 (170)
T 2bei_A 2 ASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIY 81 (170)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHhcCCCCcEEEEEEEeccccCCCCCCcEEEEEEEEeec
Confidence 446799999999999999987643211 1223455544332 1 13466666 78999999875322
Q ss_pred ---CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 401 ---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 401 ---~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
.....+|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ .+|++||+|+||+..+
T Consensus 82 ~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~~ 149 (170)
T 2bei_A 82 STWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLT 149 (170)
T ss_dssp ETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHH
T ss_pred cccCCCcEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHCCCEecc
Confidence 224578999999999999999999999999999999999999988 5799999999999864
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=131.55 Aligned_cols=123 Identities=21% Similarity=0.255 Sum_probs=92.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCc----cCCHHHHHhhc-CcEEEEE-ECCeEEEEEEEeee-c---CCCeEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL-DSFYVVE-REGQIIACAALFPF-F---KEKCGEVAA 409 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~----~~s~~~~~~~l-~~~~v~~-~dg~IVG~~~l~~~-~---~~~~~~I~~ 409 (500)
+.||+++++|++.+.+++...+...... ..+.+.+..++ ...+++. .++++||++.+... . ....+++ .
T Consensus 8 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~ 86 (166)
T 2ae6_A 8 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL-S 86 (166)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE-E
T ss_pred eEEEEcCHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHhccCeEEEEeeCCEEEEEEEEEeccccCCCceEEEE-E
Confidence 6799999999999999987644322211 11222334443 4445554 78999999998754 1 1245566 8
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++|+|+|||||+|+.|++++++++++.|++.+.+.+ ..|++||+|+||+..+..
T Consensus 87 l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~ 144 (166)
T 2ae6_A 87 IGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHF 144 (166)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEeeEE
Confidence 999999999999999999999999999999999988 479999999999998754
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=7.5e-15 Score=129.70 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=105.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHH-HhhcCcEEEEEECCeEEEEEEEeeec-CCCeEEEEEEEEccCCc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL-LKALDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 417 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~-~~~l~~~~v~~~dg~IVG~~~l~~~~-~~~~~~I~~l~V~p~yR 417 (500)
+.||+++++|++.+.+++...+............+ ...-..++++.+++++||++.+.... ....++|..++|+|+||
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~r 81 (157)
T 1mk4_A 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEECCHhHHHHHHHHHHHhccCcchhhHHHHHHHhccCCcEEEEEECCeEEEEEEEecCCCCCCeEEEEEEEECHHHc
Confidence 46899999999999999876544322211111112 12224577888899999999886433 35788999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchh--hhhhhcccCCceEEEEec
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE--RRKRINLSRNSKYYMKKL 486 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~--~~~~~~~~~~s~~~~kkl 486 (500)
|+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....... ....|.....+.++|.+.
T Consensus 82 g~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~g~~~~~~~~~~~~~~~~~~k~ 156 (157)
T 1mk4_A 82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVKN 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcCCcceecceeeecCCCCCCceeEEEEec
Confidence 9999999999999999999999999988 47899999999999884321111 011233334566666654
|
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.5e-15 Score=134.29 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=102.2
Q ss_pred cccccccccCCcccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhc----------CcEEEEEECCeEEEEEEEeeecC---
Q 010815 336 SDLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------DSFYVVEREGQIIACAALFPFFK--- 401 (500)
Q Consensus 336 ~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l----------~~~~v~~~dg~IVG~~~l~~~~~--- 401 (500)
.+|.+.||+++.+|++.+.+++.+.....+. ...+.+.+...+ ..++++..++++||++.+.....
T Consensus 20 ~~M~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~ 99 (183)
T 3i9s_A 20 QGMSVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPK 99 (183)
T ss_dssp ---CCEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEEEEESCCGG
T ss_pred cCCeeEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEEECCEEEEEEEEEEecCCCC
Confidence 3566789999999999999999876554432 234555544332 13788889999999999975432
Q ss_pred -CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 402 -EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 -~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 100 ~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (183)
T 3i9s_A 100 LSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREK 166 (183)
T ss_dssp GCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred CCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHcCCceeccc
Confidence 35789999999999999999999999999999999999998887 468999999999998743
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.9e-14 Score=127.52 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=100.6
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccC-------------CHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR-------------TDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 402 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-------------s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~ 402 (500)
|.++||+++++|++.+.+++...+...+.... +.+.+...+ ..+++++.++++||++.+.... .
T Consensus 4 m~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~ 82 (163)
T 3fnc_A 4 MDFHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQADKVIGFANFIELE-K 82 (163)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHHHHHHSCEEEEEETTEEEEEEEEEEEE-T
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHhcCCHHHHHHhccCCEEEEEEECCEEEEEEEEEeCC-C
Confidence 45689999999999999998876655443222 223333322 4588889999999999998654 6
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
..++|..++|+|+|||+|+|+.|+++++++++ ++..+.+.+ ..+.+||+|+||+..+...
T Consensus 83 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~Gf~~~~~~~ 146 (163)
T 3fnc_A 83 GKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFVNVEKGNETAIHFYKAKGFVQVEEFT 146 (163)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHTT--CCSSEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CcEEEEEEEECHHHhCCCHHHHHHHHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHcCCEEEEEEE
Confidence 78999999999999999999999999999997 788888887 5799999999999998753
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.6e-14 Score=127.80 Aligned_cols=147 Identities=19% Similarity=0.176 Sum_probs=104.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEE-EECCeEEEEEEEeeecC----C
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----E 402 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~-~~dg~IVG~~~l~~~~~----~ 402 (500)
.+.||+++++|++.+.+++......... .+.+.+....++ ..++++ +.++++||++.+..... .
T Consensus 2 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 81 (172)
T 2j8m_A 2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFR 81 (172)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGT
T ss_pred ceEEEECCHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHhhcccCceEEEEEcCCCeEEEEEEEecccCCcccC
Confidence 3579999999999999999876543221 223444432222 246666 66899999999875422 1
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCC
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRN 478 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~ 478 (500)
...++ .++|+|+|||||+|+.|+++++++|++.|+..+.+.+ ..|++||+|+||+..+...-... .+....
T Consensus 82 ~~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~----~~g~~~ 156 (172)
T 2j8m_A 82 GTVEH-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQ----KFGRWL 156 (172)
T ss_dssp TEEEE-EEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEEE----ETTEEE
T ss_pred ceEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCCEEEeeccccce----ecCEEe
Confidence 23444 7999999999999999999999999999999999987 47999999999999875421100 011123
Q ss_pred ceEEEEecCCCC
Q 010815 479 SKYYMKKLLPDT 490 (500)
Q Consensus 479 s~~~~kkll~~~ 490 (500)
+.++|.+.++..
T Consensus 157 d~~~m~~~~~~~ 168 (172)
T 2j8m_A 157 DLTFMQLNLDPT 168 (172)
T ss_dssp EEEEEEEESCTT
T ss_pred EHHHHHhhhccC
Confidence 457777777554
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6.2e-15 Score=131.21 Aligned_cols=124 Identities=21% Similarity=0.308 Sum_probs=99.6
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeec-----CC
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KE 402 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---------~~~~v~~~dg~IVG~~~l~~~~-----~~ 402 (500)
.+.+.||+++++|++.+.+++...... ..++.+.+...+ ..++++..++++||++.+.... ..
T Consensus 18 ~~~~~ir~~~~~D~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 94 (161)
T 3i3g_A 18 GVDLELRVLEESDLSSHLELLGHLTEA---PPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGR 94 (161)
T ss_dssp -CCEEEEECCGGGHHHHHHHHTTTSCC---CCCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGC
T ss_pred CccEEEEECcHhhHHHHHHHHHHhccC---CCCCHHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCc
Confidence 345689999999999999997654332 234544444432 2356667789999999997532 35
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 95 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 95 AVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQ 156 (161)
T ss_dssp CEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred cEEEEEEEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhcCCeecCce
Confidence 7889999999999999999999999999999999999999988 456899999999998764
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.2e-14 Score=127.40 Aligned_cols=143 Identities=17% Similarity=0.170 Sum_probs=111.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~---~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
++||+++++|++.+.+++...+ ..+++.+.+...+. .++++..++++||++.+.... ..+++..++|+|+|
T Consensus 2 i~ir~~~~~D~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~--~~~~i~~~~v~p~~ 75 (160)
T 2cnt_A 2 NTISILSTTDLPAAWQIEQRAH----AFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVVL--DEATLFNIAVDPDF 75 (160)
T ss_dssp EEEEECCGGGHHHHHHHHHHHC----SSCCCHHHHHHSCSTTBCCEEEEETTEEEEEEEEEEET--TEEEEEEEEECGGG
T ss_pred eEEEeCCHHHHHHHHHHHHhhc----ccCCCHHHHHHHhccCccEEEEEECCeEEEEEEEEecC--CceEEEEEEECHHH
Confidence 4799999999999999976543 34466677766652 467788899999999998543 57889999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCCCCC
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 492 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~~~~ 492 (500)
||+|+|+.|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...-..... ....+.++|.+...+...
T Consensus 76 rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~ 151 (160)
T 2cnt_A 76 QRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTA----QGHEDAIIMALPISMKLH 151 (160)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEET----TEEEEEEEEEEECCCCCC
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEEEeeeeecC----CCCccEEEEEeechhhhh
Confidence 99999999999999999999999999987 4789999999999987542110000 112355778777766543
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=127.90 Aligned_cols=124 Identities=15% Similarity=0.187 Sum_probs=92.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHH-c-Cc-CccCCHHH----HHhh----cCcEEEEEECCeEEEEEEEeeecC-----C
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVE-S-GA-LVRRTDEE----LLKA----LDSFYVVEREGQIIACAALFPFFK-----E 402 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~-~-~~-~~~~s~~~----~~~~----l~~~~v~~~dg~IVG~~~l~~~~~-----~ 402 (500)
.+.||+++++|++.+.+++..... . .. ......+. +... -..+++++.++++||++.+..... .
T Consensus 4 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~ 83 (153)
T 1z4e_A 4 HVTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGS 83 (153)
T ss_dssp CCEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHC
T ss_pred cEEEEECCHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHcCCCeeEEEEecCCcEEEEEEEEecCCcccCCc
Confidence 357999999999999999875111 0 01 11111111 1111 124677788999999998764321 2
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
..++|..++|+|+|||+|+|+.|+++++++|++.|+..+.+.+ ..+++||+|+||+..+.
T Consensus 84 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~ 147 (153)
T 1z4e_A 84 WRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 147 (153)
T ss_dssp EEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred cceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCceece
Confidence 4578999999999999999999999999999999999999888 46999999999998764
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.5e-14 Score=128.70 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=101.8
Q ss_pred ccccCCcccHHHHHHHH---HHHHHcCcCccCCHHHHHhhcC--cEEEE-EECCeEEEEEEEeeecCCCeEEEEEEEEcc
Q 010815 341 GTRTAKVTDLSGIKQII---QPLVESGALVRRTDEELLKALD--SFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVSP 414 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~---~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p 414 (500)
+||+++++|.+.+.++. ...+...+.. ...+.+...+. .++++ .+++++||++.+........++|..++|+|
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~l~V~p 80 (180)
T 1n71_A 2 IISEFDRNNPVLKDQLSDLLRLTWPEEYGD-SSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVES 80 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHCTTTSSS-THHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECT
T ss_pred EEEECCccCHHHHHHHHHHHHHhcccccch-hHHHHHHHHhCCCcEEEEEecCCeEEEEEEEeccCCCceEEEEEEEEcc
Confidence 58999999996555553 3333222221 22444554442 33344 557999999999866556788999999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcH-----------------------------HHHHHHHhCCCeEeceecc
Q 010815 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------------------------RTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~-----------------------------~a~~fYek~GF~~~~~~~l 465 (500)
+|||+|+|+.|++++++++++.|++.+.+.+. .+++||+|+||+..+....
T Consensus 81 ~~rg~GiG~~ll~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~~~~~~v~n~~~~a~~~y~k~GF~~~~~~~~ 160 (180)
T 1n71_A 81 SRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPN 160 (180)
T ss_dssp TSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEETT
T ss_pred ccccCCHHHHHHHHHHHHHHHCCCcEEEEEecCCcccccccccccccccchhhhhhcccchHHHHHHHHcCcEEEeeecc
Confidence 99999999999999999999999999999871 3699999999999876532
Q ss_pred chhhhhhhcccCCceEEEEecCC
Q 010815 466 PEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 466 p~~~~~~~~~~~~s~~~~kkll~ 488 (500)
. .......++|.+.+.
T Consensus 161 ~-------~~~~~~~~~m~k~l~ 176 (180)
T 1n71_A 161 A-------NGWDKPDIWMAKTII 176 (180)
T ss_dssp T-------TSTTCCEEEEEEECS
T ss_pred c-------CCCCCCcEEEEecCC
Confidence 1 112345677777664
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=128.88 Aligned_cols=141 Identities=21% Similarity=0.229 Sum_probs=106.2
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHH-------------HHhhc--CcEEEEEECCeEEEEEEEeeecCCC
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------------LLKAL--DSFYVVEREGQIIACAALFPFFKEK 403 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~-------------~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~ 403 (500)
.+.||+++++|++.+.+++.+.+........+.+. +...+ ..++++..++++||++.+. .
T Consensus 7 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~-----~ 81 (172)
T 2fiw_A 7 TPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLK-----G 81 (172)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEE-----T
T ss_pred CcEEEECchhhHHHHHHHHHHHHHHhccccCCHHHHHHHHhhccCHHHHHHHhcCCeEEEEEECCEEEEEEEEe-----c
Confidence 36799999999999999998766543332333222 22221 3578888899999999997 3
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEE
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 482 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~ 482 (500)
..++..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....+. +......+.
T Consensus 82 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~GF~~~~~~~~~~------~g~~~~~~~ 155 (172)
T 2fiw_A 82 PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSI------NGEWLANTT 155 (172)
T ss_dssp TTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEEE------TTEEEEEEE
T ss_pred CcEEEEEEECccccCcCHHHHHHHHHHHHHHhcCCcEEEEEeCHHHHHHHHHcCCEEecceeEeE------CCEEeeeEE
Confidence 457889999999999999999999999999999999999987 5789999999999987654331 112234577
Q ss_pred EEecCCCC
Q 010815 483 MKKLLPDT 490 (500)
Q Consensus 483 ~kkll~~~ 490 (500)
|.+.+++.
T Consensus 156 ~~~~l~~~ 163 (172)
T 2fiw_A 156 MTKSLADS 163 (172)
T ss_dssp EEEEC---
T ss_pred EEEecccc
Confidence 77777654
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.2e-14 Score=127.48 Aligned_cols=145 Identities=14% Similarity=0.237 Sum_probs=106.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC---CCe
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKC 404 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~---~~~ 404 (500)
.+.||+++++|++.+.+++.+....... ...+.+.+..++ ..++++..++++||++.+..... ...
T Consensus 7 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 86 (170)
T 2ge3_A 7 TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHC 86 (170)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTE
T ss_pred cEEEeeCCHHHHHHHHHHHHhhhhcccccccCCCCCHHHHHHHHHhhccCCceEEEEEECCEEEEEEEEecccccCCCce
Confidence 3579999999999999999876544322 223443333322 35677788999999999875432 245
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCce
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 480 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~ 480 (500)
+++ .++|+|+|||||+|+.|++.+++++++.|++++.+.+ .+|++||+|+||+..+...-.. ..+....+.
T Consensus 87 ~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~g~~~d~ 161 (170)
T 2ge3_A 87 GTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAV----SIDGHYIDS 161 (170)
T ss_dssp EEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEE----ESSSCEEEE
T ss_pred EEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCCCEEEeEecceE----eeCCEEeee
Confidence 666 8999999999999999999999999999999999988 4799999999999987542110 011112345
Q ss_pred EEEEecCC
Q 010815 481 YYMKKLLP 488 (500)
Q Consensus 481 ~~~kkll~ 488 (500)
++|.++++
T Consensus 162 ~~~~~~~~ 169 (170)
T 2ge3_A 162 LNMAIIFG 169 (170)
T ss_dssp EEEEEECC
T ss_pred eeEeehhc
Confidence 66766654
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.9e-14 Score=127.07 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=97.5
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC-------ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecC-
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK- 401 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~-------~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~~- 401 (500)
+.+.||+++++|++.+.+++......... .+++.+.....+ ..++++..++++||++.+.....
T Consensus 3 ~~l~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~ 82 (172)
T 2i79_A 3 YELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRK 82 (172)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHTTCSSSSCCTTCCCCCHHHHHHHHHHHHHCSSCEEEEEEETTEEEEEEEEECCCST
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHhhcCcccccCCccccCCHHHHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEEecCCC
Confidence 34579999999999999999876543211 123444433322 24677788999999999875432
Q ss_pred --CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 402 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 --~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g-~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
...+++ .++|+|+|||||+|+.|+++++++|++.+ +++|.+.+ .+|++||+|+||+..+..
T Consensus 83 ~~~~~~~~-~~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~yek~GF~~~g~~ 150 (172)
T 2i79_A 83 RVRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQ 150 (172)
T ss_dssp TTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeEE
Confidence 245566 69999999999999999999999999988 99999988 479999999999998754
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=126.07 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=97.4
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCC----HHHHHhhc-----CcEEEEEECCeEEEEEEEeeec----CCC
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT----DEELLKAL-----DSFYVVEREGQIIACAALFPFF----KEK 403 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s----~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~~----~~~ 403 (500)
.|.+.||+++++|++.+.++.............+ .+.+...+ ..+++++.++++||++.+.+.. ...
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 83 (157)
T 3dsb_A 4 EELIEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGN 83 (157)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCGGGCEEEEEEETTEEEEEEEEEEEEETTTTEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHhCcCcceEEEEEeCCcEEEEEEEEEeccccCCCc
Confidence 3556899999999999999877654321112222 22222211 3577788899999999996432 223
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g-~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
.+++..++|+|+|||+|+|+.|++++++++++.+ ++.+.+.+ ..+.+||+|+||+..+...
T Consensus 84 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~ 149 (157)
T 3dsb_A 84 FLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYNM 149 (157)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTTCEECSEEE
T ss_pred eEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCCCEEeccee
Confidence 4579999999999999999999999999999999 88888887 4799999999999987653
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.9e-14 Score=125.82 Aligned_cols=124 Identities=20% Similarity=0.268 Sum_probs=100.7
Q ss_pred cccccCCccc----HHHHHHHHHHHHHcC----cCccCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeec
Q 010815 340 EGTRTAKVTD----LSGIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 400 (500)
Q Consensus 340 ~~iR~a~~~D----~~~I~~L~~~~~~~~----~~~~~s~~~~~~~l-----------~~~~v~~~dg~IVG~~~l~~~~ 400 (500)
+.||+++++| ++.+.+++...+... +..+++.+.....+ ..++++..++++||++.+....
T Consensus 4 ~~ir~~~~~D~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~ 83 (177)
T 1ghe_A 4 AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQ 83 (177)
T ss_dssp CEEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEeCChHHhHhHHHHHHHHHHHHhhccCcccccCCCCHHHHHHHHHHHHHhhcCCceEEEEEecCCEEEEEEEEEecc
Confidence 5799999999 999999998876653 22344444333221 2477888899999999998643
Q ss_pred ---CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 401 ---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 ---~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
....++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 84 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~~~~~ 152 (177)
T 1ghe_A 84 KPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 152 (177)
T ss_dssp STTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred CCCCcceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHcCCEEcccc
Confidence 235799999999999999999999999999999999999999988 359999999999998764
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.58 E-value=6e-15 Score=130.13 Aligned_cols=127 Identities=21% Similarity=0.249 Sum_probs=100.3
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc-CccCC-HHH----HHhhc----CcEEEEEECCeEEEEEEEeee--------cC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRT-DEE----LLKAL----DSFYVVEREGQIIACAALFPF--------FK 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~-~~~~s-~~~----~~~~l----~~~~v~~~dg~IVG~~~l~~~--------~~ 401 (500)
++||+++.+|++.+.+++...+.... ..... .+. +...+ ..++++.+++++||++.+... ..
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 81 (157)
T 3mgd_A 2 MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKT 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEECCCBTTBTT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHHHHHHHhcCCceEEEEEEECCEEEEEEEEEeecCCCCccCcC
Confidence 57999999999999999988665442 21111 122 22222 246788889999999988743 12
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccc
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp 466 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....+
T Consensus 82 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~~~ 147 (157)
T 3mgd_A 82 GRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLEL 147 (157)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEEECCCTTHHHHHHHHTCCCCTTCCCC
T ss_pred CcEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCeecceEEEE
Confidence 45788999999999999999999999999999999999999988 678999999999999876544
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-13 Score=125.75 Aligned_cols=148 Identities=21% Similarity=0.156 Sum_probs=103.7
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC----CC
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK----EK 403 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~----~~ 403 (500)
.+.||+++++|++.+.+++.+....... .+.+.+....++ ..+++++.++++||++.+..... ..
T Consensus 4 ~i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~ 83 (175)
T 1yr0_A 4 SVELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRH 83 (175)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTT
T ss_pred EEEEecCCHhHHHHHHHHHHHHHhcCcccccccCCCHHHHHHHHHhhcccCceEEEEEeCCcEEEEEEEecccCccccCc
Confidence 3579999999999999999876543221 233444432222 34677778999999999875422 12
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCc
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 479 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s 479 (500)
..++ .++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ ..|++||+|+||+..+...-.. ..+....+
T Consensus 84 ~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~d 158 (175)
T 1yr0_A 84 TREH-SVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVG----TKFGRWLD 158 (175)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred eEEE-EEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCCCHHHHHHHHHCCCEEEEEccccc----ccCCEEEE
Confidence 3333 7999999999999999999999999999999999877 5799999999999987532110 01112234
Q ss_pred eEEEEecCCCCC
Q 010815 480 KYYMKKLLPDTS 491 (500)
Q Consensus 480 ~~~~kkll~~~~ 491 (500)
.++|.+++.++-
T Consensus 159 ~~~~~~~~~~~~ 170 (175)
T 1yr0_A 159 LTCMELKLGEGH 170 (175)
T ss_dssp EEEEEEEC----
T ss_pred HHHHHHHHhccc
Confidence 577777776653
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.8e-14 Score=126.48 Aligned_cols=124 Identities=18% Similarity=0.177 Sum_probs=97.9
Q ss_pred ccccccc-CCcccHHHHHHHHHHHHHcCcCcc---CCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeec-CCCeE
Q 010815 338 LYEGTRT-AKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCG 405 (500)
Q Consensus 338 ~~~~iR~-a~~~D~~~I~~L~~~~~~~~~~~~---~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~-~~~~~ 405 (500)
+.+.||+ ++++|++.+.+++.+. ..+... ++.+.+..++ ..+++++.++++||++.+.... ....+
T Consensus 18 ~~~~ir~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 95 (177)
T 2r7h_A 18 GAVAFRRQVLPQDALLVRRVVEST--GFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPATEGTY 95 (177)
T ss_dssp -CEEEECSCCTTHHHHHHHHHHHT--SCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTSSSEE
T ss_pred cceEEccCCCHHHHHHHHHHHHhh--CccCcchhhhHHHHHHHHHhhccCCCeEEEEEEECCeEEEEEEEEeccCCCCeE
Confidence 3467999 9999999999998763 112111 2233333333 1467788999999999998653 24678
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 96 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~ 159 (177)
T 2r7h_A 96 DLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVL 159 (177)
T ss_dssp EEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEECHHHhCCCHHHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCCEecccc
Confidence 9999999999999999999999999999999999999876 368999999999998764
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=125.75 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=89.8
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec----CCCeE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----KEKCG 405 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~----~~~~~ 405 (500)
+.+.||+++++|++.+.+++.+. . .+++.+.+...+ ..++++..++++||++.+.... ....+
T Consensus 7 ~~~~ir~~~~~D~~~i~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 81 (150)
T 3t9y_A 7 ITRLFNNSDFEKLNQLCKLYDDL---G--YPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYM 81 (150)
T ss_dssp EEEECCGGGGGCHHHHHHHHHHH---T--CCCCHHHHHHHHHHHHTSTTEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred hHHHHHhcCHHHHHHHHHHHHHh---C--CCCCHHHHHHHHHHhhcCCceEEEEEEECCEEEEEEEEEEeccccccCCEE
Confidence 45689999999999999998654 1 233444433322 2467888899999999987643 34678
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcH------HHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~------~a~~fYek~GF~~~~~~ 463 (500)
++..++|+|+|||+|+|+.|++++++++++.|++.+.+.+. .+.+||+|+||+..+..
T Consensus 82 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~~~~~~ 145 (150)
T 3t9y_A 82 RILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSG 145 (150)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSCEEECCCCCC------------CCCCCCCC
T ss_pred EEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCEEecce
Confidence 89999999999999999999999999999999999988873 58999999999998754
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=131.39 Aligned_cols=128 Identities=19% Similarity=0.312 Sum_probs=97.7
Q ss_pred ecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh----c-----CcEEEEEECCeEEEEEEEeee----cC
Q 010815 335 ASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L-----DSFYVVEREGQIIACAALFPF----FK 401 (500)
Q Consensus 335 ~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~----l-----~~~~v~~~dg~IVG~~~l~~~----~~ 401 (500)
...|.++||+++.+|++.+.+++........ ..++.+..... + ..+++++.++++||++.+... ..
T Consensus 19 ~~gm~~~ir~~~~~D~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~ 97 (176)
T 3fyn_A 19 FQGLSPQVRTAHIGDVPVLVRLMSEFYQEAG-FALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYG 97 (176)
T ss_dssp GGSSGGGEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHCGGGEEEEEEEETTEEEEEEEEEEEEETTTT
T ss_pred eecceEEEEECCHHHHHHHHHHHHHHHHhcC-CCcccHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEEEEeccccccC
Confidence 3456788999999999999999887655422 23333322221 1 357888899999999999753 22
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 98 ~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 163 (176)
T 3fyn_A 98 GLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFEESGRM 163 (176)
T ss_dssp EEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEECCCC--------HHHHTTCCCCCCC
T ss_pred CceEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCeeccce
Confidence 35788999999999999999999999999999999999999888 478999999999997654
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-14 Score=127.19 Aligned_cols=126 Identities=16% Similarity=0.070 Sum_probs=99.5
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeee-------cCCCeE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------FKEKCG 405 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~-------~~~~~~ 405 (500)
.+.+.||+++.+|++.+.+++...+...... ...+.+...+ ..++++..++++||++.+... .....+
T Consensus 18 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 1s3z_A 18 GSHMDIRQMNKTHLEHWRGLRKQLWPGHPDD-AHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVV 96 (165)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHSTTSCHH-HHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEE
T ss_pred CceEEEEeCchhhHHHHHHHHHHHhccCCcH-HHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccccCCCcE
Confidence 3446799999999999999987765433211 0112233333 347788899999999999862 124678
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 97 ~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (165)
T 1s3z_A 97 FLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 158 (165)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeEeeeE
Confidence 9999999999999999999999999999999999999988 478999999999998754
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.5e-14 Score=130.89 Aligned_cols=126 Identities=17% Similarity=0.132 Sum_probs=103.0
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCc-CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------------
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~------------- 400 (500)
.+.||+++.+|++.+.+++...+.... ..+++.+.+...+ ..++++.+++++||++.+....
T Consensus 34 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 113 (207)
T 1kux_A 34 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 113 (207)
T ss_dssp SCEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred CeEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEECCEEEEEEEEEeecccccccccccccC
Confidence 357999999999999999877544321 2345666665544 4588888999999999887533
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHhCCCeEeceec
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~-~~a~~fYek~GF~~~~~~~ 464 (500)
....++|..++|+|+|||+|||+.|++++++++++. |++.+.+.+ ..+++||+|+||+..+...
T Consensus 114 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~ 180 (207)
T 1kux_A 114 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCA 180 (207)
T ss_dssp TTCCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECGGGHHHHHTTTCEEEEECS
T ss_pred CCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEeecHHHHHHHHHCCCEECCccc
Confidence 246889999999999999999999999999999998 999998877 5789999999999998643
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.7e-14 Score=128.21 Aligned_cols=123 Identities=16% Similarity=0.194 Sum_probs=93.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCc-cCCHH---HHHhh-----cCcEEEEEECCeEEEEEEEeeec-----CCCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALV-RRTDE---ELLKA-----LDSFYVVEREGQIIACAALFPFF-----KEKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~-~~s~~---~~~~~-----l~~~~v~~~dg~IVG~~~l~~~~-----~~~~~ 405 (500)
+.||+++++|++.+.+++...+...... ..+.+ .+..+ -..++++..++++||++.+...+ ....+
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 86 (159)
T 1wwz_A 7 EKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVG 86 (159)
T ss_dssp EECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEE
T ss_pred hhhhhCCHhHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHhCCCCcEEEEEECCEEEEEEEEeccccccccCCceE
Confidence 5699999999999999986543221100 01111 11111 23578888999999999885321 11347
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||+|+|+.|++++++++++.| +.+.+.+ .+|++||+|+||+..+..
T Consensus 87 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~ 147 (159)
T 1wwz_A 87 AIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKS 147 (159)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEcccc
Confidence 89999999999999999999999999999999 9998877 579999999999998764
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.7e-14 Score=124.94 Aligned_cols=121 Identities=17% Similarity=0.181 Sum_probs=98.9
Q ss_pred cccc-cCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR-~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
+.+| +++++|++.+.+++.+ ...+..+.+.+.+...+ ..++++..++++||++.+.. .....++|..++|+|+|
T Consensus 5 ~~i~~~~~~~D~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 81 (142)
T 2ozh_A 5 VHVSTDNSLLDIGLIHRTLSQ--DTDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVIS-DYATFAYLGDVFVLPEH 81 (142)
T ss_dssp CEEECCGGGCCHHHHHHHHHH--HCSTTTTCCHHHHHHHHHTSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGG
T ss_pred EEecCCCchhhHHHHHHHHhh--ccccCCCCCHHHHHHHhccCcEEEEEECCEEEEEEEEEe-cCCCcEEEEEEEECHHH
Confidence 4565 6899999999999875 12233344555555544 45778888999999999985 33467899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEecee
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~ 463 (500)
||+|+|+.|++++++++++.|++.+.+.+..+.+||+|+||+..+..
T Consensus 82 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~a~~~y~k~GF~~~~~~ 128 (142)
T 2ozh_A 82 RGRGYSKALMDAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPPLFP 128 (142)
T ss_dssp TTSSHHHHHHHHHHHCGGGSSCSEEECCCSSCHHHHHTTTCCSCSSG
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEEecchHHHHHHHCCCEEcCCc
Confidence 99999999999999999999999999988788999999999988654
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=126.87 Aligned_cols=148 Identities=12% Similarity=0.074 Sum_probs=106.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc---C-ccCCHHHHHhhc-------CcEEEE-EECCeEEEEEEEeeecC----CC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----EK 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~---~-~~~s~~~~~~~l-------~~~~v~-~~dg~IVG~~~l~~~~~----~~ 403 (500)
+.||+++++|++.+.+++.+...... . .+.+.+....++ ..++++ +.++++||++.+..... ..
T Consensus 11 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~iiG~~~~~~~~~~~~~~~ 90 (182)
T 2jlm_A 11 RFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKY 90 (182)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHCSSSCCSSCCCHHHHHHHHHHHHHTTCCEEEEEETTSCEEEEEEEEESSSSGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhcceeeccCCCCCHHHHHHHHHhccccCceEEEEEccCCcEEEEEEecccCCcccccc
Confidence 56999999999999999887653321 1 234444433222 246666 66899999999875421 23
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCc
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 479 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s 479 (500)
.+++ .++|+|+|||||+|+.|++.+++++++.|+++|.+.+ ..|++||+|+||+..+...-.. ..+....+
T Consensus 91 ~~e~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF~~~g~~~~~~----~~~g~~~d 165 (182)
T 2jlm_A 91 TVEH-SVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAG----FKFGRWLD 165 (182)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred eeEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCCCHHHHHHHHHCCCcEEEEeeeee----eeCCEEEE
Confidence 4454 7999999999999999999999999999999999988 4799999999999987542110 00111234
Q ss_pred eEEEEecCCCCCC
Q 010815 480 KYYMKKLLPDTSG 492 (500)
Q Consensus 480 ~~~~kkll~~~~~ 492 (500)
.++|.+++++...
T Consensus 166 ~~~m~~~~~~~~~ 178 (182)
T 2jlm_A 166 AAFYQLTLDTPLH 178 (182)
T ss_dssp EEEEEEECSCCSS
T ss_pred eeeehhhhccCCC
Confidence 5778777766543
|
| >1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=126.23 Aligned_cols=125 Identities=16% Similarity=0.180 Sum_probs=97.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCC-HHHHHh-hcCcEEEEEECCeEEEEEEEeeecCC-CeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLK-ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s-~~~~~~-~l~~~~v~~~dg~IVG~~~l~~~~~~-~~~~I~~l~V~p~y 416 (500)
..+|+++++|++.+.++....+......+.. ...... ....++++..++++||++.+...... ..++|..++|+|+|
T Consensus 8 ~~ir~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~ 87 (150)
T 1xeb_A 8 KHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAA 87 (150)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGG
T ss_pred eeehhCCHHHHHHHHHHHHHHhhcccCCChhhhhhhhccCCcEEEEEEECCEEEEEEEEEccCCCCCeEEEEEEEECHHH
Confidence 4589999999999999988766554332211 011111 12346667789999999999864322 56899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHhCCCeEeceec
Q 010815 417 RGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~-~~a~~fYek~GF~~~~~~~ 464 (500)
||+|+|+.|++++++++++. |+..+.+.+ ..+.+||+|+||+..+...
T Consensus 88 rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~Gf~~~~~~~ 137 (150)
T 1xeb_A 88 RGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVY 137 (150)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCCE
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCEEEEechhHHHHHHHHcCCEECCccc
Confidence 99999999999999999998 999999888 5789999999999987543
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.7e-14 Score=122.76 Aligned_cols=133 Identities=20% Similarity=0.198 Sum_probs=102.0
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 420 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~G 420 (500)
.+|+++++|++.+.+++.......+....... ..-..+++++.++++||++.+.... ...++..++|+|+|||+|
T Consensus 5 i~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~vG~~~~~~~~--~~~~i~~~~v~~~~rg~G 79 (140)
T 1y9w_A 5 HIENGTRIEGEYIKNKVIQYNMSILTDEVKQP---MEEVSLVVKNEEGKIFGGVTGTMYF--YHLHIDFLWVDESVRHDG 79 (140)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHTSCGGGCCC---CEEEEEEEECTTCCEEEEEEEEEET--TEEEEEEEEECGGGTTTT
T ss_pred EeccCCHHHHHHHHHHHHHhhhccCchhhhhh---ccceEEEEECCCCeEEEEEEEEEec--CEEEEEEEEEcHHHcCCC
Confidence 35788999999999999876555443222110 0112466667789999999998553 578999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEec
Q 010815 421 QGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486 (500)
Q Consensus 421 iG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkl 486 (500)
+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+...- |... .+.++|.|.
T Consensus 80 ig~~ll~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~-------~~~~-~~~~~m~k~ 139 (140)
T 1y9w_A 80 YGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------HPKG-HSQHFFEKR 139 (140)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------CSTT-CCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC-------ccCC-ceeEEEEec
Confidence 9999999999999999999999888 46899999999999876521 1112 266777764
|
| >4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-13 Score=126.86 Aligned_cols=128 Identities=18% Similarity=0.211 Sum_probs=98.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc-------CccCC-HH---HHHhhc--CcEEEEEE--CCeEEEEEEEeeec----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA-------LVRRT-DE---ELLKAL--DSFYVVER--EGQIIACAALFPFF---- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~-------~~~~s-~~---~~~~~l--~~~~v~~~--dg~IVG~~~l~~~~---- 400 (500)
++||+++++|++.+.+++.+.+.... ..... .. .+...+ ..++++.+ +|++||++.+....
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~~~~~~ 86 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPIQPGDP 86 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEECTTHH
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeeccCccch
Confidence 58999999999999999987632211 11111 11 122223 35677777 89999999875431
Q ss_pred ------------------------------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 010815 401 ------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 444 (500)
Q Consensus 401 ------------------------------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~ 444 (500)
.+..++|..++|+|+|||+|||+.|++++++++++.|+..+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~~~ 166 (217)
T 4fd4_A 87 DAMVEEAATTETKKWGDILKLLALLERTADVCGRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGD 166 (217)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCHHHHHTCSCEEEEEEEEECTTSCSSCHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhhhhhcChhHHHHHHHHHHHHhcccHHHHcCCCceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 34567899999999999999999999999999999999999986
Q ss_pred c--HHHHHHHHhCCCeEeceeccch
Q 010815 445 T--TRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 445 ~--~~a~~fYek~GF~~~~~~~lp~ 467 (500)
+ ..+++||+|+||+..+...+..
T Consensus 167 ~~n~~a~~~Y~k~GF~~~~~~~~~~ 191 (217)
T 4fd4_A 167 FTSVFSVKLAEKLGMECISQLALGD 191 (217)
T ss_dssp ECSHHHHHHHHHTTCEEEEEEEGGG
T ss_pred eCCHHHHHHHHHCCCeEEEeEeHHH
Confidence 6 6799999999999998765543
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=125.70 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=97.4
Q ss_pred cccccccCCcccHHHHHHHHHHHHHc---CcCccCCHHHHHhhcC-----cEEEEE--ECCeEEEEEEEeee----cCCC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKALD-----SFYVVE--REGQIIACAALFPF----FKEK 403 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~---~~~~~~s~~~~~~~l~-----~~~v~~--~dg~IVG~~~l~~~----~~~~ 403 (500)
+.+.||+++++|++.+.+++...... .+..+++.+.+...+. .+++++ .++++||++.+... ....
T Consensus 3 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (152)
T 1qsm_A 3 DNITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKD 82 (152)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSC
T ss_pred ccEEEEEcchhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHhcCCCceeEEEEEeCCCCeEEEEEEEEecCCcccccc
Confidence 34679999999999999998753222 1222223334444431 367777 78999999998643 2346
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
.++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+....
T Consensus 83 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 145 (152)
T 1qsm_A 83 KIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAPKI 145 (152)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECSEE
T ss_pred ceEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCCccce
Confidence 789999999999999999999999999999999999998877 47899999999997543
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.2e-14 Score=125.36 Aligned_cols=121 Identities=21% Similarity=0.350 Sum_probs=97.4
Q ss_pred cccccCCcccHH-HHHHHHHHHHHcCcCccCCHHHHHhhc---------CcEEEEEE--CCeEEEEEEEeeec-----CC
Q 010815 340 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 402 (500)
Q Consensus 340 ~~iR~a~~~D~~-~I~~L~~~~~~~~~~~~~s~~~~~~~l---------~~~~v~~~--dg~IVG~~~l~~~~-----~~ 402 (500)
+.||+++++|++ .+.+++...... .+++.+.+...+ ..++++++ ++++||++.+.... ..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 81 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLTVT---GSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCG 81 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEEecCchhhHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEeccccCCCCC
Confidence 579999999999 999997653222 245555555522 23556677 79999999998632 34
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++++++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 82 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 143 (149)
T 3t90_A 82 KAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCGMSNKSIQ 143 (149)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEECCCCGGGHHHHHTTTCCCCCCC
T ss_pred CceEEEEEEECHHHhCCcHHHHHHHHHHHHHHHCCCeEEEEeccccHHHHHHHCCCeeccce
Confidence 6789999999999999999999999999999999999999988 456799999999998754
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.6e-14 Score=123.21 Aligned_cols=122 Identities=22% Similarity=0.204 Sum_probs=95.7
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHH----HHhhc----CcEEEEEE--CCeEEEEEEEeeecC----CCeEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVER--EGQIIACAALFPFFK----EKCGE 406 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~----~~~~l----~~~~v~~~--dg~IVG~~~l~~~~~----~~~~~ 406 (500)
.||+++++|++.+.+++...... +....+.+. +...+ ..++++.+ ++++||++.+..... ...++
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~~ 80 (153)
T 2eui_A 2 RIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWI 80 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEE
T ss_pred eeEeCCHhhHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCCCeEEEEEecCCCcEEEEEEEEecCCCCccCceEE
Confidence 58999999999999998754322 222223222 22222 34778888 899999999975422 35688
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 141 (153)
T 2eui_A 81 LNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEF 141 (153)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCSB
T ss_pred EEEEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCEEeccc
Confidence 999999999999999999999999999999999999888 479999999999987643
|
| >3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.53 E-value=4e-14 Score=128.66 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=100.8
Q ss_pred cccccccCCcccHHHHHHHHHHHH------HcCcCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeecCC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLV------ESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFKE 402 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~------~~~~~~~~s~~~~~~~l---------~~~~v~~~dg~IVG~~~l~~~~~~ 402 (500)
+.+.||+++++|++.+.+++.+.. ......+.+.+.+...+ ..++++..++++||++.+......
T Consensus 12 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~ 91 (188)
T 3owc_A 12 PELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRN 91 (188)
T ss_dssp -CEEEEECCGGGHHHHHTTCCSHHHHHHHHCTTCCSSCCGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEEEETTT
T ss_pred CeEEEEECcHHHHHHHHHHHhChHHHhhhcCccccCcccHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEEecCCC
Confidence 346799999999999999875431 12223333433333322 347788889999999999976567
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++.+++++++ .|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 92 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 157 (188)
T 3owc_A 92 GVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLR 157 (188)
T ss_dssp TEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEEEEcHHHhCCChhHHHHHHHHHHHHHhhCceEEEEEEecCCHHHHHHHHHcCCEEeeeE
Confidence 899999999999999999999999999999999 4999999988 579999999999998754
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.1e-13 Score=121.38 Aligned_cols=126 Identities=19% Similarity=0.223 Sum_probs=98.8
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCcc--------CC----HHHHHhhc---C---cEEEEE-ECCeEEEEEEEeeec
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVR--------RT----DEELLKAL---D---SFYVVE-REGQIIACAALFPFF 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~--------~s----~~~~~~~l---~---~~~v~~-~dg~IVG~~~l~~~~ 400 (500)
+.||+++.+|++.+.+++.+.+...+... .+ .+.+...+ . .++++. .++++||++.+....
T Consensus 1 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~ 80 (174)
T 2cy2_A 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CceeecCHhHHHHHHHHHHHHHHHhhcCcCCHHHHhhhhhhhhHHHHHHHHcCCCcCceEEEEEecCCEEEEEEEEecCC
Confidence 36899999999999999987655433211 11 11222222 2 366665 789999999998654
Q ss_pred C----CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 401 K----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 401 ~----~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
. ...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+....
T Consensus 81 ~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 153 (174)
T 2cy2_A 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREI 153 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCCCCceEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCCeeeceEEE
Confidence 1 36789999999999999999999999999999999999999987 57899999999999986543
|
| >2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-13 Score=121.17 Aligned_cols=135 Identities=16% Similarity=0.153 Sum_probs=99.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHh---hcCcEEEEEECCeEEEEEEEeeecC-----CCeEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---ALDSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIG 411 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~---~l~~~~v~~~dg~IVG~~~l~~~~~-----~~~~~I~~l~ 411 (500)
++||+++++|+..+.+.. +......+ ...+.. .-..++++..++++||++.+..... ...++|..++
T Consensus 2 ~~ir~~~~~D~~~l~~~~---~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~ 76 (146)
T 2jdc_A 2 IEVKPINAEDTYELRHRI---LRPNQPIE--ACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMA 76 (146)
T ss_dssp CEEEEECGGGGHHHHHHH---TCTTSCGG--GGSCGGGGSTTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHh---cccCCCcc--hhhhhcccCCceEEEEEecCCEEEEEEEEecccccccCCCceEEEEEEE
Confidence 469999999988876652 11111111 011111 1235778888999999999986432 2378999999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
|+|+|||+|+|+.|++++++++++.|++.+.+.+ +.+.+||+|+||+..+....+. ...+.++|+|.+
T Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~~~~~~~~~--------~~~~~~~m~k~l 145 (146)
T 2jdc_A 77 TLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEVFDTP--------PVGPHILMYKRI 145 (146)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEEEECT--------TSCEEEEEEEEC
T ss_pred ECHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEccccHHHHHHHcCCEEecccccCC--------CCCCeEEEEEec
Confidence 9999999999999999999999999999999988 5789999999999987653221 111567777654
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=120.12 Aligned_cols=116 Identities=20% Similarity=0.278 Sum_probs=94.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yR 417 (500)
++||+++++|++.+.+++...+.. +++.+.+...+ ..++++..++++||++.+... .....++..++|+|+||
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 77 (143)
T 3bln_A 3 KNVTKASIDDLDSIVHIDIDVIGN----DSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTN-FFDCTFLSLIIVSPTKR 77 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHSS----STTHHHHHHHHHTTCEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEECTTCC
T ss_pred eeEEECCHhhHHHHHHHHHHccCc----hhHHHHHHHHhCCCeEEEEEeCCeEEEEEEEEec-CCCceEEEEEEECHHHc
Confidence 579999999999999998765543 34444444433 467888889999999999854 34678899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|+|+|+.|++++++++++.+ +.+.+ ..+.+||+|+||+..+..
T Consensus 78 g~Gig~~ll~~~~~~~~~~~---i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (143)
T 3bln_A 78 RRGYASSLLSYMLSHSPTQK---IFSSTNESNESMQKVFNANGFIRSGIV 124 (143)
T ss_dssp SSCHHHHHHHHHHHHCSSSE---EEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCChHHHHHHHHHHHHhhCC---eEEEEcccCHHHHHHHHHCCCeEeeEE
Confidence 99999999999999998765 44444 579999999999998765
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=9e-14 Score=123.89 Aligned_cols=124 Identities=21% Similarity=0.259 Sum_probs=98.6
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCC--------HHHHHhhc----CcEEEEEEC-CeEEEEEEEeeec----CC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--------DEELLKAL----DSFYVVERE-GQIIACAALFPFF----KE 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s--------~~~~~~~l----~~~~v~~~d-g~IVG~~~l~~~~----~~ 402 (500)
..||+++++|++.+.+++..........++. .+.+...+ ..++++.++ +++||++.+.... ..
T Consensus 10 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 89 (158)
T 1vkc_A 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYV 89 (158)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCS
T ss_pred ceeccCCHHHHHHHHHHHHhhhHHhhcCCCCchhhhhhHHHHHHHHhcCCCcEEEEEEcCCCcEEEEEEEEEeccccCCC
Confidence 3699999999999999998765443333333 22222222 236778888 9999999998643 34
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 90 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~GF~~~~~~ 153 (158)
T 1vkc_A 90 KIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALI 153 (158)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCC
T ss_pred CEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCCcHHHHHHHCCCEeeEEE
Confidence 6789999999999999999999999999999999999999976 268999999999987654
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-13 Score=122.52 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=96.7
Q ss_pred ccccccCCcccHHHHHHHHHHHHHc---CcCccC-------CHHHHHhhc--CcEEEEE-ECCeEEEEEEEeeec-----
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVES---GALVRR-------TDEELLKAL--DSFYVVE-REGQIIACAALFPFF----- 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~---~~~~~~-------s~~~~~~~l--~~~~v~~-~dg~IVG~~~l~~~~----- 400 (500)
.+.||+++.+|++.+.+++...... .....| +.+.+...+ ..++++. .++++||++.+....
T Consensus 13 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~ 92 (179)
T 2oh1_A 13 EFLVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDT 92 (179)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHCCCCTTHHHHHHTTCEEEEECTTCCEEEEEEEESSCCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCcchhhccccchHHHHHHhhccCcEEEEEecCCeEEEEEEEecCCCcchh
Confidence 4679999999999999998764321 001111 111122222 4577777 889999999987431
Q ss_pred -------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 -------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 93 ~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (179)
T 2oh1_A 93 DLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKK 166 (179)
T ss_dssp HHHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEeccc
Confidence 136789999999999999999999999999999999999999888 468999999999998765
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=127.47 Aligned_cols=148 Identities=10% Similarity=0.078 Sum_probs=110.4
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeee---cCCCeEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL---DSFYVVEREGQIIACAALFPF---FKEKCGEV 407 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~---~~~~~~~I 407 (500)
..+.||+++++|++.+.+++...+..... ...+.+.+...+ ..++++..++++||++.+... ......++
T Consensus 33 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 112 (197)
T 3ld2_A 33 GSMKISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLDYSSLYPFPSGQHIVT 112 (197)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHCCTTTCCSCSCCCCHHHHHHHHTTTCEEEEEEESSCEEEEEEEEESCSSGGGTTEEE
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhccccCCCCccccccHHHHHHhhCCCCeEEEEEeCCCEEEEEEEEeccCCCCCCeEEE
Confidence 34679999999999999998876544322 224555555544 357888899999999999864 23355677
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEE
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~ 483 (500)
..++|+|+|||+|+|+.|++++++++++. ++.+.+.+ ..+.+||+|+||+..+...-... .+....+.++|
T Consensus 113 ~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~----~~g~~~~~~~~ 187 (197)
T 3ld2_A 113 FGIAVAEKERRKGIGRALVQIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQFF----LKGQYVDDLIY 187 (197)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred EEEEEcHHHcCCCHHHHHHHHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCEEeeeccceEE----ECCeecceeee
Confidence 79999999999999999999999999998 99999887 57899999999999886321100 01122356888
Q ss_pred EecCCCC
Q 010815 484 KKLLPDT 490 (500)
Q Consensus 484 kkll~~~ 490 (500)
.+.+.++
T Consensus 188 ~~~l~~~ 194 (197)
T 3ld2_A 188 SYDLEAA 194 (197)
T ss_dssp EEECC--
T ss_pred eehhccc
Confidence 8877664
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-13 Score=118.67 Aligned_cols=118 Identities=12% Similarity=0.124 Sum_probs=94.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~---~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
+++|. +++|.+.+.+++.... ..+++.+.+...+. .++++.+++++||++.+... ....+++..++|+|+|
T Consensus 2 ~~i~~-~~~d~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~ 75 (133)
T 1y7r_A 2 VKVTY-DIPTCEDYCALRINAG----MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGD-GGTVFQIVDIAVLKSY 75 (133)
T ss_dssp CEEEC-SCCCHHHHHHHHHHTT----CCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEEC-SSSEEEEEEEEECGGG
T ss_pred eeEEe-cccCHHHHHHHHHhCC----CCCcCHHHHHhhCCcCceEEEEEECCEEEEEEEEEcc-CCCeEEEEEEEEcHHH
Confidence 35677 7899999999976543 33466666666552 34578889999999998743 3467899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 76 rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~~~ 125 (133)
T 1y7r_A 76 QGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEPD 125 (133)
T ss_dssp CSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTTT
T ss_pred hcCchHHHHHHHHHHHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECCCC
Confidence 99999999999999999998876555544 578999999999998654
|
| >3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-13 Score=121.69 Aligned_cols=125 Identities=13% Similarity=0.060 Sum_probs=97.7
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC--ccCCHHHHHhhc-------CcEEEEEE--CCeEEEEEEEeeecCCCeEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFKEKCGE 406 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~~s~~~~~~~l-------~~~~v~~~--dg~IVG~~~l~~~~~~~~~~ 406 (500)
..+.||+++++|++.+.+++.+.....+. .+.+.+....++ ...+++.. ++++||++.+........++
T Consensus 6 ~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~~~~~~~~~~~~ 85 (168)
T 3fbu_A 6 ERLLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENILVGHIVFHKYFGEHTYE 85 (168)
T ss_dssp SSEEECCCCGGGHHHHHHHHTCTTTTTTSTTCSCCHHHHHHHHHHTTC--CCEEEEEETTTTEEEEEEEEEEEETTTEEE
T ss_pred CceEEEeCCHHHHHHHHHHhCCHHHHHhCCCCCCCHHHHHHHHHHHHhcccceEEEEECCCCCEEEEEEEEeecCCCcEE
Confidence 34679999999999999998653222221 234555555543 12555555 89999999998765567778
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+ .++|+|+|||+|+|+.|+..+++++++. |++++.+.+ ..+++||+|+||+..+..
T Consensus 86 i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 146 (168)
T 3fbu_A 86 I-GWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYF 146 (168)
T ss_dssp E-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred E-EEEECHHHhcCCHHHHHHHHHHHHHHhhCCceEEEEEeccCChHHHHHHHHCCCeEEEEe
Confidence 8 5669999999999999999999999876 999999988 578999999999998754
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.3e-13 Score=122.39 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=105.3
Q ss_pred ccccccccCCcccHHHHHHHHHHHHH----cCcC------ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC---
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVE----SGAL------VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK--- 401 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~----~~~~------~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~--- 401 (500)
.+.+.||+++.+|++.+.+++..... .... ...+.+.+..++ ..++++..++++||++.+.....
T Consensus 17 ~~~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~ 96 (201)
T 2pc1_A 17 FQGMQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVY 96 (201)
T ss_dssp ETTEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTCSTTCSSCHHHHHHHHHHTCEEEEEETTEEEEEEEEEEECCGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHHHHHHHHhCCCCCccccCCCCHHHHHHHHhcCceEEEEECCeEEEEEEEecCCchhh
Confidence 44567999999999999999876431 1110 122334444444 45677788999999999985422
Q ss_pred ------------CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 402 ------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 402 ------------~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
...+++..++|+|+|||+|+|+.|++++++ +.|++.+.+.+ ..+.+||+|+||+..+....
T Consensus 97 ~~~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~---~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 173 (201)
T 2pc1_A 97 DAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPL 173 (201)
T ss_dssp GGCBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHHH---HSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEECS
T ss_pred ccccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHHH---hCCCceEEEEEecCCHHHHHHHHHCCCEEEEEEEe
Confidence 156789999999999999999999999999 78999999988 46999999999999887643
Q ss_pred chhhhhhhcccCCceEEEEecCCC
Q 010815 466 PEERRKRINLSRNSKYYMKKLLPD 489 (500)
Q Consensus 466 p~~~~~~~~~~~~s~~~~kkll~~ 489 (500)
+ ...++|.|.+..
T Consensus 174 ~-----------~~~~~~~k~l~~ 186 (201)
T 2pc1_A 174 D-----------GVRLAYQKIKEK 186 (201)
T ss_dssp S-----------SCEEEEEEECCC
T ss_pred c-----------cchhhhHHHhcc
Confidence 3 345677776643
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=123.61 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=96.7
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcC-----cCccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecC---CC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK---EK 403 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~-----~~~~~s~~~~~~~l~------~~~v~~~dg~IVG~~~l~~~~~---~~ 403 (500)
..++||+++++|++.+.+++.+..... .....+.+.+...+. .++++..++++||++.+..... ..
T Consensus 3 ~~~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 82 (169)
T 3g8w_A 3 AMNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCH 82 (169)
T ss_dssp -CCCEEECCGGGHHHHHHHHHTCCCTTCHHHHHHHHCCHHHHHHHHSTTCTTEEEEEEESSSCEEEEEEEEECCSTTTTT
T ss_pred cceEEEecChHHHHHHHHHHHHhhhhcccCCccccccCHHHHHHHhCCCCcceEEEEEEECCEEEEEEEEEeccccccCc
Confidence 346799999999999999976543221 011223333444431 3677788999999999986432 25
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|..++|+| ||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 83 ~~~i~~~~v~~--rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 144 (169)
T 3g8w_A 83 KAILENNFVKN--NDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFE 144 (169)
T ss_dssp EEEEEEEEEGG--GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred eEEEEEEEEcc--CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeeee
Confidence 78999999999 99999999999999999999999999877 579999999999998764
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.9e-14 Score=121.65 Aligned_cols=119 Identities=18% Similarity=0.161 Sum_probs=91.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
+.||+++++|++.+.+++.+..... .+.+.+.+...+ ..++++..++++||++.+.. .....++|..++|+|+|
T Consensus 2 ~~ir~~~~~D~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 78 (138)
T 2atr_A 2 ITIKKQEIVKLEDVLHLYQAVGWTN--YTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPSY 78 (138)
T ss_dssp EEEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTTS
T ss_pred eEEEEcCccCHHHHHHHHHHcCCCc--hhhhHHHHHHhcCCCeEEEEEEECCeeEEEEEEEe-CCCCeEEEEEEEEchhh
Confidence 4799999999999999986532111 122334444433 34678888999999999874 34568899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
||+|+|+.|++++++++++.++ +.+.+ ..+.+||+|+||+..+..
T Consensus 79 rg~Gig~~ll~~~~~~~~~~~~--~~l~~~~n~~a~~~y~k~Gf~~~~~~ 126 (138)
T 2atr_A 79 QRQGIGSSLMKEALGNFKEAYQ--VQLATEETEKNVGFYRSMGFEILSTY 126 (138)
T ss_dssp CSSSHHHHHHHHHHGGGTTCSE--EECCCCCCHHHHHHHHHTTCCCGGGG
T ss_pred cCCCHHHHHHHHHHHHHHhcCe--EEEEeCCChHHHHHHHHcCCccccee
Confidence 9999999999999999988876 33433 579999999999998754
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=123.10 Aligned_cols=125 Identities=20% Similarity=0.173 Sum_probs=95.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHH----HHhhc--CcEEEEEECCeEEEEEEEeeec----CCCeEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL--DSFYVVEREGQIIACAALFPFF----KEKCGEVA 408 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~----~~~~l--~~~~v~~~dg~IVG~~~l~~~~----~~~~~~I~ 408 (500)
.+.||+++++|++.+.+++............+.+. +...+ ...+++..++++||++.+.... ....++|.
T Consensus 22 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~i~ 101 (172)
T 2r1i_A 22 VEVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILD 101 (172)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTSSSEEEEEETTTTCEEEEEEEECCTTCSSCEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCeEEEEECCeeEEEEEEEeccCCCCCCceEEEE
Confidence 35799999999999999998644332112223332 22222 2233332399999999987432 24678999
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 102 ~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 160 (172)
T 2r1i_A 102 ELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPN 160 (172)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCBSSCTT
T ss_pred EEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEecccC
Confidence 9999999999999999999999999999999999988 479999999999998764
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-13 Score=122.61 Aligned_cols=121 Identities=21% Similarity=0.308 Sum_probs=90.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHh----h---c------------CcEEEEE--ECCeEEEEEEEee
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----A---L------------DSFYVVE--REGQIIACAALFP 398 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~----~---l------------~~~~v~~--~dg~IVG~~~l~~ 398 (500)
+.||+++++|++.+.+++.... .....+.+.+.. + . ...+++. .++++||++.+..
T Consensus 8 ~~IR~a~~~D~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~ 84 (160)
T 1i12_A 8 FYIRRMEEGDLEQVTETLKVLT---TVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 84 (160)
T ss_dssp EEEEECCGGGHHHHHHHHTTTS---CCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEecCCHHHHHHHHHHHHhcc---cCCCCCHHHHHHHHHHHHhccccccccccccccceEEEEEEccCCeEEEEEEEEe
Confidence 4699999999999999864221 112233333221 1 0 1134443 6799999988764
Q ss_pred ecC-----CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 399 FFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 399 ~~~-----~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
... ...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 85 ~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~fY~k~GF~~~g~~ 155 (160)
T 1i12_A 85 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVE 155 (160)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEE
T ss_pred cccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcChhhHHHHHHCCCEEcCee
Confidence 321 23578999999999999999999999999999999999999998 456899999999998754
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-13 Score=120.15 Aligned_cols=118 Identities=19% Similarity=0.194 Sum_probs=94.5
Q ss_pred ccc-CCcccHHHHHHHHHHHHHcCcCccC--CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcC
Q 010815 342 TRT-AKVTDLSGIKQIIQPLVESGALVRR--TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 342 iR~-a~~~D~~~I~~L~~~~~~~~~~~~~--s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG 418 (500)
||. .+++|++.+.+++.+.+......+. ..+.+. .-..++++..+++++|++.+.+. ...+++..++|+|+|||
T Consensus 3 i~~~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vG~~~~~~~--~~~~~i~~~~v~~~~rg 79 (140)
T 1q2y_A 3 AVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELE-NESEHIVVYDGEKPVGAGRWRMK--DGYGKLERICVLKSHRS 79 (140)
T ss_dssp EEEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTTG-GGSEEEEEEETTEEEEEEEEEEE--TTEEEEEEEECCGGGTT
T ss_pred eEEecChHHHHHHHHHHHHHhccccCCChHHHHhhcc-CCcEEEEEEECCeEEEEEEEEEc--CCcEEEEEEEEcHHHhc
Confidence 443 4789999999999987765422111 111111 12457788889999999999853 46789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 419 QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 80 ~Gig~~ll~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~Gf~~~~~ 124 (140)
T 1q2y_A 80 AGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred cCHHHHHHHHHHHHHHHCCCcEEEEEecHHHHHHHHHCCCEEecc
Confidence 999999999999999999999999888 67999999999999876
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=8.5e-14 Score=124.80 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=93.3
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcC--cCccCCH--------HHHHhhc--------CcEEEEEEC-CeEEEEEEEeee
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFPF 399 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~--~~~~~s~--------~~~~~~l--------~~~~v~~~d-g~IVG~~~l~~~ 399 (500)
.+.||+++++|++.+.+++....... ....++. +.+...+ ..++++..+ +++||++.+...
T Consensus 2 ~l~lR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 81 (158)
T 1on0_A 2 TIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAE 81 (158)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEEC
T ss_pred ceeeeeCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEcCCCCceEEEEEEec
Confidence 35799999999999999875432210 0111221 1222222 135666655 899999988754
Q ss_pred c--CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 400 F--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 400 ~--~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
. .....++..++|+|+|||+|+|+.|++.+++++++.|+++|.+.+ ..|++||+|+||+..+.
T Consensus 82 ~~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~ 150 (158)
T 1on0_A 82 PEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 150 (158)
T ss_dssp TTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred CCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEEeE
Confidence 3 235678889999999999999999999999999999999999998 57999999999998764
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-13 Score=131.02 Aligned_cols=121 Identities=20% Similarity=0.219 Sum_probs=99.2
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
.+.+.||+++.+|++.+.++....+. .++....+. ...+++++.++++||++.+........++|..++|+|+|
T Consensus 96 ~~~~~iR~~~~~D~~~i~~l~~~~~~----~~~~~~~~~--~~~~~v~~~~g~lVG~~~~~~~~~~~~~~i~~l~V~p~~ 169 (228)
T 3ec4_A 96 FDDPGIVALGETDVPEMTALALATEP----GPWASGTWR--YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEY 169 (228)
T ss_dssp CCCTTCEECCGGGHHHHHHHHHHSCC----SCCCTTGGG--SSCEEEEEETTEEEEEEEECCCSSTTEEEEEEEEECGGG
T ss_pred CCCCEEEECChhCHHHHHHHHHhhCC----CCcChhhcc--CccEEEEEECCEEEEEEEEEEecCCCcEEEEEEEECHHH
Confidence 34467999999999999999654432 333333222 357888999999999999985435678999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
||||||+.|++++++++++.| +.+.+.+ ..+++||+|+||+..+...
T Consensus 170 Rg~GiG~~Ll~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~~ 220 (228)
T 3ec4_A 170 RGRGLAARLIRKVIAGMAARG-EVPYLHSYASNASAIRLYESLGFRARRAMT 220 (228)
T ss_dssp TTSSHHHHHHHHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEEEEEE
Confidence 999999999999999999999 8888877 4699999999999987653
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.7e-14 Score=125.03 Aligned_cols=122 Identities=23% Similarity=0.275 Sum_probs=96.2
Q ss_pred ccccccCCcccHH-HHHHHHHHHHHcCcCccCCHHHHHhhc---------CcEEEEEE--CCeEEEEEEEeeec-----C
Q 010815 339 YEGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----K 401 (500)
Q Consensus 339 ~~~iR~a~~~D~~-~I~~L~~~~~~~~~~~~~s~~~~~~~l---------~~~~v~~~--dg~IVG~~~l~~~~-----~ 401 (500)
.+.||+++.+|++ .+.+++....... ..+.+.+...+ ..++++.+ ++++||++.+.... .
T Consensus 21 ~~~iR~~~~~D~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~~~~~~~~~ 97 (165)
T 4ag7_A 21 NFKVRPLAKDDFSKGYVDLLSQLTSVG---NLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGA 97 (165)
T ss_dssp TEEEEECBGGGGTTTHHHHHHHHSCCT---TCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEEEEECSHHHH
T ss_pred cEEEeeCCHhHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEEecccccCCC
Confidence 3579999999999 5999887543322 23444444322 24677777 89999999987421 2
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 98 ~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~~~~~ 160 (165)
T 4ag7_A 98 GSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNF 160 (165)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTTTCEECCCC
T ss_pred CcEEEEEEEEECHHhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHCCCCcccch
Confidence 35788999999999999999999999999999999999999988 567899999999887654
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.6e-13 Score=119.78 Aligned_cols=116 Identities=21% Similarity=0.302 Sum_probs=95.4
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
|.+.||+++++|++.+..+.. ..+.+.+...+ ..++++..++++||++.+.+. ....++|..++|+|+
T Consensus 3 M~~~ir~~~~~D~~~i~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~ 72 (157)
T 1y9k_A 3 MSVVIERIPKEAIPKSLLLLA---------DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEH 72 (157)
T ss_dssp CCCEEEEECGGGCCHHHHHHH---------CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEEC-STTEEEEEEEEECGG
T ss_pred ceEEEEECCHhHhhhhhcccc---------CCCHHHHHHHhccCcEEEEEECCEEEEEEEEEcC-CCCEEEEEEEEECHH
Confidence 557899999999998854421 12444444444 467888889999999999743 457889999999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 73 ~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (157)
T 1y9k_A 73 LQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 124 (157)
T ss_dssp GCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEeccc
Confidence 999999999999999999999999999888 358999999999998754
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=126.67 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=82.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC-ccC---CHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRR---TDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 407 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~---s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~~~~~~~I 407 (500)
..||+++++|++.+.+++......... ... +.+....++ ..++++..++++||++.+........++|
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i 93 (159)
T 2aj6_A 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNI 93 (159)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEEE
T ss_pred hhcCCCchhhHHHHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHhCCCcEEEEEEECCeEEEEEEEEeecCCCEEEE
Confidence 479999999999999999876544321 111 112211211 24677888999999999885555678999
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 94 ~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 153 (159)
T 2aj6_A 94 ELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVK 153 (159)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCCC-----------------------
T ss_pred EEEEECHHHccCCHHHHHHHHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHCCCEEeeeE
Confidence 99999999999999999999999999999998888777 368999999999987643
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=8e-14 Score=126.46 Aligned_cols=127 Identities=12% Similarity=0.175 Sum_probs=98.7
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCc--CccCC--------HHHHHhhc--------CcEEEEEEC-CeEEEEEEEe
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGA--LVRRT--------DEELLKAL--------DSFYVVERE-GQIIACAALF 397 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~--~~~~s--------~~~~~~~l--------~~~~v~~~d-g~IVG~~~l~ 397 (500)
.|.+.||+++++|++.+.+++.+.+...+ ...++ .+.+..++ ..++++..+ +++||++.+.
T Consensus 24 ~m~i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~ 103 (180)
T 1ufh_A 24 AMTIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIH 103 (180)
T ss_dssp --CCEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEE
T ss_pred CcEEEEEcCCHHHHHHHHHHHHHHHhhhhhccCCCcchhhhhhhHHHHHHHHHhhcCCCCeeEEEEEcCCCCEEEEEEEE
Confidence 34578999999999999999876543211 01111 12233333 146777777 9999999998
Q ss_pred eecC--CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 398 PFFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 398 ~~~~--~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.... ...+++..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 104 ~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 175 (180)
T 1ufh_A 104 AEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVV 175 (180)
T ss_dssp ECTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCCC
T ss_pred ecCCCCCCcEEEEEEEECHhhcCCChHHHHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHCCCEEeeeE
Confidence 6542 37889999999999999999999999999999999999999988 479999999999998764
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.9e-13 Score=119.21 Aligned_cols=124 Identities=11% Similarity=0.127 Sum_probs=98.9
Q ss_pred cccccccCCcccHHHHHHHHHHH--HHcCcC-ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeee-cCCCeE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPL--VESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPF-FKEKCG 405 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~--~~~~~~-~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~-~~~~~~ 405 (500)
+.+.||+++++|.+.+.+++... ....+. ...+.+.+..++ ..++++..++++||++.+... .....+
T Consensus 10 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 89 (160)
T 3exn_A 10 LTLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAEDA 89 (160)
T ss_dssp CCCEEEECCGGGHHHHHHHHHTCHHHHHHTTCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEETCSSTTCE
T ss_pred CceEEEECChhhHHHHHHHHHhChHHHhccccCCCChHHHHHHHHHhhhCCCceEEEEEECCeEEEEEEeecccCCCCce
Confidence 44689999999999999998763 211121 234555554443 247888889999999999864 245789
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||+|+|+.|++++++++++ +..+.+.+ ..+.+||+|+||+..+..
T Consensus 90 ~i~~l~v~p~~rg~Gig~~ll~~~~~~~~~--~~~i~~~~~~~n~~a~~~y~~~Gf~~~~~~ 149 (160)
T 3exn_A 90 TLSLLLIREDHQGRGLGRQALERFAAGLDG--VRRLYAVVYGHNPKAKAFFQAQGFRYVKDG 149 (160)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHTCTT--CCEEEEEEESSCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHhh--CCeEEEEEeeCCHHHHHHHHHCCCEEcccC
Confidence 999999999999999999999999999987 88888877 479999999999998765
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.2e-13 Score=122.75 Aligned_cols=128 Identities=18% Similarity=0.232 Sum_probs=95.0
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcC--cC-ccCC-----HHHHHhhc--CcEEEEEECCeEEEEEEEeee-------
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESG--AL-VRRT-----DEELLKAL--DSFYVVEREGQIIACAALFPF------- 399 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~--~~-~~~s-----~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~------- 399 (500)
.+..+||+++.+|++.+.+++.+..... +. ..|. .+.+...+ ..+++++.++++||++.+...
T Consensus 16 ~~~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 95 (188)
T 3h4q_A 16 YFQGMIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDD 95 (188)
T ss_dssp ---CCEEECCGGGHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHTTCEEEEEETTEEEEEEEEESCCCGGGGG
T ss_pred ceeEEEEecCHhhHHHHHHHHHHHHHHHHhccccccccCCCcHHHHHHhhccCcEEEEEECCEEEEEEEEEccCcccccc
Confidence 3446899999999999999998762111 10 1111 34444443 468889999999999999642
Q ss_pred -----cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 400 -----FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 400 -----~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
.....++|..++|+|+| ||+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+....+
T Consensus 96 ~~w~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 169 (188)
T 3h4q_A 96 IDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLME 169 (188)
T ss_dssp SCCSSCCTTCEEEEEEECCSSC--TTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCEEC------
T ss_pred cccccCCCCeEEEEEEEECCcc--CcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCeEeceEEec
Confidence 22456889999999999 999999999999999999999999998 478999999999999876544
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.2e-14 Score=124.91 Aligned_cols=122 Identities=18% Similarity=0.225 Sum_probs=80.2
Q ss_pred cccCCcccHHHHHHHHHHHHHcCc------CccC-------CHHH-HHhhcCcEEEEEECCeEEEEEEEeeec-------
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGA------LVRR-------TDEE-LLKALDSFYVVEREGQIIACAALFPFF------- 400 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~------~~~~-------s~~~-~~~~l~~~~v~~~dg~IVG~~~l~~~~------- 400 (500)
||+++.+|++.+.+++.+...... .... .... +...-..++++++++++||++.+....
T Consensus 5 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 84 (166)
T 3jvn_A 5 IRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSK 84 (166)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHSCC----------CCCHHHHHHCTTEEEEEEESSSSEEEEEEEEEEEECCSSSC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhhcCchhhcchhhHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEeecccccccc
Confidence 999999999999999987643211 0000 1111 111112477888899999999986421
Q ss_pred CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 ~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 85 ~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 151 (166)
T 3jvn_A 85 LVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHY 151 (166)
T ss_dssp CEEEEEEEEEEECTTTCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--CCBC---------------
T ss_pred CccEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHH
Confidence 124578999999999999999999999999999999999999988 368999999999998755
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.7e-13 Score=121.30 Aligned_cols=123 Identities=23% Similarity=0.278 Sum_probs=98.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc---CccCCHHHHHhh-c-----CcEEEEEECCe--------EEEEEEEeeec--
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA-L-----DSFYVVEREGQ--------IIACAALFPFF-- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~---~~~~s~~~~~~~-l-----~~~~v~~~dg~--------IVG~~~l~~~~-- 400 (500)
+.||+++++|++.+.+++.+...... ...++.+.+... + ..+++++.+++ +||++.+....
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ivG~~~~~~~~~~ 83 (171)
T 2b5g_A 4 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 83 (171)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhccCCCcEEEEEEECCCcccccCCceEEEEEEEeecCC
Confidence 57999999999999999987653322 133455555443 2 35777777777 89999986432
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
....+++..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 84 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf~~~~~ 150 (171)
T 2b5g_A 84 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 150 (171)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred cCCceEEEEEEEECHhhhCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHcCCEeccc
Confidence 223578999999999999999999999999999999999999988 57999999999999765
|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.3e-13 Score=143.40 Aligned_cols=129 Identities=17% Similarity=0.184 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeC----
Q 010815 56 SESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD---- 131 (500)
Q Consensus 56 ~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd---- 131 (500)
+...+.+...-..++..+... .|+++|++ +..+++.+. +++.. +++. +++..++
T Consensus 108 ~~~~d~l~s~Ge~~s~~l~~~--------~L~~~Gi~----a~~l~~~~~-l~t~~--------~~~~-~~~~~~~~~~~ 165 (449)
T 2j0w_A 108 PALTDELVSHGELMSTLLFVE--------ILRERDVQ----AQWFDVRKV-MRTND--------RFGR-AEPDIAALAEL 165 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------HHHTTSCC----EEECCGGGT-CBBCS--------CTTS-CCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHHHCCCc----EEEEchHHh-eeecC--------CCCC-ccccHhHhHHH
Confidence 444455544455556555443 68899998 888888876 44421 1221 2222222
Q ss_pred -HHHHHHHHhCCCcEEEc-CcccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccC
Q 010815 132 -VTRMRERLDGGCLVILS-NLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLT 199 (500)
Q Consensus 132 -~~~I~~lL~~g~IPVi~-~~~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~ 199 (500)
.+.++.|++.+ |||++ +.+.+++|..++++ +|.+|+.+|.+|+||+++++|||||+ | |++++|++++
T Consensus 166 ~~~~l~~l~~~~-IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is 244 (449)
T 2j0w_A 166 AALQLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIA 244 (449)
T ss_dssp HHHHTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEE
T ss_pred HHHHHHHHhcCC-EEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCcc
Confidence 34667777655 99997 57778889999888 99999999999999999999999998 3 3689999999
Q ss_pred HHHHHHHH
Q 010815 200 LQEADSLI 207 (500)
Q Consensus 200 ~~e~~~~~ 207 (500)
.+|+.++.
T Consensus 245 ~~e~~ela 252 (449)
T 2j0w_A 245 FAEAAEMA 252 (449)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998885
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.4e-13 Score=126.27 Aligned_cols=147 Identities=16% Similarity=0.246 Sum_probs=106.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec--------------
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~-------------- 400 (500)
.+.||+++.+|++.+.+++...+... ..++.+.+...+ ..+++++.++++||++.+.+..
T Consensus 12 ~~~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~ 89 (224)
T 2ree_A 12 YYNLRHPKIEDLRDLIALETLCWSEN--LQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVP 89 (224)
T ss_dssp CEEEECCCGGGHHHHHHHHHHHSCTT--TCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTGG
T ss_pred ceEEEECCHHHHHHHHHHHHHhccCc--cccCHHHHHHHHHhCCCceEEEEECCEEEEEEEEeccCchhhchhhcccchh
Confidence 35799999999999999987655432 235666555443 3467888899999999885321
Q ss_pred -----CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEE--EE-------------------------cHH
Q 010815 401 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLF--LL-------------------------TTR 447 (500)
Q Consensus 401 -----~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~--l~-------------------------~~~ 447 (500)
.....+|..++|+|+|||+|||+.|++++++++++. |++.+. +. .++
T Consensus 90 ~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~l~~~~~~~~~~~~~~~y~~~~~~~g~~N~~ 169 (224)
T 2ree_A 90 LLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVDP 169 (224)
T ss_dssp GGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECCSSGGGTTTSCHHHHTTCBCTTSCBSSH
T ss_pred hccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCccEEEEeccCCccccCCCCCHHHHHHHHhcCCcccCc
Confidence 224678999999999999999999999999999996 999998 31 135
Q ss_pred HHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCCC
Q 010815 448 TADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 490 (500)
Q Consensus 448 a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~~ 490 (500)
+++||+|+||+..+....-... . .......++|.+.++.+
T Consensus 170 a~~fY~k~GF~~~g~~~~y~~~-~--~~~~~~~~~m~~~l~~~ 209 (224)
T 2ree_A 170 LLRFHQIHGAKIEKLLPGYRPK-D--WENQTCGVLVSYDIQHR 209 (224)
T ss_dssp HHHHHHHTTCEEEEEETTSCTT-C--GGGTTCEEEEEECCTTC
T ss_pred ceeeeecCCeEEEEEccccccc-c--ccCCCceEEEEEecccc
Confidence 8999999999998754211000 0 00123467888777544
|
| >2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.1e-14 Score=124.31 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=91.0
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh--c-C-cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEcc
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--L-D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~--l-~-~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p 414 (500)
.+.||+++++|++.+.+++.......+... ....+... . . ..+++..++++||++.+.... ....++..++|+|
T Consensus 3 ~l~ir~~~~~D~~~i~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~-~~~~~i~~~~v~~ 80 (149)
T 2fl4_A 3 EIHFEKVTSDNRKAVENLQVFAEQQAFIES-MAENLKESDQFPEWESAGIYDGNQLIGYAMYGRWQ-DGRVWLDRFLIDQ 80 (149)
T ss_dssp CCCCCCCCTTTHHHHHTCCCTTCHHHHHHH-HHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEECT-TSCEEEEEEEECG
T ss_pred eEEEEECCHHHHHHHHhhcCCHHHHhccCC-HHHHHHHHhcCcccceEEEEECCeEEEEEEEeecC-CCcEEEEEEEECH
Confidence 457999999999999888532111111000 01111111 1 1 346667899999999876432 4567888999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 415 ECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+|||||+|+.|++.+++++++. +++++.+.+ .+|++||+|+||+..+..
T Consensus 81 ~~~g~Gig~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~ 134 (149)
T 2fl4_A 81 RFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGEL 134 (149)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred HHcCCCHHHHHHHHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEeccc
Confidence 9999999999999999999875 799999988 579999999999998765
|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.1e-13 Score=142.56 Aligned_cols=132 Identities=15% Similarity=0.133 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeee----C
Q 010815 56 SESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV----D 131 (500)
Q Consensus 56 ~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~v----d 131 (500)
+..++.+...-..++..+... .|+++|++ +..+++.+.++++.... +. +++..+ .
T Consensus 137 ~r~~d~l~s~GE~~s~~ll~~--------~L~~~Gi~----A~~l~~~~~~l~t~~~~--------~~-~~i~~~~~~~~ 195 (510)
T 2cdq_A 137 LRTRDYLVSFGECLSTRIFAA--------YLNTIGVK----ARQYDAFEIGFITTDDF--------TN-GDILEATYPAV 195 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEECGGGTTCEECSCS--------TT-CCBCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHHHCCCC----EEEEEhhHeeEEEecCC--------Cc-cchhhHHHHHH
Confidence 444555555555566666554 68999998 89999999877775321 11 222222 2
Q ss_pred HHHHH-HHHhCCCcEEEcC-cccCC-CCCeeecC---HHHHHHHHHHHcCCCEEEEEecCcccC-------CCCcccccc
Q 010815 132 VTRMR-ERLDGGCLVILSN-LGYSS-SGEVLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 198 (500)
Q Consensus 132 ~~~I~-~lL~~g~IPVi~~-~~~~~-~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i 198 (500)
.+.|. .|++.|.|||+++ .+.++ +|.+.+++ +|..|+.+|.+|+||.++++|||||++ |++++|++|
T Consensus 196 ~~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~I 275 (510)
T 2cdq_A 196 AKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYL 275 (510)
T ss_dssp HHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEE
T ss_pred HHHHHHHHHhCCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEe
Confidence 34555 4789999999998 67777 89999887 999999999999999999999999983 368999999
Q ss_pred CHHHHHHHHH
Q 010815 199 TLQEADSLIR 208 (500)
Q Consensus 199 ~~~e~~~~~~ 208 (500)
+.+|+.++..
T Consensus 276 s~~E~~ela~ 285 (510)
T 2cdq_A 276 TFDEAAELAY 285 (510)
T ss_dssp EHHHHHHHHH
T ss_pred CHHHHHHHHh
Confidence 9999888853
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=122.05 Aligned_cols=120 Identities=25% Similarity=0.276 Sum_probs=91.0
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcC-----c-CccCCHHHHHhh---c-CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A-LVRRTDEELLKA---L-DSFYVVEREGQIIACAALFPFFKEKCGEV 407 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~-----~-~~~~s~~~~~~~---l-~~~~v~~~dg~IVG~~~l~~~~~~~~~~I 407 (500)
+.+.||+++++|++.+.+++....... + ..+.+.+.+... . ..++++..++++||++.+.. .+++
T Consensus 3 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-----~~~~ 77 (160)
T 3f8k_A 3 DQIKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVGEASLHK-----DGEF 77 (160)
T ss_dssp --CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC-----------CEEEEEEEETTEEEEEEEEET-----TSBE
T ss_pred CcEEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHHHhccCCceEEEEEECCeEEEEEEeec-----ceEE
Confidence 346799999999999999987643221 0 112233333321 1 24578889999999999982 4556
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 78 -~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 136 (160)
T 3f8k_A 78 -SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMRFYE 136 (160)
T ss_dssp -EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEEECS
T ss_pred -EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEEeec
Confidence 8999999999999999999999999999999999988 479999999999998654
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=6.2e-14 Score=125.54 Aligned_cols=140 Identities=21% Similarity=0.265 Sum_probs=104.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC-------ccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 412 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~-------~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V 412 (500)
++||+++.+| +.+.+++......... .......+...-..++++.+++++||++.+.... ...++|..++|
T Consensus 1 ~~iR~~~~~D-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~~~~~i~~~~V 78 (159)
T 1yx0_A 1 MHIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELD-TRHGEIKSMRT 78 (159)
T ss_dssp CCEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEEE-TTEEECCCCCC
T ss_pred CeeEEcCcCC-HHHHHHHHHHHHHhhccCCcchhhhhhHHHhcCCCceEEEEEECCEEEEEEEEEEcC-CCcEEEEEEEE
Confidence 3689999999 9999998765432211 1112333333335678888899999999998543 46889999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEec
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkl 486 (500)
+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.. ..|.....+.++++.+
T Consensus 79 ~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~-------~~~~~~~~~~~~~~~~ 151 (159)
T 1yx0_A 79 SASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF-------ADYGEDPNSVFMTKKL 151 (159)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC-------TTSCCCTTCCCEEECC
T ss_pred CHhhcCCCHHHHHHHHHHHHHHhCCCcEEEEEecccccCchHHHHHHHcCCEEcccc-------ccccCCCcchhhhHHH
Confidence 999999999999999999999999999998876 268999999999998654 2344455555666655
Q ss_pred CC
Q 010815 487 LP 488 (500)
Q Consensus 487 l~ 488 (500)
.+
T Consensus 152 ~~ 153 (159)
T 1yx0_A 152 LE 153 (159)
T ss_dssp --
T ss_pred Hh
Confidence 43
|
| >3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=9.2e-13 Score=119.29 Aligned_cols=147 Identities=17% Similarity=0.102 Sum_probs=102.9
Q ss_pred ccccccCCcccHHHHHHHHHHHH--HcCcC-----ccCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEee
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLV--ESGAL-----VRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFP 398 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~--~~~~~-----~~~s~~~~~~~l-----------~~~~v~~~--dg~IVG~~~l~~ 398 (500)
.+.||+++++|++.+.+++.+.. ...+. ...+.+.+...+ ...+++.. ++++||++.+..
T Consensus 9 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~ 88 (184)
T 3igr_A 9 HYQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSN 88 (184)
T ss_dssp TEEEEECCGGGHHHHHHHHHHTHHHHTTTSCCCCGGGGSHHHHHHHHHHHHHHHHTTSCEEEEEEETTTTEEEEEEEEEE
T ss_pred cEEEEecCHHHHHHHHHHHhccHhhcCcCCCCchhhccCHHHHHHHHHHHHhhcccCceEEEEEEECCCCeEEEEEEeee
Confidence 46799999999999999987632 11221 112344443332 22444433 789999999976
Q ss_pred ecC--CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhh
Q 010815 399 FFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRK 471 (500)
Q Consensus 399 ~~~--~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a-~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~ 471 (500)
... ...++++ ++|+|+|||+|+|+.|++.+++++ ++.|++.+.+.+ ..|++||+|+||+..+...-...
T Consensus 89 ~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~~~~~~--- 164 (184)
T 3igr_A 89 ITRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAALGFVKEGEAKKYLY--- 164 (184)
T ss_dssp EECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEEEEEEE---
T ss_pred cccccCceEEEE-EEEChhhccCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCEeeeeehhhhh---
Confidence 543 3567774 899999999999999999999999 667999999988 57999999999999886421100
Q ss_pred hhcccCCceEEEEecCCCC
Q 010815 472 RINLSRNSKYYMKKLLPDT 490 (500)
Q Consensus 472 ~~~~~~~s~~~~kkll~~~ 490 (500)
.+....+.+.|..+.+++
T Consensus 165 -~~g~~~d~~~~~~~~~ew 182 (184)
T 3igr_A 165 -INGAWEDHILTSKINDDW 182 (184)
T ss_dssp -ETTEEEEEEEEEEECTTC
T ss_pred -hCCeEEEEEeeeehHhhc
Confidence 011223446666666555
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-13 Score=124.85 Aligned_cols=123 Identities=26% Similarity=0.293 Sum_probs=97.3
Q ss_pred cccccccCCcccHHH-HHHHHHHHHHcCcCccCCHHHHHhhc--------CcEEEEEE--CCeEEEEEEEeeec-----C
Q 010815 338 LYEGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF-----K 401 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~-I~~L~~~~~~~~~~~~~s~~~~~~~l--------~~~~v~~~--dg~IVG~~~l~~~~-----~ 401 (500)
+.++||+++.+|++. +.+++...... .+++.+.+..++ ..++++++ ++++||++.+.... .
T Consensus 37 ~~~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ivG~~~~~~~~~~~~~~ 113 (184)
T 2o28_A 37 EGLVLRPLCTADLNRGFFKVLGQLTET---GVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSC 113 (184)
T ss_dssp TTEEEEECBGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHHHSCEEEEEEEETTTTEEEEEEEEEEEECSHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHhhc---CCCCHHHHHHHHHHhhcCCCeEEEEEEeCCCCcEEEEEEEEeccccCCCC
Confidence 346799999999998 99997654332 234555544433 13556677 89999999987532 2
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
...++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 114 ~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 176 (184)
T 2o28_A 114 AKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEEN 176 (184)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTEEEEEEEECGGGHHHHHTTTCEECSSE
T ss_pred CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCeeeccc
Confidence 35789999999999999999999999999999999999999988 456999999999987654
|
| >2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.1e-13 Score=122.91 Aligned_cols=128 Identities=14% Similarity=0.091 Sum_probs=99.8
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHH-hhc--------CcEEEEEECCeEEEEEEEeee-----
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELL-KAL--------DSFYVVEREGQIIACAALFPF----- 399 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~-~~l--------~~~~v~~~dg~IVG~~~l~~~----- 399 (500)
+.+.||+++++|++.+.+++.......+. ...+.+... .++ ..++++..++++||++.+...
T Consensus 24 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 103 (202)
T 2bue_A 24 DSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGD 103 (202)
T ss_dssp CCEEEEECCGGGHHHHHHHHTSHHHHTTSCGGGCSCCHHHHHHHHCHHHHHTTTEEEEEEEETTEEEEEEEEEEGGGCCT
T ss_pred CcEEEEECCHHHHHHHHHHHcCchhhhhcCCCcccccHHHHHHHHHHhhcCCCCceeEEEEECCEEEEEEEEEEeccccc
Confidence 44679999999999999998765433332 112333222 111 256788889999999998742
Q ss_pred ------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 400 ------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 400 ------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
.....++|..++|+|+|||+|+|+.|++.+++++++ .|++.+.+.+ ..+++||+|+||+..+....
T Consensus 104 ~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~~~~~~ 180 (202)
T 2bue_A 104 GWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTT 180 (202)
T ss_dssp TSSTTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHHHHHHTSTTCCEEEECCCTTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccccCCCCceEEEEEEEChhhccCChHHHHHHHHHHHHHhCCCCcEEEeCcccCCHHHHHHHHHcCCEEeeeecC
Confidence 224578999999999999999999999999999998 4999999987 47999999999999987643
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.7e-12 Score=116.71 Aligned_cols=143 Identities=14% Similarity=0.160 Sum_probs=103.7
Q ss_pred ccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcC
Q 010815 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 343 R~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG 418 (500)
.+++++|++.+.++. ..+.... .....+.+.... ..++++..++++||++.+.........++..++|+|+|||
T Consensus 16 ~~~~~~d~~~l~~l~-~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~rg 93 (168)
T 1z4r_A 16 PKANRRVLLWLVGLQ-NVFSHQL-PRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQV 93 (168)
T ss_dssp TTSCHHHHHHHHHHH-HHHHHHC-TTSCHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCS
T ss_pred CCCchhHHHHHHHHH-HhccCcC-ccccHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCCceEEEEEEECHHHhC
Confidence 556788999999986 3333322 122333333322 3577888899999999998766666789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCC
Q 010815 419 QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~ 489 (500)
+|+|+.|++++++++++.|++.+.... ..+++||+|+||+..+.. +......|.....+.++|.+.++.
T Consensus 94 ~Gig~~ll~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~GF~~~~~~--~~~~~~~y~g~~~d~~~m~~~l~~ 163 (168)
T 1z4r_A 94 KGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKV--PKSRYLGYIKDYEGATLMECELNP 163 (168)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCCS--CHHHHTTTSCCCTTCEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHcCCcEEEEeCChHHHHHHHHCCCcEeecc--ccchhhhhhhhcCCceEEEEecCC
Confidence 999999999999999999998875433 679999999999987654 322222233344567888887743
|
| >1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-12 Score=117.28 Aligned_cols=126 Identities=9% Similarity=0.053 Sum_probs=93.8
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHc-----CcC-ccCC----HHHHHh-------hcCcEEEEEECCeEEEEEEEeee
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVES-----GAL-VRRT----DEELLK-------ALDSFYVVEREGQIIACAALFPF 399 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~-----~~~-~~~s----~~~~~~-------~l~~~~v~~~dg~IVG~~~l~~~ 399 (500)
.+.+.||+++++|++.+.+++...... .+. .+.+ .+.+.. ....++++..++++||++.+...
T Consensus 11 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 90 (182)
T 1s7k_A 11 STTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAI 90 (182)
T ss_dssp SSSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEECCHHHHHHHHHHHHhCHHHhhccCCCccccCCHHHHHHHHHHHHHHHhcCCceEEEEEECCEEEEEEEEEEc
Confidence 344679999999999999998643221 000 1111 111221 12457888899999999999865
Q ss_pred c-CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 ~-~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
. .....+++ ++|+|+|||+|+|+.|+..+++++++ .|++.+.+.+ ..+++||+|+||+..+..
T Consensus 91 ~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 159 (182)
T 1s7k_A 91 EPINKAAYIG-YWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 159 (182)
T ss_dssp ETTTTEEEEE-EEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCceEEEE-EEECHhhcCCCHHHHHHHHHHHHHHhhCCccEEEEEecCCCHHHHHHHHHCCCEEEeee
Confidence 3 34567774 79999999999999999999999987 7999999988 479999999999998754
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-14 Score=129.19 Aligned_cols=148 Identities=16% Similarity=0.164 Sum_probs=104.6
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC----c------------------cCCHH-----HHHhhc----CcEEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----V------------------RRTDE-----ELLKAL----DSFYVVER 386 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~------------------~~s~~-----~~~~~l----~~~~v~~~ 386 (500)
|.+.||+++++|++.+.+++......... . ..... .+...+ ..++++..
T Consensus 4 m~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 83 (187)
T 3pp9_A 4 MSLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALL 83 (187)
T ss_dssp -CCEEEECCGGGTTSCCCCCCEEEEEEEEEEEECSSTTCEEEEEEEEEEEEEECC-----CCCGGGGSSCSSEEEEEEEE
T ss_pred eeEEEEeccccchhhHhhccCceEEeeEEEEecccccccceeehhhcchhhhccCCccchHHHHHHHHhCCCcEEEEEEE
Confidence 45689999999999998884322111000 0 00110 122222 24788889
Q ss_pred CCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 387 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 387 dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
++++||++.+... .+..++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 84 ~~~~vG~~~~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 162 (187)
T 3pp9_A 84 HNQIIGFIVLKKN-WNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGF 162 (187)
T ss_dssp TTEEEEEEEEEEC-TTSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEEEEEcC-CCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEece
Confidence 9999999999853 356789999999999999999999999999999999999999988 47999999999999987
Q ss_pred eccchhhhhhhcccCCceEEEEecCC
Q 010815 463 EMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 463 ~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
....... .+.......++|.+.+.
T Consensus 163 ~~~~~~~--~~~~~~e~~~~~~~~l~ 186 (187)
T 3pp9_A 163 DFLVYKG--LNMTSDEVAIYWYLHFD 186 (187)
T ss_dssp ESSGGGG--TCSSSCCCEEEEEEEC-
T ss_pred EeeeccC--CcccCCcEEEEEEeecC
Confidence 6443221 11222445567766654
|
| >2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=120.01 Aligned_cols=139 Identities=18% Similarity=0.136 Sum_probs=99.8
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCc-------CccCC---HH-HHHh-------hcCcEEEEEE-CCeEEEEEEEee
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGA-------LVRRT---DE-ELLK-------ALDSFYVVER-EGQIIACAALFP 398 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~-------~~~~s---~~-~~~~-------~l~~~~v~~~-dg~IVG~~~l~~ 398 (500)
|.+.||+++.+|++.+.+++...+.... +.... .. .+.. .-..++++.+ ++++||++.+..
T Consensus 2 M~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~ 81 (204)
T 2qec_A 2 MSPTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDR 81 (204)
T ss_dssp CCCEEEECCGGGHHHHHHHHHHHHTTCHHHHTTSCSCCGGGHHHHHHHHHHHHHTHHHHEEEEEEECTTSCEEEEEEEEC
T ss_pred CccEEecCCHHHHHHHHHHHHHHhhcChhhEEEeCCCchhHHHHHHHHHHHHhhhcccCceEEEEECCCCCEEEEEEEeC
Confidence 4467999999999999999877553311 11111 11 1111 1135778888 899999999875
Q ss_pred ec--------------------------------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCE
Q 010815 399 FF--------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440 (500)
Q Consensus 399 ~~--------------------------------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~ 440 (500)
.. ....+++..++|+|+|||+|+|+.|++++++++++. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~---~ 158 (204)
T 2qec_A 82 PDGNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDE---A 158 (204)
T ss_dssp CC------------CCHHHHHC-CCC---------CTTSCSSCCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTS---C
T ss_pred CCCCcchhHHHhhhhHHHHHhCccHHHHHHHHHHHHhhCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHhhhC---C
Confidence 32 234678999999999999999999999999999877 4
Q ss_pred EEEEc--HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 441 LFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 441 I~l~~--~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
+.+.+ ..+.+||+|+||+..+...++. .....+.|.+-.
T Consensus 159 ~~v~~~n~~a~~~y~k~GF~~~~~~~~~~--------~~~~~~~m~~~~ 199 (204)
T 2qec_A 159 IYLEATSTRAAQLYNRLGFVPLGYIPSDD--------DGTPELAMWKPP 199 (204)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEECCSS--------CSSCEEEEEECC
T ss_pred eEEEecCccchHHHHhcCCeEeEEEEcCC--------CCeEEEEEEeCC
Confidence 55555 5799999999999998775442 223346666644
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=4.1e-13 Score=118.65 Aligned_cols=131 Identities=20% Similarity=0.151 Sum_probs=96.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHH--hhcCcEEEE-EECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~--~~l~~~~v~-~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
+.||.++..|.+.+.++......... +... ......+++ +.++++||++.+.. ....++|..++|+|+|
T Consensus 16 m~ir~~~~~d~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~p~~ 87 (152)
T 2g3a_A 16 MNFVLSDVADAEAEKAIRDPLVAYNL------ARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAM 87 (152)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHHHH------HHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGG
T ss_pred CeEEEecCCCHHHHHHHHHHHHHhhh------hhcCCCCccceEEEEEeCCCeEEEEEEEEE--eCCEEEEEEEEECHHH
Confidence 46888888888888887654432110 0110 111123334 44899999998875 3468899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEec
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkl 486 (500)
||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.... | ......++|+|-
T Consensus 88 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~~-------~-~~~~~~~~m~k~ 151 (152)
T 2g3a_A 88 RGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLGP-------L-SSGQSITWLEKR 151 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEECC-------C-TTSCCEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCEEEEEecCccHHHHHHHCCCEEeeeccC-------C-CCCcEEEEEEec
Confidence 99999999999999999999999999988 57999999999999876421 1 123456777664
|
| >2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-13 Score=121.45 Aligned_cols=124 Identities=18% Similarity=0.251 Sum_probs=95.1
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC--cc-CCHHHHHhhc-------C-cEEEEEECCeEEEEEEEeeec---CCCe
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL-------D-SFYVVEREGQIIACAALFPFF---KEKC 404 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~-~s~~~~~~~l-------~-~~~v~~~dg~IVG~~~l~~~~---~~~~ 404 (500)
.+.||+++++|++.+.+++......... .+ .+.+.+...+ . .++++..++++||++.+.... ....
T Consensus 7 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 86 (177)
T 2vi7_A 7 TIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHS 86 (177)
T ss_dssp CEEEEECCGGGHHHHHHHHTSHHHHTTSSCCSSCCHHHHHHHHTTC-CCTTEEEEEEEETTEEEEEEEEEECSSGGGTTE
T ss_pred cEEEEECCHHHHHHHHHHHhChhhhcccccCCCCCHHHHHHHHhhhcccCCcEEEEEEECCEEEEEEEEecCCccccceE
Confidence 4579999999999999998764332221 11 1333333322 1 356778899999999987543 1345
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+++ .++|+|+|||||+|+.|++.+++++++. ++++|.+.+ .+|++||+|+||+..+..
T Consensus 87 ~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~GF~~~g~~ 149 (177)
T 2vi7_A 87 GSI-GMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEM 149 (177)
T ss_dssp EEC-TTCCEESSTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeee
Confidence 666 7899999999999999999999999986 599999988 479999999999998754
|
| >3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.45 E-value=6.8e-13 Score=118.79 Aligned_cols=124 Identities=18% Similarity=0.187 Sum_probs=94.3
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC--cc-CCHHHHHhhc--------CcEEEEE-ECCeEEEEEEEeeec-CCCeE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL--------DSFYVVE-REGQIIACAALFPFF-KEKCG 405 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~-~s~~~~~~~l--------~~~~v~~-~dg~IVG~~~l~~~~-~~~~~ 405 (500)
.+.||+++++|++.+.+++.+.....+. .+ .+.+....++ ..+|++. .++++||++.+.... ....+
T Consensus 6 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 85 (170)
T 3tth_A 6 KIRLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRC 85 (170)
T ss_dssp CCEEEECCGGGHHHHHHHHTC--CCEEETTEEECSHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEEEEETTTTEE
T ss_pred cEEEeeCCHHHHHHHHHHHcCHHHHHhhccCCcccHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEEecccccceE
Confidence 4679999999999999997654332211 11 2333333322 2466776 789999999987543 34567
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++ .++|+|+|||+|+|+.|+..+++++++. |++.+.+.+ ..+++||+|+||+..+..
T Consensus 86 ~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~g~~ 147 (170)
T 3tth_A 86 EF-AIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKL 147 (170)
T ss_dssp EE-EEEECTTSCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred EE-EEEECccccCCCHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHCCCeEEEEE
Confidence 77 6899999999999999999999999775 999999988 479999999999998853
|
| >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.8e-13 Score=121.65 Aligned_cols=129 Identities=9% Similarity=0.030 Sum_probs=99.3
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCc----cCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec-----C
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----K 401 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~----~~s~~~~~~~l------~~~~v~~~dg~IVG~~~l~~~~-----~ 401 (500)
+..+.||+++++|++.+.+++.......+.. +.+.+.+...+ ..++++..++++||++.+.... .
T Consensus 12 ~~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 91 (182)
T 3f5b_A 12 EFRFCFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYP 91 (182)
T ss_dssp CCCEEEEECCGGGHHHHHHHTTSHHHHTTSCHHHHHHHHHHHHHHHTTSCCSSEEEEEEETTEEEEEEEEEEECSCSSCT
T ss_pred cceEEEEECCHHHHHHHHHHHcCchhhhhccCCCccccHHHHHHHHhcCCCCeEEEEEEeCCCcEEEEEEeccccccccC
Confidence 3446899999999999988755433332221 11333444433 3578888999999999997542 2
Q ss_pred CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 402 ~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
....++..++|+|+|||+|+|+.|++.+++++. .|++.+.+.+ ..+++||+|+||+..+....+
T Consensus 92 ~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~-~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 159 (182)
T 3f5b_A 92 DGAVTLDLFICRLDYIGKGLSVQMIHEFILSQF-SDTKIVLINPEISNERAVHVYKKAGFEIIGEFIAS 159 (182)
T ss_dssp TCEEEEEEEECSGGGCCHHHHHHHHHHHHHHHC-TTCSEEEECCBTTCHHHHHHHHHHTCEEEEEEEET
T ss_pred CCceEEEEEEEChhhcCCchHHHHHHHHHHHhh-CCCCEEEEecCcCCHHHHHHHHHCCCEEEeEEecC
Confidence 356899999999999999999999999999995 4899999988 479999999999999876433
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=9.1e-14 Score=123.88 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=89.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc------CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec----CCCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~------~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~----~~~~~ 405 (500)
++||+++++|++.+.+++........ ......+.+...+ ..++++.+++++||++.+.... ....+
T Consensus 27 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 106 (168)
T 1bo4_A 27 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 106 (168)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred heeeeCCHhHHHHHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEEECCeEEEEEEEEeccCccCCCceE
Confidence 46999999999999999864321110 0112333333332 2467778899999999987543 23578
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
+|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 107 ~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~g~ 167 (168)
T 1bo4_A 107 YIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIREEVM 167 (168)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-------
T ss_pred EEEEEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcCCeeccc
Confidence 9999999999999999999999999999999999999988 36899999999998653
|
| >3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.44 E-value=6.7e-13 Score=119.33 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=94.8
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCc--Ccc-CCHHHHHhh----c----CcEEEEE-ECCeEEEEEEEeeecC-CCeE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGA--LVR-RTDEELLKA----L----DSFYVVE-REGQIIACAALFPFFK-EKCG 405 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~--~~~-~s~~~~~~~----l----~~~~v~~-~dg~IVG~~~l~~~~~-~~~~ 405 (500)
.+.||+++++|++.+.+++.+.....+ ..+ .+.+..... + ..++++. .++++||++.+..... ...+
T Consensus 7 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 86 (176)
T 3eg7_A 7 QLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSA 86 (176)
T ss_dssp TCEEEECCGGGHHHHHHHHTTTCSCEEETTEEECSHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEEEEETTTTEE
T ss_pred eEEEeeCCHHHHHHHHHHHcCHHHHhhhccccccCHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEEecCcccCce
Confidence 467999999999999999764322111 111 133333322 2 2467777 7899999999986543 4567
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++ .++|+|+|||+|+|+.|++.+++++++. |++.+.+.+ ..+++||+|+||+..+..
T Consensus 87 ~~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 148 (176)
T 3eg7_A 87 EF-QIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHL 148 (176)
T ss_dssp EE-EEEECGGGTTSSCHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EE-EEEECHHHhCCCHHHHHHHHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHCCCEEeeee
Confidence 77 5999999999999999999999999885 999999988 479999999999998763
|
| >2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-12 Score=118.89 Aligned_cols=142 Identities=11% Similarity=0.003 Sum_probs=101.0
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-----------CcEEEEE--ECCeEEEEEEEeeecCCCeE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKCG 405 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-----------~~~~v~~--~dg~IVG~~~l~~~~~~~~~ 405 (500)
.+.||+++++|++.+.+++.+........+.+.+.....+ ..++++. .++++||++.+........+
T Consensus 34 ~l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~iG~~~~~~~~~~~~~ 113 (195)
T 2fsr_A 34 RLTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEK 113 (195)
T ss_dssp SEEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSC
T ss_pred cEEEEcCCHHHHHHHHHHHcCCCceecCCCCCHHHHHHHHHHHHhccccCCceEEEEEECCCCCEEEEEeeEecCCCCeE
Confidence 3579999999999999998764441112233333221111 1245544 47899999999865445677
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCce
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 480 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~ 480 (500)
++ .++|+|+|||+|+|+.|+..+++++++ .|++++.+.+ ..+++||+|+||+..+..... ....
T Consensus 114 ~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~----------g~~~ 182 (195)
T 2fsr_A 114 EL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPRS----------DPED 182 (195)
T ss_dssp EE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSCCS----------STTC
T ss_pred EE-EEEEChhHcCCChHHHHHHHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHCCCEEEeeeccC----------CCcc
Confidence 88 789999999999999999999999988 6999999988 579999999999998865322 1234
Q ss_pred EEEEecCCCCC
Q 010815 481 YYMKKLLPDTS 491 (500)
Q Consensus 481 ~~~kkll~~~~ 491 (500)
..+....+++.
T Consensus 183 ~~y~~~~~~w~ 193 (195)
T 2fsr_A 183 LVYRYHQVKTA 193 (195)
T ss_dssp EEEEECC----
T ss_pred eeEEEchhhcC
Confidence 55555555553
|
| >3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.43 E-value=9.4e-13 Score=118.41 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=92.9
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-----------CcEEEEE--ECCeEEEEEEEeeecC----
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFK---- 401 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-----------~~~~v~~--~dg~IVG~~~l~~~~~---- 401 (500)
.+.||+++++|++.+.++ ..........+.+.+....++ ..+|++. .++++||++.+.....
T Consensus 15 ~l~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~ 93 (175)
T 3juw_A 15 RLVLEPQSMARFDQWFAM-ERQRDEAGHRDLTEDQAWLRLCARQGMWDAYACGFYYLLDPVSGEMRGEAGFQFRRRGFGP 93 (175)
T ss_dssp SCEEEECCGGGHHHHHHH-HHHSCSTTTTTCCHHHHHHHHHHHHHHHHHHSCCEEEEECTTTCCEEEEEEEECCCCSSCT
T ss_pred ceEecCCCHHHHHHHHHH-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEEECCCCcEEEEeeeEEeeccccC
Confidence 357999999999999999 222111111344444433322 1245554 3799999999986321
Q ss_pred --CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 402 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 402 --~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
....++ .++|+|+|||+|+|+.|++.+++++++. +++.+.+.+ ..+++||+|+||+..+....
T Consensus 94 ~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 163 (175)
T 3juw_A 94 GFDNHPEA-AWAVASAHQGRGLAAEAMQALLAHHDRSSGRQRVVALIARSNLPSLRLAERLGFRGYSDVAF 163 (175)
T ss_dssp TTTTSCEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHHTSCCEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCCceE-EEEECHHHhCCCHHHHHHHHHHHHHHhCCCCceEEEEECCCChhHHHHHHHcCCeEecceee
Confidence 145666 5899999999999999999999999986 899999888 47999999999999987644
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-13 Score=125.06 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=94.3
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHH-HhhcCcEEEEEE-CCeEEEEEEEeeec-CCCeEEEEEEEEcc
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL-LKALDSFYVVER-EGQIIACAALFPFF-KEKCGEVAAIGVSP 414 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~-~~~l~~~~v~~~-dg~IVG~~~l~~~~-~~~~~~I~~l~V~p 414 (500)
+.+.||+++.+|++.+.+++...+.......+..... ...-..++++.. ++++||++.+.... .....++..++|+|
T Consensus 25 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~i~~l~V~p 104 (189)
T 3d3s_A 25 LRYHLRPPRRNDGAAIHQLVSECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVAVHS 104 (189)
T ss_dssp -CCEEECCCGGGHHHHHHHHHTSTTSCCCCHHHHHHHHHHCGGGCEEEECTTSCEEEEEEEEECSSCTTEEEEEEEEECG
T ss_pred CCEEEEECChhHHHHHHHHHHHccccCchhhHHHHHhccCCCceEEEEECCCCEEEEEEEEEEcCCCCCceEEEEEEECH
Confidence 4467999999999999999866422111111111111 111235677888 89999999988653 34678999999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
+|||+|+|+.|++++++++++.|++.+.+.+ ..+++||+|+||+..+
T Consensus 105 ~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~~ 155 (189)
T 3d3s_A 105 RARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTFAGLAGERGA 155 (189)
T ss_dssp GGTTSCHHHHHHHHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTTC
T ss_pred HHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCcccc
Confidence 9999999999999999999999999999888 4799999999998654
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-13 Score=125.59 Aligned_cols=122 Identities=18% Similarity=0.236 Sum_probs=95.2
Q ss_pred ccccccCCcccHHH-HHHHHHHHHHcCcCccCCHHHHHhhc-------C--cEEEEE-ECCeEEEEEEEeeec-----CC
Q 010815 339 YEGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------D--SFYVVE-REGQIIACAALFPFF-----KE 402 (500)
Q Consensus 339 ~~~iR~a~~~D~~~-I~~L~~~~~~~~~~~~~s~~~~~~~l-------~--~~~v~~-~dg~IVG~~~l~~~~-----~~ 402 (500)
.+.||+++.+|++. +.+++...+.. ..++.+.+...+ . .++++. .++++||++.+.... ..
T Consensus 47 ~~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~ 123 (190)
T 2vez_A 47 DYTIRPLCRSDYKRGYLDVLRVLTTV---GDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLG 123 (190)
T ss_dssp TCEEEECCGGGGGGTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTTTTEEEEEEECTTSCEEEEEEEEEEECSHHHHC
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhcc---cCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCcEEEEEEEEeccccccCCC
Confidence 35799999999999 99997654322 234444443321 1 345555 479999999987532 34
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 124 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 185 (190)
T 2vez_A 124 MVGHIEDIAVEKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLE 185 (190)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHTTCCCCCCC
T ss_pred ceEEEEEEEEchhhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHCCCeehHHh
Confidence 6789999999999999999999999999999999999999987 456799999999987654
|
| >3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.2e-12 Score=115.85 Aligned_cols=126 Identities=6% Similarity=-0.002 Sum_probs=97.5
Q ss_pred ccccccccCCcccHHHHHHHHHHH---HHcCcC--cc-CCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeee
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPL---VESGAL--VR-RTDEELLKAL-----------DSFYVVEREGQIIACAALFPF 399 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~---~~~~~~--~~-~s~~~~~~~l-----------~~~~v~~~dg~IVG~~~l~~~ 399 (500)
...+.||+++++|++.+.+++.+. ...... .. .+.+....++ ..++++..++++||++.+...
T Consensus 19 ~~~l~lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~ 98 (188)
T 3r9f_A 19 NDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNII 98 (188)
T ss_dssp SSSEEEECCCGGGHHHHHHHHHHHHHHHHTTCSGGGGCCSHHHHHHHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEeCCHHHHHHHHHHHhcChHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhhccCeEEEEEEECCEEEEEEEEEEe
Confidence 344679999999999999998752 111111 11 3444443332 236777889999999999754
Q ss_pred c-CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 ~-~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
. ....++++ ++|+|+|||+|+|+.|+..+++++.+. |++++.+.+ .+|++||+|+||+..+..
T Consensus 99 ~~~~~~~~i~-~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 167 (188)
T 3r9f_A 99 DHANKTAYIG-YWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVL 167 (188)
T ss_dssp ETTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEE-EEEChhhcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecCCCHHHHHHHHHCCCeEEeEe
Confidence 3 35678885 689999999999999999999999876 999999988 579999999999998754
|
| >4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=123.17 Aligned_cols=128 Identities=16% Similarity=0.111 Sum_probs=94.8
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC---------ccCCHHH----HHhhc--CcEEEEEE-CCeEEEEEEEeeec--
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL---------VRRTDEE----LLKAL--DSFYVVER-EGQIIACAALFPFF-- 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~---------~~~s~~~----~~~~l--~~~~v~~~-dg~IVG~~~l~~~~-- 400 (500)
.++||+++++|++.+.+++.+.+....+ .....+. +...+ ...+++.+ +|+|||++......
T Consensus 8 ~~~iR~a~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~ 87 (222)
T 4fd5_A 8 NIRFETISSKYYDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGVALNGILYGN 87 (222)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHTTTTSHHHHHTTCCCTTTCCHHHHHHHHHHHTTSCCEEEECTTSCEEEEEEEEEEETT
T ss_pred CEEEEECCHHHHHHHHHHHHHhcCCCCccchhhcccCCCcccHHHHHHHHHHHhCCcEEEEEeCCCCEEEEEEeccccCC
Confidence 4679999999999999998775422111 0111111 22222 23444444 79999999865432
Q ss_pred ---------------------------------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 010815 401 ---------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441 (500)
Q Consensus 401 ---------------------------------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I 441 (500)
.+..++|..++|+|+|||+|+|+.|++++++++++.|++.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~~ 167 (222)
T 4fd5_A 88 TDIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSVDSRFRGKGLAKKLIEKSEELALDRGFQVM 167 (222)
T ss_dssp SCTTHHHHHHHHCCCHHHHHHHHHHHHHHTTCCHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHhhccChhHHHHHHHHHHHHhhcchhhhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEE
Confidence 13467899999999999999999999999999999999988
Q ss_pred EEEc--HHHHHHHHhCCCeEeceeccc
Q 010815 442 FLLT--TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 442 ~l~~--~~a~~fYek~GF~~~~~~~lp 466 (500)
.+.+ ..+++||+|+||+..+...+.
T Consensus 168 ~~~~~~~~~~~~y~~~Gf~~~~~~~~~ 194 (222)
T 4fd5_A 168 KTDATGAFSQRVVSSLGFITKCEINYT 194 (222)
T ss_dssp EEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEEchh
Confidence 7776 578999999999999866544
|
| >3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-12 Score=116.53 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=93.5
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC--ccCC--HHHHHhh-c----C-cEEEEE---ECCeEEEEEEEeeecCCCe
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT--DEELLKA-L----D-SFYVVE---REGQIIACAALFPFFKEKC 404 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~~s--~~~~~~~-l----~-~~~v~~---~dg~IVG~~~l~~~~~~~~ 404 (500)
..+.||+++++|++.+.+++.+.....+. .+.+ .+.+... + . .++++. .++++||++.+.......
T Consensus 12 ~~i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~- 90 (164)
T 3eo4_A 12 SKIIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQLNTDN- 90 (164)
T ss_dssp CEEEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECTTSSS-
T ss_pred CcEEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEecCCCc-
Confidence 34679999999999999998553322211 1112 2233332 1 2 244444 678999999998654444
Q ss_pred EEEEEEEEcc-CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 405 GEVAAIGVSP-ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 405 ~~I~~l~V~p-~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+++ .++|.| +|||+|+|+.|+..+++++++.|++.+.+.+ .++++||+|+||+..+..
T Consensus 91 ~~i-~~~v~~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 153 (164)
T 3eo4_A 91 PEI-GILIGEFFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKG 153 (164)
T ss_dssp CEE-EEEECSTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred EEE-EEEEcCHHHcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeee
Confidence 777 788898 9999999999999999999889999999988 579999999999998765
|
| >1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-12 Score=115.76 Aligned_cols=124 Identities=13% Similarity=0.075 Sum_probs=95.0
Q ss_pred ccccccCCcccHHHHHHHHHHHHHc--CcC----ccCCHHHHHh-hc-----------CcEEEEEECCeEEEEEEEeeec
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVES--GAL----VRRTDEELLK-AL-----------DSFYVVEREGQIIACAALFPFF 400 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~--~~~----~~~s~~~~~~-~l-----------~~~~v~~~dg~IVG~~~l~~~~ 400 (500)
.+.||+++++|++.+.+++...... .+. .+.+.+.... .+ ..++++..++++||++.+....
T Consensus 10 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~ 89 (184)
T 1nsl_A 10 HITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLD 89 (184)
T ss_dssp SEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHcCHHHHhhcccccCCCCCHHHHHHHHHHHHHHhhhccCceEEEEEECCEEEEEEEEEecc
Confidence 4679999999999999998753211 111 1234443333 22 3567888899999999997543
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~-~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....+++ .++|+|+|||+|+|+.|+..+++++. +.|++.+.+.+ ..+++||+|+||+..+..
T Consensus 90 ~~~~~~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 157 (184)
T 1nsl_A 90 QVNRKAEI-GYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKA 157 (184)
T ss_dssp TTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred cccCeEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecCCHHHHHHHHHcCCEEEEEe
Confidence 3456777 46999999999999999999999995 57999999988 478999999999998765
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=128.70 Aligned_cols=122 Identities=16% Similarity=0.215 Sum_probs=95.6
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEee--ecCCCeEEEEEEEEc
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFP--FFKEKCGEVAAIGVS 413 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~--~~~~~~~~I~~l~V~ 413 (500)
..+.||+++++|++.+.+++.+.... ...|....+...+ ..++++..++++||++.+.. ......+.+ .++|+
T Consensus 139 ~~i~IR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~g~iVG~~~~~~~~~~~~~~~~~-~l~V~ 215 (276)
T 3iwg_A 139 EMIDMQIAGTEQLTAFVTFAAANIGA--PEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQYQTEYADL-GMIVA 215 (276)
T ss_dssp CCCCCEECCGGGHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSCTTEEEE-EEEEC
T ss_pred CceEEEECCHHHHHHHHHHHHHhhcC--cHHHHHHHHHhhccCCeEEEEEECCEEEEEEEEEeccccCCcceEE-EEEEC
Confidence 44689999999999999999877655 2222222222222 46788889999999999664 223344555 59999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|+|||+|+|+.|++++++++++.|++.+. .+ ..+++||+|+||+..+..
T Consensus 216 p~~RGkGiG~~Ll~~l~~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~~~~l 268 (276)
T 3iwg_A 216 QSNRGQGIAKKVLTFLTKHAATQGLTSIC-STESNNVAAQKAIAHAGFTSAHRI 268 (276)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEEEEEE
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEEeeEE
Confidence 99999999999999999999999999988 66 579999999999997643
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-12 Score=114.87 Aligned_cols=107 Identities=17% Similarity=0.312 Sum_probs=84.5
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCe
Q 010815 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 458 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~ 458 (500)
.++++..++++||++.+.........++..++|+|+|||+|+|+.|++++++++++.|++.+.+.. +.+.+||+|+||+
T Consensus 48 ~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~Gf~ 127 (160)
T 1qst_A 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFT 127 (160)
T ss_dssp EEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHTTCB
T ss_pred eEEEEecCCEEEEEEEEEEecCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEeCcchhHHHHHHCCCE
Confidence 356667788999999998766566788999999999999999999999999999999999887554 4689999999999
Q ss_pred EeceeccchhhhhhhcccCCceEEEEecCC
Q 010815 459 ECSIEMIPEERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 459 ~~~~~~lp~~~~~~~~~~~~s~~~~kkll~ 488 (500)
..+.. +......+.......++|.+.+.
T Consensus 128 ~~~~~--~~~~~~~~~~~~~~~~~m~~~l~ 155 (160)
T 1qst_A 128 KEHRM--PQEKWKGYIKDYDGGTLMECYIH 155 (160)
T ss_dssp SSCSS--CHHHHTTTSCCCSSSEEEEEECC
T ss_pred Eeeee--ccccceeEEecCCCceEEeeecc
Confidence 87654 33333344334456677777663
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.5e-12 Score=127.20 Aligned_cols=120 Identities=14% Similarity=0.102 Sum_probs=96.8
Q ss_pred cccccccccCCcccHHHHHHHHHHHHHcCcCccCCHH-------HHHh-hcCcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 010815 336 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------ELLK-ALDSFYVVEREGQIIACAALFPFFKEKCGEV 407 (500)
Q Consensus 336 ~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~-------~~~~-~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I 407 (500)
+++.++||+++++|++.+.+|+.+ ...+ +...+ .+.. .-..+++++.++++||++.+.... ..++|
T Consensus 16 ~~~~~~iR~~~~~D~~~i~~l~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~--~~~~i 89 (288)
T 3ddd_A 16 YFQGMIIRYATPDDIEDMVSIFID--AYNF--PGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFFYN--KQAWI 89 (288)
T ss_dssp CSTTCEEEECCGGGHHHHHHHHHH--HHTC--CSCHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEEEEEECS--SEEEE
T ss_pred CCCCcEEEECCHHHHHHHHHHHHh--ccCC--CCchhhhHHHHHHHHhCCCCEEEEEEECCEEEEEEEEEEEC--CEEEE
Confidence 455678999999999999999874 1223 22222 1111 224678889999999999988654 78999
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
..++|+|+|||||+|+.|+++++++++ .+++.+.+.+ ..+.+||+|+||+..+.
T Consensus 90 ~~~~V~p~~rg~Gig~~Ll~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~ 144 (288)
T 3ddd_A 90 GLMGVKKAYQRRGIGTEVFRRLLEIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYR 144 (288)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHHHHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEE
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHH-cCCcEEEEEeCHHHHHHHHHCCCEEece
Confidence 999999999999999999999999999 8888888887 57899999999998764
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.4e-13 Score=121.49 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=87.6
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC--ccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 411 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~~s~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~ 411 (500)
.++||+++.+|.+.+.++...... .++ .....+.+...+ ..++++..++++||++.+... ...++|..++
T Consensus 4 ~~~ir~~~~~d~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~ 80 (181)
T 3ey5_A 4 MIRFQPITTSDVQHYKFMEELLVE-SFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDF--DEFYYVEHFA 80 (181)
T ss_dssp -CEEEECCTTSHHHHHHHHHHHHH-HSCGGGSCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC--SSCEEEEEEE
T ss_pred ceEEEECccccHHHHHHHHHHHHH-hCCccccchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEEEc--CCeEEEEEEE
Confidence 467999999999777776554322 222 222333333332 347888999999999999854 4679999999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceec
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~ 464 (500)
|+|+|||+|+|+.|+++++++++...+..+...+ .+|++||+|+||+..+...
T Consensus 81 V~p~~rg~GiG~~Ll~~~~~~a~~~~~l~v~~~~~~~n~~a~~fY~k~GF~~~~~~~ 137 (181)
T 3ey5_A 81 TNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEKDY 137 (181)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHCCSCEEEEECCTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EchhhcCCCHHHHHHHHHHHhhhhCeEEEEeCCCccchHHHHHHHHHCCCEECCccc
Confidence 9999999999999999999999732222222211 2479999999999998443
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.9e-13 Score=121.69 Aligned_cols=125 Identities=14% Similarity=0.189 Sum_probs=89.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC--ccCC------HHHHH----hhc--CcEEE-EEECCeEEEEEEEeee-----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT------DEELL----KAL--DSFYV-VEREGQIIACAALFPF----- 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~~s------~~~~~----~~l--~~~~v-~~~dg~IVG~~~l~~~----- 399 (500)
+.||+++++|++.+.+++...+....+ .... ...+. ..+ ...++ ++.++++||++...+.
T Consensus 2 ~~ir~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ivG~~~~~~~~~~~~ 81 (197)
T 3qb8_A 2 YTLIKLTSEYTSRAISFTSRNFVASEPTSIALKLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYEN 81 (197)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEECTTCCEEEEEEEEEHHHHHT
T ss_pred cEEEECCHHHHHHHHHHHHHhccccCcHHHHhCCCcchHHHHHHHHHHHHHhcCceEEEEcCCCCEEEEEEecCCcccch
Confidence 479999999999999998654322111 0001 11111 111 23444 4778999999654432
Q ss_pred --cC---CC-----------e--EEEE---EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCC
Q 010815 400 --FK---EK-----------C--GEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRG 456 (500)
Q Consensus 400 --~~---~~-----------~--~~I~---~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~G 456 (500)
+. .. . .+|. .++|+|+|||+|+|+.|++++++++++.|+..+.+.+ ..+++||+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~~y~k~G 161 (197)
T 3qb8_A 82 MHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHG 161 (197)
T ss_dssp CCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHCC
Confidence 00 01 1 4455 8999999999999999999999999999999999988 57899999999
Q ss_pred CeEeceec
Q 010815 457 FRECSIEM 464 (500)
Q Consensus 457 F~~~~~~~ 464 (500)
|+..+...
T Consensus 162 F~~~~~~~ 169 (197)
T 3qb8_A 162 FETVGSVK 169 (197)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99998764
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=119.26 Aligned_cols=118 Identities=25% Similarity=0.325 Sum_probs=92.4
Q ss_pred cccccCCcccH-----HHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeec---CC---CeEE
Q 010815 340 EGTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF---KE---KCGE 406 (500)
Q Consensus 340 ~~iR~a~~~D~-----~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~---~~---~~~~ 406 (500)
++||+++.+|+ +.+.+++...+. ...+.+.+...+ ..+++ ..++++||++.+.... .. ..++
T Consensus 6 ~~ir~~~~~D~~~~~~~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~v-~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 80 (181)
T 1m4i_A 6 HTARLVHTADLDSETRQDIRQMVTGAFA----GDFTETDWEHTLGGMHALI-WHHGAIIAHAAVIQRRLIYRGNALRCGY 80 (181)
T ss_dssp TCCEEEEGGGCCHHHHHHHHHHHHHHTT----TCCCHHHHHHTCSSEEEEE-EETTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEECChHHcchhHHHHHHHHHHHHcc----cccCHHHHHhhcCCcEEEE-EECCEEEEEEEEEEeccccCCCCcceeE
Confidence 57999999999 988888765442 234456666555 34667 8899999999987543 22 5678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
|..++|+|+|||+|+|+.|++++++++++ ++....... ..+.+||+|+||+..+..
T Consensus 81 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~GF~~~~~~ 137 (181)
T 1m4i_A 81 VEGVAVRADWRGQRLVSALLDAVEQVMRG-AYQLGALSSSARARRLYASRGWLPWHGP 137 (181)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHH-HCSEEEEECCTTTHHHHHHTTCEECCSC
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHh-CcEEEEecCCHHHHHHHHhcCCEEcCCc
Confidence 99999999999999999999999999998 555444443 578999999999998753
|
| >3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=121.29 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=93.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC------ccCC--HH-HHHhhc--CcEEEE-EECCeEEEEEEEeeec-----
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL------VRRT--DE-ELLKAL--DSFYVV-EREGQIIACAALFPFF----- 400 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~------~~~s--~~-~~~~~l--~~~~v~-~~dg~IVG~~~l~~~~----- 400 (500)
+.++||+++++|++++.+++.+.+....+ .... .. .+...+ ...+++ +.+|+|||++......
T Consensus 5 ~~~~iR~a~~~D~~~i~~~~~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~~~ 84 (215)
T 3te4_A 5 SPYTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPD 84 (215)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTCCSCHHHHHHHHTTGGGSCCEEEEETTSCEEEEEEEEEEECCCTT
T ss_pred CcEEEEECCHHHHHHHHHHHHHhcCCCCCchhhcCCCCchHHHHHHHHHHhCCcEEEEEcCCCcEEEEEecccccCcchh
Confidence 44689999999999999998765422111 1111 11 112222 233444 4689999998654311
Q ss_pred ------------------------------------CCC-eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 010815 401 ------------------------------------KEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443 (500)
Q Consensus 401 ------------------------------------~~~-~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l 443 (500)
... ..+|..++|+|+|||+|+|+.|++++++++++.|++.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~ 164 (215)
T 3te4_A 85 DVPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHV 164 (215)
T ss_dssp CCCCCGGGGCCCHHHHHHHHHHHHHHHHCCHHHHCTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHhhccCccHHHHHHHHHHHhhccCHHHhCCCCCeEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 112 7899999999999999999999999999999999999988
Q ss_pred Ec--HHHHHHHHhCCCeEeceeccc
Q 010815 444 LT--TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 444 ~~--~~a~~fYek~GF~~~~~~~lp 466 (500)
.+ ..+.+||+|+||+..+...+.
T Consensus 165 ~~~~~~~~~~y~~~Gf~~~~~~~~~ 189 (215)
T 3te4_A 165 LCSSHYSARVMEKLGFHEVFRMQFA 189 (215)
T ss_dssp EESSHHHHHHHHHTTCEEEEEECGG
T ss_pred EecCHHHHHHHHHCCCEEEEEEEhh
Confidence 77 478999999999998866443
|
| >1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=6.1e-12 Score=115.82 Aligned_cols=125 Identities=12% Similarity=0.026 Sum_probs=94.7
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC---ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeec-CCCeEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCGE 406 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~---~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~-~~~~~~ 406 (500)
..+.||+++++|++.+ +++......... .....+.+.... ...+++..++++||++.+.... ....++
T Consensus 20 ~~i~lr~~~~~D~~~l-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~~~~~~ 98 (197)
T 1yre_A 20 GALRLEPLVEADIPEL-VSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACE 98 (197)
T ss_dssp TTEEEEECCGGGHHHH-HHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred CcEEEecCChhhHHHH-HhhcChhhhhccCCCchhHHHHHHHHHHhhccCCeEEEEEEECCeEEEEEEEEeecCCcCeeE
Confidence 3467999999999999 998543221111 111222222211 1356666899999999997543 346789
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++.++|+|+|||+|+|+.|+..+++++++ .|++.+.+.+ ..+++||+|+||+..+..
T Consensus 99 i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 160 (197)
T 1yre_A 99 IGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 160 (197)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEECHhHhcCCHHHHHHHHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCeeeeee
Confidence 98889999999999999999999999998 7999999988 579999999999998764
|
| >3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-12 Score=118.75 Aligned_cols=127 Identities=13% Similarity=0.051 Sum_probs=98.2
Q ss_pred ccccccccCCcc-cHHHHHHHHHHHHH-cCc---CccCCHHHHHhhc--------CcEEEEE--ECCeEEEEEEEeeec-
Q 010815 337 DLYEGTRTAKVT-DLSGIKQIIQPLVE-SGA---LVRRTDEELLKAL--------DSFYVVE--REGQIIACAALFPFF- 400 (500)
Q Consensus 337 d~~~~iR~a~~~-D~~~I~~L~~~~~~-~~~---~~~~s~~~~~~~l--------~~~~v~~--~dg~IVG~~~l~~~~- 400 (500)
...+.||+++.+ |.+.+.+++..... ..+ ....+.+.+..++ ..+|++. .++++||++.+....
T Consensus 36 ~~~l~lr~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~ 115 (209)
T 3pzj_A 36 GEAVSLQPLDAPRHGAALFRLFAGDDSHWEHLPYGPFEDEDAFITWLALTVAQSDTALYVVCAKDSDQALGFLGYRQMVQ 115 (209)
T ss_dssp CSSEEEEECCHHHHHHHHHHHHHTCGGGGTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEEEEETTCCCCCEEEEEEEEEG
T ss_pred CCeEEEEECCcccCHHHHHHHHcCCHHHHhhCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEECCCCcEEEEEEeeeecC
Confidence 344689999999 99999998874311 111 1223445444433 2355555 379999999996543
Q ss_pred CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 ~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....++|+.++|+|+|||+|+|+.|+..+++++++.|+++|.+.+ ..+++||+|+||+..+..
T Consensus 116 ~~~~~ei~~~~v~~~~~g~Gig~~ll~~l~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 182 (209)
T 3pzj_A 116 AHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFELGYRRCEWRCDSRNAASAAAARRFGFQFEGTL 182 (209)
T ss_dssp GGTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred cCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHcCCcEEEEeecCCCHHHHHHHHHCCCEEeeee
Confidence 356789988889999999999999999999999999999999988 579999999999998754
|
| >2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.6e-12 Score=113.54 Aligned_cols=125 Identities=11% Similarity=0.026 Sum_probs=93.8
Q ss_pred cccccccCCcccHHHHHHH-HHHHHHcCc----CccCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEeee
Q 010815 338 LYEGTRTAKVTDLSGIKQI-IQPLVESGA----LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPF 399 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L-~~~~~~~~~----~~~~s~~~~~~~l-----------~~~~v~~~--dg~IVG~~~l~~~ 399 (500)
..+.||+++++|.+.+.++ +.......+ ....+.+....++ ...+++.. ++++||++.+...
T Consensus 13 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~ 92 (181)
T 2fck_A 13 QRLQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEF 92 (181)
T ss_dssp SSEEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEE
T ss_pred CcEEEEECchhhHHHHHHHHhCCHhHhcccCcCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEEEECCCCcEEEEEEEEEe
Confidence 3457999999999999999 554222111 1233444433332 23566655 8999999999754
Q ss_pred c-CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 ~-~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
. .....++ .++|+|+|||+|+|+.|+..+++++++. |++.+.+.+ ..+++||+|+||+..+..
T Consensus 93 ~~~~~~~~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 161 (181)
T 2fck_A 93 YHTFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 161 (181)
T ss_dssp EGGGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cccCCeEEE-EEEEChhhcCCChHHHHHHHHHHHHHHhcCceEEEEEEccCCHHHHHHHHHcCCEEEEEE
Confidence 3 3456777 6799999999999999999999999985 999999988 578999999999998754
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.6e-12 Score=111.30 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=87.8
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCc--CccCCHHHHHhhc------CcEEEEEEC-CeEEEEEEEeeecCCCeEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFKEKCGEVA 408 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~--~~~~s~~~~~~~l------~~~~v~~~d-g~IVG~~~l~~~~~~~~~~I~ 408 (500)
|.+.||+++++|++.+.+++.+...... ..+.+.+.+...+ ..++++..+ +++||++.+.. .++.
T Consensus 1 M~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~------~~i~ 74 (147)
T 2kcw_A 1 MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSG------QHMD 74 (147)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTTTTSCCEEEEETTSCEEEEEEEET------TEEE
T ss_pred CeEEEecCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHhhCCCCcEEEEEcCCCCEEEEEEEec------ceec
Confidence 3467999999999999999877544322 1121222222221 246777777 99999999872 5688
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCeEeceecc
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~~~~~~~l 465 (500)
.++|+|+|||+|+|+.|+++++++++. -.+.+.. ..+.+||+|+||+..+....
T Consensus 75 ~~~v~p~~rg~Gig~~ll~~~~~~~~~---~~~~v~~~N~~a~~~y~k~Gf~~~~~~~~ 130 (147)
T 2kcw_A 75 ALFIDPDVRGCGVGRVLVEHALSMAPE---LTTNVNEQNEQAVGFYKKVGFKVTGRSEV 130 (147)
T ss_dssp EEEECHHHHTTTHHHHHHHHHHHHCTT---CEEEEETTCHHHHHHHHHHTEEEEEECSS
T ss_pred cEEECHHHhCCCHHHHHHHHHHHhccc---eEEEEecCChHHHHHHHHCCCEEeceeee
Confidence 999999999999999999999999843 2333333 57999999999999887643
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-11 Score=110.90 Aligned_cols=145 Identities=12% Similarity=0.164 Sum_probs=97.1
Q ss_pred cccccCCcccHHHHHHHHH---HHHHcCcCccCCHHHHHhhc----C-cEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL----D-SFYVVEREGQIIACAALFPFFKEKCGEVAAIG 411 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~---~~~~~~~~~~~s~~~~~~~l----~-~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~ 411 (500)
++||+++.+|.+....... ..+...++ ..+.+.+...+ . .++++..++++||++.+.........++..++
T Consensus 2 i~~r~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~l~ 80 (164)
T 1ygh_A 2 IEFRVVNNDNTKENMMVLTGLKNIFQKQLP-KMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCA 80 (164)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred eeEEEecCCCchhhHHHHHHHHHHHHhhcc-cCCHHHHHHHhhCCCceEEEEECCCCEEEEEEEEEEcCCCCceEEEEEE
Confidence 4577776666554444332 23333332 22333333322 2 24667778999999999876555678888999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
|+|+|||+|+|+.|++++++++++ .|++.+.+.. +.+.+||+|+||+..+.. +...+..+...-...++|.+-+
T Consensus 81 V~p~~rg~Gig~~ll~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~GF~~~~~~--~~~~~~~~~~~~~~~~~m~~~l 156 (164)
T 1ygh_A 81 ISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEITL--DKSIWMGYIKDYEGGTLMQCSM 156 (164)
T ss_dssp ECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCCS--CHHHHBTTBCCTTCCEEEEEEC
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEecCChHHHHHHHcCCEeccee--ccceEEEEEEEecCeEEEEeec
Confidence 999999999999999999999998 8988544433 478999999999987654 3333333322334556666655
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=5.7e-12 Score=115.91 Aligned_cols=126 Identities=23% Similarity=0.301 Sum_probs=96.0
Q ss_pred ccccccc---CCcccHHHHHHHHHHHHHcCc--------CccCCHHHH------------HhhcCcEEEEEECCeEEEEE
Q 010815 338 LYEGTRT---AKVTDLSGIKQIIQPLVESGA--------LVRRTDEEL------------LKALDSFYVVEREGQIIACA 394 (500)
Q Consensus 338 ~~~~iR~---a~~~D~~~I~~L~~~~~~~~~--------~~~~s~~~~------------~~~l~~~~v~~~dg~IVG~~ 394 (500)
|...||+ ++++|++.+.+++........ +.....+.+ ...-..++++..++++||++
T Consensus 3 mi~~ir~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~ 82 (190)
T 2gan_A 3 GVKKIKNPSTVKDELLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLKFRLSQEFDELYTYQKDNRIIGTI 82 (190)
T ss_dssp EEEECSSGGGGHHHHHHHHHHHHHHTTTCSSCCTTCSSCCCTTCHHHHHHHHHHHHHHHHHTTCSEEEEEEESSCEEEEE
T ss_pred ceeeecCccccchhHhhhHheehhhhcccChHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEE
Confidence 3346899 999999999999876533221 111122222 11224578888899999999
Q ss_pred EEee-ec-------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHH-HHhCCC
Q 010815 395 ALFP-FF-------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADW-FKSRGF 457 (500)
Q Consensus 395 ~l~~-~~-------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~f-Yek~GF 457 (500)
.+.. .. ....++|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.. ..+.+| |+|+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~~y~k~GF 162 (190)
T 2gan_A 83 ALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKGF 162 (190)
T ss_dssp EEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECGGGSHHHHHHHTTTE
T ss_pred EEEecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecCCccccccEEecCCC
Confidence 9985 32 224789999999999999999999999999999999999999864 468999 999999
Q ss_pred eEecee
Q 010815 458 RECSIE 463 (500)
Q Consensus 458 ~~~~~~ 463 (500)
+..+..
T Consensus 163 ~~~~~~ 168 (190)
T 2gan_A 163 REIMRY 168 (190)
T ss_dssp EEEECC
T ss_pred EEeecc
Confidence 998654
|
| >2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A | Back alignment and structure |
|---|
Probab=99.35 E-value=3.8e-12 Score=112.30 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=93.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHH--hhcCcEEEEEECCeEEEEEEEeeec--CCCeEEEEEEEEccC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVEREGQIIACAALFPFF--KEKCGEVAAIGVSPE 415 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~--~~l~~~~v~~~dg~IVG~~~l~~~~--~~~~~~I~~l~V~p~ 415 (500)
+.||+++++|++.+.+|+.. +. .+.+.+. ..-..++|++.+++++|++.+.+.. +...+++..++
T Consensus 1 m~IR~a~~~D~~~l~~L~~~---~~----~~~~~L~~~~~~~~~fVAe~~g~ivG~v~l~~~i~gdg~~~~L~dl~---- 69 (141)
T 2d4p_A 1 MRFRPFTEEDLDRLNRLAGK---RP----VSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRIE---- 69 (141)
T ss_dssp CEEECCCGGGHHHHHHTSTT---SC----CCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEEE----
T ss_pred CeEEECCHHHHHHHHHHHcc---Cc----chHHHHHhcCCCCeEEEEEECCEEEEEEeeeeEEEcCCeEEEEeHHh----
Confidence 35999999999999999643 11 4555555 5667899999999999988876533 44667898988
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
||++|||+.|+++++++|++.|+.++.+.+ ..++.||+++||...+
T Consensus 70 ~R~~GIG~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~~~ 119 (141)
T 2d4p_A 70 GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALGP 119 (141)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCCS
T ss_pred hccccHHHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHCCCEecC
Confidence 999999999999999999999999999988 5799999999999876
|
| >2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=8.6e-12 Score=114.65 Aligned_cols=124 Identities=8% Similarity=-0.031 Sum_probs=93.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC---ccCCH-HHHHhhc--------CcEEEEEECCeEEEEEEEeeec-CCCe
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTD-EELLKAL--------DSFYVVEREGQIIACAALFPFF-KEKC 404 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~---~~~s~-~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~-~~~~ 404 (500)
+.+.||+++++|++.+.++ .......+. .+.+. +....++ ..+|++..++++||++.+.... ....
T Consensus 11 ~~~~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~~~~~~~~~ 89 (194)
T 2z10_A 11 RHVRLEPLALAHLPAFLRH-YDPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPEPEHAK 89 (194)
T ss_dssp SSEEEEECCGGGHHHHHHT-CCHHHHTTSTTCCSSSSHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEEGGGTE
T ss_pred CeEEEeeCCHHHHHHHHHh-cCHHHHHhcCCCCCCChHHHHHHHHHHhhcCCCceEEEEecCCCEEEEEEecccCcccCE
Confidence 3467999999999999998 543322221 12222 3322222 2456778899999999987543 3457
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++++.+++ |+|||+|+|+.|+..+++++++. |++.+.+.+ ..+++||+|+||+..+..
T Consensus 90 ~~i~~~~~-p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 152 (194)
T 2z10_A 90 LELGTMLF-KPFWGSPANKEAKYLLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVL 152 (194)
T ss_dssp EEEEEEEC-GGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEeeEEC-HhHhCCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCcEEEec
Confidence 88877677 99999999999999999999986 999999988 579999999999998764
|
| >1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=4.3e-12 Score=120.01 Aligned_cols=127 Identities=13% Similarity=-0.021 Sum_probs=92.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHH-cCcCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecC-------
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK------- 401 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~-~~~~~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~~------- 401 (500)
+.+.||+++.+|++.+.+++.+... ..+...++.+....++ ..++++..++++||++.+.....
T Consensus 41 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~iG~~~l~~~~~~~~~~~~ 120 (210)
T 1yk3_A 41 PPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYY 120 (210)
T ss_dssp TTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSS
T ss_pred CcEEEEECCHHHHHHHHHHHcChHHHHHhCCCCCHHHHHHHHHHhhcCCcceEEEEEECCEEEEEEEEEccccccccccc
Confidence 3467999999999999999754321 1122234544443322 13567788999999998863211
Q ss_pred ---CCeEEEEEEEEc-cCCcCCcHHHHHHHHHHHHHHH--CCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 402 ---EKCGEVAAIGVS-PECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 402 ---~~~~~I~~l~V~-p~yRG~GiG~~Ll~~l~~~a~~--~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
.....+ .++|. |+|||||+|+.|++.+++++++ .|+.+|.+.+ ..|++||+|+||+..+....
T Consensus 121 ~~~~~~~g~-~~~i~~p~~rGkGiG~~ll~~~~~~a~~~~~g~~~I~l~v~~~N~~A~~lyek~GF~~~g~~~~ 193 (210)
T 1yk3_A 121 DADPYDLGL-HAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDT 193 (210)
T ss_dssp CCCTTCEEE-EEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEEC
T ss_pred CCCCCceEE-EEEEEChhhcCCChHHHHHHHHHHHHHhcCCCCCEEEEecCccCHHHHHHHHHcCCEEeEEEeC
Confidence 112223 45565 9999999999999999999986 7999999988 57999999999999887644
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=113.98 Aligned_cols=118 Identities=16% Similarity=0.219 Sum_probs=87.7
Q ss_pred cccccCC-cccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEE-CCeEEEEEEEeeecCCCeEEEEEEEEcc
Q 010815 340 EGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSP 414 (500)
Q Consensus 340 ~~iR~a~-~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~-dg~IVG~~~l~~~~~~~~~~I~~l~V~p 414 (500)
+.++... +.|.+++.+++ ..+..+.+.+.+...+ ..++++.+ ++++||++.+.. .....++|..++|+|
T Consensus 10 i~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p 83 (145)
T 3s6f_A 10 IQFQTTLEGVTPAQLGGFF-----EGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALS-DGILAASIPLLEVQA 83 (145)
T ss_dssp CEEESSCTTCCGGGSCSCC-----TTCSSCCCHHHHHHHHHHSSEEEEEECTTCCEEEEEEEEE-CSSSEEECCCEEECT
T ss_pred eEEeeccccCCHHHHHHHH-----hcCCCCCCHHHHHHHhccCceEEEEECCCCCEEEEEEEEe-cCCcEEEEEEEEECH
Confidence 4566653 67777777775 2333344555555443 34555666 799999998874 344678999999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceecc
Q 010815 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~l 465 (500)
+|||+|+|+.|+++++++++ +...+.+.+ +.+.+||+|+||+..+....
T Consensus 84 ~~rg~GiG~~Ll~~~~~~~~--~~~~~~l~~~~~a~~fY~k~GF~~~~~~~~ 133 (145)
T 3s6f_A 84 GWRSLGLGSELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMFL 133 (145)
T ss_dssp TSCSSSHHHHHHHHHHHHHC--SCSEEECCCCGGGHHHHHHTTCCCCCCCCC
T ss_pred HHhcCcHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHCCCEECCcEEE
Confidence 99999999999999999996 455666666 57999999999999876533
|
| >2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-11 Score=115.97 Aligned_cols=124 Identities=11% Similarity=0.006 Sum_probs=91.2
Q ss_pred ccccccCCcccHHHHHHHHHHH----HHcCcC----ccCC----HHHHHhhc--------C---cEEEEEECCeEEEEEE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPL----VESGAL----VRRT----DEELLKAL--------D---SFYVVEREGQIIACAA 395 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~----~~~~~~----~~~s----~~~~~~~l--------~---~~~v~~~dg~IVG~~~ 395 (500)
.+.||+++.+|++.+.+++... ....+. ...+ .+.+...+ . .++++..++++||++.
T Consensus 16 ~l~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~ 95 (218)
T 2vzy_A 16 RLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQA 95 (218)
T ss_dssp SEEEECCCHHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHTCBTTEEEEEEEEEETTEEEEEEE
T ss_pred CEEEecCCHHHHHHHHHHHhhcccCccccccccCcCCcCchHHHHHHHHHHHHhhcccCcCCceEEEEEEECCEEEEEEE
Confidence 3579999999999999998621 111111 0011 11111111 1 3566788999999999
Q ss_pred Eeeec--CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 396 LFPFF--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 396 l~~~~--~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+.... ....+++ .++|+|+|||||+|+.|++.+++++++ .|+++|.+.+ ..+++||+|+||+..+..
T Consensus 96 ~~~~~~~~~~~~ei-g~~v~~~~rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 169 (218)
T 2vzy_A 96 LSSKDFPITRQVDS-GSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLD 169 (218)
T ss_dssp EEEESHHHHCEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EeccccCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCceEEEEEeccCCHHHHHHHHHCCCEEeeee
Confidence 98654 2357788 579999999999999999999999998 7999999988 579999999999998764
|
| >2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-11 Score=115.28 Aligned_cols=142 Identities=11% Similarity=0.090 Sum_probs=105.7
Q ss_pred cccccCCccc-HHHHHHHHHHHHH-cCcCcc-CCHHHHHhhcCcEEEEEECCeEEEEEEEeeecC---------------
Q 010815 340 EGTRTAKVTD-LSGIKQIIQPLVE-SGALVR-RTDEELLKALDSFYVVEREGQIIACAALFPFFK--------------- 401 (500)
Q Consensus 340 ~~iR~a~~~D-~~~I~~L~~~~~~-~~~~~~-~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~--------------- 401 (500)
..+|.++.+| .+++++|..+.+- .++..+ ...+........++++..+++++|++.+.....
T Consensus 7 ~~ir~a~~~~~~~~i~~Lr~~~y~e~~~~~~~~~~~~~~~~~~~~~~a~~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~ 86 (198)
T 2g0b_A 7 KVARILVAPNERDAARRIVRTTYEAQGYAIDESFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAA 86 (198)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTSTTEEEEEEEETTEEEEEEEEEECBTTBCTTHHHHHHHHHH
T ss_pred eeEEEeCCHHHHHHHHHHHHHHHHHhccCcccccchhhcCCCcEEEEEEECCEEEEEEEEEeCCCcCCchhhhchhhhhh
Confidence 3488888665 9999999887554 444333 212222223345777889999999999985332
Q ss_pred -----CCeEEEEEEEEccCC--------cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccch
Q 010815 402 -----EKCGEVAAIGVSPEC--------RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 402 -----~~~~~I~~l~V~p~y--------RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~ 467 (500)
...++|..++|+|+| ||+|+|+.|++.++++|++.|++.+++.+ +++++||+++||+..+...+
T Consensus 87 ~~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~~~a~~~g~~~i~levn~ra~~FY~k~GF~~~g~~~f-- 164 (198)
T 2g0b_A 87 WRGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVLTYALETHIDYLCISINPKHDTFYSLLGFTQIGALKH-- 164 (198)
T ss_dssp HHHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEEE--
T ss_pred hhhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHHHHHHHcCCCEEEEEeCHHHHHHHHHCCCEEeeCCcc--
Confidence 258999999999999 99999999999999999999999999977 67899999999999986632
Q ss_pred hhhhhhcccCCceEEEEecCC
Q 010815 468 ERRKRINLSRNSKYYMKKLLP 488 (500)
Q Consensus 468 ~~~~~~~~~~~s~~~~kkll~ 488 (500)
|.....+.+.|..-++
T Consensus 165 -----y~~~g~p~~lm~~~~~ 180 (198)
T 2g0b_A 165 -----YGTVNAPAIARALYVP 180 (198)
T ss_dssp -----ETTTTEEEEEEEEEGG
T ss_pred -----CCCCCcceEeeecCHH
Confidence 1223456666665543
|
| >2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.5e-12 Score=110.44 Aligned_cols=110 Identities=12% Similarity=0.168 Sum_probs=81.1
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 420 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~G 420 (500)
.+++++.+|++.+.+++... ....+ ....-..+++++.+++++|++.+... ...++|..++|+|+|||+|
T Consensus 7 ~i~~~~~~d~~~l~~l~~~~----~~~~~----~~~~~~~~~va~~~~~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~G 76 (128)
T 2k5t_A 7 RLEKFSDQDRIDLQKIWPEY----SPSSL----QVDDNHRIYAARFNERLLAAVRVTLS--GTEGALDSLRVREVTRRRG 76 (128)
T ss_dssp ECSSCCHHHHHHHHHHCTTS----CCCCC----CCCSSEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECTTCSSSS
T ss_pred EehhCCHHHHHHHHHHcccC----CHHHh----EECCCccEEEEEECCeEEEEEEEEEc--CCcEEEEEEEECHHHcCCC
Confidence 36678888888888775221 11112 01111346778889999999998754 3468999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEece
Q 010815 421 QGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSI 462 (500)
Q Consensus 421 iG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~~ 462 (500)
+|+.|+++++++++. +..+.+.+ ..+++||+|+||+..+.
T Consensus 77 iG~~Ll~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~~~~~ 122 (128)
T 2k5t_A 77 VGQYLLEEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQALGFTTQQG 122 (128)
T ss_dssp HHHHHHHHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCEECSS
T ss_pred HHHHHHHHHHHHhhh--CCEEEEeccCccccHHHHHHHHHcCCCcccc
Confidence 999999999999854 55555532 25789999999998765
|
| >2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=115.45 Aligned_cols=128 Identities=14% Similarity=0.058 Sum_probs=93.5
Q ss_pred ccccccCCcccHHHHHHHHHHHHH-cCcCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec--------C
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF--------K 401 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~-~~~~~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~--------~ 401 (500)
.+.||+++++|++.+.+++.+... ..+....+.+....++ ..++++..++++||++.+.... .
T Consensus 21 ~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 100 (198)
T 2qml_A 21 KLSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYP 100 (198)
T ss_dssp EEEEEECCGGGHHHHHHHTTSTTTHHHHCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEGGGSGGGGGSC
T ss_pred cEEEEECCHHHHHHHHHHHcCcchhhhccCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEeccccccccccc
Confidence 467999999999999999754211 0011111444333332 1456778899999999997433 2
Q ss_pred CCeEEEE-EEEEc-cCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 402 EKCGEVA-AIGVS-PECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 402 ~~~~~I~-~l~V~-p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
....++. .++|. |+|||+|+|+.|++.+++++++. |+..|.+.+ ..+++||+|+||+..+....+
T Consensus 101 ~~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 172 (198)
T 2qml_A 101 FEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKEVELP 172 (198)
T ss_dssp CCTTCEEEEEEECSGGGSSSSTHHHHHHHHHHHHHTSTTCCEEEECCBTTCHHHHHHHHHTTCEEEEEEECS
T ss_pred CCCccEEEEEEEeCHHHcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHCCCEEEEEEecC
Confidence 2334443 47787 69999999999999999999875 999999988 479999999999999876543
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.29 E-value=8.8e-12 Score=128.88 Aligned_cols=120 Identities=18% Similarity=0.252 Sum_probs=95.3
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeec---CC---CeE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA------LDSFYVVEREGQIIACAALFPFF---KE---KCG 405 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~------l~~~~v~~~dg~IVG~~~l~~~~---~~---~~~ 405 (500)
|.++||+++++|++.+.+++...+.. +++.+..... -..++++++++++||++.+.+.. .. ..+
T Consensus 2 m~~~iR~~~~~D~~~i~~L~~~~f~~----~~~~~~~~~~~~~~~~~~~~~v~~~~g~lvG~~~~~~~~~~~~~~~~~~~ 77 (388)
T 3n7z_A 2 NAMNVIRLKEDKFREALRLSEYAFQY----KVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMG 77 (388)
T ss_dssp --CCEEECCGGGHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHCEEEEEEETTEEEEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHhCCC----CCChHHHHHHHHhhcCcccEEEEEECCEEEEEEEEEeEEEEECCEEEEee
Confidence 44679999999999999998766442 3343333322 15688899999999999976532 11 346
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
+|..++|+|+|||||+|++||++++++++++|+..+.+.. .+.+||+|+||+..+.
T Consensus 78 ~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~l~~-~a~~~Y~~~Gf~~~~~ 133 (388)
T 3n7z_A 78 GVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLHP-FAVSFYRKYGWELCAN 133 (388)
T ss_dssp EEEEEEECGGGGGGCHHHHHHHHHHHHHHHHTCCEEEECC-SCHHHHHTTTCEEEEE
T ss_pred EEEEEEECHHHCCCChHHHHHHHHHHHHHHCCCcEEEEcc-CChhhhhhcCcEEecc
Confidence 8999999999999999999999999999999998888765 6899999999998864
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.29 E-value=8e-12 Score=122.88 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=94.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcC-----c----Cc----cCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A----LV----RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 402 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~-----~----~~----~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~ 402 (500)
|.++||+++++|++.+.+++.+.+... + .. ....+.+...+ ..++++..++++||++.+.... .
T Consensus 4 m~i~IR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~va~~~g~iVG~~~~~~~~-~ 82 (266)
T 3c26_A 4 ADIVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVSGRPVATIHMEKLP-D 82 (266)
T ss_dssp --CEEEECCGGGHHHHTTCBSCCSCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECT-T
T ss_pred ceEEEEECCHHHHHHHHHHHHHHhhcccccccccccccchhhhHHHHHHHHHhccCCcEEEEEECCEEEEEEEEEEcC-C
Confidence 446799999999999999864332211 0 00 11112233222 4678888999999999998543 5
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|+.|++++++++++.|++.+ +.+ ..+.+||+|+||+..+..
T Consensus 83 ~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~GF~~~~~~ 146 (266)
T 3c26_A 83 GSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKTERLR-SAVYSWNEPSLRLVHRLGFHQVEEY 146 (266)
T ss_dssp SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHCCCEEeeEE
Confidence 679999999999999999999999999999998999999 776 478999999999988754
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=7.1e-11 Score=118.19 Aligned_cols=124 Identities=16% Similarity=0.141 Sum_probs=96.8
Q ss_pred cccccCCcccHHHH---HHHHHHHHHcCcC-ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 010815 340 EGTRTAKVTDLSGI---KQIIQPLVESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 407 (500)
Q Consensus 340 ~~iR~a~~~D~~~I---~~L~~~~~~~~~~-~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~~~~~~~I 407 (500)
+.||+++++|.+.+ .+++........+ .+.+.+.+..++ ..++++..++++||++.+........++|
T Consensus 8 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i 87 (339)
T 2wpx_A 8 LEFVPLAANDDETVGQWLDLMALAAETGPRAAPPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARV 87 (339)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHSSSSCCCCCHHHHHHHHHCCCTTEEEEEEEEEETTEEEEEEEEEEETTCSEEEE
T ss_pred eEEEECCccCHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhccCCCcceeEEEEEECCEEEEEEEEEecCCCCeEEE
Confidence 56999999995554 5544444433222 112555555544 24677888999999999986544568899
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----H-------HHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T-------RTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~-------~a~~fYek~GF~~~~~~ 463 (500)
..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ . .+.+||+|+||+..+..
T Consensus 88 ~~~~v~p~~r~~Gig~~Ll~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~~~~Gf~~~~~~ 154 (339)
T 2wpx_A 88 DQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATVVESLPSGPAQDPGPAAFAAAMGAHRSDIP 154 (339)
T ss_dssp EEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHHHHTTCEECSSC
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHHHHHCCCeeeeee
Confidence 88999999999999999999999999999999999988 3 69999999999987643
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=127.89 Aligned_cols=118 Identities=19% Similarity=0.351 Sum_probs=95.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHH---hhcCcEEEEEECCeEEEEEEEeeec------CCCeEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAI 410 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~---~~l~~~~v~~~dg~IVG~~~l~~~~------~~~~~~I~~l 410 (500)
++||+++++|++.+.+++...+... .+.+.+. .....++++.+++++||++.+.+.. .....++..+
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v 85 (396)
T 2ozg_A 10 FKYTKASQENIQQLGNILEQCFVMS----FGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 85 (396)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCC----TTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCC----CChHHHHhhhcccCcEEEEEECCEEEEEEEEEeccceECCeecceeEEEEE
Confidence 5799999999999999987664433 2233332 2223378888999999999998642 1246789999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
+|+|+|||+|+|+.|++++++++++.|+..+.+. ..+.+||+|+||+..+.
T Consensus 86 ~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~i~ln-~~a~~~Y~~~GF~~~~~ 136 (396)
T 2ozg_A 86 GIAPEYRGDGAAIALIQHTLQEISEQDIPISVLY-PATQRLYRKAGYEQAGS 136 (396)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEC-CSCHHHHHHTTCEEEEE
T ss_pred EEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEc-cccHHHHHhcCCeEccc
Confidence 9999999999999999999999999999999984 47899999999998864
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=5.4e-11 Score=107.23 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=75.1
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHh
Q 010815 379 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKS 454 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek 454 (500)
..++++..++++||++.+... ....++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|
T Consensus 39 ~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k 117 (163)
T 1yvk_A 39 GECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQK 117 (163)
T ss_dssp SEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred CeEEEEEECCEEEEEEEEEec-CCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEcCCCCHHHHHHHHH
Confidence 457888889999999999853 457899999999999999999999999999999999999999988 358999999
Q ss_pred CCCeEecee
Q 010815 455 RGFRECSIE 463 (500)
Q Consensus 455 ~GF~~~~~~ 463 (500)
+||+..+..
T Consensus 118 ~GF~~~~~~ 126 (163)
T 1yvk_A 118 CGFRIQAID 126 (163)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEecee
Confidence 999998754
|
| >3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.3e-11 Score=114.70 Aligned_cols=127 Identities=14% Similarity=0.020 Sum_probs=98.0
Q ss_pred ccccccccCCc-ccHHHHHHHHH---HHHHcCc-C--ccCCHHHHHhhc--------CcEEEEE--ECCeEEEEEEEeee
Q 010815 337 DLYEGTRTAKV-TDLSGIKQIIQ---PLVESGA-L--VRRTDEELLKAL--------DSFYVVE--REGQIIACAALFPF 399 (500)
Q Consensus 337 d~~~~iR~a~~-~D~~~I~~L~~---~~~~~~~-~--~~~s~~~~~~~l--------~~~~v~~--~dg~IVG~~~l~~~ 399 (500)
...+.||+++. +|++.+.+++. ......+ . ...+.+....++ ..+|++. .++++||++.+...
T Consensus 41 ~~~l~LR~~~~e~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~~g~~IG~~~l~~~ 120 (246)
T 3tcv_A 41 GRYVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRI 120 (246)
T ss_dssp CSSEEEEECCHHHHHHHHHHHHTSTTHHHHHTTSSSCCCSSHHHHHHHHHHHHHCSSSEEEEEEETTTCSEEEEEEEEEE
T ss_pred CCcEEEEECCchhhHHHHHHHhcCCCCHHHHhccCCCCCCCHHHHHHHHHHHhcCCCceEEEEEECCCCCEEEEEEEeec
Confidence 44568999999 79999999986 3222222 1 233555554443 2345554 37999999999754
Q ss_pred -cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 -FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 -~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.....++|+.++|+|+|||+|+|+.++..++++|.+ .|+.+|.+.+ .+|++||+|+||+..+..
T Consensus 121 ~~~~~~~eig~~~v~p~~rgkGig~~ll~~ll~~a~~~~g~~~i~l~v~~~N~~s~~lyek~GF~~~G~~ 190 (246)
T 3tcv_A 121 DPANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVFDVLGYRRYEWECHNENGPSRRAAERFGFRFEGIF 190 (246)
T ss_dssp ETTTTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred ccccCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCcEEEEEEccCCCHHHHHHHHHCCCEEEEEE
Confidence 345788998888999999999999999999999987 5999999988 579999999999998754
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.7e-11 Score=120.30 Aligned_cols=124 Identities=14% Similarity=0.021 Sum_probs=99.8
Q ss_pred cccccCCccc-HHHHHHHHHHHHHcCcC-ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCCCeEEEEEE
Q 010815 340 EGTRTAKVTD-LSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 410 (500)
Q Consensus 340 ~~iR~a~~~D-~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l 410 (500)
+.||+++.+| ++.+.+++...+...+. .+.+.+.+...+ ..++++..++++||++.+........++|..+
T Consensus 173 ~~ir~~~~~dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i~~~ 252 (330)
T 3tt2_A 173 ITARTFVPGLDERATYEAVEEAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGSV 252 (330)
T ss_dssp EEEEECCTTTSHHHHHHHHHHHTC----CCCCCHHHHHHHHTTGGGCGGGEEEEEETTTTEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEecCcccchHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhCCCCCccEEEEEEECCEEEEEEEEecCCCCCcEEEEEe
Confidence 5799999999 99999998877655432 234555554322 35788888999999999986444578999999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----HHHHHHHHhCCCeEecee
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-----~~a~~fYek~GF~~~~~~ 463 (500)
+|+|+|||+|+|+.|+.++++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 253 ~v~p~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~~~~ 310 (330)
T 3tt2_A 253 GVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHRY 310 (330)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEEEEE
T ss_pred eECHHHhhcCHHHHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEeEEE
Confidence 99999999999999999999999999999998866 358999999999998654
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=125.89 Aligned_cols=122 Identities=15% Similarity=0.237 Sum_probs=94.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC-----ccCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeecC------C
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK------E 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~-----~~~s~~~~~~~------l~~~~v~~~dg~IVG~~~l~~~~~------~ 402 (500)
++||+++.+|++.+.+++...+..... ..|+.+..... ...++++.+++++||++.+.+... .
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~va~~~g~lVG~~~~~~~~~~~~g~~~ 89 (406)
T 2i00_A 10 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 89 (406)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred ceEEECCHHHHHHHHHHHHHHcCCCCcccccccccccHHHHHHhhhccccccEEEEEECCEEEEEEEEEEEEEEECCEEE
Confidence 469999999999999998765433211 12222222211 146788889999999999875421 1
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
..++|..++|+|+|||||+|++||++++++++++|+..+.+.+ .+.+||+|+||+..+.
T Consensus 90 ~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF~~~~~ 148 (406)
T 2i00_A 90 KMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFP-YNIPYYRRKGWEIMSD 148 (406)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred EeccEEEEEEChhhCCCCHHHHHHHHHHHHHHhCCCeEEEEEc-cChhhhhccCceEccc
Confidence 3578999999999999999999999999999999998888776 4699999999998764
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.8e-11 Score=125.27 Aligned_cols=121 Identities=12% Similarity=0.178 Sum_probs=94.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh--cCcEEEEEECCeEEEEEEEeeecC------CCeEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPFFK------EKCGEVAAIG 411 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~--l~~~~v~~~dg~IVG~~~l~~~~~------~~~~~I~~l~ 411 (500)
++||+++++|++.+.+++...+....... ..+.+... ...++++++++++||++.+.+... ...++|..++
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~~-~~~~~~~~~~~~~~~va~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~ 85 (400)
T 2hv2_A 7 KRVKKMGKEEMKEMFDLVIYAFNQEPTAE-RQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 85 (400)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCCHH-HHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHcCCCCcHH-HHHHHHhhcccCcEEEEEECCEEEEEEEEeeeEEEECCEEEEeccEeEEE
Confidence 57999999999999999876654322111 01122221 246788889999999999875421 1357899999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
|+|+|||||+|++||++++++++++|+..+.+.+ .+.+||+|+||+....
T Consensus 86 V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~L~~-~~~~~Y~~~GF~~~~~ 135 (400)
T 2hv2_A 86 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 135 (400)
T ss_dssp ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred EChhhcCCCHHHHHHHHHHHHHHHcCceEEEEec-CCHhHHHhcCCEEece
Confidence 9999999999999999999999999998887766 4599999999998763
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-11 Score=116.98 Aligned_cols=124 Identities=19% Similarity=0.166 Sum_probs=97.7
Q ss_pred cccccCCcc-cHHHHHHHHHHHHHcCc-CccCCHHHHHhhc-------CcEEEEE------ECCeEEEEEEEeeecC-CC
Q 010815 340 EGTRTAKVT-DLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVE------REGQIIACAALFPFFK-EK 403 (500)
Q Consensus 340 ~~iR~a~~~-D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l-------~~~~v~~------~dg~IVG~~~l~~~~~-~~ 403 (500)
+.||+++.+ |.+.+.+++...+.... ...++.+.+...+ ..++++. .++++||++.+..... ..
T Consensus 155 ~~ir~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~g~~vG~~~~~~~~~~~~ 234 (318)
T 1p0h_A 155 VVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPG 234 (318)
T ss_dssp EEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTSTT
T ss_pred eEEEecCcccchHHHHHHHHHHhccCCCCCCcCHHHHHHHhhCcccCcCceEEEEeccccCCCCcEEEEEEeeccCCCCc
Confidence 579999999 99999999887655322 2345666655533 2467777 7899999998875432 34
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC----------CEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL----------DMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~----------~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|..++|+|+|||+|+|+.|+..+++++++.|+ +.+.+.+ ..+.+||+|+||+..+..
T Consensus 235 ~~~i~~~~V~p~~rg~Glg~~ll~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~~y~~~GF~~~~~~ 308 (318)
T 1p0h_A 235 LGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 308 (318)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEEEECHHhccCCHHHHHHHHHHHHHHHcccccccccccccceEEEEecCCCHHHHHHHHhcCCEEEeEE
Confidence 78999999999999999999999999999999999 8888877 478999999999997654
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-11 Score=128.49 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=94.8
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHH---HHhhc--CcEEEEEEC----CeEEEEEEEeeecC---C---
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE---LLKAL--DSFYVVERE----GQIIACAALFPFFK---E--- 402 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~---~~~~l--~~~~v~~~d----g~IVG~~~l~~~~~---~--- 402 (500)
|.++||+++++|++.+.+|+...+.. +++.+. +...+ ..+++++++ +++||++.+.+... .
T Consensus 27 m~~~IR~~~~~D~~~i~~L~~~~F~~----~~~~~~~~~~~~~~~~~~~~va~~~~~~~g~lVG~~~~~~~~~~~~gg~~ 102 (428)
T 3r1k_A 27 MTVTLCSPTEDDWPGMFLLAAASFTD----FIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVV 102 (428)
T ss_dssp --CEEECCCGGGHHHHHHHHHHHCTT----CCCHHHHHHHGGGSCTTCEEEEECC----CCEEEEEEEEEEEEEETTTEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhcCCCcEEEEEecCCCCCcEEEEEEEEeeeeccCCCcc
Confidence 45689999999999999998765533 333333 22222 457788776 99999999875421 1
Q ss_pred -CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEecee
Q 010815 403 -KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 -~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|+|++||++++++++++|+..+.+.+ .+.+||+|+||+..+..
T Consensus 103 ~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~a~~~g~~~~~L~~-~a~~fY~r~GF~~~~~~ 163 (428)
T 3r1k_A 103 LPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHA-SEGGIYGRFGYGPATTL 163 (428)
T ss_dssp EEEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEC-SSTTSSGGGTCEECCEE
T ss_pred cceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec-CCHHHHHhCCCEEeeeE
Confidence 3578999999999999999999999999999999998888875 57899999999988643
|
| >4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.5e-11 Score=115.75 Aligned_cols=129 Identities=14% Similarity=0.114 Sum_probs=92.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcC---------ccCCHHHHHhh----c--CcEEEEEE--CCeEEEEEEEeeecC
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGAL---------VRRTDEELLKA----L--DSFYVVER--EGQIIACAALFPFFK 401 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~---------~~~s~~~~~~~----l--~~~~v~~~--dg~IVG~~~l~~~~~ 401 (500)
.++||+++++|++.+.+++.+.+....+ .+.+.+.+... + ...+++.+ +|+|||++...+...
T Consensus 30 ~~~IR~~~~~D~~~i~~~l~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~IVG~a~~~~~~~ 109 (238)
T 4fd7_A 30 WYRVQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFREGSDEIVGVNILDVASR 109 (238)
T ss_dssp EEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTGGGCHHHHHHHHHHHHHHGGGSCCEEEEETTCCSEEEEEEEEEEET
T ss_pred eEEEEECCHHHHHHHHHHHHhhccCcChhhHHhCCCCChhhHHHHHHHHHHHHhCCcEEEEEECCCCcEEEEEEecccCc
Confidence 4689999999999999998764321111 11111222221 1 23455543 579999988765422
Q ss_pred -----------------------------------CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-
Q 010815 402 -----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 445 (500)
Q Consensus 402 -----------------------------------~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~- 445 (500)
+...++..++|+|+|||+|+|+.|++++++++++.|++.+.+.+
T Consensus 110 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~~~~ 189 (238)
T 4fd7_A 110 SDKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARIPLCRAVGLKLSATCFT 189 (238)
T ss_dssp TCCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHHHTCCEEEEEEC
T ss_pred ccccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 12456678999999999999999999999999999998766544
Q ss_pred -HHHHHHHHhCCCeEeceeccch
Q 010815 446 -TRTADWFKSRGFRECSIEMIPE 467 (500)
Q Consensus 446 -~~a~~fYek~GF~~~~~~~lp~ 467 (500)
..+++||+|+||+..+......
T Consensus 190 n~~a~~~y~k~GF~~~~~~~~~~ 212 (238)
T 4fd7_A 190 GPNSQTAATRVGFQEDFTITYGE 212 (238)
T ss_dssp SHHHHHHHHHHTCEEEEEEEHHH
T ss_pred CHHHHHHHHHCCCEEEEEEEehh
Confidence 5799999999999987655444
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-11 Score=119.76 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=89.3
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccC---CHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 410 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~---s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l 410 (500)
..++||+++.+|++.+.+++...... +..++ ..+.+...+ ..++++..++++||++.+... ...++|..+
T Consensus 117 ~~i~Ir~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~~vG~~~~~~~--~~~~~i~~l 193 (254)
T 3frm_A 117 RDVDIQLVSSNNINDYLHVYDAFARP-FGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIMT--DKTIEIDGF 193 (254)
T ss_dssp CSCEEEECCTTTHHHHHHHHTTSCCT-TCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEEC--SSCEEEEEE
T ss_pred CceEEEECCccCHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc--CCEEEEEEE
Confidence 44679999999999999986432111 11111 112222222 357888899999999999843 467899999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEecee
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~ 463 (500)
+|+|+|||||+|+.|+++++++|+..++..+......+++||+|+||+..+..
T Consensus 194 ~V~p~~Rg~GiG~~Ll~~~~~~a~~~~i~lv~~~n~~a~~~Y~k~GF~~~g~~ 246 (254)
T 3frm_A 194 GVLEEFQHQGIGSEIQAYVGRMANERPVILVADGKDTAKDMYLRQGYVYQGFK 246 (254)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHTTCCEEEEECSSCTTHHHHHHTTCEEEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHhccCcEEEEECCchHHHHHHHHCCCEEeeeE
Confidence 99999999999999999999999554433321112578999999999998765
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=3.1e-11 Score=121.70 Aligned_cols=122 Identities=13% Similarity=0.003 Sum_probs=90.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHH----cC-cCc-cCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeecC-CCeE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVE----SG-ALV-RRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK-EKCG 405 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~----~~-~~~-~~s~~~~~~~------l~~~~v~~~dg~IVG~~~l~~~~~-~~~~ 405 (500)
.+.||+++++|.+.+.+++..... .. +.. ..+.+..... -...+++.+++++||++.+..... ...+
T Consensus 155 ~l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~ 234 (333)
T 4ava_A 155 QLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVA 234 (333)
T ss_dssp EEEEEECCTTCGGGTCCCSSCCCHHHHHGGGCC-----HHHHHHHHHHCCSSEEEEEEEETTEEEEEEEEEECSSCTTEE
T ss_pred EEEecCCChhHHHHHHHHHHhCChhhHHHHHcCCCCCCHHHHHHHhccCccccEEEEEEeCCCeEEEEEEEecCCCCCeE
Confidence 357999999999988777543211 11 111 1122222211 124678888999999999986544 3566
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEec
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 461 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~ 461 (500)
++ .++|+|+|||+|+|+.|++++++++++.|++++.+.+ ..+++||+|+||+...
T Consensus 235 e~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 293 (333)
T 4ava_A 235 EI-AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQR 293 (333)
T ss_dssp EE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEE
T ss_pred EE-EEEECHHhcCCCHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceec
Confidence 66 7999999999999999999999999999999999988 5799999999999763
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-10 Score=114.76 Aligned_cols=121 Identities=20% Similarity=0.196 Sum_probs=94.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhcC-------cEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------SFYVVEREGQIIACAALFPFFKEKCGEVAAIG 411 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l~-------~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~ 411 (500)
+.||+++.+|++.+.+|+...+..... ...+.+.+...+. .+++++.+|++||++.+... .....+..++
T Consensus 13 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~--~~~~~~~~~~ 90 (330)
T 3tt2_A 13 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAAAYADVLNR--RYVQLSVYGY 90 (330)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTTSCHHHHEEEEECTTSSEEEEEEEEEE--TTTEEEEEEE
T ss_pred eeeCCCChHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHhhccCcccceEEEECCCCcEEEEEEEEec--CCeEEEEEEE
Confidence 579999999999999999887665443 3446666655542 46777778999999999643 2344555799
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHC-------CCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASL-------GLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~-------g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
|+|+|||+|||+.|++++++++++. +...+.+.+ ..+.+||+++||+....
T Consensus 91 V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~~~Gf~~~~~ 152 (330)
T 3tt2_A 91 VHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVRD 152 (330)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ECccccCccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHHHhCCCceEEE
Confidence 9999999999999999999999886 444554444 56899999999998754
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=127.24 Aligned_cols=119 Identities=14% Similarity=0.201 Sum_probs=95.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHH---HHHhhc--CcEEEEEEC--CeEEEEEEEeeec----CC---CeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE---ELLKAL--DSFYVVERE--GQIIACAALFPFF----KE---KCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~---~~~~~l--~~~~v~~~d--g~IVG~~~l~~~~----~~---~~~ 405 (500)
++||+++++|++.+.+++...+.. +.+.+ .+...+ ..+++++++ +++||++.+.+.. .. ..+
T Consensus 25 m~IR~~~~~D~~~i~~L~~~~F~~----~~~~~~~~~~~~~~~~~~~~va~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~ 100 (422)
T 3sxn_A 25 RTLHTITDDDWTRIALLARFAFGD----IEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVA 100 (422)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHSC----CCCHHHHHHHHTTCCTTCEEEEECTTSSSEEEEEEEEEEEEECTTSCEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhcCCCcEEEEEECCCCcEEEEEEEEEeEeecCCCcccccc
Confidence 379999999999999998877643 22322 233222 467888888 9999999987643 11 347
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~~ 463 (500)
+|..++|+|+|||||+|++||+++++.++++|+..+.+.+ .+.+||+|+||+..+..
T Consensus 101 ~I~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF~~~~~~ 157 (422)
T 3sxn_A 101 GISFVAVAPTHRRRGVLRAMYTELHDRIARAGYPLAVLTA-SEGGIYGRFGYGVATIE 157 (422)
T ss_dssp EEEEEEECTTTTTSSHHHHHHHHHHHHHHHHTCSEEEECC-SSTTSSGGGTCEECCEE
T ss_pred eEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCHHHHHhCCCEEecee
Confidence 8999999999999999999999999999999998877765 56899999999998753
|
| >2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=104.52 Aligned_cols=109 Identities=14% Similarity=0.313 Sum_probs=83.5
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecC---------CCeEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK---------EKCGEVA 408 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~---------~~~~~I~ 408 (500)
.+..||+++.+|++.+.+++...+... ....+++...+++++|++.+..... ...++|.
T Consensus 19 ~~~~iR~~~~~D~~~i~~l~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~ 86 (163)
T 2pr1_A 19 EFKKFKEYGIQELSMLEELQDNIIEND------------STSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELW 86 (163)
T ss_dssp HHTTSSSCCHHHHHHHHHHHHCGGGTT------------EEEEEEEEEETTEEEEEEEEEEECTTSSCCSGGGCCEEEEE
T ss_pred ceeeeEEcChhhHHHHHHHHHHhhccc------------cCCceEEEEeCCceeEEEEEEecCCeeeeEEecCCCEEEEE
Confidence 345799999999999999976433211 1234566778899999988875432 3468899
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++++++. ++ .+.+.+ +.+++||+|+||+..+..
T Consensus 87 ~l~V~p~~rg~GiG~~Ll~~~~~~----g~-~l~~~~~n~a~~fY~k~GF~~~~~~ 137 (163)
T 2pr1_A 87 KLEVLPGYQNRGYGRALVEFAKSF----KM-PIRTNPRMKSAEFWNKMNFKTVKYD 137 (163)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHTT----CS-CEEECCCGGGHHHHHHTTCEECCCC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHc----Cc-EEEEecCchHHHHHHHcCCEEeeeE
Confidence 999999999999999999999983 44 344444 568999999999998764
|
| >2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.1e-11 Score=111.82 Aligned_cols=104 Identities=17% Similarity=0.084 Sum_probs=76.9
Q ss_pred CcEEEEEECCeEEEEEEEeeecC---------CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCC----------
Q 010815 379 DSFYVVEREGQIIACAALFPFFK---------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD---------- 439 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~~~---------~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~---------- 439 (500)
..+++++.++++||++.+..... ...++|..++|+|+|||+|||+.|+++++++++..++.
T Consensus 61 ~~~~vA~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~~~a~~~~~i~l~~~~~~~~ 140 (211)
T 2q04_A 61 GRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHW 140 (211)
T ss_dssp CEEEEEEETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHTSGGGGGSEEEEEECGGGC
T ss_pred cEEEEEEECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceeeeehhhhc
Confidence 45788889999999999864321 14678888999999999999999999999998776542
Q ss_pred ---EEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecCCC
Q 010815 440 ---MLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489 (500)
Q Consensus 440 ---~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll~~ 489 (500)
.+.+.+ ..|++||+|+||+..+....... .....++|.++-+.
T Consensus 141 ~~~~~~L~V~~~N~~A~~lY~k~GF~~~g~~~~~~~-------~~~d~~~M~r~g~~ 190 (211)
T 2q04_A 141 DLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIA-------SHPANCLMARIGKH 190 (211)
T ss_dssp CHHHHCCCHHHHHHHHHHHHHHTTCEEECCCCHHHH-------TSTTCEEEEEECTT
T ss_pred CccccccchhhhhHHHHHHHHHCCCEEeccCCcccc-------ccHHHHhhhhhcCC
Confidence 222333 46899999999999987532111 12346888776543
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-10 Score=112.77 Aligned_cols=83 Identities=11% Similarity=-0.033 Sum_probs=72.3
Q ss_pred EEEEEE--CCeEEEEEEEeeec-CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH--CCCCEEEEEc----HHHHHH
Q 010815 381 FYVVER--EGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADW 451 (500)
Q Consensus 381 ~~v~~~--dg~IVG~~~l~~~~-~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~--~g~~~I~l~~----~~a~~f 451 (500)
++++.+ +++++|++.+.... ....+++..++|+|+|||+|+|+.|+.++++++++ .|++.+.+.+ ..+++|
T Consensus 237 ~~~~~~~~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~~~~~~~~~g~~~~~l~v~~~N~~a~~l 316 (339)
T 2wpx_A 237 HTGAVHDATGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPEVRLVETANAEDNHPMIAV 316 (339)
T ss_dssp EEEEEETTTTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHH
T ss_pred EEEEEeCCCCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHHHHHHHhCCCceEEEEecccccHHHHHH
Confidence 555666 89999999987542 34578999999999999999999999999999999 8999999887 478999
Q ss_pred HHhCCCeEecee
Q 010815 452 FKSRGFRECSIE 463 (500)
Q Consensus 452 Yek~GF~~~~~~ 463 (500)
|+|+||+..+..
T Consensus 317 y~~~Gf~~~~~~ 328 (339)
T 2wpx_A 317 NAALGFEPYDRW 328 (339)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCEEeccE
Confidence 999999998755
|
| >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=95.58 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=68.2
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCC-Ce
Q 010815 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRG-FR 458 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~G-F~ 458 (500)
.+++...+++++|++.+... .+...+|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ .+..||+|+| |.
T Consensus 12 ~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~-~~~nfy~k~~~~~ 89 (102)
T 1r57_A 12 KFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASCS-FAKHMLEKEDSYQ 89 (102)
T ss_dssp EEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESSH-HHHHHHHHCGGGT
T ss_pred EEEEEECCCeEEEEEEEEeC-CCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHcCCCEEEcCH-HHHHHHHhChHHH
Confidence 35555578999999999854 336789999999999999999999999999999999998877664 6899999998 88
Q ss_pred Eece
Q 010815 459 ECSI 462 (500)
Q Consensus 459 ~~~~ 462 (500)
....
T Consensus 90 ~~~~ 93 (102)
T 1r57_A 90 DVYL 93 (102)
T ss_dssp TTBC
T ss_pred HHhh
Confidence 7543
|
| >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.7e-10 Score=110.55 Aligned_cols=121 Identities=11% Similarity=-0.018 Sum_probs=90.0
Q ss_pred cccccccCCcc-cHHHHHHHHHHHHHcCcC---ccCCHHHHHhh--------cCcEEEEE--ECCeEEEEEEEeeecCCC
Q 010815 338 LYEGTRTAKVT-DLSGIKQIIQPLVESGAL---VRRTDEELLKA--------LDSFYVVE--REGQIIACAALFPFFKEK 403 (500)
Q Consensus 338 ~~~~iR~a~~~-D~~~I~~L~~~~~~~~~~---~~~s~~~~~~~--------l~~~~v~~--~dg~IVG~~~l~~~~~~~ 403 (500)
..+.||+++.+ |++.+.+++.+.....+. .....+.+... -...+++. .++++ |++.+.....
T Consensus 15 ~~l~lR~~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~-G~~~~~~~~~-- 91 (301)
T 2zw5_A 15 ARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVP-GMAGLLGGTD-- 91 (301)
T ss_dssp SSCEEEECCHHHHHHHHHHHHTCHHHHTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEECCBTTTBCC-EEEEEESSCS--
T ss_pred CCEEEEeCchhcCHHHHHHHhcCchhhhhcCCChHHHHHHHHHHHHHhhccCCceEEEEEECCCCCe-EEEEEecCCC--
Confidence 34679999999 999999998754332221 22222222221 11234443 36899 9999985443
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
.++++ ++|+|+|||+|+|+.|++.+++++.+ .|+++|.+.+ ..+++||+|+||+..+.
T Consensus 92 ~~~ig-~~v~~~~~g~G~g~~l~~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~ 154 (301)
T 2zw5_A 92 VPGLT-WLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERAR 154 (301)
T ss_dssp SCEEE-EEECTTSTTTTHHHHHHHHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHTTCEEEEE
T ss_pred eEEEE-EEECHhHcCCCHHHHHHHHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHcCCcCcce
Confidence 67784 88999999999999999999999964 5999999988 57999999999999875
|
| >3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis} | Back alignment and structure |
|---|
Probab=99.06 E-value=7.5e-10 Score=107.75 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=86.4
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCcc-CCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCc
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVR-RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~-~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yR 417 (500)
..+||+++++|++.+.+.. +.+.+... .+.+.+... ...+++..++++||++.+... .....++ .++|+|+||
T Consensus 123 ~~~ir~~d~~d~~~~~~~~---w~~~~~~~~~~~~~~~~~-g~~~v~~~~g~iVG~~~~~~~-~~~~~ei-~i~v~p~~r 196 (249)
T 3g3s_A 123 SFDMKLIDRNLYETCLVEE---WSRDLVGNYIDVEQFLDL-GLGCVILHKGQVVSGASSYAS-YSAGIEI-EVDTREDYR 196 (249)
T ss_dssp TSEEEECCHHHHHHHHHST---TTGGGTTTSSSHHHHHHH-CCEEEEEETTEEEEEEEEEEE-ETTEEEE-EEEECGGGT
T ss_pred CcEEEECCHHHHHHHHhcc---CHHHHHHhccCHHHHHhC-CcEEEEEECCEEEEEEEEEEe-cCCeEEE-EEEEChHhc
Confidence 3579999999998876321 22222211 233444333 455677789999999988754 3455666 799999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
|||+|+.|+++++++++++|+....... ..+++||+|+||+..+..
T Consensus 197 GkGlg~~Ll~~li~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~~ 243 (249)
T 3g3s_A 197 GLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKAY 243 (249)
T ss_dssp TSSHHHHHHHHHHHHHHHTTCEEECEESSHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 9999999999999999999886433222 679999999999998754
|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.00 E-value=7.9e-10 Score=116.06 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=71.1
Q ss_pred EeeeCHHHHHHHHhCCCcEEEcC-cccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccc
Q 010815 127 VKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHLI 195 (500)
Q Consensus 127 v~~vd~~~I~~lL~~g~IPVi~~-~~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I 195 (500)
+..++.+.|..+|+.|.|||+++ .+.+++|.+.+++ +|.+|+.+|.+|+||.++++|||||++ |++++|
T Consensus 148 ~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i 227 (446)
T 3tvi_A 148 DEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTI 227 (446)
T ss_dssp CHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBC
T ss_pred ehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEc
Confidence 44567899999999999999998 4667788888774 999999999999999999999999983 368999
Q ss_pred cccCHHHHHHHH
Q 010815 196 RFLTLQEADSLI 207 (500)
Q Consensus 196 ~~i~~~e~~~~~ 207 (500)
++++.+|+.++.
T Consensus 228 ~~is~~e~~ela 239 (446)
T 3tvi_A 228 SKISYKELRELS 239 (446)
T ss_dssp SEEEHHHHHHTT
T ss_pred ceeCHHHHHHHH
Confidence 999999988874
|
| >2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-09 Score=101.24 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=90.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcC-cC-ccCCHH----HHHhhc---------CcEEEEE-ECCeEEEEEEEeeecCCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESG-AL-VRRTDE----ELLKAL---------DSFYVVE-REGQIIACAALFPFFKEK 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~-~~-~~~s~~----~~~~~l---------~~~~v~~-~dg~IVG~~~l~~~~~~~ 403 (500)
..||+++++|++.+.+++...+... +. ...+.+ .+..++ ..++++. .++++||++.+.... ..
T Consensus 94 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~l~~~~-~~ 172 (235)
T 2ft0_A 94 SGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELN-AT 172 (235)
T ss_dssp CCCEECCGGGHHHHHHHHHHHTTTSTTCTTTSCTTHHHHHHHHHHHHHHTCCTTEEEEEEECTTSCEEEEEEEEECS-SS
T ss_pred ceEEeCCHHhHHHHHHHHHhhHhhccCCCCCCCHHHHHHHHHHHHHHhhccCCCceEEEEECCCCcEEEEEEEEecC-CC
Confidence 4699999999999999998876654 21 111111 222222 3467777 789999999998532 22
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
...++|.| |+|+|+.|+.++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 173 ---~~~i~v~~---g~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~GF~~~~~~ 230 (235)
T 2ft0_A 173 ---DARIGLLA---GRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTA 230 (235)
T ss_dssp ---EEEEEEEE---CTTCHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ---ceEEEEEc---CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEeEEE
Confidence 25788888 9999999999999999999999999988 479999999999997654
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-09 Score=107.61 Aligned_cols=112 Identities=15% Similarity=0.159 Sum_probs=84.6
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~-~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
..||+++.+|++.+.+++.. ....+.+.+...+ ..+.+.. .++++||++.... .+++..++|+|+
T Consensus 174 l~lR~l~~~D~~~i~~~~~~------~~~~~~~~i~~~i~~~~~~~i~~~~~g~~VG~~~~~~-----~~~i~~l~V~p~ 242 (312)
T 1sqh_A 174 FEIRRLRAEDAAMVHDSWPN------KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQND-----FSGLGMLQVLPK 242 (312)
T ss_dssp EEEECCCGGGHHHHHHTCTT------CSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEECT-----TSSEEEEEECGG
T ss_pred eEEEECCHHHHHHHHHHhCc------CCcchHHHHHHHHhcCCcEEEEEecCCCEEEEEEEcC-----CceEEEEEECHH
Confidence 47999999999998887421 1122344333322 2344444 5789999987642 346888999999
Q ss_pred CcCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 416 CRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~-~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|||+|+|+.|++.++++++ +.|+. +.+.+ ..|++||+|+||+..+..
T Consensus 243 ~rgkGiG~~ll~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyeklGF~~~g~~ 294 (312)
T 1sqh_A 243 AERRGLGGLLAAAMSREIARGEEIT-LTAWIVATNWRSEALLKRIGYQKDLVN 294 (312)
T ss_dssp GCSSSHHHHHHHHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred HcCCCHHHHHHHHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 9999999999999999998 88988 77766 579999999999987653
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.8e-09 Score=104.16 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=83.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEEC---CeEEEEEEEeeecCCCeEEEEEEEEc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVERE---GQIIACAALFPFFKEKCGEVAAIGVS 413 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~d---g~IVG~~~l~~~~~~~~~~I~~l~V~ 413 (500)
.+|+++++|++.+.+|+..........+.+.+ ....+ ...+++..+ +++||++.+...... ...+..++|+
T Consensus 9 ~~R~~~~~D~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~g~~vG~~~~~~~~~~-~~~~~~l~v~ 86 (318)
T 1p0h_A 9 WRSALTADEQRSVRALVTATTAVDGVAPVGEQ-VLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGA-GGAMAELVVH 86 (318)
T ss_dssp CBSCCCHHHHHHHHHHHHHHHHHHSSCSSCHH-HHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEEC
T ss_pred eecCCCHHHHHHHHHHHHHHHHhcCCCchhHH-HHHHhhcCCCcEEEEEeCCCCCcEEEEEEEECCCCC-CcEEEEEEEC
Confidence 35699999999999999876543322233333 22333 356777877 999999999854322 2234478999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
|+|||+|+|+.|++++++++. ..+.+.+ ..+.+||+++||+....
T Consensus 87 p~~rg~Gig~~Ll~~~~~~~~----~~~~~~~~~~~~~a~~~y~~~Gf~~~~~ 135 (318)
T 1p0h_A 87 PQSRRRGIGTAMARAALAKTA----GRNQFWAHGTLDPARATASALGLVGVRE 135 (318)
T ss_dssp GGGCSSSHHHHHHHHHHHHTT----TCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHHHHHHHHHHhhc----CEEEEEEcCCCHHHHHHHHHCCCeeEeE
Confidence 999999999999999998763 2344544 46899999999998764
|
| >1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3 | Back alignment and structure |
|---|
Probab=98.84 E-value=2.7e-08 Score=93.55 Aligned_cols=118 Identities=8% Similarity=0.107 Sum_probs=91.7
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCccC------CHHHHHhhcCcEEEEEECCeEEEEEEEeeec---------------
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVRR------TDEELLKALDSFYVVEREGQIIACAALFPFF--------------- 400 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~~------s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~--------------- 400 (500)
++..+.+++++++++..+.+-.+...+. ..+.++..-..+++..++++++||+.+.+..
T Consensus 11 ~~~~~~~~~~~~~~LR~~VFv~E~g~~~~~~~~~E~D~~D~~~~~~lv~~~~g~~vGt~Rll~~~~~~~l~~~f~~~~~~ 90 (201)
T 1ro5_A 11 REEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHG 90 (201)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTT
T ss_pred cccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCEEEEEEeCCeEEEEEecCCCCCCchhhhhhhhhcCC
Confidence 4566677888999998887766654221 1222333223455566779999999998632
Q ss_pred -----CCCeEEEEEEEEccCCcC----CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeE
Q 010815 401 -----KEKCGEVAAIGVSPECRG----QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 459 (500)
Q Consensus 401 -----~~~~~~I~~l~V~p~yRG----~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~ 459 (500)
.+..++++.++|+|++|+ .|+|..|+..+++++++.|++.+++.+ ..+.+||+++||..
T Consensus 91 ~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~~~a~~~g~~~~~~~a~~~~~~fy~r~G~~~ 159 (201)
T 1ro5_A 91 KEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDV 159 (201)
T ss_dssp CCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEE
T ss_pred CCCCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCe
Confidence 245689999999999998 799999999999999999999999988 67899999999985
|
| >2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.69 E-value=7.1e-08 Score=105.35 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=70.6
Q ss_pred cCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecC------------------------------------CCeEEE
Q 010815 368 RRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK------------------------------------EKCGEV 407 (500)
Q Consensus 368 ~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~------------------------------------~~~~~I 407 (500)
..+++++...+ +.++++..+++++|++.+....+ ....+|
T Consensus 379 r~sp~dL~~llD~p~~~l~va~~~g~IVG~i~v~~eG~l~~~~~~~~~~g~rRp~G~lip~~l~~~~~~~e~~~~~~~~I 458 (671)
T 2zpa_A 379 RTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLAATLRGRRV 458 (671)
T ss_dssp SBCHHHHHHHHHCTTEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHTSCCCSSCHHHHHHHHHSSCTTGGGSEEEEE
T ss_pred CCCHHHHHHHhcCCCceEEEEEECCeEEEEEEEEEcCCcCHHHHHHHHhcccCCCCcchhHHHHHhhcchhhcccCceEE
Confidence 34455555443 46888888999999998853211 234689
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE-EcHHHHHHHHhCCCeEecee
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LTTRTADWFKSRGFRECSIE 463 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l-~~~~a~~fYek~GF~~~~~~ 463 (500)
..++|+|+|||+|||++|+++++++++..++..+.. .+..+++||+|+||+.+...
T Consensus 459 ~~IAV~P~~rg~GiG~~LL~~~e~~a~~~~~l~v~~~~n~~ai~FYek~GF~~v~ig 515 (671)
T 2zpa_A 459 SRIAVHPARQREGTGRQLIAGALQYTQDLDYLSVSFGYTGELWRFWQRCGFVLVRMG 515 (671)
T ss_dssp EEEEECTTSCSSSHHHHHHHHHHHTCCSCSEEEEEEECCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHhcCCEEEEEecCCHHHHHHHHHCCCEEEeee
Confidence 999999999999999999999999874333323332 23679999999999998643
|
| >3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.7e-07 Score=86.76 Aligned_cols=119 Identities=14% Similarity=0.123 Sum_probs=84.7
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcC--cc-----CCHHHHHhhcCcEEEEEE-CCeEEEEEEEeeec-------------
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGAL--VR-----RTDEELLKALDSFYVVER-EGQIIACAALFPFF------------- 400 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~--~~-----~s~~~~~~~l~~~~v~~~-dg~IVG~~~l~~~~------------- 400 (500)
+...+.+++++++++..+.+-.+.. .+ ...+.++..-.++++..+ +++++|++.+.+..
T Consensus 8 ~~~l~~~~~~~~~~LR~~VFv~Eqg~~~~~~~~~~E~D~~D~~~~h~lv~~~~~g~~vgt~Rll~~~~~~~l~~~f~~l~ 87 (201)
T 3p2h_A 8 AGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKMERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQEVFPHLL 87 (201)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTSCCSCCCCSSCCCCCTTCCTTCEEEEEECTTSCEEEEEEEEETTSCCHHHHTCGGGC
T ss_pred cccCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccCCCCCCCEEEEEEcCCCeEEEEEEeccccCCccccccChhhc
Confidence 4566778888999998887766543 21 122223222223555554 68999999998632
Q ss_pred ------CCCeEEEEEEEEccCC-cC-C---cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEe
Q 010815 401 ------KEKCGEVAAIGVSPEC-RG-Q---GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 460 (500)
Q Consensus 401 ------~~~~~~I~~l~V~p~y-RG-~---GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~ 460 (500)
.+..+++++++|+|+| |+ + +.+..|+..++++++++|++.+++.+ ..+.+||+++||...
T Consensus 88 ~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~~~a~~~g~~~~~~~aq~~~~~~y~rlG~~~~ 159 (201)
T 3p2h_A 88 ADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSMERMFRRIGVHAH 159 (201)
T ss_dssp SSCCCCCTTEEEEEEEEEC----------CTTHHHHHHHHHHHHHHTTCSEEEEEEEHHHHHHHHHHTCEEE
T ss_pred CCccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 2467899999999999 64 3 35999999999999999999999888 678999999999953
|
| >1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.2e-07 Score=77.81 Aligned_cols=69 Identities=14% Similarity=0.057 Sum_probs=56.7
Q ss_pred EEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHH-HHHhCC-CeE
Q 010815 390 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSRG-FRE 459 (500)
Q Consensus 390 IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~-fYek~G-F~~ 459 (500)
.+|++.+....++..++|..++|+|+|||+|+|+.|+++++++|++.|++.+.+. +.+.+ ||+|+. |..
T Consensus 22 ~vG~i~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~-~~~~~~f~~k~~~~~~ 92 (103)
T 1xmt_A 22 HEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSC-SYVSDTFLPRNPSWKP 92 (103)
T ss_dssp SSSEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEECS-HHHHHTHHHHCGGGGG
T ss_pred cEEEEEEEEcCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCeEEEEe-hhhhHHHHHhChhHHh
Confidence 4688888754333589999999999999999999999999999999999876544 46677 999984 554
|
| >1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.5e-07 Score=88.75 Aligned_cols=82 Identities=11% Similarity=0.116 Sum_probs=68.7
Q ss_pred cEEEEEECCeEEEEEEEeeecC-------------------CCeEEEEEEEEccCCcCCc-------HHHHHHHHHHHHH
Q 010815 380 SFYVVEREGQIIACAALFPFFK-------------------EKCGEVAAIGVSPECRGQG-------QGDKLLDYIEKKA 433 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~-------------------~~~~~I~~l~V~p~yRG~G-------iG~~Ll~~l~~~a 433 (500)
.+++..+++++||++.+.+... .. ++++.++|+|+ |++| ++..|+..+++++
T Consensus 73 ~hll~~~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~~~a 150 (230)
T 1kzf_A 73 RYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMVNWA 150 (230)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHHHHH
Confidence 3555567999999999986321 23 79999999999 9887 9999999999999
Q ss_pred HHCCCCEEEEEc-HHHHHHHHhCCCeE--ecee
Q 010815 434 ASLGLDMLFLLT-TRTADWFKSRGFRE--CSIE 463 (500)
Q Consensus 434 ~~~g~~~I~l~~-~~a~~fYek~GF~~--~~~~ 463 (500)
++.|++.+++.+ ..+.+||+++||.. .+..
T Consensus 151 ~~~G~~~l~~~aq~~~~~fy~r~G~~~~~~G~~ 183 (230)
T 1kzf_A 151 QNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEA 183 (230)
T ss_dssp HHTTCSEEEEEEEHHHHHHHHHHCCCCEEEEEE
T ss_pred HHCCCCEEEEEeCHHHHHHHHHcCCCeEECCCC
Confidence 999999999988 67899999999974 5543
|
| >3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.34 E-value=2.3e-07 Score=84.38 Aligned_cols=119 Identities=9% Similarity=0.013 Sum_probs=79.9
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHcCcCccC---CHHHHHhh-----cCcEEEE-E-ECCeEEEEEEEeeecCCCeEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEELLKA-----LDSFYVV-E-REGQIIACAALFPFFKEKCGE 406 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~---s~~~~~~~-----l~~~~v~-~-~dg~IVG~~~l~~~~~~~~~~ 406 (500)
...+.||+++++|++.+.+++... ....... ..+..... -...|.+ . .++++||++.+. .....++
T Consensus 11 ~~rl~LR~~~~~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~--~~~~~~e 86 (176)
T 3shp_A 11 GPTVYLRAMVEDDKHHAAAWFDSR--FPVNAARAEAFLKEKLQGDPWDARWHLLAIVRRSDEAVVGSCRIE--FGKQTAS 86 (176)
T ss_dssp CSSEEEEECCHHHHHHGGGTCCCS--CCSCSSSCCCCCCGGGGCCGGGCEEEEEEEEETTTCCEEEEEEEE--ECSSEEE
T ss_pred cCeEEEeeCCHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhhcCccccCceEEEEEECCCCcEEEEEEEe--cCCCEEE
Confidence 445689999999999888865411 0110000 01111111 0123333 3 478999999993 3346778
Q ss_pred EEEE---EE-ccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAI---GV-SPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l---~V-~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|+.. .+ +|+||| +.++..+++++.+ .++++|.+.+ .+|+++|+|+||+..+..
T Consensus 87 ig~~~~~~i~~~~~~G----~ea~~~ll~~af~~~~~~~i~~~v~~~N~~s~~l~ek~GF~~~G~~ 148 (176)
T 3shp_A 87 LRFHMAPWLDDADVLR----AEALELVVPWLRDEHELLVITVEIAADEQRTLAAAEAAGLKAAVRM 148 (176)
T ss_dssp EEEEECTTCSCHHHHH----HHHHHHHHHHHHHHSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEeecceecChhHhh----HHHHHHHHHHHHhhCCeEEEEEEEcCCCHHHHHHHHHCCCEEEEEe
Confidence 8430 44 899998 7888888888864 6999999988 589999999999998854
|
| >1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=3.8e-06 Score=84.01 Aligned_cols=101 Identities=8% Similarity=0.209 Sum_probs=73.5
Q ss_pred cccccCCcccHHHHHHHHHHH------HHc-CcCccCCHHHHHhhcCcEEEEEE-CCeEEEEEEEeeecC----------
Q 010815 340 EGTRTAKVTDLSGIKQIIQPL------VES-GALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK---------- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~------~~~-~~~~~~s~~~~~~~l~~~~v~~~-dg~IVG~~~l~~~~~---------- 401 (500)
+.|+.++..| +.+.+|+... +.+ +...... . .....+++++. ++++||++.+..++.
T Consensus 134 ~eI~~a~~~D-~~~~~L~~r~q~~~l~fIE~~~~id~d--d--~~w~~~~v~e~~~~~ivG~~t~y~~~~~~~~~~f~~~ 208 (320)
T 1bob_A 134 FVVYKSSLVD-DFARRMHRRVQIFSLLFIEAANYIDET--D--PSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDED 208 (320)
T ss_dssp EEEEEECSCS-HHHHHHHHHHTHHHHHHSTTCCCCCTT--C--TTEEEEEEEETTTCCEEEEEEEEEECCC---------
T ss_pred EEEEEeccCC-HHHHHHHHHHHHHHHhcccCCcccCcc--C--CCceEEEEEEccCCcEEEEEEEEeeeccCCccccccc
Confidence 5799999999 8888888753 111 1111111 1 23345666665 789999999976432
Q ss_pred ---CCeEEEEEEEEccCCcCCcHHHHHHHHHH-HHHHHCCCCEEEEEc
Q 010815 402 ---EKCGEVAAIGVSPECRGQGQGDKLLDYIE-KKAASLGLDMLFLLT 445 (500)
Q Consensus 402 ---~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~-~~a~~~g~~~I~l~~ 445 (500)
....+|..+.|.|.|||+|+|++|++++. .+++..++..|.+.-
T Consensus 209 ~~~~~R~rIsq~lVlPpyQgkGiG~~Ll~~i~~~~~~~~~i~~ItVeD 256 (320)
T 1bob_A 209 IDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED 256 (320)
T ss_dssp CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred ccCCceEEEEEEEEcHHHhCCCHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 44678999999999999999999999999 566677888777755
|
| >1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8 | Back alignment and structure |
|---|
Probab=98.15 E-value=9e-06 Score=81.47 Aligned_cols=122 Identities=11% Similarity=0.088 Sum_probs=84.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCH-----------HHHHhhc-----C-cEEEEEE--CCeEEEEEEEeee-
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-----------EELLKAL-----D-SFYVVER--EGQIIACAALFPF- 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~-----------~~~~~~l-----~-~~~v~~~--dg~IVG~~~l~~~- 399 (500)
+.||+++.+|+++|.+|.++.-..--..+.+. +.+.... + .++|+++ +|+|+|++.+...
T Consensus 4 ~~IRpa~~~Dl~aL~~La~e~G~G~tsLP~d~e~L~~rI~~S~~sf~~~~~~~~~~~ylfVlED~~~g~VVG~~gI~a~v 83 (342)
T 1yle_A 4 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 83 (342)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred eEEecCCHHHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEECCCCEEEEEEEEEEec
Confidence 46999999999999999766521111123232 2332221 1 3567786 6999999976532
Q ss_pred ----------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH---HCCCCEEE
Q 010815 400 ----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLF 442 (500)
Q Consensus 400 ----------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~---~~g~~~I~ 442 (500)
+-....+|+.++|+|+|||+|+|+.|.+...-.+. ++-..+|+
T Consensus 84 G~~~PfY~yr~~t~v~~S~~L~v~~~~~~L~L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~lfiA~~~~rF~~~v~ 163 (342)
T 1yle_A 84 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVV 163 (342)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEE
T ss_pred CCCccceeeeecceeeeccccccccccceEEeecCCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHChhhhhhhhh
Confidence 01356789999999999999999999988776664 34567788
Q ss_pred EEc------HHHHHHHHhCCCeEec
Q 010815 443 LLT------TRTADWFKSRGFRECS 461 (500)
Q Consensus 443 l~~------~~a~~fYek~GF~~~~ 461 (500)
++- ...-+||+.+|=...+
T Consensus 164 AEmrG~~De~G~SPFW~~lg~~Ff~ 188 (342)
T 1yle_A 164 VEIVGYSDEQGESPFWNAVGRNFFD 188 (342)
T ss_dssp EECCBCCCTTCCCHHHHHTGGGTSC
T ss_pred eeccCccCCCCCCccHhHhhcccCC
Confidence 776 3457899988755544
|
| >3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00017 Score=62.76 Aligned_cols=80 Identities=11% Similarity=0.149 Sum_probs=66.3
Q ss_pred EEEEEECCeEEEEEEEeee-cCCCeEEEEEEEEccCCcCCc---HHHHHHHHHHHHHH-HCCCCEEEEEc--HHHHHHHH
Q 010815 381 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQG---QGDKLLDYIEKKAA-SLGLDMLFLLT--TRTADWFK 453 (500)
Q Consensus 381 ~~v~~~dg~IVG~~~l~~~-~~~~~~~I~~l~V~p~yRG~G---iG~~Ll~~l~~~a~-~~g~~~I~l~~--~~a~~fYe 453 (500)
+.+...++++||.+.+... +....+++ .+.+.++ |+| +|+..+..+++++. +.++.+|.+.+ .+|++.|+
T Consensus 22 fiI~~~~~~~IG~i~i~~Id~~nr~a~i-~I~Igk~--gkG~~~ygtEAl~l~l~y~F~elnlhKi~l~v~~~~ai~~ye 98 (135)
T 3dns_A 22 YLITDKYGITIGRIFIVDLNKDNRFCMF-RMKIYKQ--GKSINTYIKEILSVFMEFLFKSNDINKVNIIVDEEVSTQPFV 98 (135)
T ss_dssp EEEEETTCCEEEEEEEEEEETTTTEEEE-EEEECCC--SSCCHHHHHHHHHHHHHHHHHHSCCSEEEEEEETTSCSHHHH
T ss_pred EEEECCCCCEEEEEEEEEeccccCEEEE-EEEEeeC--CCChHHHHHHHHHHHHHHHHHhcCceEEEEEEecHHHHHHHH
Confidence 4444557899999999765 45677887 6777776 999 99999999999996 47999999988 67999999
Q ss_pred hCCCeEecee
Q 010815 454 SRGFRECSIE 463 (500)
Q Consensus 454 k~GF~~~~~~ 463 (500)
|+||+..+.-
T Consensus 99 KlGF~~EG~l 108 (135)
T 3dns_A 99 ELGFAFEGII 108 (135)
T ss_dssp HTTCEEEEEE
T ss_pred HcCCeEeeee
Confidence 9999998854
|
| >2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.027 Score=56.06 Aligned_cols=57 Identities=12% Similarity=0.289 Sum_probs=47.0
Q ss_pred eEEEEEEEeeec---CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc
Q 010815 389 QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT 445 (500)
Q Consensus 389 ~IVG~~~l~~~~---~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~ 445 (500)
.++|+++.+.++ +.....|..+.|.|.|||+|+|+.|++.+-+.+... .+..|+++-
T Consensus 200 ~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll~~iy~~~~~~~~v~eiTVED 260 (324)
T 2p0w_A 200 ATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAED 260 (324)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTCTTBCCBEESS
T ss_pred EEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 689999987654 345678999999999999999999999999998864 666666654
|
| >4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A* | Back alignment and structure |
|---|
Probab=93.93 E-value=0.44 Score=43.55 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=60.5
Q ss_pred HHcCcCccC-CHHHHHhhcCcEEEEEEC------CeEEEEEEEee-----ec-CC-----CeEEEEEEEEccCCcCCcHH
Q 010815 361 VESGALVRR-TDEELLKALDSFYVVERE------GQIIACAALFP-----FF-KE-----KCGEVAAIGVSPECRGQGQG 422 (500)
Q Consensus 361 ~~~~~~~~~-s~~~~~~~l~~~~v~~~d------g~IVG~~~l~~-----~~-~~-----~~~~I~~l~V~p~yRG~GiG 422 (500)
..+++..+. +.+.+...-+.+|++.+. +.++|++-+-. .. .. ....|.+++|++++|++|+|
T Consensus 53 ~AQ~L~~piTs~~rl~~~~~~lYll~d~~~~~g~g~viG~LKvG~K~Lf~~d~~g~~~e~~~lcIlDFyV~es~QR~G~G 132 (191)
T 4hkf_A 53 KAQQLPAPITSAAKLQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLDFYVTETLQRHGYG 132 (191)
T ss_dssp HHTTCSSCSCCHHHHHHSCCEEEEEEETTHHHHTCEEEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHH
T ss_pred HHcCCCCCccCHHHhccCCceEEEEecccccCCCceEEEEEEecCcceEEEcCCCCEEEEeccEEEeEEEeeeeeccCHH
Confidence 445555554 466666655667777654 46999876531 11 11 22457789999999999999
Q ss_pred HHHHHHHHHHHHHCCCCE--EEEEc--HHHHHHHHh-CCCeE
Q 010815 423 DKLLDYIEKKAASLGLDM--LFLLT--TRTADWFKS-RGFRE 459 (500)
Q Consensus 423 ~~Ll~~l~~~a~~~g~~~--I~l~~--~~a~~fYek-~GF~~ 459 (500)
+.|++++++.- ++.. +..+. .....|.+| +|+..
T Consensus 133 k~lfe~mL~~e---~i~p~rvA~DnPS~k~l~Fl~Khy~l~~ 171 (191)
T 4hkf_A 133 SELFDFMLKHK---QVEPAQMAYDRPSPKFLSFLEKRYDLRN 171 (191)
T ss_dssp HHHHHHHHHHH---TCCGGGSEEESCCHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHhc---CCcceeeecCCchHHHHHHHHhccCccc
Confidence 99999987443 3433 33333 456777766 45544
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.38 E-value=0.21 Score=48.25 Aligned_cols=97 Identities=11% Similarity=0.086 Sum_probs=66.7
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yR 417 (500)
.+++++..| +.+.++-...+... + ...+..++ ..+.++ ++ +|++.+.+ ..++.++. +
T Consensus 160 ~v~~~~~~d-~~l~~~d~~~~~~~----r-~~~l~~~~~~~~~~~~~--~~--~Gy~~~r~------~~igp~~a----~ 219 (288)
T 3ddd_A 160 GVVEVNKIP-NWVKEIDKKAFGDD----R-IRVLEAYMRRGARLLCA--EN--EGFGLVYR------GKIGPLVA----D 219 (288)
T ss_dssp SEEEESSCC-HHHHHHHHHHHSSC----C-HHHHHHHHHTTCEEEEE--TT--TEEEEEET------TEEEEEEE----S
T ss_pred ceeEcccCc-HHHHHHhHHhCCcc----H-HHHHHHHHcCCCcEEEE--cC--ceEEEEee------cccccccc----C
Confidence 688999999 99998865544332 1 12233333 344444 44 89988764 45556654 7
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
+.++++.|+..+++. |. +.+.+ ..+.+||+++||+.....
T Consensus 220 ~~~~a~~Ll~~l~~~----g~--~~ldv~~~n~~a~~l~~~~Gf~~~~~~ 263 (288)
T 3ddd_A 220 SPRVAEKILLKAFQL----GA--REIIIPEVNKDALELIKIFKPSQVTSC 263 (288)
T ss_dssp SHHHHHHHHHHHHHT----TC--CEEEEETTCHHHHHHHGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHhC----CC--EEEEecCCCHHHHHHHHHcCCeEeeeE
Confidence 899999999999877 44 55555 357999999999987644
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=92.03 E-value=0.52 Score=47.76 Aligned_cols=98 Identities=19% Similarity=0.125 Sum_probs=66.5
Q ss_pred CcccHHHHHHHHHHHHHc----CcCccCCHHHHHhhcC------cEE-EE--EECCeEEEEEEEeeec----C--CCeEE
Q 010815 346 KVTDLSGIKQIIQPLVES----GALVRRTDEELLKALD------SFY-VV--EREGQIIACAALFPFF----K--EKCGE 406 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~~----~~~~~~s~~~~~~~l~------~~~-v~--~~dg~IVG~~~l~~~~----~--~~~~~ 406 (500)
++++++.+++|+.+..-+ .+....+.+-+...+. .+. .+ ..++++||++.-.|.. + -...+
T Consensus 55 ~~~~l~evy~lL~~nYVED~d~~FRf~YS~efL~WaL~~Pg~~~~whiGVR~~~~~kLVgfIsaiP~~irv~~~~~~~~e 134 (385)
T 4b14_A 55 DEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAE 134 (385)
T ss_dssp SHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHhhccCCCcceEeccCCHHHHhhhhcCCCCCcceEEEEEEccCCeEEEEEeeeEEEEEEeceEeeeEE
Confidence 344556666666553211 2223455665555542 222 22 2468999999876531 1 24678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l 443 (500)
|..+||++++|+++++-.|+.++.+++...|+.+..-
T Consensus 135 INFLCVHKklRsKrlAPvLIkEitRR~n~~gI~qAvy 171 (385)
T 4b14_A 135 VNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIY 171 (385)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred EEEEEEehhHhccCccHHHHHHHHHHhhccCceEEEE
Confidence 9999999999999999999999999999999887544
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=91.54 E-value=0.47 Score=45.89 Aligned_cols=91 Identities=11% Similarity=0.086 Sum_probs=58.2
Q ss_pred cccccCC-cccHHHHHHHHHHHHHcCcCccCCHHHH---HhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 340 EGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEEL---LKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 340 ~~iR~a~-~~D~~~I~~L~~~~~~~~~~~~~s~~~~---~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
++|.+++ .+|+..+.+.|...... +.+ ..+ .-.+..+|.+..++++||++++.. + . .+-.++|+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----~ld-~~~~~~~~~~~~~~~~~~~~~~~G~~~v~~--~--~-~~~~~~~~~~ 74 (276)
T 3iwg_A 5 FKIKTIESLSDLTQLKKAYFDSSIV----PLD-GMWHFGFAPMAKHFGFYVNKNLVGFCCVND--D--G-YLLQYYLQPE 74 (276)
T ss_dssp CEEEECCCGGGGHHHHHHHHHHCSS----CCC-HHHHHTTGGGSEEEEEEETTEEEEEEEECT--T--S-EEEEEEECGG
T ss_pred eEEEEcCchHHHHHHHHHHHHhcCC----Cch-hhHhcCccccceEEEEEECCEEEEEEEEcC--C--c-eeeEEEecHH
Confidence 4566655 45566666655332222 222 222 223467899999999999999972 1 2 4459999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHC-----CCCEEEEEc
Q 010815 416 CRGQGQGDKLLDYIEKKAASL-----GLDMLFLLT 445 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~-----g~~~I~l~~ 445 (500)
||.+| +.|+..+. +.. +++.++..+
T Consensus 75 ~~~~~--~~lf~~~~---~~~~~~~~~i~~~f~~~ 104 (276)
T 3iwg_A 75 FQLCS--QELFTLIS---QQNSSVIGEVKGAFVST 104 (276)
T ss_dssp GHHHH--HHHHHHHH---TTCCTTTCCCCEEEEET
T ss_pred HHhhH--HHHHHHHH---hcCCccceecCccccCc
Confidence 99877 67755444 445 678887755
|
| >4b5o_A Alpha-tubulin N-acetyltransferase; microtubules, cilium, intraflagellar transport; HET: ACO; 1.05A {Homo sapiens} PDB: 4b5p_A* | Back alignment and structure |
|---|
Probab=91.41 E-value=0.79 Score=41.90 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=58.3
Q ss_pred HHcCcCccC-CHHHHHhhcCcEEEEEEC-------CeEEEEEEEe-----eec-CCCe-----EEEEEEEEccCCcCCcH
Q 010815 361 VESGALVRR-TDEELLKALDSFYVVERE-------GQIIACAALF-----PFF-KEKC-----GEVAAIGVSPECRGQGQ 421 (500)
Q Consensus 361 ~~~~~~~~~-s~~~~~~~l~~~~v~~~d-------g~IVG~~~l~-----~~~-~~~~-----~~I~~l~V~p~yRG~Gi 421 (500)
..+++..+. +.+.+...-+.+|++.+. +.++|+.-+- ..+ .... .-+-+|||+++.|++|+
T Consensus 60 ~AQgL~~~ITs~~kl~~~d~~lYll~d~~~~~~~~~~v~G~LKvG~K~Lfl~d~~g~~~e~~~lCvLDFYVhEs~QR~G~ 139 (200)
T 4b5o_A 60 KAQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGH 139 (200)
T ss_dssp HHTTCSSCSCCHHHHHHSCCEEEEEECTTCCCC----EEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSH
T ss_pred HHcCCCCCccCHHHhccCCcEEEEEeecccccCCCceEEEEEEEeeeeeEEECCCCCEEEeecceEEEEEechhhhhcCc
Confidence 445555554 466665555667776542 4688887542 111 1112 22448999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHh-CCCe
Q 010815 422 GDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS-RGFR 458 (500)
Q Consensus 422 G~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek-~GF~ 458 (500)
|+.|++++++.-.-. ...+..+- .....|..| .|..
T Consensus 140 Gk~LF~~ML~~e~~~-p~~la~DrPS~Kll~FL~KhY~L~ 178 (200)
T 4b5o_A 140 GRELFQYMLQKERVE-PHQLAIDRPSQKLLKFLNKHYNLE 178 (200)
T ss_dssp HHHHHHHHHHHHTCC-GGGCEEESCCHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCC-hhhccccCCCHHHHHHHHHhcCCC
Confidence 999999999654322 23344444 456777766 3443
|
| >3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A | Back alignment and structure |
|---|
Probab=91.06 E-value=2.3 Score=42.12 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=72.0
Q ss_pred cccHHHHHHHHHHHHHc-CcCccCCHHHHHhh---c--C--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcC
Q 010815 347 VTDLSGIKQIIQPLVES-GALVRRTDEELLKA---L--D--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~---l--~--~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG 418 (500)
.+|++...+++...... +++ ..+.+.+..- + + .++++..+|++||.+.+... +...+....+.+++ |.
T Consensus 190 ~~~l~~F~~l~~~t~~r~g~~-~~~~~~f~~l~~~~~~~~~~l~~a~~~g~~vA~~l~~~~--~~~~~~~~~g~~~~-~~ 265 (336)
T 3gkr_A 190 ATELDEFFKTYTTMAERHGIT-HRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKY--GRKIWYMYAGSMDG-NT 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-CCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECSS-CC
T ss_pred HHHHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHhcCcCcEEEEEEEECCEEEEEEEEEEE--CCEEEEEeeeECch-hc
Confidence 35677777777654332 332 3344433332 2 1 46677889999998877643 34566667888999 99
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEcH-------HHHHHHHhCC
Q 010815 419 QGQGDKLLDYIEKKAASLGLDMLFLLTT-------RTADWFKSRG 456 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~~~I~l~~~-------~a~~fYek~G 456 (500)
.+-+..|+-+++++|.++|++...+-.. ...+|-+++|
T Consensus 266 ~~~~~ll~~~~i~~a~~~G~~~~Dfgg~~~~~~~~Gl~~FK~~Fg 310 (336)
T 3gkr_A 266 YYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFV 310 (336)
T ss_dssp TTHHHHHHHHHHHHHHHTTCSEEEEEECSCSSTTCHHHHHHHHHC
T ss_pred cChhHHHHHHHHHHHHHCCCCEEECcCCCCCCCCccHHHHhhcCC
Confidence 9999999999999999999998777551 3455555555
|
| >4h6u_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase; HET: ACO; 2.45A {Danio rerio} PDB: 4h6z_A* | Back alignment and structure |
|---|
Probab=90.73 E-value=0.81 Score=41.83 Aligned_cols=72 Identities=17% Similarity=0.213 Sum_probs=43.6
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHh-CCCeEeceeccchhhhhhhcccCCceEEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS-RGFRECSIEMIPEERRKRINLSRNSKYYM 483 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek-~GF~~~~~~~lp~~~~~~~~~~~~s~~~~ 483 (500)
+-+|||+++.|++|+|+.|++++++.-.-. ...+..+- .....|..| .|.... -.+.|+-+.+
T Consensus 119 vLDFYVhEs~QR~G~Gk~LF~~ML~~e~~~-p~~la~DrPS~Kll~FL~KhY~L~~~-------------ipQ~NnFVVf 184 (200)
T 4h6u_A 119 VLAFYVTETLQRHGYGSELFDFMLKHKQVE-PAQMAYDRPSPKFLSFLEKRYDLRNS-------------VPQVNNFVVF 184 (200)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHTCC-GGGSEEESCCHHHHHHHHHHSCCCCB-------------CCCSSSEECB
T ss_pred eeeeeeehhhcccCcHHHHHHHHHHHcCCC-hhHccccCCCHHHHHHHHHhcCCCcc-------------CCcCccEEEe
Confidence 449999999999999999999999654322 23334443 456777766 344432 1244555555
Q ss_pred EecCCCCCC
Q 010815 484 KKLLPDTSG 492 (500)
Q Consensus 484 kkll~~~~~ 492 (500)
.....+..+
T Consensus 185 ~~fF~~~~~ 193 (200)
T 4h6u_A 185 AGFFQSRSG 193 (200)
T ss_dssp GGGC-----
T ss_pred hHHhcCCCC
Confidence 555554433
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=90.25 E-value=1.3 Score=44.67 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=66.4
Q ss_pred cccHHHHHHHHHHHH----HcCcCccCCHHHHHhhcC------cEEE-E--EECCeEEEEEEEeee----cC--CCeEEE
Q 010815 347 VTDLSGIKQIIQPLV----ESGALVRRTDEELLKALD------SFYV-V--EREGQIIACAALFPF----FK--EKCGEV 407 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~----~~~~~~~~s~~~~~~~l~------~~~v-~--~~dg~IVG~~~l~~~----~~--~~~~~I 407 (500)
+++++++++|+.+.. +..+....+.+-+...+. .+.+ + ...+++||++.-.|. .+ ....+|
T Consensus 53 ~~~l~ely~lL~~nYVEDdd~~FRF~YS~efL~WaL~pPg~~~~whvGVR~~~s~kLVgfIsaiP~~irv~~~~~~~~eI 132 (383)
T 3iu1_A 53 RGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEI 132 (383)
T ss_dssp HHHHHHHHHHHHHHSCBCTTSCEEECCCHHHHHHHHSSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhccccCCcceEEeeCCHHHHHHhccCCCCCcceEEEEEEccCCeEEEEEecceEEEEEcceEeeeeEE
Confidence 345566666665532 113335566766666552 2222 2 347899999986542 11 246799
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
..+||+++.|+++++--|++++.+.+...|+.+-.
T Consensus 133 NFLCVhKkLRsKrLAPvLIkEITRRvn~~gI~qAv 167 (383)
T 3iu1_A 133 NFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAV 167 (383)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCCEE
T ss_pred EEEEEcHhHHhCCCcHHHHHHHHHHhhhcchhhhe
Confidence 99999999999999999999999999999987643
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=89.98 E-value=1.8 Score=43.80 Aligned_cols=117 Identities=18% Similarity=0.227 Sum_probs=83.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecC-----C-----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK-----E----- 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l~------~~~v~~~dg~IVG~~~l~~~~~-----~----- 402 (500)
..+|+.+++|++++.+|+++.... ......+.+++.+|+- ..||.+++++|.+++.++..+. +
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l 305 (385)
T 4b14_A 226 KNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTL 305 (385)
T ss_dssp TTCEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEE
T ss_pred CccccCcHhhHHHHHHHHHHHHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCccee
Confidence 358999999999999999887654 2335678999999872 3577889999999999864321 1
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
..+++ .+.+...- --..|+..++-.|++.|+.-..+.. -....|.+++.|..-+
T Consensus 306 ~~AY~-fY~~~~~~----~l~~l~~dali~ak~~~fDVfnaL~~~~N~~fl~~lkF~~Gd 360 (385)
T 4b14_A 306 NAAYS-FYNVTTTA----TFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGD 360 (385)
T ss_dssp CEEEE-CCCEESSS----CHHHHHHHHHHHHHHTTCSEEEEESCTTGGGGTTTTTCEEEE
T ss_pred eeEeE-EEeeecCc----cHHHHHHHHHHHHHHCCCCEEEeccccchHHHHHHcCCCCCC
Confidence 22333 22222221 1346999999999999998666555 3456789999998865
|
| >4gs4_A Alpha-tubulin N-acetyltransferase; acetyl coenzyme A binding, cytosolic; HET: ACO; 2.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.98 E-value=2 Score=40.37 Aligned_cols=93 Identities=12% Similarity=0.163 Sum_probs=55.7
Q ss_pred HHcCcCccC-CHHHHHhhcCcEEEEEEC-------CeEEEEEEEee-----ec-CCCe-----EEEEEEEEccCCcCCcH
Q 010815 361 VESGALVRR-TDEELLKALDSFYVVERE-------GQIIACAALFP-----FF-KEKC-----GEVAAIGVSPECRGQGQ 421 (500)
Q Consensus 361 ~~~~~~~~~-s~~~~~~~l~~~~v~~~d-------g~IVG~~~l~~-----~~-~~~~-----~~I~~l~V~p~yRG~Gi 421 (500)
..+++..+. +.+.+...-+.+|++.+. +.++|+.-+-. .+ .... .-+-+|||+++.|++|+
T Consensus 60 ~AQgL~~~ITS~~kl~~~d~~lYll~d~~~~~~g~~~v~G~LKvG~K~Lfl~d~~g~~~e~~plCvLDFYVhes~QR~G~ 139 (240)
T 4gs4_A 60 KAQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGH 139 (240)
T ss_dssp HHTTCSSCSCCHHHHHTSCEEEEEEECC--------CEEEEEEEEECCEEEECTTSCEEEECCEEEEEEEECGGGTTSSH
T ss_pred HHcCCCCccccHHHHhcCCcEEEEEEecCCCCCCceeEEEEEEEeeeeeEEECCCCCEEEeccceEEEEEeecceeeecc
Confidence 445555554 455665444456666432 34788775421 11 1111 22448999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHh
Q 010815 422 GDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 454 (500)
Q Consensus 422 G~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek 454 (500)
|+.|++++++.-.-. ...+-.+- .....|..|
T Consensus 140 Gk~LF~~ML~~e~~~-p~~lA~DrPS~Kll~FL~K 173 (240)
T 4gs4_A 140 GRELFQYMLQKERVE-PHQLAIDRPSQKLLKFLNK 173 (240)
T ss_dssp HHHHHHHHHHHHTCC-GGGCEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC-HhhccccCCCHHHHHHHHH
Confidence 999999999654322 33344444 456777665
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=89.69 E-value=2.9 Score=42.43 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=84.0
Q ss_pred ccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecCC----------C
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKE----------K 403 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l~------~~~v~~~dg~IVG~~~l~~~~~~----------~ 403 (500)
.+|+++++|++++.+|++.+... .+...++.+++.+|+- ..||++++++|-.++.++..+.. .
T Consensus 263 glR~m~~~Dvp~v~~LL~~yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l~ 342 (421)
T 2wuu_A 263 GLREMKPSDVPQVRRILMNYLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNILN 342 (421)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CEE
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhhh
Confidence 59999999999999999887654 2335678999999873 35777889999999998753221 1
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
.+++ .+.+.... -=..||..++-.|++.|+.-..+.. -....|.+.+.|..-+
T Consensus 343 aAY~-fY~~~t~~----~l~~Lm~DaLi~Ak~~gfDVfNaL~~mdN~~fL~~lKFg~Gd 396 (421)
T 2wuu_A 343 AAYV-HYYAATSM----PLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGD 396 (421)
T ss_dssp EEEE-EEEEESSS----CHHHHHHHHHHHHHHTTCCEEEEESCTTGGGGTTTTTCEEEE
T ss_pred hhhh-hhhccCCc----cHHHHHHHHHHHHHHcCCcEEecccccccHHHHHhCCCCCCC
Confidence 2333 33444332 2357999999999999987665555 4456788999999865
|
| >3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A* | Back alignment and structure |
|---|
Probab=89.31 E-value=0.81 Score=43.90 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=60.1
Q ss_pred CCcceeecccccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEE-EEC---CeEEEEEEEeeecCC
Q 010815 329 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFPFFKE 402 (500)
Q Consensus 329 ~~GT~i~~d~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~d---g~IVG~~~l~~~~~~ 402 (500)
..|..|+++..+.+..++-..-....+-+. +...-|.... .+..+++ .|||+ +.| .+++|+-.-.. .+.
T Consensus 64 PPG~eIYR~~~~svfEVDG~~~k~yCQnLc-LlaKLFLdhK---tlyyDV~~F~FYVl~e~d~~g~h~vGyFSKEK-~s~ 138 (276)
T 3to7_A 64 PPGNEIYRDDYVSFFEIDGRKQRTWCRNLC-LLSKLFLDHK---TLYYDVDPFLFYCMTRRDELGHHLVGYFSKEK-ESA 138 (276)
T ss_dssp CSSEEEEECSSEEEEEEEGGGSHHHHHHHH-HHHHTTCSCC---SCTTCCTTEEEEEEEEEETTEEEEEEEEEEES-SCT
T ss_pred CCCceEEECCCEEEEEEeCCcchHHHHHHH-HHHHHhhccc---eeeeeCCCeEEEEEEEeCCCCceecccccccc-ccc
Confidence 457777777665565555333222221111 1222222111 1112233 24554 333 25777665542 223
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
....+.|+.|.|.||++|+|+.|++..=+.++..|.
T Consensus 139 ~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (276)
T 3to7_A 139 DGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 174 (276)
T ss_dssp TCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEecChHHcCCccceeehheeeeeeccCC
Confidence 446799999999999999999999999888887764
|
| >2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A | Back alignment and structure |
|---|
Probab=89.13 E-value=0.86 Score=43.88 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=38.1
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 389 ~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
++||+-.-.. .+.....+.++.|.|.||++|+|+.|++..=+.++..|.
T Consensus 131 h~vGYFSKEK-~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 179 (284)
T 2ozu_A 131 HLVGYFSKEK-HCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQ 179 (284)
T ss_dssp EEEEEEEEES-SCTTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeeeecc-cccccCcEEEEEecChhHhccHhHHHHHHHHHHhhhcCc
Confidence 6777644432 223456799999999999999999999999888887764
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=88.88 E-value=2.3 Score=43.24 Aligned_cols=98 Identities=16% Similarity=0.193 Sum_probs=67.2
Q ss_pred CCcccHHHHHHHHHHHH----HcCcCccCCHHHHHhhcC------cEEE-EE--ECCeEEEEEEEeee------------
Q 010815 345 AKVTDLSGIKQIIQPLV----ESGALVRRTDEELLKALD------SFYV-VE--REGQIIACAALFPF------------ 399 (500)
Q Consensus 345 a~~~D~~~I~~L~~~~~----~~~~~~~~s~~~~~~~l~------~~~v-~~--~dg~IVG~~~l~~~------------ 399 (500)
-.++++.++++|+.+.. +.-+....+.+-+.+.+. .+.+ +. .++++||++.-.+.
T Consensus 64 ~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~~~whiGVR~~~~~kLVgFIsgiP~~irv~~~~~~~~ 143 (421)
T 2wuu_A 64 EAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPSYIPDWHVAVRRKADKKLLAFIAGVPVTLRMGTPKYMKV 143 (421)
T ss_dssp TCHHHHHHHHHHHHHHSCC---CCEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTCCEEEEEEEEEEEEECSCCHHHHH
T ss_pred CCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhcCCCCCCcceEEEEEEccCCcEEEEEeeeeEEEEecccccccc
Confidence 34445666777765532 223335566666666552 2322 23 46899999876542
Q ss_pred -------------cCC--CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 400 -------------FKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 400 -------------~~~--~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
.+. ..++|..+||+++.|+++++--|++++.+.+...|+.+-.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~qAv 201 (421)
T 2wuu_A 144 KAQEKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILIKEVTRRVNRTNVWQAV 201 (421)
T ss_dssp HHHHTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEE
T ss_pred cccccccccchhcccceeeeeeEEEEEechhHhhccCcHHHHHHHHHHhhhcchhhee
Confidence 111 3578999999999999999999999999999999987644
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=88.76 E-value=2.1 Score=43.17 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=67.4
Q ss_pred CCcccHHHHHHHHHHHH----HcCcCccCCHHHHHhhcC------cEEE-EE--ECCeEEEEEEEeee----cCC----C
Q 010815 345 AKVTDLSGIKQIIQPLV----ESGALVRRTDEELLKALD------SFYV-VE--REGQIIACAALFPF----FKE----K 403 (500)
Q Consensus 345 a~~~D~~~I~~L~~~~~----~~~~~~~~s~~~~~~~l~------~~~v-~~--~dg~IVG~~~l~~~----~~~----~ 403 (500)
-++++++++++|+.+.. +.-+....+.+-+.+.+. .|.+ +. .++++||++.-.|. .+. .
T Consensus 32 ~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~~~~~~ 111 (392)
T 1iyk_A 32 DDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVID 111 (392)
T ss_dssp TSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTTTEEEE
T ss_pred CCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHhhhccCCCCccceEEEEEEcCCCcEEEEEeeeeEEEEEcCcCceEE
Confidence 33444566666665532 112335566666666552 2322 22 46899999987652 221 3
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
..+|..+||+++.|+++++--|++++.+.+...|+.+-.
T Consensus 112 ~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~QAv 150 (392)
T 1iyk_A 112 SVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQAL 150 (392)
T ss_dssp EEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEE
T ss_pred EEEEEEEEEcHhHhhcCCcHHHHHHHHHHhhhccceeee
Confidence 679999999999999999999999999999999987644
|
| >2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.09 E-value=0.76 Score=44.29 Aligned_cols=102 Identities=16% Similarity=0.065 Sum_probs=59.6
Q ss_pred CCcceeecccccccccCCcccHH---HHHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEE-EEC---CeEEEEEEEeee
Q 010815 329 GMGTMVASDLYEGTRTAKVTDLS---GIKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFPF 399 (500)
Q Consensus 329 ~~GT~i~~d~~~~iR~a~~~D~~---~I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~d---g~IVG~~~l~~~ 399 (500)
..|+.|+++..+.+..++-..-. +-.-|+.+++-++- .+..+++ .|||+ +.| -++||+-.-..
T Consensus 62 PPG~eIYr~~~~svfEVDG~~~k~yCQnLcLlaKLFLdhK-------tlyyDV~~FlFYVl~e~D~~g~h~vGYFSKEK- 133 (280)
T 2ou2_A 62 PPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHK-------TLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEK- 133 (280)
T ss_dssp CSSEEEEEETTEEEEEEETTTSHHHHHHHHHHHHTTCSCC-------TTTTCCTTEEEEEEEEEETTEEEEEEEEEEES-
T ss_pred CCccEEEEcCCEEEEEEeCccchHHHHHHHHHHHHhhccc-------eeeeecCceEEEEEEEecCCCcEEEEEeeccc-
Confidence 45777877666555554433322 12222222222221 1122233 24554 322 35777655542
Q ss_pred cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 400 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
.+.....+.|+.|.|.||++|+|+.|++..=+.++..|.
T Consensus 134 ~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 172 (280)
T 2ou2_A 134 ESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGK 172 (280)
T ss_dssp SCTTCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred cCccccceEEEEecchHHhcchhHHHHHHHHHHHHhhCc
Confidence 223456799999999999999999999998888876654
|
| >2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A* | Back alignment and structure |
|---|
Probab=87.39 E-value=1.2 Score=42.82 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=60.2
Q ss_pred CCCcceeecccccccccCCcccHHH---HHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEE-EEC---CeEEEEEEEee
Q 010815 328 DGMGTMVASDLYEGTRTAKVTDLSG---IKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFP 398 (500)
Q Consensus 328 ~~~GT~i~~d~~~~iR~a~~~D~~~---I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~-~~d---g~IVG~~~l~~ 398 (500)
...|+.|+++..+.+..++=..-.. -.-|+.+++-++- .+..+++ .|||+ +.| .++||+-.-..
T Consensus 63 ~PPG~eIYr~~~~svfEVDG~~~k~yCqnLcLlaKLFLdhK-------tlyyDV~~FlFYVl~e~d~~g~h~vGYFSKEK 135 (278)
T 2pq8_A 63 QPPGKEIYRKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHR-------TLYFDVEPFVFYILTEVDRQGAHIVGYFSKEK 135 (278)
T ss_dssp SCSSEEEEEETTEEEEEEETTTCHHHHHHHHHHHHTTCCCG-------GGGSCSTTEEEEEEEEEETTEEEEEEEEEEET
T ss_pred CCCCCEEEEcCCEEEEEEeCccchHHHHHHHHHHHHhhhcc-------eeeeccCceEEEEEEEecCCCceEEEEeeccc
Confidence 3457788776665555544333221 1122222222221 2222333 24554 333 35777555442
Q ss_pred ecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 399 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 399 ~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
.+.....+.|+.|.|.||++|+|+.|++..=+.++..|.
T Consensus 136 -~s~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (278)
T 2pq8_A 136 -ESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLEST 174 (278)
T ss_dssp -TCTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred -cccccCceEEEEecChhhccchhHHHHHHHHHHHhhcCc
Confidence 223457799999999999999999999998888887654
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=87.09 E-value=1.4 Score=44.84 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=66.8
Q ss_pred CcccHHHHHHHHHHHH----HcCcCccCCHHHHHhhcC------cEEE-EE--ECCeEEEEEEEeee----cC--CCeEE
Q 010815 346 KVTDLSGIKQIIQPLV----ESGALVRRTDEELLKALD------SFYV-VE--REGQIIACAALFPF----FK--EKCGE 406 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~----~~~~~~~~s~~~~~~~l~------~~~v-~~--~dg~IVG~~~l~~~----~~--~~~~~ 406 (500)
.+++++++++|+.+.. +.-+....+.+-+.+.+. .+.+ +. .++++||++.-.+. .+ -...+
T Consensus 55 ~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~~~~~~e 134 (422)
T 1iic_A 55 NKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVE 134 (422)
T ss_dssp CHHHHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhccCCCCccceEEEEEEccCCcEEEEEeceeEEEEEcceEEEeeE
Confidence 3344556666665532 122335566666666552 2322 22 46899999987652 11 14679
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
|..+||+++.|+++++--|++++.+.+...|+.+-.
T Consensus 135 INFLCVHKKLRsKRLAPVLIkEITRRvn~~gI~QAv 170 (422)
T 1iic_A 135 INFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHAL 170 (422)
T ss_dssp EEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEE
T ss_pred EEEEEechhhhhccCcHHHHHHHHHHhhhcchheee
Confidence 999999999999999999999999999999987644
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 | Back alignment and structure |
|---|
Probab=84.35 E-value=1.2 Score=46.03 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=64.6
Q ss_pred cHHHHHHHHHHHH----HcCcCccCCHHHHHhhcC------cEEE-E--EECCeEEEEEEEeeec------CCCeEEEEE
Q 010815 349 DLSGIKQIIQPLV----ESGALVRRTDEELLKALD------SFYV-V--EREGQIIACAALFPFF------KEKCGEVAA 409 (500)
Q Consensus 349 D~~~I~~L~~~~~----~~~~~~~~s~~~~~~~l~------~~~v-~--~~dg~IVG~~~l~~~~------~~~~~~I~~ 409 (500)
+++.+++|+.+.. +.-|...++.+-+.+.+. .|.+ + ...+++||++.-.+.. .-...+|..
T Consensus 168 ~l~Ely~LL~enYVEDdd~mFRF~YS~eFL~WaL~pPG~~k~WhiGVRv~~s~KLVgFIsgiP~~irv~~~~~~~~eINF 247 (496)
T 1rxt_A 168 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINF 247 (496)
T ss_dssp HHHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSSCCCCEECCC
T ss_pred HHHHHHHHHHhCcccCCCCceeeeCCHHHHHHhccCCCCccceEEEEEEccCCeEEEEEeeeEEEEEEcceEEEeeeEEE
Confidence 3455555554422 112335566666666552 2222 2 3568999999876531 125689999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEE
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 442 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~ 442 (500)
+||++++|+++++--|++.+.+.+...|+.+-.
T Consensus 248 LCVHKKLRsKRLAPVLIKEITRRvnl~gI~QAv 280 (496)
T 1rxt_A 248 LCVHKKLRSKRVAPVLIREITRRVHLEGIFQAV 280 (496)
T ss_dssp CEECSSCCCSSSHHHHHHHHHHHHTTTTCCCEE
T ss_pred EEecHhhhhccCcHHHHHHHHHHhhhcceeeee
Confidence 999999999999999999999999988987644
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=84.07 E-value=7.6 Score=39.15 Aligned_cols=122 Identities=17% Similarity=0.166 Sum_probs=83.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhc----C-------cEEEEE-ECCeEEEEEEEeeecC-----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKAL----D-------SFYVVE-REGQIIACAALFPFFK----- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l----~-------~~~v~~-~dg~IVG~~~l~~~~~----- 401 (500)
..+|+++++|++++.+|++.+... .+...++.+++.+|+ + ..||++ .+++|-.++.++..+.
T Consensus 206 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~eev~Hw~lp~~~~~~~~Vi~tYVve~~~g~ITDf~SFY~Lpstv~~~ 285 (392)
T 1iyk_A 206 KGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDN 285 (392)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSC
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHHcccCCCCCCCceEEEEEEECCCCcEeeEEEEEECcccccCC
Confidence 359999999999999999987653 233567889999887 2 256777 5789999999874321
Q ss_pred C-----CeEEEEEEEEccCCcCCcH---HHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEece
Q 010815 402 E-----KCGEVAAIGVSPECRGQGQ---GDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 462 (500)
Q Consensus 402 ~-----~~~~I~~l~V~p~yRG~Gi---G~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~ 462 (500)
. ..+++...+....+... + =..||..++-.|++.|+.-..+.. -....|.+.+.|..-+-
T Consensus 286 ~~~~~l~aAY~fY~~~~~~~~~~-l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~GdG 354 (392)
T 1iyk_A 286 AQHDELGIAYLFYYASDSFEKPN-YKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDG 354 (392)
T ss_dssp SSCSEECEEEEEEEEETTTTSTT-HHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEEE
T ss_pred Cccchhhhhhhhhcccccccccc-ccchHHHHHHHHHHHHHHcCCcEEecccccccHHHHHHCCCCCCCC
Confidence 1 23454223322222211 2 346888888889988988666655 44567889999998653
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=83.82 E-value=3.6 Score=41.41 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=81.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhcC------cEEEEEE-CCeEEEEEEEeeecC-----C----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFK-----E---- 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l~------~~~v~~~-dg~IVG~~~l~~~~~-----~---- 402 (500)
..+|+++++|++++.+|++++... .+....+.+++.+|+- ..||+++ +|+|-.++.++..+. +
T Consensus 223 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hw~lp~~~Vi~syVve~~~g~ITDf~SFY~Lpstvl~~~~~~~ 302 (383)
T 3iu1_A 223 AGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKS 302 (383)
T ss_dssp TTEEECCGGGHHHHHHHHHHHGGGSSEEEECCHHHHHHHHSCC-CCEEEEEEECTTSCEEEEEEEEECCEEETTCSSCCE
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHhhhhcccCCCeEEEEEEECCCCcEeeEEEEEEccceecCCCCcce
Confidence 358999999999999999887544 2335678999999973 2466665 689999999875322 1
Q ss_pred -CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 403 -KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 403 -~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
..+++ .+.+...-+ =..||..++-.|++.|+.-..+.. -....|.+++.|..-+
T Consensus 303 l~aAY~-fY~~~t~~~----l~~Lm~DaLi~Ak~~gfDVFNaL~~m~N~~fL~~lKFg~Gd 358 (383)
T 3iu1_A 303 LKAAYS-FYNVHTQTP----LLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD 358 (383)
T ss_dssp ECEEEE-CCCBCSSSC----HHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred eeeEEE-EEEeecCCC----HHHHHHHHHHHHHHcCCeEEEcccccccHHHHHHcCCCCCC
Confidence 12222 222222211 247899999999999998766666 4567788999998765
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=82.66 E-value=8.9 Score=39.04 Aligned_cols=122 Identities=17% Similarity=0.156 Sum_probs=83.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHc-CcCccCCHHHHHhhcC---c---------EEEEE-ECCeEEEEEEEeeecC----
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD---S---------FYVVE-REGQIIACAALFPFFK---- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~-~~~~~~s~~~~~~~l~---~---------~~v~~-~dg~IVG~~~l~~~~~---- 401 (500)
..+|+++++|++++.+|++.+... .+...++.+++.+|+- . .||++ .+++|-.++.++..+.
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hwflp~~~~~~~~~Vi~tYVvE~~~g~ITDf~SFY~Lpstv~~ 305 (422)
T 1iic_A 226 AGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILN 305 (422)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECS
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHHHHHccCCCCCCCCCceEEEEEEECCCCcEeeEEEEEEccccccC
Confidence 359999999999999999987653 3335678899998872 2 56776 5789999999874321
Q ss_pred -C-----CeEEEEEEEEccCCcC--Cc----------HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 402 -E-----KCGEVAAIGVSPECRG--QG----------QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 402 -~-----~~~~I~~l~V~p~yRG--~G----------iG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
. ..+++-..+....+.- .+ ==..||..++-.|++.|+.-..+.. -....|.+.+.|-.-+
T Consensus 306 ~~kh~~l~aAY~fY~~~t~~~~~~~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~Gd 384 (422)
T 1iic_A 306 NTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGD 384 (422)
T ss_dssp CSSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred CCccchhhhhhhhhheecccccccccccchhhhhhhhhHHHHHHHHHHHHHHcCCCEEecccccccHHHHHhCCCCCCC
Confidence 1 2345533333322211 11 1346888899999999988666655 4456788999998765
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=81.54 E-value=9.6 Score=37.98 Aligned_cols=113 Identities=4% Similarity=-0.087 Sum_probs=69.3
Q ss_pred ccccCC-cccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCC--CeEEEEE
Q 010815 341 GTRTAK-VTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE--KCGEVAA 409 (500)
Q Consensus 341 ~iR~a~-~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~~--~~~~I~~ 409 (500)
.+++++ .+| +.+.+++......... ..++...+...+ ..+++.+.+|+++|++.+...... +...|..
T Consensus 155 ~v~~~~~~~d-~~~~~~~~~~~~~~~g~~~r~~~~w~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~~~~~~~~~~~~~I~~ 233 (396)
T 2ozg_A 155 PLEPVVLKNN-PIFHELYQQQAQLTHGYLDRHPAIWQGLNRTLDTETLYSYLIGDKDKPQGYIIFTQERTRDGSILRIRD 233 (396)
T ss_dssp CEEECCCTTC-HHHHHHHHHHHHHSTTCEECCHHHHHHHTCCCTTCCCEEEEEEETTEEEEEEEEEEEECSSCEEEEEEE
T ss_pred eEEECCccch-HHHHHHHHHHHhhCCCCccCCHHHHHHHhcccCCCceEEEEECCCCCccEEEEEEEcCCCCcceEEEEE
Confidence 578888 888 8888888775544332 344444444333 345666789999999998865421 1456655
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEe
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFREC 460 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~ 460 (500)
++.. .......|+.++.... ..+..|.+.+ .....|....|++..
T Consensus 234 l~a~----~~~a~~~L~~~l~~~~--~~~~~v~~~~p~~~~l~~~l~~~~~~~~ 281 (396)
T 2ozg_A 234 WVTL----SNPAVQSFWTFIANHR--SQIDKVTWKSSVIDALTLLLPEQSATIR 281 (396)
T ss_dssp EEEC----SHHHHHHHHHHHHTTT--TTCSEEEEEECTTCSGGGGSSSCCCEEE
T ss_pred eeeC----CHHHHHHHHHHHHhHh--hhheEEEEEcCCCCchhhhCCCCcceeE
Confidence 5533 4567788888777532 1356666665 233444555666543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 500 | ||||
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 3e-22 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 2e-10 | |
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 2e-21 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 7e-16 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 2e-10 | |
| d1e19a_ | 313 | c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcu | 3e-14 | |
| d1qsra_ | 162 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 2e-11 | |
| d2gana1 | 182 | d.108.1.1 (A:1-182) Hypothetical protein PH0736 {P | 2e-11 | |
| d1i12a_ | 157 | d.108.1.1 (A:) Glucosamine-phosphate N-acetyltrans | 1e-10 | |
| d1ygha_ | 164 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 1e-10 | |
| d1n71a_ | 180 | d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransfera | 2e-10 | |
| d1r57a_ | 102 | d.108.1.1 (A:) Hypothetical protein SA2309 {Staphy | 4e-10 | |
| d1yx0a1 | 151 | d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bac | 2e-09 | |
| d1z4ra1 | 162 | d.108.1.1 (A:497-658) Catalytic domain of GCN5 his | 2e-09 | |
| d1b7ba_ | 307 | c.73.1.1 (A:) Carbamate kinase {Enterococcus faeci | 6e-09 | |
| d2hv2a2 | 285 | d.108.1.10 (A:2-286) Hypothetical protein EF1021 { | 9e-09 | |
| d1sqha_ | 297 | d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fr | 3e-08 | |
| d1y9ka1 | 152 | d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillu | 5e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 6e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 2e-05 | |
| d1vkca_ | 149 | d.108.1.1 (A:) Putative acetyltransferase PF0028 { | 1e-07 | |
| d1y9wa1 | 140 | d.108.1.1 (A:1-140) Probable acetyltransferase BC2 | 2e-07 | |
| d2i00a2 | 291 | d.108.1.10 (A:10-300) Putative acetyltransferase E | 2e-07 | |
| d2aj6a1 | 118 | d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S | 3e-07 | |
| d1m4ia_ | 181 | d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransfera | 1e-06 | |
| d2fiaa1 | 157 | d.108.1.1 (A:1-157) Probable acetyltransferase EF1 | 1e-06 | |
| d1z4ea1 | 150 | d.108.1.1 (A:4-153) Transcriptional regulator BH19 | 2e-06 | |
| d2i6ca1 | 160 | d.108.1.1 (A:1001-1160) Putative acetyltransferase | 3e-06 | |
| d2g3aa1 | 137 | d.108.1.1 (A:1-137) Probable acetyltransferase Atu | 7e-06 | |
| d1u6ma_ | 189 | d.108.1.1 (A:) Putative acetyltransferase EF0945 { | 1e-04 | |
| d1p0ha_ | 308 | d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacter | 2e-04 | |
| d1tiqa_ | 173 | d.108.1.1 (A:) Protease synthase and sporulation n | 2e-04 | |
| d1ghea_ | 170 | d.108.1.1 (A:) Tabtoxin resistance protein {Pseudo | 3e-04 | |
| d1cjwa_ | 166 | d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep | 6e-04 | |
| d1s3za_ | 147 | d.108.1.1 (A:) Aminoglycoside N-acetyltransferase | 9e-04 | |
| d1ufha_ | 155 | d.108.1.1 (A:) Putative acetyltransferase YycN {Ba | 0.001 |
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 94.5 bits (234), Expect = 3e-22
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 14/199 (7%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
+QDI L + GI+ ++V G I +++ + G E + +R+TD +++ G
Sbjct: 43 IQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGK- 101
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
N + + V + + + D G G+VKKV
Sbjct: 102 -------------INKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKV 148
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE 190
+ + ++ + +++ +G G N N A A ++ A+KLI + D + +
Sbjct: 149 NPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLK 208
Query: 191 SGHLIRFLTLQEADSLIRQ 209
G LI LT EA+ LIR
Sbjct: 209 DGKLISTLTPDEAEELIRD 227
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 59.4 bits (143), Expect = 2e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 290 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
|
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 92.1 bits (228), Expect = 2e-21
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-I 69
+D+ + +GI V+V G QI LL E+ ++ R+TD+ ++ GG +
Sbjct: 48 ARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQV 107
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVD 120
I ++ RHG S+ +G++ + AK+ V + +D
Sbjct: 108 NKDIVNLIN---------RHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIID 154
Query: 121 YGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLI 180
G GEV V+V + + G + +++ +G S+GE N N VA A A++A+KL+
Sbjct: 155 IGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLM 214
Query: 181 CIIDGP-ILDESGHLIRFLTLQEADSLIRQ 209
+ + ++D+ G ++ L+ ++ + LI
Sbjct: 215 LLTNIAGLMDKQGQVLTGLSTEQVNELIAD 244
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 76.1 bits (186), Expect = 7e-16
Identities = 47/203 (23%), Positives = 75/203 (36%), Gaps = 9/203 (4%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
D+AFL + GI V+V G QI +L G E + G +R+T E L A G
Sbjct: 47 AADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQV 106
Query: 71 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 130
L + G+ ++ + D G G+V +V
Sbjct: 107 GRELVNLINAHGPYAVGITGEDAQLF---------TAVRRSVTVDGVATDIGLVGDVDQV 157
Query: 131 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE 190
+ M + + G + ++S L + G V N N A A A A+ A+KL+ + D L
Sbjct: 158 NTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYT 217
Query: 191 SGHLIRFLTLQEADSLIRQRVKQ 213
L + + Q +
Sbjct: 218 RWPDRDSLVSEIDTGTLAQLLPT 240
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.1 bits (142), Expect = 2e-10
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 290 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334
G + ++ A GV H++DG + +L+ELF G GT V
Sbjct: 244 GMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKV 288
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 71.1 bits (173), Expect = 3e-14
Identities = 29/231 (12%), Positives = 59/231 (25%), Gaps = 34/231 (14%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-I 69
+ IA + G V+ G Q+ LL G + A + G I
Sbjct: 33 ARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMI 92
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA------------KRKGVVD 117
+ ++ +L + + + + + + KG +
Sbjct: 93 QQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIV 152
Query: 118 GVDYG--------ATGEVKKVDVTRMR--------ERLDGGCLVILSNLGYSSSGEVLNC 161
D G + V+ ++ GG V + G
Sbjct: 153 KEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVI 212
Query: 162 NTYEVATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEADSLI 207
+ A + AD + + D E +R + ++E
Sbjct: 213 DKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYY 263
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Score = 60.1 bits (145), Expect = 2e-11
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
S +++ + ++I + ++ EVA + V+ + +G G +L++ + ++
Sbjct: 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107
Query: 440 MLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489
L A +FK +GF + M E+ + I + P
Sbjct: 108 YLLTYADNFAIGYFKKQGFTK-EHRMPQEKWKGYIKDYDGGTLMECYIHPY 157
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 60.2 bits (145), Expect = 2e-11
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 321 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 379
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 380 SFYVVEREGQIIACAALFP--------------FFKEKCGEVAAIGVSPECRGQGQGDKL 425
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 426 LDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECS 461
L++ K+ SLG D + + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKGFREIM 166
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.1 bits (139), Expect = 1e-10
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 24/146 (16%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------------------FYVV 384
R + DL + + ++ L G + + +L+K + V
Sbjct: 8 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 67
Query: 385 EREGQIIACAALFPFFKE-----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 68 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 127
Query: 440 MLFLLTTRTA-DWFKSRGFRECSIEM 464
+ L +++ GF +EM
Sbjct: 128 KIILDCDEKNVKFYEKCGFSNAGVEM 153
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.8 bits (139), Expect = 1e-10
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
S V+ + ++ PF K + E+ +S + +G G L+++++ +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108
Query: 440 MLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489
FL +FK +GF + I + I +LP
Sbjct: 109 KYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYIKDYEGGTLMQCSMLPR 159
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Length = 180 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Score = 58.0 bits (139), Expect = 2e-10
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 333 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 392
M+ S+ ++ LS + ++ P + EE++ + +++
Sbjct: 1 MIISE-FDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEV-EEMMNPERIAVAAVDQDELVG 58
Query: 393 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 445
P + E+ + V R G +L++Y+EK+ AS G ++L T
Sbjct: 59 FIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGT 111
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Score = 54.6 bits (131), Expect = 4e-10
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 370 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 429
++ E+ + + FY+ + E +A + F + GVS E GQG G KLL +
Sbjct: 2 SNLEIKQGENKFYIGDDENNALAEIT-YRFVDNNEINIDHTGVSDELGGQGVGKKLLKAV 60
Query: 430 EKKAASLGLDMLFLLTTRTADWFK 453
+ A L ++ + +
Sbjct: 61 VEHARENNLKIIASCSF-AKHMLE 83
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Score = 54.0 bits (129), Expect = 2e-09
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 346 KVTDLSGIKQIIQPLVESGALVRR-TDEELLKALD---------SFYVVEREGQIIACAA 395
K+ DL+G +Q++ + E + + E + AL +F+ ++ C A
Sbjct: 4 KIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGA 62
Query: 396 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----- 450
L GE+ ++ S +G ++L +I ++A G + L L T A
Sbjct: 63 LKELDTR-HGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPAR 121
Query: 451 -WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
++S GF+ C E NS + KKL
Sbjct: 122 KLYESFGFQYC-------EPFADYGEDPNSVFMTKKL 151
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 2e-09
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
+ ++G++I F + E+ V+ + +G G L++++++ +
Sbjct: 54 TLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILY 113
Query: 441 LFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLP 488
A +FK +GF + +P+ R M +L P
Sbjct: 114 FLTYADEYAIGYFKKQGFSK--DIKVPKSRYLGYIKDYEGATLMECELNP 161
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Score = 55.0 bits (131), Expect = 6e-09
Identities = 21/229 (9%), Positives = 56/229 (24%), Gaps = 30/229 (13%)
Query: 11 VQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 70
+ L G R ++ G Q+ LL ++ D+ +
Sbjct: 31 SAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAMTQGSIGYWLS 90
Query: 71 MMIEAKLSPGPP-----------ICNIRRHGDSSRWHEVGVSVASGNFLAAKRK------ 113
+ +L+ + + + +G + A +
Sbjct: 91 NALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKE 150
Query: 114 --GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL------GYSSSGEVLNCNTYE 165
G + + + + + + I G G +
Sbjct: 151 DAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDF 210
Query: 166 VATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEADSLIRQ 209
+ A ++AD L+ + + + +T+ E + +
Sbjct: 211 ASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQA 259
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Score = 54.5 bits (130), Expect = 9e-09
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 8/129 (6%)
Query: 343 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF- 400
+ ++ + ++ + R+ E L + Y + Q+ + PF
Sbjct: 6 KKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQV 65
Query: 401 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 455
+ + + PE RG+G ++ + A + L L + +++
Sbjct: 66 NFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVA-LSYLAPFSYPFYRQY 124
Query: 456 GFRECSIEM 464
G+ + +
Sbjct: 125 GYEQTFEQA 133
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 52.7 bits (126), Expect = 3e-08
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 287 RLNGYLSELAAA--AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG--T 342
L RGV + + L D DL
Sbjct: 117 LLTNVDLGFCNRVKELAVSRGVTAIQPRQ-----CFGMVLSHEDAF-CAKVPDLPSEFEI 170
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 401
R + D + + G + L++ S + + G++IA F
Sbjct: 171 RRLRAEDAAMVHDSWPN---KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQNDF-- 225
Query: 402 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 457
+ + V P+ +G G L + ++ A L R+ K G+
Sbjct: 226 ---SGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGY 282
Query: 458 RECS----IEMIP 466
++ I+++P
Sbjct: 283 QKDLVNEWIKLVP 295
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Score = 50.1 bits (119), Expect = 5e-08
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 440
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 37 TYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 95
Query: 441 LFLLT----TRTADWFKSRGFRECSIE 463
L + T ++ GFR SI+
Sbjct: 96 LEVGTGNSSVSQLALYQKCGFRIFSID 122
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 51.7 bits (122), Expect = 6e-08
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 290 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336
G + ++ AA R + V + L LF MGT + +
Sbjct: 213 GMIVKVNAALDAARTLGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 43.6 bits (101), Expect = 2e-05
Identities = 39/202 (19%), Positives = 71/202 (35%), Gaps = 17/202 (8%)
Query: 11 VQDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 69
+ R V+V G +D+L+ K R+T ++ + A G
Sbjct: 24 FSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGT 83
Query: 70 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 129
+ I + +V + G G +
Sbjct: 84 ANKTLLAWAKKHQIAAVGLFLGDGDSVKV----------------TQLDEELGHVGLAQP 127
Query: 130 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 189
+ L+ G L ++S++G + G+++N N + ATA A + AD ++ ILD
Sbjct: 128 GSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILD 187
Query: 190 ESGHLIRFLTLQEADSLIRQRV 211
G I +T +A+ LI Q +
Sbjct: 188 GKGQRIAEMTAAKAEQLIEQGI 209
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Score = 48.6 bits (115), Expect = 1e-07
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 381 FYVVEREGQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL 436
F + +++ + K + I V RG G G LL E+ A
Sbjct: 55 FVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKER 114
Query: 437 GLDMLFLLTTRT---ADWFKSRGFRECSIEMIPEERRKRI 473
G + L W++ RG++ ++ M K I
Sbjct: 115 GAKKIVLRVEIDNPAVKWYEERGYKARALIM-----EKPI 149
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Score = 48.3 bits (114), Expect = 2e-07
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYHLH--IDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 440 MLFLLTTRT-ADWFKSR-GFRECSIEMIPEERRKRINLSRNSKYYMKKL 486
++ L + A F + G+RE + + ++ K+L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREYG-------VVEDHPKGHSQHFFEKRL 140
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Score = 50.7 bits (120), Expect = 2e-07
Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 18/164 (10%)
Query: 343 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKAL---DSFYVVEREGQII 391
+ + + +++ + ESG +R + + + + E Q+I
Sbjct: 4 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 63
Query: 392 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 445
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 64 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 122
Query: 446 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 489
+++ +G+ S ++ + R ++ + +++L D
Sbjct: 123 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVD 166
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Score = 47.2 bits (111), Expect = 3e-07
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 343 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEE------------LLKALDSFYVVERE 387
RT + + IKQI L+ + + L D Y+ E E
Sbjct: 2 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 61
Query: 388 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 62 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI 115
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 343 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYV-VEREGQIIACAALFPF- 399
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 400 -----FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 454
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 455 RGFR 458
RG+
Sbjct: 129 RGWL 132
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Score = 46.2 bits (108), Expect = 1e-06
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEELLKALD--SFYVVEREGQIIA 392
R A +L I Q + + + + ++ + + Y++ E I +
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFS 63
Query: 393 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW- 451
A ++ + SP +G G L +EK+A G ++ T T
Sbjct: 64 MATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRM 123
Query: 452 ---FKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487
F+S+GF + E + L S Y K L
Sbjct: 124 IRFFESKGFTKI------HESLQMNRLDFGSFYLYVKEL 156
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Length = 150 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Score = 45.7 bits (107), Expect = 2e-06
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 20/142 (14%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKALDS-----FYVVEREGQII 391
R A DL + ++ V + + K + V +I+
Sbjct: 5 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 64
Query: 392 ACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 445
+ + + RGQG G +L+ + ++A G ++ L T
Sbjct: 65 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 124
Query: 446 ---TRTADWFKSRGFRECSIEM 464
+++ GF+ +
Sbjct: 125 KQRPDALRFYEQLGFKASHEGL 146
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.1 bits (105), Expect = 3e-06
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 18/158 (11%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 394
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 395 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI-----EKKAASLGLDMLFLLTTRTA 449
+ + + + V+P RG G L+ + E+ A L F
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 450 DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487
+ G++ +I + +R+ L M K L
Sbjct: 126 LLYTQLGYQPRAIAERHDPDGRRVAL-----IQMDKPL 158
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 43.3 bits (101), Expect = 7e-06
Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 14/146 (9%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 402
+ V D K I PLV R E + L + + + +
Sbjct: 4 VLSDVADAEAEKAIRDPLVAYNL--ARFGESDKRDL-NITIRNDDNSVTGGLVGHTARGW 60
Query: 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR-GFREC 460
V + V RGQG KLL E++A G ++ T R GF +
Sbjct: 61 LY--VQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKI 118
Query: 461 SIEMIPEERRKRINLSRNSKYYMKKL 486
++ ++ + K+
Sbjct: 119 -------GSLGPLSSGQSITWLEKRF 137
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Score = 40.4 bits (93), Expect = 1e-04
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 60/195 (30%)
Query: 343 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDSFY-------------VVER 386
R+A D I +++ + +E L ++E+++ L V E
Sbjct: 4 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 63
Query: 387 EGQIIACAALFPFFKEK------------------------------CGEVAAIGVSPEC 416
G++ A +P EK + I V
Sbjct: 64 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 123
Query: 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 472
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 124 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLY-- 181
Query: 473 INLSRNSKYYMKKLL 487
+M+K +
Sbjct: 182 --------NHMQKEV 188
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 9/129 (6%)
Query: 343 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS-------FYVVEREGQIIACAA 395
+ ++ ++ + V E++L+ L G II
Sbjct: 6 SALTADEQRSVRALVT-ATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLN 64
Query: 396 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 455
L P + G +A + V P+ R +G G + K A +
Sbjct: 65 LSPP-RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASAL 123
Query: 456 GFRECSIEM 464
G +
Sbjct: 124 GLVGVRELI 132
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} Length = 173 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Score = 39.9 bits (92), Expect = 2e-04
Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 33/172 (19%)
Query: 343 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDSFYVVE 385
+ DL ++Q+ ++ +ES + ++EL F+ +
Sbjct: 5 KKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIY 64
Query: 386 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 439
+ +I + + E+ I + + G G LL+ + A
Sbjct: 65 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKK 124
Query: 440 MLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487
++L ++K GF + + + M K L
Sbjct: 125 NIWLGVWEKNENAIAFYKKMGFVQTG------AHSFYMGDEEQTDLIMAKTL 170
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Score = 39.5 bits (91), Expect = 3e-04
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 362 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKC---GEVAAIGVSPECRG 418
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 42 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 101
Query: 419 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW---FKSRGFRECSIEMIPEERRKRINL 475
+G G +L+D +E+ A +L L T + + + + +P
Sbjct: 102 RGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGE--LPGYCATPDGR 159
Query: 476 SRNSKYYMKKL 486
+ Y K L
Sbjct: 160 LHPTAIYFKTL 170
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 38.4 bits (88), Expect = 6e-04
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 21/139 (15%)
Query: 343 RTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 397
R D +G+ +I + + L + EG+++A
Sbjct: 9 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68
Query: 398 PFFKEKC--------------GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443
+ +E+ + A+ V R QG+G LL + +
Sbjct: 69 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 128
Query: 444 LTTRTA--DWFKSRGFREC 460
L A +++ GF
Sbjct: 129 LMCEDALVPFYQRFGFHPA 147
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} Length = 147 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Score = 37.5 bits (86), Expect = 9e-04
Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 16/143 (11%)
Query: 343 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 399
R T L + + + L A + +E L + ++ +G I A
Sbjct: 6 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 65
Query: 400 FK-------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 448
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 66 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 125
Query: 449 ADWFKSRGFRECSIEMIPEERRK 471
++ GF E E + R++
Sbjct: 126 QKVHQALGFEE--TERVIFYRKR 146
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} Length = 155 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Score = 37.3 bits (85), Expect = 0.001
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 381 FYVVEREGQIIACAALFPFFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438
+ + E I+ + + ++ + G+ RG+G + L +++ A S+G+
Sbjct: 62 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 121
Query: 439 DMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI 473
L L ++ GF+E + M K++
Sbjct: 122 RKLSLHVFAHNQTARKLYEQTGFQETDVVM-----SKKL 155
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 500 | |||
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 100.0 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 100.0 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 100.0 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 99.98 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 99.97 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 99.96 | |
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.84 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.82 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.74 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 99.74 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 99.69 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 99.68 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 99.68 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 99.66 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 99.65 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 99.65 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 99.64 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 99.64 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 99.64 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.63 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 99.61 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 99.61 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 99.61 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 99.61 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 99.6 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 99.6 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 99.6 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 99.59 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 99.58 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.58 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 99.57 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 99.57 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 99.56 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 99.56 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.55 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 99.55 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.54 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 99.53 | |
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.52 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 99.52 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 99.51 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.51 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 99.51 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 99.51 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 99.51 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 99.5 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 99.48 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 99.47 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 99.47 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 99.46 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 99.42 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 99.39 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 99.35 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 99.35 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 99.31 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 99.29 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 99.27 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 99.25 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 99.2 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 99.19 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 99.17 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 99.14 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 99.13 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 99.12 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 99.08 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 99.03 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 99.0 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 98.98 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 98.87 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 98.61 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 98.47 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.43 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 98.27 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 97.65 | |
| d1ylea1 | 338 | Arginine N-succinyltransferase, alpha chain, AstA | 97.48 | |
| d1xmta_ | 95 | Hypothetical protein AT1g77540 {Thale cress (Arabi | 97.34 | |
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 96.33 | |
| d1rxta1 | 141 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 94.84 | |
| d1iyka1 | 165 | N-myristoyl transferase, NMT {Yeast (Candida albic | 94.63 | |
| d1iica1 | 185 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 94.42 | |
| d1boba_ | 315 | Histone acetyltransferase HAT1 {Baker's yeast (Sac | 93.94 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 93.08 | |
| d2d4pa1 | 130 | Hypothetical protein TTHA1254 {Thermus thermophilu | 92.67 | |
| d1iica2 | 237 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 90.59 | |
| d2giva1 | 271 | Probable histone acetyltransferase MYST1 {Human (H | 90.0 | |
| d1iyka2 | 227 | N-myristoyl transferase, NMT {Yeast (Candida albic | 89.09 | |
| d2ozua1 | 270 | Histone acetyltransferase MYST3 {Human (Homo sapie | 88.54 | |
| d1fy7a_ | 273 | Histone acetyltransferase ESA1 {Baker's yeast (Sac | 86.43 | |
| d1ne9a1 | 164 | Peptidyltransferase FemX {Weissella viridescens [T | 80.32 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=7.6e-46 Score=370.62 Aligned_cols=245 Identities=28% Similarity=0.468 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||+.|+..|.++|||||||||++.+++++++++++++|.|+|++++++++ +.+++.+|..+++ .
T Consensus 44 ~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~gi~~~~~~g~RvT~~~~l~~~~~~~~g~vn~~lv~---------~ 114 (300)
T d2bufa1 44 KAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVN---------L 114 (300)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHcCCcEEEecChHHHHHHHHHhcccCceecCCcccccchhHHHHHHHHHhHHHHHHHH---------H
Confidence 56899999999999999999999999999999999999999999999999999999 6778899999999 5
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCcc---------CCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCC
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSG 156 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~---------~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g 156 (500)
|.++|++ ++++++.|++++.+++..+. +++|+||+|.|+.||++.|+.||++|+|||++|++++.+|
T Consensus 115 l~~~g~~----a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~id~g~~G~v~~v~~~~i~~ll~~g~Ipvis~~~~~~~G 190 (300)
T d2bufa1 115 INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNG 190 (300)
T ss_dssp HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTS
T ss_pred HHhcCCc----ccccCCCccceEEeecccccccCcccccccccccCcccceeecchhHHHHHhcCCCeEEecccccCccc
Confidence 6788988 99999999999998886544 4579999999999999999999999999999999999999
Q ss_pred CeeecCHHHHHHHHHHHcCCCEEEEEecCccc-CCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 157 EVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 157 ~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv-~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
+.+|+|+|++|+++|.+|+||+|||||||||+ +.+++++++++.+++++++.++.
T Consensus 191 ~~~nin~D~~Aa~lA~~L~AdkLI~Ltdv~Gv~~~~g~~~~~l~~~~~~~li~~~~------------------------ 246 (300)
T d2bufa1 191 ESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGT------------------------ 246 (300)
T ss_dssp CEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEECHHHHHHHHHTTC------------------------
T ss_pred chhcccHHHHHHHHHHHcCCCeEEEEcCCCccccCCCcchhhccHHHHHHHHHcCC------------------------
Confidence 99999999999999999999999999999988 57899999999999999986542
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
+ +| | |.+||++|..||++||+||||+||+
T Consensus 247 -----i------------------------~g-G---------------------M~~Kl~aa~~a~~~Gv~rv~Ii~g~ 275 (300)
T d2bufa1 247 -----I------------------------YG-G---------------------MLPKIRCALEAVQGGVTSAHIIDGR 275 (300)
T ss_dssp -----S------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred -----c------------------------Cc-h---------------------HHHHHHHHHHHHHcCCCEEEEecCC
Confidence 1 12 3 9999999999999999999999999
Q ss_pred cCceeeehhhhcCCCcceeecccc
Q 010815 316 IGGVLLLELFKRDGMGTMVASDLY 339 (500)
Q Consensus 316 ~~~~ll~~l~~~~~~GT~i~~d~~ 339 (500)
.|++|+.|+|++++.||+|+++.|
T Consensus 276 ~~~~ll~eLft~~g~GT~I~~~~~ 299 (300)
T d2bufa1 276 VPNAVLLEIFTDSGVGTLISNRKR 299 (300)
T ss_dssp STTHHHHHHSSTTCCSEEEECCCC
T ss_pred CCCHHHHHHcCCCCceeEEecCCC
Confidence 999999999999999999999876
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.7e-41 Score=336.20 Aligned_cols=242 Identities=29% Similarity=0.466 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||+.|++.|.++|||||||++++..+.++++++++.++.|+|+.+.++++ +.+++.+|..++. .
T Consensus 39 ~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~i~~~~~~~~~~t~~~~~~~~~~~~~~~~n~~~~~---------~ 109 (282)
T d2btya1 39 KKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVM---------N 109 (282)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCccchhhHHHcCCcceeccCccccchhhHHHHHHHHhchhhHHHHH---------H
Confidence 56899999999999999999999999999999999999999999999999999999 7889999999988 4
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHH
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYE 165 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~ 165 (500)
|.++|++ ++++++.+.....+.. ..+..|++++|+++.||.+.|+.+|+.|.|||++|++++++|+.+|+|+|+
T Consensus 110 l~~~g~~----a~~l~~~~~~~~~~~~--~~~~~d~~~~g~~~~v~~~~i~~lL~~~~ipvi~~~~~~~~g~~~nl~~d~ 183 (282)
T d2btya1 110 LNLHGGR----AVGICGKDSKLIVAEK--ETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADT 183 (282)
T ss_dssp HHTTTCC----EEEEETTGGGSEEEEE--CCTTCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHH
T ss_pred HHhcCCC----eeeeeccccceeEecc--ccccccccccccccccChHHHHHHHhCCCceeecCcccCCcceeeeccccc
Confidence 6788887 8999988887777654 357789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEecCcccCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccC
Q 010815 166 VATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQ 245 (500)
Q Consensus 166 ~a~~lA~~l~Ad~li~lTdv~gv~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (500)
+|+++|.+|+||+|||+||+||+.+++++|+++++.+++.++.++. +
T Consensus 184 ~aa~iA~~l~AdkLI~ltdv~Gl~~d~~~i~~~~~~~~~~~~~~~~-----------------------------~---- 230 (282)
T d2btya1 184 AAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGT-----------------------------V---- 230 (282)
T ss_dssp HHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTTTC-----------------------------S----
T ss_pred hhHHHhhhcCCceeEEeccccceecCccccccCCHHHHHHHHHcCC-----------------------------c----
Confidence 9999999999999999999999988999999999999988864421 1
Q ss_pred CCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhh
Q 010815 246 NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELF 325 (500)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~ 325 (500)
+| | |.+||++|..||++||+||||+||+.|++++.++|
T Consensus 231 --------------------tg-G---------------------M~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~elf 268 (282)
T d2btya1 231 --------------------TG-G---------------------MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIF 268 (282)
T ss_dssp --------------------CT-T---------------------HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHS
T ss_pred --------------------Cc-h---------------------HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHh
Confidence 22 3 99999999999999999999999999999999999
Q ss_pred hcCCCcceeeccc
Q 010815 326 KRDGMGTMVASDL 338 (500)
Q Consensus 326 ~~~~~GT~i~~d~ 338 (500)
++++.||+|++++
T Consensus 269 t~~g~GT~I~~~e 281 (282)
T d2btya1 269 SRKGIGTMIKELE 281 (282)
T ss_dssp SSSCSSEEECCCC
T ss_pred CCCCceEEEEeCC
Confidence 9999999998764
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.1e-39 Score=324.55 Aligned_cols=240 Identities=29% Similarity=0.406 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||+.|++.|+++|||||||++++..+.++++++++.++.|+|++++++.+ +...+..+..+++.
T Consensus 43 ~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~~~~~~~~~r~t~~~~~~~v~~~~~~~~~~~~~~~--------- 113 (291)
T d2ap9a1 43 RRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNL--------- 113 (291)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCSSSSCCBCHHHHHHHHHHHHHTHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCccccchhHHHcCCCcccccccccCcHHHHHHHHHhhhhHHHHHHHHH---------
Confidence 56899999999999999999999999999999999999999999999999999998 78888888888884
Q ss_pred hhhcCCCCCccccceeeccccEEEEEEcCc---cCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecC
Q 010815 86 IRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCN 162 (500)
Q Consensus 86 l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~---~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~ 162 (500)
+..+|+. ++++++.+.++..+.+... .++.|++++|.++.++.+.|+.+|++|.|||++|++++++|+.+|+|
T Consensus 114 ~~~~g~~----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~G~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~n~d 189 (291)
T d2ap9a1 114 INAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNIN 189 (291)
T ss_dssp HTTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEEC
T ss_pred HHhcCCc----cccchhhhcccccccccccccccccccceeecccccchHHHHHHHHhcCCCcccCccccCCcccccccc
Confidence 5667776 8889999999888776542 35678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCcccCC----CCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCC
Q 010815 163 TYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 238 (500)
Q Consensus 163 ~D~~a~~lA~~l~Ad~li~lTdv~gv~~----~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
+|.+|+++|.+|+||+||||||+||+.. .++++++++..++++++...
T Consensus 190 ~D~lAa~lA~~l~AdkLI~LTdv~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 241 (291)
T d2ap9a1 190 ADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTL---------------------------- 241 (291)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEEHHHHHHHGGGS----------------------------
T ss_pred HHHHHHHHHHhcCCcEEEEeeccCcccccccccccccccCCHHHHHHHHhhh----------------------------
Confidence 9999999999999999999999999843 35678888888888875321
Q ss_pred ccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 010815 239 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 318 (500)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 318 (500)
+| | |.+||++|..||++||+||||+||+.|+
T Consensus 242 ---------------------------~g-G---------------------M~~Kl~aA~~a~~~Gv~rv~Ii~g~~~~ 272 (291)
T d2ap9a1 242 ---------------------------EL-G---------------------MVPKVEACLRAVIGGVPSAHIIDGRVTH 272 (291)
T ss_dssp ---------------------------CT-T---------------------THHHHHHHHHHHHHTCSEEEEEETTSTT
T ss_pred ---------------------------hC-c---------------------hHHHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 22 4 9999999999999999999999999999
Q ss_pred eeeehhhhcCCCcceeec
Q 010815 319 VLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 319 ~ll~~l~~~~~~GT~i~~ 336 (500)
+|+.|+|++++.||+|.+
T Consensus 273 ~ll~eLft~~g~GT~I~r 290 (291)
T d2ap9a1 273 CVLVELFTDAGTGTKVVR 290 (291)
T ss_dssp HHHHHHHSCCCCSEEEEC
T ss_pred HHHHHHhcCCCCceEEec
Confidence 999999999999999975
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.98 E-value=2.5e-32 Score=273.87 Aligned_cols=242 Identities=15% Similarity=0.080 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCchh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICN 85 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~~ 85 (500)
+.++++||+.|+..|+++|||||||||++.++.+++++++++++.|+|+...+..+ +...+.++..+...
T Consensus 29 l~~~~~~Ia~L~~~G~~vVlVhGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------- 99 (313)
T d1e19a_ 29 VRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNE--------- 99 (313)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCCccccCCCcccccHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 56789999999999999999999999999999999999999999999999999888 67777788877774
Q ss_pred hhhcCCCCCcc---------ccceeeccccEEEEEEcC--------------------ccCCcccceeeeEeeeCHHHHH
Q 010815 86 IRRHGDSSRWH---------EVGVSVASGNFLAAKRKG--------------------VVDGVDYGATGEVKKVDVTRMR 136 (500)
Q Consensus 86 l~~~Gi~~~~~---------a~~l~~~d~~~~~~~~~~--------------------~~~~~d~g~~G~v~~vd~~~I~ 136 (500)
+..+++++... +.+++..+.....+.... .......+.++.++.++.+.|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~~~i~ 179 (313)
T d1e19a_ 100 LRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIK 179 (313)
T ss_dssp HHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSCEEEEECCCCEEEETTHHHHH
T ss_pred HHhccccHHhhHHHHhhhhhhHHHHhhccCceeehhhhhhHHHHHHhhcCceeeeccCccceeeccCCCceeEeccccee
Confidence 34444442111 344444555555544321 1111123456668889999999
Q ss_pred HHHhCCCcEEEcCcccCC--------CCCeeecCHHHHHHHHHHHcCCCEEEEEecCccc-----CCCCccccccCHHHH
Q 010815 137 ERLDGGCLVILSNLGYSS--------SGEVLNCNTYEVATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEA 203 (500)
Q Consensus 137 ~lL~~g~IPVi~~~~~~~--------~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv-----~~~g~~I~~i~~~e~ 203 (500)
.+++++++|++++.+..+ +|+.+|+|+|++|+.+|.+|+||+|||||||||+ ++++++|++++.+|+
T Consensus 180 ~~~~~~~i~vl~~~~~~~v~~~~~~~~G~~~ninaD~lAa~vA~~l~Ad~LIlLTdv~Gv~~~~~~~~~~~i~~l~~~e~ 259 (313)
T d1e19a_ 180 KLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEEL 259 (313)
T ss_dssp HHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTTSTTCEECCEEEHHHH
T ss_pred eccccchhhhhccCCCCCccccCCCcCceEEecchhHHHHHHHHHHHHHHHHhccCCcceeccCCCcccceeeeCCHHHH
Confidence 999999999998776543 5889999999999999999999999999999998 356899999999999
Q ss_pred HHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccc
Q 010815 204 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 283 (500)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 283 (500)
++++..+. |.+||
T Consensus 260 ~~li~~g~-----------------------------------------------------------------~~~GG-- 272 (313)
T d1e19a_ 260 RKYYEEGH-----------------------------------------------------------------FKAGS-- 272 (313)
T ss_dssp HHHHHTTC-----------------------------------------------------------------SCTTT--
T ss_pred HHHhhCCC-----------------------------------------------------------------cccCC--
Confidence 99985432 22334
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceeec
Q 010815 284 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~~ 336 (500)
|.+||+||..|+++|+++++|.+ ++. +.+++.++ .||+|.|
T Consensus 273 -------M~~Kv~aA~~a~~~Gv~~v~I~~---~~~-i~~~l~g~-~GT~i~P 313 (313)
T d1e19a_ 273 -------MGPKVLAAIRFIEWGGERAIIAH---LEK-AVEALEGK-TGTQVLP 313 (313)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEEE---GGG-HHHHHTTS-SSEEEEC
T ss_pred -------hHHHHHHHHHHHHhCCCEEEECC---hHH-HHHHHCCC-CCCEEcC
Confidence 99999999999999999999965 343 45666664 6999976
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Probab=99.97 E-value=1.9e-30 Score=259.15 Aligned_cols=242 Identities=13% Similarity=0.090 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|+..|+++|||||||||++..+.+++..+.+..+.|.++...+.........+...+....
T Consensus 27 l~~~~~~Ia~L~~~G~~vViVHGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 97 (307)
T d1b7ba_ 27 LVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQEL--------- 97 (307)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcCCCCcccccccccchHHHHHHHHHHHHHhhhhHHHH---------
Confidence 56899999999999999999999999998888888777777766666666666665444444443333321
Q ss_pred hhcCCCC--------------------CccccceeeccccEEEEE--------EcCccCCcccceeeeEeeeCHHHHHHH
Q 010815 87 RRHGDSS--------------------RWHEVGVSVASGNFLAAK--------RKGVVDGVDYGATGEVKKVDVTRMRER 138 (500)
Q Consensus 87 ~~~Gi~~--------------------~~~a~~l~~~d~~~~~~~--------~~~~~~~~d~g~~G~v~~vd~~~I~~l 138 (500)
....++. +..++++.+.++...... ..+.....+.++.+.+..++.+.+..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 177 (307)
T d1b7ba_ 98 NKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTL 177 (307)
T ss_dssp HHTTCCCEEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHTTTCCEEEETTTEEEEEECCCCEEEETTHHHHHHH
T ss_pred hhcccchhhhhhhhhhhHHHHHHHHHccCcceeeecccchHHHHHHhhcceeccccccceeecCcCceeeeechhhhhhh
Confidence 1111111 112333333322111111 111111123455667788999999999
Q ss_pred HhCCCcEEEcCc------ccCCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-----CCCccccccCHHHHHHHH
Q 010815 139 LDGGCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSLI 207 (500)
Q Consensus 139 L~~g~IPVi~~~------~~~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-----~~g~~I~~i~~~e~~~~~ 207 (500)
++++.+|+++|+ +.+.+|+.+|+|+|++|+++|.+|+||+|||||||||++ +++++++.++.+|+++++
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~~~g~~~ninaD~lAa~iA~~l~Ad~Li~lTdv~Gv~~~~~~~~~~~i~~l~~~e~~~l~ 257 (307)
T d1b7ba_ 178 IKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYK 257 (307)
T ss_dssp HHTTEEEECSGGGCEEEETTTTEECSCCCCHHHHHHHHHHHHTCSEEEEECSSSSCEETTTSTTCEECSEEEHHHHHHHH
T ss_pred hhcCceeeccCCccccccccCCCCcEEecchhHHHHHHHHHhhhhheeeccccCceeeCCCcccccccccCCHHHHHHHH
Confidence 999999998764 455578999999999999999999999999999999983 357789999999999997
Q ss_pred HhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhh
Q 010815 208 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 287 (500)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 287 (500)
.++. |.+||
T Consensus 258 ~~g~-----------------------------------------------------------------~~~GG------ 266 (307)
T d1b7ba_ 258 QAGH-----------------------------------------------------------------FAPGS------ 266 (307)
T ss_dssp HTTC-----------------------------------------------------------------SCTTT------
T ss_pred HCCC-----------------------------------------------------------------cccCC------
Confidence 6532 22334
Q ss_pred cccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCccee
Q 010815 288 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 334 (500)
Q Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i 334 (500)
|.+||+||..|+++||+++||+++. + .+.++|++++.||+|
T Consensus 267 ---M~pKl~aA~~al~~Gv~~~~ii~~~--~-~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 267 ---MLPKIEAAIQFVESQPNKQAIITSL--E-NLGSMSGDEIVGTVV 307 (307)
T ss_dssp ---HHHHHHHHHHHHTTSTTCEEEEECH--H-HHTTCSSCSCEEECC
T ss_pred ---hHHHHHHHHHHHHcCCCeEEEECCH--H-HHHHHHcCCCCCCCC
Confidence 9999999999999999999999763 3 468999999999986
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=2.2e-28 Score=236.05 Aligned_cols=236 Identities=22% Similarity=0.274 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHcCCe-EEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~-~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.|++.|++ +|||||+|+|++.+++++++++++..+.|+++..++..+ +...+.++..++.
T Consensus 20 ~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 90 (258)
T d1gs5a_ 20 LERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLA--------- 90 (258)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHHTHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCceEEEECCCchhhhcchhhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHH---------
Confidence 67899999999999987 899999999999999999999999999999999999998 6778888888887
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
.+...|.+ +...+..+.++..... ...++.+++.+..++...+..+++.+.+|++.|++.+.+++.+++++|
T Consensus 91 ~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~i~v~~~~~~~~~~~~~~~~~~ 162 (258)
T d1gs5a_ 91 WAKKHQIA----AVGLFLGDGDSVKVTQ----LDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162 (258)
T ss_dssp HHHHTTCC----EEEECTTGGGCEEEEE----CCGGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHH
T ss_pred HHhccCcc----cccccccccccccccc----ccccccccccccccccchHHHHHhccccccccccccccCCcEEEechh
Confidence 45677766 6666666666666544 235788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcc-cCCCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccc
Q 010815 165 EVATACALAIEADKLICIIDGPI-LDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 243 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~g-v~~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
.+++.+|..++|+++ ++||+++ ++.++..++.++..+...+...+
T Consensus 163 ~~a~~~a~~l~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 208 (258)
T d1gs5a_ 163 QAATALAATLGADLI-LLSDVSGILDGKGQRIAEMTAAKAEQLIEQG--------------------------------- 208 (258)
T ss_dssp HHHHHHHHHHTCEEE-EEESSSSCBCTTSCBCCEECHHHHHHHHHTT---------------------------------
T ss_pred hhhhhHHHHHHhhhh-hhcccccccccccccccccchHHHHHHHhCC---------------------------------
Confidence 999999999999976 4566665 56677888888888877664332
Q ss_pred cCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeh
Q 010815 244 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 323 (500)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~ 323 (500)
+.+|| |.+||+||..|+++|+++|||+||+.|+ +|.+
T Consensus 209 ---------------------------------~~tGG---------M~~Kl~aA~~a~~~Gv~~v~I~~g~~~~-~L~~ 245 (258)
T d1gs5a_ 209 ---------------------------------IITDG---------MIVKVNAALDAARTLGRPVDIASWRHAE-QLPA 245 (258)
T ss_dssp ---------------------------------CSCTH---------HHHHHHHHHHHHHHHTSCEEEEESSCGG-GHHH
T ss_pred ---------------------------------cccch---------HHHHHHHHHHHHHcCCCEEEEEeCCCch-HHHH
Confidence 12333 9999999999999999999999999887 5789
Q ss_pred hhhcCCCcceeec
Q 010815 324 LFKRDGMGTMVAS 336 (500)
Q Consensus 324 l~~~~~~GT~i~~ 336 (500)
+|++++.||+|.+
T Consensus 246 l~~g~~~GT~i~a 258 (258)
T d1gs5a_ 246 LFNGMPMGTRILA 258 (258)
T ss_dssp HHTTCCSSEEECC
T ss_pred HhcCCCCceEEeC
Confidence 9999999999853
|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.84 E-value=2.1e-20 Score=177.69 Aligned_cols=197 Identities=13% Similarity=0.096 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.+.+ +.++|||||+|.+.+.+......-. .+....+........+|..+... .|
T Consensus 22 i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--------~l 84 (225)
T d2brxa1 22 IKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFN--------SSETFKDFIGIQITRANAMLLIA--------AL 84 (225)
T ss_dssp HHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTT--------CCHHHHHHHHHHHHHHHHHHHHH--------HH
T ss_pred HHHHHHHHHHHHc-CCcEEEEECccHHHHHHHHhhhhcc--------hhhHHHHHhhhhHHHHHHHHHHH--------HH
Confidence 5678888988866 7899999999999876544221110 12223333444555666655543 45
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
...|++ . . .-+......+++.+.|||++.... +.++|++
T Consensus 85 ~~~~~~----~---~---------------------------~~~~~~~~~~l~~~~ipv~~~~~~-------~~~~D~l 123 (225)
T d2brxa1 85 REKAYP----V---V---------------------------VEDFWEAWKAVQLKKIPVMGGTHP-------GHTTDAV 123 (225)
T ss_dssp GGGBCS----S---C---------------------------BCSHHHHHHHHHTTCBCEECCCST-------TCCHHHH
T ss_pred Hhhhcc----c---c---------------------------cccHHHHHHHHHhcccccccCCCC-------CcchhHH
Confidence 666654 1 1 013445567899999999976532 3578999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 167 ATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
|+.+|..|+||+|+|+|||||++ |++++|++++.+|+.++...+..
T Consensus 124 Aa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e~~~~~~~~~~--------------------------- 176 (225)
T d2brxa1 124 AALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIE--------------------------- 176 (225)
T ss_dssp HHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC------------------------------
T ss_pred HHHHHHHhCchhhhhhhhhhhhhhcccccccccccceEEecchHHHHhccCcc---------------------------
Confidence 99999999999999999999983 46899999999998888654320
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
...+| | |.+|+ ||..|.++|++ ++|+||+.|++
T Consensus 177 -----------------------~~g~g-g---------------------~~~k~-Aa~~a~~~gi~-v~I~ng~~~~~ 209 (225)
T d2brxa1 177 -----------------------KAGSS-S---------------------VIDPL-AAKIIARSGIK-TIVIGKEDAKD 209 (225)
T ss_dssp -----------------------------C---------------------CSCHH-HHHHHHHHTCC-EEEECHHHHTC
T ss_pred -----------------------ccCCC-C---------------------cccHH-HHHHHHHCCCc-EEEEeCCCcch
Confidence 01122 3 88898 77888899998 89999999997
Q ss_pred eeehhhhcCCCcceeec
Q 010815 320 LLLELFKRDGMGTMVAS 336 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~~ 336 (500)
| .+++.++..||+|.|
T Consensus 210 l-~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 210 L-FRVIKGDHNGTTIEP 225 (225)
T ss_dssp H-HHHHTTCSSSEEECC
T ss_pred H-HHHHCCCCCCcEecC
Confidence 5 578888889999976
|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Glutamate 5-kinase species: Campylobacter jejuni [TaxId: 197]
Probab=99.82 E-value=1.4e-20 Score=181.74 Aligned_cols=216 Identities=14% Similarity=0.105 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECCh-HHHHHHHHHcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTH-VQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG-~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.+++ ++++||||||| ++++ ..+++..+. ......+ ...+..+...+..
T Consensus 23 l~~~~~~I~~l~~-~~~~vIV~gGa~~~G~---~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~--------- 81 (250)
T d2akoa1 23 LKNLVAFLAKLME-KYEVILVTSAAISAGH---TKLDIDRKN--------LINKQVLAAIGQPFLISVYNE--------- 81 (250)
T ss_dssp HHHHHHHHHHHHH-HSEEEEEECCHHHHHH---HHCCCCSSS--------HHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHc-CCeEEEEEcCcccccc---cccccccch--------hhhhhhhhcccchhHHHHHHH---------
Confidence 4689999999986 78999887775 5555 455655321 1112222 2222222233333
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
.|..+|+. +.........+ ..........+.+..+++.+++||++++.....+...+.++|
T Consensus 82 ~l~~~~~~----~~~~l~~~~~~---------------~~~~~~~~~~~~~~~~l~~~~ipv~~~~~~~~~~~~~~~~~D 142 (250)
T d2akoa1 82 LLAKFNKL----GGQILLTGKDF---------------DSRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDND 142 (250)
T ss_dssp HHGGGTCC----EEEEEECTGGG---------------GCHHHHHHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTH
T ss_pred Hhhhcccc----cccccccccch---------------hhhhhhhhhhHHHHHHHHhCcccccccCccccccccccccch
Confidence 45666665 22221111111 011222345688999999999999998877767778899999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCH--HHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 235 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
.+|+.+|..++|++|+++|||||++ +++++|++|+. ++.+++...
T Consensus 143 ~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~It~~~~~~~~~~~~-------------------------- 196 (250)
T d2akoa1 143 SLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIK-------------------------- 196 (250)
T ss_dssp HHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC-------------------------------
T ss_pred hhHHHHHHhcccceeeeccCCCceeeCCCcccccccchhhccccchHHhhhhcc--------------------------
Confidence 9999999999999999999999983 45789999874 222222110
Q ss_pred CCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 010815 236 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 315 (500)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (500)
.++.+ .+|| |.+||+||..+.++|++ ++|+||+
T Consensus 197 ------------------------~~s~~-------------~tGG---------M~~Kl~aa~~~~~~gi~-v~I~nG~ 229 (250)
T d2akoa1 197 ------------------------TGSEH-------------GTGG---------IVTKLKAAKFLLEHNKK-MFLASGF 229 (250)
T ss_dssp ----------------------------C-------------BSCH---------HHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred ------------------------cCCCC-------------CCCc---------hHHHHHHHHHHHHCCCC-EEEecCC
Confidence 01112 2344 99999999999999995 9999999
Q ss_pred cCceeeehhhhc-CCCcceee
Q 010815 316 IGGVLLLELFKR-DGMGTMVA 335 (500)
Q Consensus 316 ~~~~ll~~l~~~-~~~GT~i~ 335 (500)
.|+++...+.++ +..||.|.
T Consensus 230 ~~~~l~~~l~~~~~~~GTv~~ 250 (250)
T d2akoa1 230 DLSVAKTFLLEDKQIGGTLFE 250 (250)
T ss_dssp SCHHHHHHHHSCCCCSSEEEC
T ss_pred CccHHHHHHhCCCCCCceEeC
Confidence 999887767655 45799883
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.74 E-value=1.6e-17 Score=156.84 Aligned_cols=191 Identities=17% Similarity=0.125 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHH---HcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCc
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPI 83 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~---~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~ 83 (500)
+.+++++|+.+++.+ ++|||||||.+.+.... ..+. +....+........+|..+.+.
T Consensus 19 i~~la~~i~~l~~~~-~~vIVvsgG~~ar~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------- 79 (219)
T d2ij9a1 19 IREFAKTIESVAQQN-QVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIAATRLNAMLLIS------- 79 (219)
T ss_dssp HHHHHHHHHHHHHHS-EEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHcCC-cEEEEECCCccccchhhhhhhcCc-----------cHHHHHHHHHHHHHhhHHHHHH-------
Confidence 568999999998765 89999999998765433 2222 2233333333444445444332
Q ss_pred hhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCH
Q 010815 84 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 163 (500)
Q Consensus 84 ~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~ 163 (500)
.|...+.. ...+....+.+++.+.+||+... .-+.++
T Consensus 80 -~l~~~~~~-----------------------------------~~~~~~~~~~l~~~~~v~v~~~~-------~~~~st 116 (219)
T d2ij9a1 80 -AIPSAAKK-----------------------------------VPVDFMEAEELSKLYRVVVMGGT-------FPGHTT 116 (219)
T ss_dssp -HCTTBCSS-----------------------------------CCSSHHHHHHHHTTCSEEEECCC-------SSSSCT
T ss_pred -Hhhhccch-----------------------------------hhHHHHHHHHHhccCCceEECCC-------CCCCcc
Confidence 23333322 12356677889999999987532 234678
Q ss_pred HHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCC
Q 010815 164 YEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 236 (500)
Q Consensus 164 D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (500)
|.+|+.+|..++||.|+++|||||++ |++++|++|+.+|+.++...+.
T Consensus 117 D~laa~vA~~l~Ad~liilTDVDGvYt~dP~~~~~A~~i~~is~~e~~~~~~~~~------------------------- 171 (219)
T d2ij9a1 117 DATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSS------------------------- 171 (219)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC---------------------------
T ss_pred cHHHHHHHHHcCchHhhhccCcccccccccccCcccccccccCHHHHHHHhhccC-------------------------
Confidence 99999999999999999999999983 4689999999988777642211
Q ss_pred CCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 010815 237 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 316 (500)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (500)
....| | |..|+.||..|.++|++ ++|++|+
T Consensus 172 --------------------------~~~~g-g---------------------~~~k~~Aa~~a~~~gi~-~~I~~g~- 201 (219)
T d2ij9a1 172 --------------------------AKAGT-N---------------------VVIDLLAAKIIERSKIK-TYVILGT- 201 (219)
T ss_dssp -----------------------------CC-C---------------------CCSCHHHHHHHHHHTCC-EEEEECC-
T ss_pred --------------------------ccCCC-C---------------------CcchHHHHHHHHHcCCc-EEEecCC-
Confidence 00112 3 88999999999999998 8899996
Q ss_pred CceeeehhhhcCCCcceee
Q 010815 317 GGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 317 ~~~ll~~l~~~~~~GT~i~ 335 (500)
|+++ ..++.++..||.|.
T Consensus 202 ~~ni-~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 202 PENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHH-HHHHTTCCCSEEEC
T ss_pred CcHH-HHHHCCCCCceEeC
Confidence 6665 46677778899873
|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase RPA1999 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=99.74 E-value=1.2e-17 Score=149.05 Aligned_cols=137 Identities=20% Similarity=0.217 Sum_probs=104.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHH-------------HHhhc--CcEEEEEECCeEEEEEEEeeecCCCe
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------------LLKAL--DSFYVVEREGQIIACAALFPFFKEKC 404 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~-------------~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~ 404 (500)
..||+++++|.+.+.+|+.+..........+.++ +...+ ..++|++.+++++|++.+.+ .
T Consensus 4 ~~IR~a~~~D~~~l~~l~~~a~~~~~~~~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~-----~ 78 (156)
T d2fiwa1 4 PALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG-----P 78 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEET-----T
T ss_pred cEEeeCCHHHHHHHHHHHHHHHHhhhhhcCCHHHHHhhccCCCCHHHHHHhccCceEEEEEECCEEEEEEeecc-----c
Confidence 5799999999999999988765443322223332 22222 35789999999999998863 2
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEE
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 483 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~ 483 (500)
.+|..++|+|+|||+|+|+.|+++++++|++.|+..+.+.+ ..|.+||+|+||+.++....+.. ...-..+.|
T Consensus 79 ~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~~~~~~~~~~------g~~l~~~~M 152 (156)
T d2fiwa1 79 DHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSIN------GEWLANTTM 152 (156)
T ss_dssp TEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEEET------TEEEEEEEE
T ss_pred hhHHHHhccHHHcCCCHHHHHHHHHHHHHHhcCCCEEEEEeccchhHHHHhCCCEEEEEEEEeEC------CEEEEEEEE
Confidence 47889999999999999999999999999999999999987 57899999999999876544421 112244778
Q ss_pred EecC
Q 010815 484 KKLL 487 (500)
Q Consensus 484 kkll 487 (500)
+|.|
T Consensus 153 ~K~L 156 (156)
T d2fiwa1 153 TKSL 156 (156)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7754
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.69 E-value=3.9e-16 Score=138.41 Aligned_cols=127 Identities=20% Similarity=0.274 Sum_probs=105.3
Q ss_pred cccccCCcccHHHHHHHHHHHHH----cCc---C-ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVE----SGA---L-VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAA 409 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~----~~~---~-~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~ 409 (500)
++||+++++|++.|.+++.+... ... . .....+.+...+ ..+|+++++++++|++.+....+....++..
T Consensus 1 m~iR~a~~~Dl~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~ 80 (157)
T d2fiaa1 1 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKR 80 (157)
T ss_dssp CCEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHhcCcchhhccchhHHHHHHhhccCceEEEEECCEEEEEEEEeecCccceeeecc
Confidence 46999999999999999876432 111 1 112355565543 5688999999999999998777777899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
++|+|+|||+|+|+.|+++++++|++.|++.+.+.| .+|++||+|+||+.++....+
T Consensus 81 ~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v~e~~~~ 141 (157)
T d2fiaa1 81 FATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM 141 (157)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCT
T ss_pred cEECHHHcCCCCcchhhHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEeeeECCc
Confidence 999999999999999999999999999999999998 579999999999999876544
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=3.6e-16 Score=141.33 Aligned_cols=127 Identities=16% Similarity=0.173 Sum_probs=102.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHH-------------HHhhc----CcEEEEEECCeEEEEEEEeeec--
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------------LLKAL----DSFYVVEREGQIIACAALFPFF-- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~-------------~~~~l----~~~~v~~~dg~IVG~~~l~~~~-- 400 (500)
++||+++++|++.|.++..+.+...+....+.++ +...+ ..+++++.++++||++.+....
T Consensus 2 i~ir~at~~D~~~l~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~ 81 (173)
T d1tiqa_ 2 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 81 (173)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHhcCCHHHHHHHHhCCCcEEEEEEECCEecceEEEEecCcc
Confidence 5799999999999999987776655543333333 22222 2478889999999999886422
Q ss_pred ----CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 401 ----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 401 ----~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
.....+|..++|+|+|||+|+|+.|+++++++|++.|++.+.+.+ ..+++||+|+||+..+....+
T Consensus 82 ~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~k~GF~~~g~~~~~ 155 (173)
T d1tiqa_ 82 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFY 155 (173)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccccCCCeEEEEEEEECHHHcCCCCCcchhHhhhhhhhhhhcchhhccccccCHHHHHHHHHCCCEEeeEEEee
Confidence 235788999999999999999999999999999999999999988 579999999999999865433
|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Phosphinothricin acetyltransferase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.68 E-value=7.6e-16 Score=137.24 Aligned_cols=124 Identities=23% Similarity=0.225 Sum_probs=100.9
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc----CccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC---CCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~----~~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~---~~~~ 405 (500)
++||+++++|++.|.+++++...... ..+.+.+....++ ..++|++.++++||++.+.+... ....
T Consensus 2 i~IR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 81 (163)
T d1yr0a1 2 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 81 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEECCeEEEeecceeecccccccce
Confidence 57999999999999999987644322 2344555555443 34788899999999998876432 2446
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.+..++|+|+|||+|+|+.|+.+++++|++.|++++.+.+ ..+++||+|+||+.++..
T Consensus 82 ~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~GF~~~G~~ 143 (163)
T d1yr0a1 82 REHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRF 143 (163)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeeeecccCCCCceeeeecccccccccccceEEEEEecCCHHHHHHHHHCCCEEEEEE
Confidence 6779999999999999999999999999999999999987 579999999999998754
|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase PA0478 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=5.2e-16 Score=137.96 Aligned_cols=123 Identities=23% Similarity=0.238 Sum_probs=98.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHc---CcCccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec----CCCeEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEKCGE 406 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~---~~~~~~s~~~~~~~l------~~~~v~~~dg~IVG~~~l~~~~----~~~~~~ 406 (500)
+.||+++++|++.|.+|+.+.... ......+.+.+.+.+ ..+++++.+++++|++.+.... ....++
T Consensus 1 i~IR~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 80 (156)
T d2fe7a1 1 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 80 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeCCEEEEEEeEeecccccccCCeEE
Confidence 469999999999999998875432 122345666666553 2468889999999998876532 235678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
+..++|+|+|||+|+|+.|+++++++++++|++.+.+.+ .+|++||+|+||++.+.
T Consensus 81 i~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~ 140 (156)
T d2fe7a1 81 LEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDE 140 (156)
T ss_dssp EEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTT
T ss_pred eeeeeechhhhccChHHHHHHHHHHHHHHccCCcceEEEcCCCHHHHHHHHHCCCEEcCc
Confidence 999999999999999999999999999999999999988 57999999999998653
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=6.4e-16 Score=137.43 Aligned_cols=146 Identities=18% Similarity=0.207 Sum_probs=111.6
Q ss_pred cccccccCCcccHHHHHHHHHHHHHc-----CcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVES-----GALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 409 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~-----~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~ 409 (500)
|.+++|+++++|++.+.++....... ....+.+.+.+.+.+ ..+++++.+|++||++.+........++|..
T Consensus 1 M~lt~R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~~~~~~~i~~ 80 (160)
T d2i6ca1 1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 80 (160)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred CceEEecCCHHHHHHHHHHHhCHHHHhhhcccccCCCCHHHHHHHHhccCCeEEEEECCEEEEEeeeeccccCCEEEEEE
Confidence 45789999999999999987543221 222345666655544 3578888999999999998777778899999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEE
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 484 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~k 484 (500)
++|+|+|||||+|+.|++.++++|++. +.+.+.+.+ ..+++||+|+||++++...... .+..+...+.|+
T Consensus 81 ~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~-----~~g~~~~~~~m~ 155 (160)
T d2i6ca1 81 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHD-----PDGRRVALIQMD 155 (160)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEC-----TTSCEEEEEEEE
T ss_pred eEeCHhHcCCcchhhhhHHHHHHHHHhccccceeeecccccchhhhHHHhCCCEEEEEEEeec-----CCCCEEEEEEEe
Confidence 999999999999999999999999875 678787776 5789999999999987543211 122344556677
Q ss_pred ecCC
Q 010815 485 KLLP 488 (500)
Q Consensus 485 kll~ 488 (500)
|.|.
T Consensus 156 k~l~ 159 (160)
T d2i6ca1 156 KPLE 159 (160)
T ss_dssp EECC
T ss_pred eeCC
Confidence 7664
|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YqiY species: Bacillus subtilis [TaxId: 1423]
Probab=99.65 E-value=3.3e-16 Score=139.31 Aligned_cols=146 Identities=12% Similarity=0.112 Sum_probs=109.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHH-HHhhcCcEEEEEECCeEEEEEEEeee-cCCCeEEEEEEEEccCCc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-LLKALDSFYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~-~~~~l~~~~v~~~dg~IVG~~~l~~~-~~~~~~~I~~l~V~p~yR 417 (500)
++||+++.+|++.|.+++.+.+............ +.......++++.+++++|++..... ......++..++|+|+||
T Consensus 2 m~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 81 (157)
T d1mk4a_ 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhcCCchhhHHHHhhhhccCceEEEEEECCEEEEEeeeeeeccCCccceeeEEEEEHHHc
Confidence 4699999999999999987654433222222222 23333457889999999998766543 345678999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchh--hhhhhcccCCceEEEEe
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE--RRKRINLSRNSKYYMKK 485 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~--~~~~~~~~~~s~~~~kk 485 (500)
|+|+|+.|+.++++++++.|+.++.+.+ +.+++||+|+||+.......+.. ....|+....++++|.|
T Consensus 82 g~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~y~g~~~d~~~~~k 155 (157)
T d1mk4a_ 82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVK 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEE
T ss_pred CCcccchHHHHHHHhhccccceEEEEEeccchHHHHHHHHHCCCEEeeeEeccCCceeEccCCCCCCEEEEEEE
Confidence 9999999999999999999999999988 46899999999998765443332 23445555556666555
|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative phosphinothricin acetyltransferase YwnH species: Bacillus subtilis [TaxId: 1423]
Probab=99.64 E-value=8.5e-16 Score=137.45 Aligned_cols=145 Identities=23% Similarity=0.367 Sum_probs=105.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc------CcEEEE-EECCeEEEEEEEeeecC----CCe
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL------DSFYVV-EREGQIIACAALFPFFK----EKC 404 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l------~~~~v~-~~dg~IVG~~~l~~~~~----~~~ 404 (500)
++||+++++|++.|.+++++....... .+.+.+....++ ..++++ ..+++++|++.+.+... ...
T Consensus 2 ~~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (165)
T d1vhsa_ 2 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 81 (165)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEecCCceEeeeeeeeccccccccce
Confidence 579999999999999999876554332 223333333322 235555 45689999999876432 234
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCce
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 480 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~ 480 (500)
+++ .++|+|+|||+|+|+.|+++++++|++.|++++.+.+ +++++||+|+||+.++... .. ...+....+-
T Consensus 82 ~~~-~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~~--~~--~~~~g~~~D~ 156 (165)
T d1vhsa_ 82 AEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFP--GI--AEMDGKRYDL 156 (165)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE--EE--EEETTEEEEE
T ss_pred EEE-eeecCchhhcccccchhhhhhhhhhccccceeEEEEEecCCHHHHHHHHHCCCEEEEEEc--Ce--EEECCEEEEE
Confidence 454 7999999999999999999999999999999999988 5799999999999987531 10 0111223455
Q ss_pred EEEEecCCC
Q 010815 481 YYMKKLLPD 489 (500)
Q Consensus 481 ~~~kkll~~ 489 (500)
++|.|.|++
T Consensus 157 ~~m~k~l~~ 165 (165)
T d1vhsa_ 157 KILGRELSE 165 (165)
T ss_dssp EEEEEECCC
T ss_pred EEEEeECCC
Confidence 788888764
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Probab=99.64 E-value=3.1e-15 Score=136.50 Aligned_cols=143 Identities=14% Similarity=0.234 Sum_probs=103.2
Q ss_pred ccccCCcccH---HHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEcc
Q 010815 341 GTRTAKVTDL---SGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 414 (500)
Q Consensus 341 ~iR~a~~~D~---~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p 414 (500)
.|+.++.++. +.+.++.+..+...+. ....+.+.+.. ..++++..+++++|++.+....+...++|..++|+|
T Consensus 2 iI~e~~~~~p~~~~~l~~l~~~~~p~~~~-~~~~~~~~~~~~~~~~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~V~p 80 (180)
T d1n71a_ 2 IISEFDRNNPVLKDQLSDLLRLTWPEEYG-DSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVES 80 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHCTTTSS-STHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECT
T ss_pred eEEEccccChHHHHHHHHHHHHhCCcccC-cchHHHHHHHhCCCCEEEEEEECCeEEEEEEEEEecCCCEEEEEEEEEch
Confidence 4666666663 6677776555443332 11233333333 357888999999999998877677889999999999
Q ss_pred CCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----------------------------HHHHHHHHhCCCeEeceecc
Q 010815 415 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----------------------------TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 415 ~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-----------------------------~~a~~fYek~GF~~~~~~~l 465 (500)
+|||||+|+.|+++++++|+++|+..+.|.| ..+.+||+|+||+.++..
T Consensus 81 ~~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~fY~k~Gf~~~g~~-- 158 (180)
T d1n71a_ 81 SRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVL-- 158 (180)
T ss_dssp TSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEE--
T ss_pred HHhccHHHHHHHHHHHHHHHHCCCCEEEEEecCcccccchhhhhcccccccccchhccccHHHHHHHHHCCCEEEeee--
Confidence 9999999999999999999999999999976 137999999999998754
Q ss_pred chhhhhhhcccCCceEEEEecCCCC
Q 010815 466 PEERRKRINLSRNSKYYMKKLLPDT 490 (500)
Q Consensus 466 p~~~~~~~~~~~~s~~~~kkll~~~ 490 (500)
|+ .+....+.-++.|++.|.+
T Consensus 159 ~~----~~g~~~~~~~m~k~l~~~~ 179 (180)
T d1n71a_ 159 PN----ANGWDKPDIWMAKTIIPRP 179 (180)
T ss_dssp TT----TTSTTCCEEEEEEECSCCC
T ss_pred cC----CCCCCCCcEEEEEecCCCC
Confidence 32 1222333344445555554
|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA4866 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=2.3e-15 Score=135.09 Aligned_cols=146 Identities=18% Similarity=0.175 Sum_probs=107.3
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEE-EECCeEEEEEEEeeecCC---CeE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFKE---KCG 405 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~-~~dg~IVG~~~l~~~~~~---~~~ 405 (500)
+||+++++|++.|.+++++....... .+.+.+++..++ ..++++ +.+++++|++.+.+.... ...
T Consensus 1 tiR~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (169)
T d1yvoa1 1 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGT 80 (169)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTTE
T ss_pred CcccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEecCCCEEEeeccccccccccccce
Confidence 58999999999999999876543332 344566655544 235554 467899999998765432 345
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceE
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~ 481 (500)
.+..++|+|+|||+|+|+.|++.+++++++.|++++.+.+ ..+++||+|+||+..+... +... .+....+.+
T Consensus 81 ~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~GF~~~g~~~--~~~~--~~g~~~D~~ 156 (169)
T d1yvoa1 81 VEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMP--QVGQ--KFGRWLDLT 156 (169)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEE--EEEE--ETTEEEEEE
T ss_pred EEEEeecChhhhcCCeeeeeeeeeccccccccceEEEEEeccCcHHHHHHHhcCCcEEEEEEe--eEEE--ECCEEEEEE
Confidence 5568999999999999999999999999999999999988 5789999999999987541 1100 011223457
Q ss_pred EEEecCCCC
Q 010815 482 YMKKLLPDT 490 (500)
Q Consensus 482 ~~kkll~~~ 490 (500)
+|.+.|+..
T Consensus 157 ~~~~~l~~~ 165 (169)
T d1yvoa1 157 FMQLNLDPT 165 (169)
T ss_dssp EEEEESCTT
T ss_pred EEEEECCCC
Confidence 788777544
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Probab=99.63 E-value=1.9e-15 Score=135.71 Aligned_cols=144 Identities=14% Similarity=0.253 Sum_probs=106.9
Q ss_pred ccccCCcccHHHHHHHHH---HHHHcCcCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 412 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~---~~~~~~~~~~~s~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V 412 (500)
.+|.++.+|.++...++. +.+...++ ....+.+.+.+ ..+++++.++++|||+++....+...++|..++|
T Consensus 2 ~~r~i~~~d~~e~~~lL~~l~~if~~~lp-~~~~~y~~r~i~d~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~ei~~laV 80 (162)
T d1qsra_ 2 DFDILTNDGTHRNMKLLIDLKNIFSRQLP-KMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (162)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHTSTTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHhhCcCCcEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEE
Confidence 466777777666555533 33444343 33334443332 2577888899999999998777778899999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
+|+|||+|+|++|+++++++|++.|++.+++.+ +.+.+||+|+||+..+. +|...+..|...-.+.+.|..-+
T Consensus 81 ~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~~--~~~~~~~~~~k~y~~~~~M~~~l 154 (162)
T d1qsra_ 81 TANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHR--MPQEKWKGYIKDYDGGTLMECYI 154 (162)
T ss_dssp CGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHTTCBSSCS--SCHHHHBTTBCCCTTSEEEEEEC
T ss_pred cHHHccCchHHHHHHHHHHHHHhCCCeEEEEecCCccHHHHHhCCCeeecc--CChhHhcCcccCCCCeEEEEEec
Confidence 999999999999999999999999999999987 57899999999986543 35555544444445777776655
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Probab=99.61 E-value=5.7e-15 Score=133.32 Aligned_cols=123 Identities=21% Similarity=0.303 Sum_probs=98.5
Q ss_pred ccccCCcccHH----HHHHHHHHHHHc----CcCccCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeecC
Q 010815 341 GTRTAKVTDLS----GIKQIIQPLVES----GALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 401 (500)
Q Consensus 341 ~iR~a~~~D~~----~I~~L~~~~~~~----~~~~~~s~~~~~~~l-----------~~~~v~~~dg~IVG~~~l~~~~~ 401 (500)
+||+++.+|++ .+.+++.+.... ++..+.+.+....++ ..++++++++++||++.+.....
T Consensus 2 ~iR~~~~ed~~~~~~~l~~ll~d~~~~g~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~ 81 (170)
T d1ghea_ 2 QLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQK 81 (170)
T ss_dssp EEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred ceEECCHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEeeccc
Confidence 58999999985 677776665443 244556666544322 24788899999999999876433
Q ss_pred C---CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 402 E---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 ~---~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
. ..++|..++|+|+|||+|+|+.|+++++++++++|++.+.+.+ +.+.+||+|+||+.++..
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~fY~k~GF~~~g~~ 149 (170)
T d1ghea_ 82 PNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 149 (170)
T ss_dssp TTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred cCCCcEEEEEEEEEcchhhcCCcHHHHHHHHHHHHHHcCCceEeeecccchHHHHHHHHCCCEEEEEe
Confidence 2 4589999999999999999999999999999999999999876 578999999999998763
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Probab=99.61 E-value=2.4e-15 Score=131.44 Aligned_cols=133 Identities=20% Similarity=0.221 Sum_probs=101.8
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCc
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 417 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~--~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yR 417 (500)
..|+..+..|.+.|.+.+.+.....++.. ...... .++|.++++++||++..... ...++|..++|+|+||
T Consensus 4 ~~i~~~t~~~~~~I~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V~~~~r 76 (140)
T d1y9wa1 4 KHIENGTRIEGEYIKNKVIQYNMSILTDE-----VKQPMEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVR 76 (140)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHTSCGG-----GCCCCEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGT
T ss_pred chhcCCcHHHHHHHHHHHHHHHHhhChHH-----HhCcccceEEEEEeCCCcEEEEEEEEEe--cCeeEEEEEEECcccc
Confidence 36888888999888887766544433211 111121 35677888999999988754 3678999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEecC
Q 010815 418 GQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 418 G~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
|+|+|+.|+++++++|++.|++.+.+.+ ++|++||+|+||+.++...- | ......++|.|.|
T Consensus 77 g~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g~~~~-------~-~~~~~~~~m~K~L 140 (140)
T d1y9wa1 77 HDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------H-PKGHSQHFFEKRL 140 (140)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------C-STTCCEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhccceEEEEeechhhHHHHHHhCCCEEEEEECC-------C-CCCCcEEEEEeEC
Confidence 9999999999999999999999999988 56899999999999986421 1 1234567777754
|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase SP0256 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.61 E-value=5.6e-16 Score=134.91 Aligned_cols=124 Identities=16% Similarity=0.115 Sum_probs=97.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
++||+++..|++++.+|+....... ...+.+.+...+ ..++++.+++++||++.+.. .....++|..++|+|+|
T Consensus 2 i~Ir~~~~~d~~ei~~l~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~l~V~~~~ 78 (137)
T d2atra1 2 ITIKKQEIVKLEDVLHLYQAVGWTN--YTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPSY 78 (137)
T ss_dssp EEEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTTS
T ss_pred EEEEeCChhhHHHHHHHHHHcCCCC--CCCCHHHHHHHHhCCcEEEEEEECCEEEEEEEEEc-cCCceEEEEEEEEEHHH
Confidence 5799999999999999986532111 112333444433 35778899999999998874 34578899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEeceeccc
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp 466 (500)
||+|+|++|++++++.+++.++..+.+.+ ..+.+||+|+||+..+....+
T Consensus 79 rg~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~GF~~~~~~~~~ 129 (137)
T d2atra1 79 QRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTYDCT 129 (137)
T ss_dssp CSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGGTCC
T ss_pred cCchHHHHHHHHHHHHHHHCCCeEEEEeecHHHHHHHHhCCCEECccCCcc
Confidence 99999999999999999999988877766 678999999999998776544
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Probab=99.61 E-value=3.7e-15 Score=130.15 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=97.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------CCCeEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEVA 408 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~~-------~~~~~~I~ 408 (500)
+.||+++.+|++.+.+++...+.... .......+...+ ..++++.++++++|++.+.... ....+++.
T Consensus 3 m~Ir~~~~~d~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 81 (147)
T d1s3za_ 3 MDIRQMNKTHLEHWRGLRKQLWPGHP-DDAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLE 81 (147)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSC-HHHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHCCCCC-cHHHHHHHHHHhhCCCcEEEEEEECCEEEEEEEEEeecCcccccCCCCeEEEE
Confidence 46999999999999999887654332 111222232222 3467778899999999876432 23568899
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|+++++++|++.|++.+.+.+ +.+.+||+|+||++++..
T Consensus 82 ~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY~k~GF~~~~~~ 140 (147)
T d1s3za_ 82 GIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 140 (147)
T ss_dssp EEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEECHHHcCCcHHHHHHHHHHHHhhhccccceEEEEcCCCHHHHHHHHHCCCEEECeE
Confidence 9999999999999999999999999999999999998 468999999999987653
|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase TTHA1209 species: Thermus thermophilus [TaxId: 274]
Probab=99.60 E-value=6.2e-15 Score=132.54 Aligned_cols=127 Identities=18% Similarity=0.189 Sum_probs=98.3
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC--------ccCCHHHH----Hhhc------Cc-EEEEEECCeEEEEEEEeeec
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEEL----LKAL------DS-FYVVEREGQIIACAALFPFF 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~--------~~~s~~~~----~~~l------~~-~~v~~~dg~IVG~~~l~~~~ 400 (500)
+.||+++++|++.|.++..+.+...+. ...+.+.. .+.+ .. +++.+++++++|++.+.+..
T Consensus 1 i~IR~a~~~D~~~i~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 80 (174)
T d2cy2a1 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHhccChHHHHHHHHHHHhcCCCCceEEEEEEcCCEEEeeeeccccc
Confidence 469999999999999999887654332 11222221 1221 12 44446678999999887543
Q ss_pred C----CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccc
Q 010815 401 K----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 401 ~----~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp 466 (500)
. ...++|..++|+|+|||+|+|+.|++.+++++++.|++++.+.+ +.+++||+|+||+..+....+
T Consensus 81 ~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~y~k~GF~~~g~~~~~ 154 (174)
T d2cy2a1 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREIE 154 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccCCceEEEEEEEcHHHhhCCCchHHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHCCCEEEeEEEEe
Confidence 2 35688999999999999999999999999999999999999988 568999999999999876554
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Probab=99.60 E-value=9.8e-16 Score=136.07 Aligned_cols=121 Identities=19% Similarity=0.244 Sum_probs=92.6
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCc---C----ccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEc
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGA---L----VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 413 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~---~----~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~ 413 (500)
.||..+..| +++..|+.++...-. + ...+.+.+...-..+|++++++++|||+.+.+.. +..++|..++|+
T Consensus 2 ~I~~~~~~~-~~i~~L~~~~~~~~~~~~p~e~~~~l~~~~l~~~~~~~~va~~~~~~vG~~~~~~~~-~~~~~i~~~~V~ 79 (151)
T d1yx0a1 2 HIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELD-TRHGEIKSMRTS 79 (151)
T ss_dssp CEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEEE-TTEEECCCCCCS
T ss_pred eeEECCCCC-HHHHHHHHHHHHHHHhcCCchhhhccCHhHccCCCeEEEEEEECCEEEEEEEEEecc-CceEEEEeeeeC
Confidence 355444455 666677655433211 1 1234555544445689999999999999987544 578999999999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHhCCCeEecee
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~------~~a~~fYek~GF~~~~~~ 463 (500)
|+|||+|+|++|+++++++|+++|++.+.+.| ..|++||+|+||++++..
T Consensus 80 p~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~~~~~~ 135 (151)
T d1yx0a1 80 ASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF 135 (151)
T ss_dssp TTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC
T ss_pred HHHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHcCCEECCcc
Confidence 99999999999999999999999999999975 368999999999997643
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Probab=99.60 E-value=5.5e-15 Score=129.57 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=94.5
Q ss_pred cccccCCcccHHHHHHHHHHHHH----cCcCccCCHHHHHh---h----cCcEEEEEECCeEEEEEEEeee-----cCCC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVE----SGALVRRTDEELLK---A----LDSFYVVEREGQIIACAALFPF-----FKEK 403 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~----~~~~~~~s~~~~~~---~----l~~~~v~~~dg~IVG~~~l~~~-----~~~~ 403 (500)
++||+++++|++.|.+++.+... .....+........ . -..+++++.+++++|++.+... ....
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~ 81 (150)
T d1z4ea1 2 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 81 (150)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhhhccccccccchhHHHHHHHHHhcCCCcEEEEEEECCceEEEEEEEeecccCcCCCC
Confidence 47999999999999999865211 11112222221111 1 1357778999999999987532 2235
Q ss_pred eEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 404 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 404 ~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
.++|..++|+|+|||+|||+.|+++++++|++.|++.|.+.+ +.+++||+|+||++.+.
T Consensus 82 ~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 144 (150)
T d1z4ea1 82 RATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 144 (150)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred EEEEEEEEcCHHHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHHCCCEEcce
Confidence 689999999999999999999999999999999999999988 46899999999998754
|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0244 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.59 E-value=5.9e-15 Score=130.95 Aligned_cols=126 Identities=19% Similarity=0.248 Sum_probs=97.2
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC---CCeEEEE
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---EKCGEVA 408 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~---~~~~~I~ 408 (500)
+.++||+++++|++.+.+|....+..... .+.....+...+ ..+++++.++++||++.+.+... ....++.
T Consensus 3 ~~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~ 82 (161)
T d2ae6a1 3 TSLTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL 82 (161)
T ss_dssp CCEEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHhhhcCCcccCChhhHHHHHHhCCCCcEEEEEECCEEEEEEeecccccccccceEEEE
Confidence 44689999999999999997665433222 222333344443 46888899999999999875332 2457888
Q ss_pred EEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 409 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 409 ~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++|+|+|||+|+|+.|++.+++++++.|++++.+.+ .++++||+|+||+..+..
T Consensus 83 ~~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~~~g~~ 141 (161)
T d2ae6a1 83 SIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHF 141 (161)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeccccccccccchhheeeccccccchhheehhccccHHHHHHHHHCCCEEEEEE
Confidence 9999999999999999999999999999999999887 578999999999998754
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.58 E-value=1e-14 Score=129.93 Aligned_cols=129 Identities=17% Similarity=0.131 Sum_probs=102.7
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCc-CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeee-------------
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF------------- 399 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~-~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~------------- 399 (500)
+..+||+++++|++.+.++....+.... ..+++.+.+...+ ..+++++.+++++|++.....
T Consensus 4 P~~~iR~~t~~D~~~l~~l~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~ 83 (166)
T d1cjwa_ 4 PANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALH 83 (166)
T ss_dssp CSSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCC
T ss_pred ChHHhccCCHHHHHHHHHHHHHhCCcccccCcccHHHHhhhhhcCCceEEEEEECCceeeeecccccccccchhhhhhcc
Confidence 3467999999999999999877554322 3456666665554 468899999999998876421
Q ss_pred -cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHhCCCeEeceeccc
Q 010815 400 -FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEMIP 466 (500)
Q Consensus 400 -~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~-~~a~~fYek~GF~~~~~~~lp 466 (500)
.....++|..++|+|+|||+|+|+.|++.+++++++. ++..+.+.+ +.+++||+|+||+.++.....
T Consensus 84 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~~~ai~fY~k~GF~~~G~~~~~ 153 (166)
T d1cjwa_ 84 RPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIV 153 (166)
T ss_dssp CTTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEECSCC
T ss_pred cCCCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhCCCceEEEecCHHHHHHHHHCCCEEEcceeeE
Confidence 1235789999999999999999999999999998876 677788776 679999999999999976544
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=1.5e-14 Score=130.03 Aligned_cols=145 Identities=14% Similarity=0.192 Sum_probs=104.1
Q ss_pred ccccCCcccHHHHHHHH---HHHHHcCcCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQII---QPLVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 412 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~---~~~~~~~~~~~~s~~~~~~~l-----~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V 412 (500)
++|.++.+|.++-..++ ...+...++ ....+.+.+.+ ..+++++.++++||++++....+...++|..++|
T Consensus 3 ~~r~i~~~~~~e~~~~L~~~~~if~~~lp-~~~~~~i~r~~~d~~~~~~~v~~~~~~iVG~~~~~~~~~~~~aeI~~laV 81 (164)
T d1ygha_ 3 EFRVVNNDNTKENMMVLTGLKNIFQKQLP-KMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAI 81 (164)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHcC-CccHHHHHHHHhccCCceEEEEEeCCeEEEEEEEEecCCCCEEEEEEEEE
Confidence 45666655544433332 223333332 33444444332 3578889999999999988777777899999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceEEEEe-cCC
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK-LLP 488 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~~~kk-ll~ 488 (500)
+|+|||+|+|++|++++++++++.+...+.+.+ +.|.+||+|+||+.. ..+|...+..|..+..+.++|.. +.|
T Consensus 82 ~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~--~~~~~~~~~gy~kd~e~~ilM~~~l~p 158 (164)
T d1ygha_ 82 SSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKE--ITLDKSIWMGYIKDYEGGTLMQCSMLP 158 (164)
T ss_dssp CTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSS--CCSCHHHHBTTBCCTTCCEEEEEECCC
T ss_pred CchhccCHHHHHHHHHHHHHHHhhCceEEEEEecCHHHHHHHHhcCCEEe--cccchhhhcCcccCCCCeEEEEEEcCC
Confidence 999999999999999999999987765555555 579999999999764 33566666677766778888884 443
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.57 E-value=2.9e-14 Score=128.99 Aligned_cols=126 Identities=24% Similarity=0.342 Sum_probs=99.7
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcC---ccCCHHHHHhhc-------------CcEEEEEECCeEEEEEEEeeecC---
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK--- 401 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~---~~~s~~~~~~~l-------------~~~~v~~~dg~IVG~~~l~~~~~--- 401 (500)
.||+++.+|.+.|.+|+...+.+... .....+.....+ ...++++.+++++|+....+...
T Consensus 2 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~e~~~~i~g~~~~~~~~~~~~ 81 (189)
T d1u6ma_ 2 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 81 (189)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred EeeeCcHHHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHhCcccccccceEEEEEEcCeEEEEEEEeccccccc
Confidence 48999999999999999887754322 223333322221 24788999999999987753211
Q ss_pred ---------------------------CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHH
Q 010815 402 ---------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 450 (500)
Q Consensus 402 ---------------------------~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~ 450 (500)
.+.++|..++|+|+|||+|+|+.|+++++++|++.|++.+.+.+ +.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~ 161 (189)
T d1u6ma_ 82 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 161 (189)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred cchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchhHHHHHHHHhcCCceeEEEEcCCCHHHHH
Confidence 13578999999999999999999999999999999999999888 46899
Q ss_pred HHHhCCCeEeceeccc
Q 010815 451 WFKSRGFRECSIEMIP 466 (500)
Q Consensus 451 fYek~GF~~~~~~~lp 466 (500)
||+|+||+.++...++
T Consensus 162 ~Yek~GF~~~~~~~~~ 177 (189)
T d1u6ma_ 162 LYASKGFKDVTTMTIS 177 (189)
T ss_dssp HHHTTTCEEEEEEEET
T ss_pred HHHHCCCEEEEEEEEC
Confidence 9999999999876554
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=5.5e-15 Score=130.30 Aligned_cols=121 Identities=22% Similarity=0.339 Sum_probs=92.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHh-------hc-------------C-cEEEEEECCeEEEEEEEee
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-------AL-------------D-SFYVVEREGQIIACAALFP 398 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~-------~l-------------~-~~~v~~~dg~IVG~~~l~~ 398 (500)
.+||+++++|++++.++++....... .+.+.+.. .. . .+++.+.+++++|++.+..
T Consensus 5 ~~IR~~~~~D~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~ 81 (157)
T d1i12a_ 5 FYIRRMEEGDLEQVTETLKVLTTVGT---ITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 81 (157)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSCCCC---CCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhccc---cCHHHHHHHHHhhhhhhhHHHhhhhcccccceEEEEEEECCEEEEEEEEec
Confidence 38999999999999999754322111 11111111 00 1 2345556899999998753
Q ss_pred ec-----CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 399 FF-----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 399 ~~-----~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
.. ....++|..++|+|+|||+|+|+.|+++++++|+++|++.+++.+ ..+++||+|+||+..+..
T Consensus 82 ~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y~k~GF~~~g~~ 152 (157)
T d1i12a_ 82 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVE 152 (157)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEE
T ss_pred cccccccCcceeEEEEEEecHhhcCCCchHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHhCCCEEeeEE
Confidence 22 235678999999999999999999999999999999999999988 678999999999998765
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Neisseria meningitidis [TaxId: 487]
Probab=99.56 E-value=1.2e-13 Score=130.54 Aligned_cols=200 Identities=15% Similarity=0.064 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHHHcCCCceeeCCccCCCHHHHHHHHHHHhHHHHHHHHhhCCCCCchhh
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNI 86 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~~~g~~~~~~~g~r~t~~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l 86 (500)
+.+++++|+.|++.|+++|+|+||+.............+ ..................... .+
T Consensus 29 i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~--------~~ 90 (236)
T d1ybda1 29 IVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMD----------RATADYMGMMATVMNALALKD--------AF 90 (236)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSC----------HHHHHHHHHHHHHHHHHHHHH--------HH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccccccccccccccc----------cchhhHHHHHHHHHHHHHHHH--------HH
Confidence 679999999999999999999999877765554433221 122222222222222222221 12
Q ss_pred hhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHH
Q 010815 87 RRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 166 (500)
Q Consensus 87 ~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~ 166 (500)
...+.. .......... -.........+...++.+.+|+..... +..+.|+|.+
T Consensus 91 ~~~~~~----~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~gdnD~l 143 (236)
T d1ybda1 91 ETLGIK----ARVQSALSMQ------------------QIAETYARPKAIQYLEEGKVVIFAAGT-----GNPFFTTDTA 143 (236)
T ss_dssp HHTTCC----EEEEESSCBS------------------SSCEECCHHHHHHHHHTTCEEEEESTT-----SSTTCCHHHH
T ss_pred HhcCcc----hhhhhhhhhh------------------hhhhhHHHHHHHhhhccCceecccccc-----ccccccchHH
Confidence 333332 1111111100 001234567788888888888864432 3457899999
Q ss_pred HHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCc
Q 010815 167 ATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 239 (500)
Q Consensus 167 a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (500)
|+.+|..++||.|+++|||||++ ++.+++..++.+|.... +
T Consensus 144 aa~vA~~~~ad~liilTdVdGvy~~dP~~~~~a~~~~~~~~~e~~~~---g----------------------------- 191 (236)
T d1ybda1 144 AALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---N----------------------------- 191 (236)
T ss_dssp HHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---T-----------------------------
T ss_pred HHHHHHHhCccceeeccCccchhhccccccccceeeccccHHHHHhc---C-----------------------------
Confidence 99999999999999999999983 45777888776553211 1
Q ss_pred cccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 010815 240 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 319 (500)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 319 (500)
+| | |. +.||..|.++|++ ++|+||+.|++
T Consensus 192 --------------------------~~-~---------------------m~--~~Aa~~a~~~gi~-v~I~ng~~~~~ 220 (236)
T d1ybda1 192 --------------------------LK-V---------------------MD--ATAFALCRERKLN-IVVFGIAKEGS 220 (236)
T ss_dssp --------------------------CC-S---------------------SC--HHHHHHHHHTTCC-EEEECTTSTTH
T ss_pred --------------------------ch-H---------------------HH--HHHHHHHHHCCCc-EEEEeCCCccH
Confidence 11 2 64 4488889999998 89999999997
Q ss_pred eeehhhhcCCCcceee
Q 010815 320 LLLELFKRDGMGTMVA 335 (500)
Q Consensus 320 ll~~l~~~~~~GT~i~ 335 (500)
| ..++.++..||.|.
T Consensus 221 i-~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 221 L-KRVITGEDEGTLVH 235 (236)
T ss_dssp H-HHHHHTCSCSEEEE
T ss_pred H-HHHHcCCCCCcEeC
Confidence 5 56677778999985
|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable spermine/spermidine acetyltransferase EF1086 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.56 E-value=3.5e-15 Score=130.86 Aligned_cols=124 Identities=11% Similarity=0.047 Sum_probs=93.9
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhh----cCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEc
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 413 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~----l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~ 413 (500)
|.++||+++++|++.+.++........+... ..+.+... -..++++..++++||++.+.... +..++|..++|+
T Consensus 1 M~i~ir~~t~~d~~~i~~l~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~i~~~~~~vG~~~~~~~~-~~~~~i~~~~v~ 78 (146)
T d2fl4a1 1 MEIHFEKVTSDNRKAVENLQVFAEQQAFIES-MAENLKESDQFPEWESAGIYDGNQLIGYAMYGRWQ-DGRVWLDRFLID 78 (146)
T ss_dssp CCCCCCCCCTTTHHHHHTCCCTTCHHHHHHH-HHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEECT-TSCEEEEEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHccccchhhhhh-HHHHHHHHhhCCCeEEEEEEECCEEEEEEEEEEcC-CCeEEEeeEEEc
Confidence 5578999999999999988433222111100 01111111 12467788999999999998544 567889999999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 414 PECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|+|||+|+|++|+.++++++.+ .+++.+.+.+ .+|++||+|+||+..+..
T Consensus 79 ~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~ 133 (146)
T d2fl4a1 79 QRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGEL 133 (146)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred HHHcCCChhhhhhhhhccccccccCceEEEeecccccHHHHHHHHHCCCEEeeEE
Confidence 9999999999999999887755 5899999988 579999999999999854
|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YitI species: Bacillus licheniformis [TaxId: 1402]
Probab=99.55 E-value=2.9e-14 Score=125.48 Aligned_cols=83 Identities=20% Similarity=0.243 Sum_probs=73.3
Q ss_pred EEEEEECCeEEEEEEEeee-----cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHh
Q 010815 381 FYVVEREGQIIACAALFPF-----FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKS 454 (500)
Q Consensus 381 ~~v~~~dg~IVG~~~l~~~-----~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek 454 (500)
.+++.+++++||++.+... .....+.|..++|+|+|||+|+|+.|+++++++|++.|++.+++.+ ..|++||+|
T Consensus 40 h~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~k 119 (145)
T d2jdca1 40 HLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKK 119 (145)
T ss_dssp EEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHH
T ss_pred EEEEEeCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHHHHHHHHHHHcCCCEEEEeccchHHHHHHH
Confidence 3778889999999988653 2245678999999999999999999999999999999999999987 579999999
Q ss_pred CCCeEecee
Q 010815 455 RGFRECSIE 463 (500)
Q Consensus 455 ~GF~~~~~~ 463 (500)
+||+..+..
T Consensus 120 ~GF~~~g~~ 128 (145)
T d2jdca1 120 LGFSEQGEV 128 (145)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEeCcE
Confidence 999999864
|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2290 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.55 E-value=5e-14 Score=124.94 Aligned_cols=143 Identities=15% Similarity=0.249 Sum_probs=105.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCC---CeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~----~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~~~~---~~~ 405 (500)
+.||+++.+|++.+.+++.+....... ...+.+....++ ..++++..+++++|++.+...... ..+
T Consensus 3 i~iR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 82 (164)
T d2ge3a1 3 VTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCG 82 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHhhcCCceEEEEEECCEEEEEEEeeccccCCcCcEE
Confidence 579999999999999998876554322 223344433332 457888899999999998764322 234
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhhhcccCCceE
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 481 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~~~~~~~s~~ 481 (500)
.+ .++|+|+|||+|+|+.|+..++++|++.|++++.+.+ ..+++||+|+||+..+...-- ..++....+.+
T Consensus 83 ~~-~~~v~~~~rg~Gig~~l~~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k~GF~~~g~~~~~----~~~~g~~~D~~ 157 (164)
T d2ge3a1 83 TL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDA----VSIDGHYIDSL 157 (164)
T ss_dssp EE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEE----EESSSCEEEEE
T ss_pred EE-EEEeChhhccccccccchhhhhheeccccccccccccCcchHHHHHHHHHCCCEEEEEEecE----EEECCEEEEEE
Confidence 55 6899999999999999999999999999999999988 579999999999988754200 01122223456
Q ss_pred EEEecC
Q 010815 482 YMKKLL 487 (500)
Q Consensus 482 ~~kkll 487 (500)
+|-.++
T Consensus 158 ~~~~l~ 163 (164)
T d2ge3a1 158 NMAIIF 163 (164)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776665
|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Probab=99.54 E-value=5e-14 Score=133.56 Aligned_cols=118 Identities=17% Similarity=0.117 Sum_probs=94.3
Q ss_pred eeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHHHHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHH
Q 010815 129 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 201 (500)
Q Consensus 129 ~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~ 201 (500)
......+..+++.+.+|++.... +..+.|+|.+|+.+|.+++||.|+++|||||++ ++.+++++++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~dnD~laa~vA~~~~Ad~lii~TDVdGvyt~dP~~~~~A~~i~~i~~~ 186 (236)
T d2a1fa1 112 TYNWSEAIKMLREKRVVIFSAGT-----GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYA 186 (236)
T ss_dssp ECCHHHHHHHHHTTCEEEEESTT-----SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHH
T ss_pred Hhhhhhhhhhhhhcccccccccc-----cCCCCCCcHHHHHHHHHhchhHHHHhhcccccccccccccccccccccccHH
Confidence 34567788888999999876543 334679999999999999999999999999983 357888888866
Q ss_pred HHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCCCccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccc
Q 010815 202 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 281 (500)
Q Consensus 202 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 281 (500)
|+.+. | +
T Consensus 187 e~l~~------------------------------------------------------------G-~------------ 193 (236)
T d2a1fa1 187 EVIDK------------------------------------------------------------E-L------------ 193 (236)
T ss_dssp HHHHT------------------------------------------------------------T-C------------
T ss_pred HHHhc------------------------------------------------------------C-C------------
Confidence 54221 1 2
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeehhhhcCCCcceee
Q 010815 282 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 335 (500)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ll~~l~~~~~~GT~i~ 335 (500)
|..|++||..|.++|++ ++|+||+.|+++ ..++.++..||.|.
T Consensus 194 ---------~v~k~~Aa~~a~~~gi~-v~I~ng~~~~~l-~~~l~Ge~~GTlI~ 236 (236)
T d2a1fa1 194 ---------KVMDLSAFTLARDHGMP-IRVFNMGKPGAL-RQVVTGTEEGTTIC 236 (236)
T ss_dssp ---------CSSCHHHHHHHHHHTCC-EEEEETTSTTHH-HHHHTCSCSSEEEC
T ss_pred ---------ceeHHHHHHHHHHCCCe-EEEEeCCCCcHH-HHHHcCCCCcceeC
Confidence 66799999999999997 899999999975 56778888999984
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Probab=99.53 E-value=1.3e-14 Score=126.59 Aligned_cols=124 Identities=13% Similarity=0.169 Sum_probs=94.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC--ccC--------CHHHHHhhcC---------cEEEEEECCeEEEEEEEeeec
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRR--------TDEELLKALD---------SFYVVEREGQIIACAALFPFF 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~--~~~--------s~~~~~~~l~---------~~~v~~~dg~IVG~~~l~~~~ 400 (500)
+.|||++++|++.+.+++.+....... ..+ +.+.+...+. .+++...+++++|++.+....
T Consensus 2 i~lRp~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~ 81 (155)
T d1ufha_ 2 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 81 (155)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEEEEEEcCCeEEEEEEEEeec
Confidence 579999999999999998654322111 111 1222333221 133446678999999887542
Q ss_pred --CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 --KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 --~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.++.++|..++|+|+|||+|+|+.|++.+++++++.|++.+.+.+ .+|++||+|+||++++..
T Consensus 82 ~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 150 (155)
T d1ufha_ 82 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDVV 150 (155)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCCC
T ss_pred cCCCCceEEEEEEEEHHHcCCcccchHHHHHHHHhhhcCCceeEEEEcCCCHHHHHHHHHCCCEEEeEE
Confidence 346789999999999999999999999999999999999999988 578999999999998753
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.2e-13 Score=121.95 Aligned_cols=105 Identities=14% Similarity=0.225 Sum_probs=88.0
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCC
Q 010815 379 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 457 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF 457 (500)
+.++++..++++||++++.++.+...++|..++|+|+|||+|+|+.||+++++++++.|++.+.+.+ +.|.+||+|+||
T Consensus 52 ~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~GF 131 (162)
T d1z4ra1 52 HKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGF 131 (162)
T ss_dssp CEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTE
T ss_pred ceEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEChhhhhhhHHHHHHHHHHHHHHHCCCcEEEEecCcchHHHHHhCCC
Confidence 4677888899999999999887778899999999999999999999999999999999999999887 679999999999
Q ss_pred eEeceeccchhhhhhhcccCCceEEEEe
Q 010815 458 RECSIEMIPEERRKRINLSRNSKYYMKK 485 (500)
Q Consensus 458 ~~~~~~~lp~~~~~~~~~~~~s~~~~kk 485 (500)
+.. ..+|...+..|-..-+...+|.=
T Consensus 132 ~~~--~~~~~~~~~~~ikdy~~~~lm~~ 157 (162)
T d1z4ra1 132 SKD--IKVPKSRYLGYIKDYEGATLMEC 157 (162)
T ss_dssp ESC--CCSCHHHHTTTSCCCTTCEEEEE
T ss_pred eEe--ccCchhHhcCCccCCCCeEEEEE
Confidence 763 33566666655444455666653
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.52 E-value=4.2e-14 Score=123.17 Aligned_cols=97 Identities=19% Similarity=0.133 Sum_probs=81.0
Q ss_pred EEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHhCCCe
Q 010815 381 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFR 458 (500)
Q Consensus 381 ~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~--~~a~~fYek~GF~ 458 (500)
+++.+.+|++||++..... ....+|..++|+|+|||+|+|+.|+++++++|++.|+.++.+.+ +.+++||+|+||+
T Consensus 39 ~~v~d~~g~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k~GF~ 116 (137)
T d2g3aa1 39 ITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFT 116 (137)
T ss_dssp EEEECTTCCEEEEEEEEEE--TTEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCE
T ss_pred EEEEeCCCCEEEEEEEEEe--CCeEEEEEEEEChhhcCCChHHHHHHHHHHHHHHcCCceEEEecccHhhHHHHHhCCCE
Confidence 5666778999999887754 36789999999999999999999999999999999999999987 5799999999999
Q ss_pred EeceeccchhhhhhhcccCCceEEEEecC
Q 010815 459 ECSIEMIPEERRKRINLSRNSKYYMKKLL 487 (500)
Q Consensus 459 ~~~~~~lp~~~~~~~~~~~~s~~~~kkll 487 (500)
.++...-. .+..+.++|+|-+
T Consensus 117 ~~g~~~~~--------~~~~~~~~m~K~l 137 (137)
T d2g3aa1 117 KIGSLGPL--------SSGQSITWLEKRF 137 (137)
T ss_dssp EEEEECCC--------TTSCCEEEEEEEC
T ss_pred EEEEECCC--------CCCCcEEEEEEEC
Confidence 98865211 2345678888753
|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2161 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.51 E-value=7.4e-14 Score=120.88 Aligned_cols=110 Identities=13% Similarity=0.151 Sum_probs=86.2
Q ss_pred ccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHH
Q 010815 348 TDLSGIKQIIQPLVESGALVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 424 (500)
Q Consensus 348 ~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~---~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~ 424 (500)
.+.+++.+|.. .....+++.+.....+. .++++.+++++||++.+.. .....++|..++|+|+|||||+|+.
T Consensus 9 p~~e~~~~Lr~----~~g~~~~s~e~~~~~l~~s~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p~~rg~GiG~~ 83 (133)
T d1y7ra1 9 PTCEDYCALRI----NAGMSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSYQGQAYGSL 83 (133)
T ss_dssp CCHHHHHHHHH----HTTCCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGGCSSSHHHH
T ss_pred CCHHHHHHHHH----HcCcCCCCHHHHHHHhcCCeEEEEEEECCEEEEEEEEEe-ccCCEEEEEEEEEeecccchHHHHH
Confidence 35666666642 22334567777766652 4567788999999998863 4457899999999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEece
Q 010815 425 LLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSI 462 (500)
Q Consensus 425 Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~ 462 (500)
|+++++++++++|++++.+.+ +.+.+||+|+||++.+.
T Consensus 84 Ll~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~~ 124 (133)
T d1y7ra1 84 IMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred HHHHHHHHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeCC
Confidence 999999999999988766554 57899999999998753
|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YjcF species: Bacillus subtilis [TaxId: 1423]
Probab=99.51 E-value=8.2e-14 Score=121.84 Aligned_cols=116 Identities=20% Similarity=0.209 Sum_probs=91.8
Q ss_pred CCcccHHHHHHHHHHHHHcCcCccCC--HHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHH
Q 010815 345 AKVTDLSGIKQIIQPLVESGALVRRT--DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 422 (500)
Q Consensus 345 a~~~D~~~I~~L~~~~~~~~~~~~~s--~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG 422 (500)
-++++++.++++..+.+..+...+.. .+.++. ....+++..++++||++.+... +..++|..++|+|+|||+|+|
T Consensus 7 ~~~~el~~~~~iR~~VF~~Eq~ip~~~e~D~~D~-~~~h~v~~~~~~~vg~~~~~~~--~~~~~i~~l~V~~~~rg~GiG 83 (140)
T d1q2ya_ 7 KNEEQLKDAFYVREEVFVKEQNVPAEEEIDELEN-ESEHIVVYDGEKPVGAGRWRMK--DGYGKLERICVLKSHRSAGVG 83 (140)
T ss_dssp CSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTTGG-GSEEEEEEETTEEEEEEEEEEE--TTEEEEEEEECCGGGTTTTHH
T ss_pred CCHHHHHHHHHHHHHHeeeccCCChhhhcCCCCc-ccEEEEEeccccEEEEEeeecc--cceeeEeeeEEchhhcCCcHH
Confidence 35667888888877766554332221 111111 2345778889999999999753 468999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEecee
Q 010815 423 DKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 423 ~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~~~ 463 (500)
+.|++++++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 84 ~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY~k~GF~~~~~~ 125 (140)
T d1q2ya_ 84 GIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSEK 125 (140)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCSC
T ss_pred HHHHHHHHHHHHHcCCCceEEeCCHHHHHHHHHCcCEEcCCe
Confidence 99999999999999999999988 678999999999998754
|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase PA4026 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.51 E-value=2.8e-14 Score=125.48 Aligned_cols=122 Identities=20% Similarity=0.180 Sum_probs=93.4
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--------C--cEEEEEECCeEEEEEEEeeecC----CCeE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------D--SFYVVEREGQIIACAALFPFFK----EKCG 405 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--------~--~~~v~~~dg~IVG~~~l~~~~~----~~~~ 405 (500)
++||.++.+|++.|.+|+...... +..+.+.+.....+ . .+++.+.++++||++.+.+... ...+
T Consensus 1 M~Ir~a~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 79 (153)
T d2euia1 1 MRIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVW 79 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHhCCCCcEEEEEEecCCeEEEEEeeecccccccccceE
Confidence 468999999999999998765432 22222222222221 1 2334467799999998865322 3457
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEece
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~ 462 (500)
+|..++|+|++||+|+|+.|+++++++|+++|++.+.+.+ .+|++||+|+||+..+.
T Consensus 80 ~i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~a~~~Y~k~GF~~~~~ 140 (153)
T d2euia1 80 ILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQE 140 (153)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCS
T ss_pred EecceeeeecccCcchhhHHHHHHhhhHHHhhhccceEEecCCCHHHHHHHHHCCCEEcce
Confidence 8999999999999999999999999999999999999998 57999999999997543
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Probab=99.51 E-value=7.4e-14 Score=123.85 Aligned_cols=115 Identities=21% Similarity=0.299 Sum_probs=90.1
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCC
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 416 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~y 416 (500)
.+.++.+.++++|.-.-+.. . .+.+.+...+ ..+|++.+++++||++.+.. ..+..++|..++|+|+|
T Consensus 2 ~~~ie~i~~~~~P~~ll~~a----D-----p~~~~i~~yl~~~~~~v~~~~g~ivG~~~~~~-~~~~~~~i~~l~V~p~~ 71 (152)
T d1y9ka1 2 SVVIERIPKEAIPKSLLLLA----D-----PSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHL 71 (152)
T ss_dssp CCEEEEECGGGCCHHHHHHH----C-----CCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGGG
T ss_pred ceEEEecChhhCChhHHhcc----C-----CCHHHHHHHhcCCeEEEEEECCEEEEEEEEEE-cCCCEEEEEEEEEcHHH
Confidence 45677777777775332211 1 1223333322 46889999999999988874 45678999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
||+|+|+.|+++++++|++.|++.+.+.| ..+++||+|+||+..+..
T Consensus 72 rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~~~~ 122 (152)
T d1y9ka1 72 QGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 122 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcchHHHHHHHHHHHHcCCceEEEEeccCCHHHHHHHHHCCCEEEeEE
Confidence 99999999999999999999999999987 478999999999998764
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HPA2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.51 E-value=3.7e-14 Score=124.13 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=91.1
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHh---hc----C----cEEEEEECCeEEEEEEEeeecC----CCe
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---AL----D----SFYVVEREGQIIACAALFPFFK----EKC 404 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~---~l----~----~~~v~~~dg~IVG~~~l~~~~~----~~~ 404 (500)
++||+++++|.+.+.+|+..+... +....+.+.... ++ . .+++.+.++.+||++.+.+... ...
T Consensus 3 i~IR~~~~~D~e~~~~L~~~y~~f-y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~~~~~ 81 (150)
T d1qsma_ 3 ITVRFVTENDKEGWQRLWKSYQDF-YEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDK 81 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHH-hcccCchHHHHHHHHHHhCCCcccceeeeehhhcCcEEEEEEEeeccccccccch
Confidence 579999999999999998764332 111222222211 11 1 1233355689999998875432 356
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEe
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 460 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~ 460 (500)
++|..++|+|++||+|+|++|+++++++|++.|++.|.+.+ ++|++||+|+||+..
T Consensus 82 ~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GFk~~ 141 (150)
T d1qsma_ 82 IYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAP 141 (150)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECS
T ss_pred heehhhhhhhcccCccHHHHHHHHHHhhhcccccccceeEEccCCHHHHHHHHHcCCCCc
Confidence 78999999999999999999999999999999999999999 579999999999854
|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=3.4e-14 Score=126.48 Aligned_cols=124 Identities=22% Similarity=0.248 Sum_probs=94.6
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCc---CccCCHHHHHhhc----C--cE--------EEEEECCeEEEEEEEeeecC-
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL----D--SF--------YVVEREGQIIACAALFPFFK- 401 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~---~~~~s~~~~~~~l----~--~~--------~v~~~dg~IVG~~~l~~~~~- 401 (500)
.+||+++++|++.|.+|+++...... ....+.+.+.... . .. ++...+++++|++.+....+
T Consensus 2 f~IR~at~~D~~~i~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (167)
T d2b5ga1 2 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 81 (167)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhccccchhhhhhhhccCceeEEeeCCeEEEEEEEEeeccc
Confidence 47999999999999999987543221 1233455554432 1 11 22334678999998765432
Q ss_pred --CCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 402 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 402 --~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
....++..++|+|+|||+|+|+.|+++++++|+++|++.|.+.| ++|++||+|+||+..+..
T Consensus 82 ~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~~~~~ 149 (167)
T d2b5ga1 82 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSE 149 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHHH
T ss_pred ccccceecceeeeeeccccCCCchhhhhhhhhhhcccCcceeeeecccCcHHHHHHHHHCCCEECcEe
Confidence 24567889999999999999999999999999999999999988 579999999999997643
|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.4e-13 Score=120.18 Aligned_cols=124 Identities=23% Similarity=0.263 Sum_probs=91.9
Q ss_pred cccccCCcccHHHHHHHHHHHHH---cCcCccCCHHHHHhhc------CcE--------EEEEECCeEEEEEEEeeec--
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFF-- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~---~~~~~~~s~~~~~~~l------~~~--------~v~~~dg~IVG~~~l~~~~-- 400 (500)
++||+++++|++.|.+|+++... ......++.+.+...+ ... .+...++.++|++.+....
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (167)
T d2beia1 2 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 81 (167)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHhhccccchhhhhhhhcccccceeecceeeeEEEeeccccc
Confidence 57999999999999999876432 2223445666654432 111 1223457788887765432
Q ss_pred -CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 401 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 401 -~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..+..++..++|.|+|||+|+|+.|++++++++++.|+++|.+.+ .+|++||+|+||++++..
T Consensus 82 ~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 149 (167)
T d2beia1 82 WKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTEA 149 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHHHH
T ss_pred ccccceeccceecCHhhcCCCcchhhHHHHHHHHhhhcccccceeeccCCHHHHHHHHHCCCEEccEe
Confidence 235678889999999999999999999999999999999999988 579999999999998643
|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YvbK (BSu33890) species: Bacillus subtilis [TaxId: 1423]
Probab=99.47 E-value=4.8e-13 Score=118.48 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=76.9
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHh
Q 010815 379 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKS 454 (500)
Q Consensus 379 ~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek 454 (500)
..+|++..++++||++.+.+. .+..+++..++|+|+|||+|+|+.|+++++++|++.|++.+.+.+ ..|++||+|
T Consensus 35 ~~~~v~~~~g~ivG~~~~~~~-~~~~~~l~~i~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek 113 (152)
T d1yvka1 35 GECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQK 113 (152)
T ss_dssp SEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred CeEEEEEECCEEEEEEEEEec-CCCEEEEEEeeeCHhHcCCCcccHHHHHHHHHhhhhcccccceeeccCCHHHHHHHHH
Confidence 478999999999999999865 457899999999999999999999999999999999999999988 478999999
Q ss_pred CCCeEecee
Q 010815 455 RGFRECSIE 463 (500)
Q Consensus 455 ~GF~~~~~~ 463 (500)
+||+..+..
T Consensus 114 ~GF~~~~~~ 122 (152)
T d1yvka1 114 CGFRIQAID 122 (152)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999998865
|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH1933 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.47 E-value=1.8e-13 Score=119.95 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=87.5
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccC-CHH---H-----HHhhcCcEEEEEECCeEEEEEEEeeec-----CCCeEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRR-TDE---E-----LLKALDSFYVVEREGQIIACAALFPFF-----KEKCGE 406 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~-s~~---~-----~~~~l~~~~v~~~dg~IVG~~~l~~~~-----~~~~~~ 406 (500)
.+|+++.+|++.+.+++.+.......... ..+ . +......++++..+++++|++.+.... ....++
T Consensus 8 ~i~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vg~~~~~~~~~~~~~~~~~~~ 87 (157)
T d1wwza1 8 KLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGA 87 (157)
T ss_dssp ECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEEE
T ss_pred ecccCCHHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhCCCCeEEEEEECCEEEEEEEeeccccccccCCcEEE
Confidence 46667777777777776654332111111 111 1 122224688999999999998876431 124578
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|..++|+|+|||+|+|+.|+.+++++|++.+.+ +.+.+ ..|++||+|+||+.++..
T Consensus 88 i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~-~~~~v~~~N~~a~~~Y~k~GF~~~g~~ 147 (157)
T d1wwza1 88 IHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDT-IELWVGEKNYGAMNLYEKFGFKKVGKS 147 (157)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHTTCSE-EEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEEehhccchhHHHHHHHHHHHHHHhCCc-eEEEEcCCCHHHHHHHHHCCCEEEeEE
Confidence 999999999999999999999999999988864 44444 579999999999999865
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.46 E-value=2.6e-13 Score=119.23 Aligned_cols=116 Identities=21% Similarity=0.299 Sum_probs=84.5
Q ss_pred ccHHHHHHHHHHHHHcCcCccCCHHH--------HHhhc----CcEEEE-EECCeEEEEEEEeeecC----CCeEEEEEE
Q 010815 348 TDLSGIKQIIQPLVESGALVRRTDEE--------LLKAL----DSFYVV-EREGQIIACAALFPFFK----EKCGEVAAI 410 (500)
Q Consensus 348 ~D~~~I~~L~~~~~~~~~~~~~s~~~--------~~~~l----~~~~v~-~~dg~IVG~~~l~~~~~----~~~~~I~~l 410 (500)
++++.+.++..+....-...+.+.+. +...+ ..++++ +.++++||++.+....+ ...++|..+
T Consensus 9 d~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l 88 (149)
T d1vkca_ 9 EYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDI 88 (149)
T ss_dssp GGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHhCCCceEEEEEecCCeEEEEEEEEeccCCCCCCcEEEEEEE
Confidence 45788888876654432222222221 11211 234554 55689999988864322 356789999
Q ss_pred EEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHhCCCeEecee
Q 010815 411 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 411 ~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~---~~a~~fYek~GF~~~~~~ 463 (500)
+|+|+|||+|+|+.|++++++++++.|++++.+.+ ++|++||+|+||+..+..
T Consensus 89 ~V~~~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A~~~Y~k~GF~~~~~~ 144 (149)
T d1vkca_ 89 EVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALI 144 (149)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCC
T ss_pred EECHHHcCCChHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEEEE
Confidence 99999999999999999999999999999999988 358999999999986543
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.42 E-value=1e-12 Score=119.40 Aligned_cols=110 Identities=28% Similarity=0.527 Sum_probs=86.1
Q ss_pred cCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeec--------------CCCeEEEEE
Q 010815 344 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF--------------KEKCGEVAA 409 (500)
Q Consensus 344 ~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~--------------~~~~~~I~~ 409 (500)
.....|.+.+..++.+.... .+......+||+..++++||++.+.... ..+.++|..
T Consensus 41 ~~~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~ 111 (182)
T d2gana1 41 KPNPNDFNGFREVYEPFLKF---------RLSQEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEF 111 (182)
T ss_dssp CCCTTCHHHHHHHHHHHHHH---------HHHTTCSEEEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHH---------HhcCCcceEEEEEECCEEEEEEEEeccCcccccccccccccCCCCEEEEEE
Confidence 34556777777766543322 3344456789999999999999886421 246789999
Q ss_pred EEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 410 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 410 l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
++|+|+|||+|||+.||+.++++|++.|++ +.+.+ +.|.+||+|+||+.+...
T Consensus 112 l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~-~~l~~~~~n~~a~~fY~k~GF~~~~~y 168 (182)
T d2gana1 112 FVVDPEFQGKGIGSTLLEFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKGFREIMRY 168 (182)
T ss_dssp EEECTTSTTSSHHHHHHHHHHHHHHHTTCE-EEEEECGGGSHHHHHHHTTTEEEEECC
T ss_pred EEECHhhcCCCHHHHHHHHHHHHHHHcCCe-EEEEEccCCHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999999999999986 55666 468999999999997654
|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA0115 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.39 E-value=5.4e-13 Score=117.77 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=90.8
Q ss_pred cccCCcccHHHHHHHHHHHHHcCcCccCC-HHHHHhhc-CcEEEEEECCeEEEEEEEeeec-CCCeEEEEEEEEccCCcC
Q 010815 342 TRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLKAL-DSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 418 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~~~~~~~~~~~~~s-~~~~~~~l-~~~~v~~~dg~IVG~~~l~~~~-~~~~~~I~~l~V~p~yRG 418 (500)
+..++.+++..+.+|..+.+..+...+.. .+..+..- ...+++.+++++|||+.+.+.. ..+...|..++|+|+|||
T Consensus 9 f~el~~~el~~i~~lR~~VFv~EQ~~~~~e~D~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg 88 (149)
T d1xeba_ 9 HADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARG 88 (149)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTT
T ss_pred hHHCCHHHHHHHHHHHHHheEecCCCCCCCCcCCcccCceEEEEEEeCCeEEEEEEEeeccccCCcEEEEEEEEehhhhc
Confidence 45566778888888877776554433221 11111111 2346678899999999987532 346789999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCC-CEEEEEc-HHHHHHHHhCCCeEeceec
Q 010815 419 QGQGDKLLDYIEKKAASLGL-DMLFLLT-TRTADWFKSRGFRECSIEM 464 (500)
Q Consensus 419 ~GiG~~Ll~~l~~~a~~~g~-~~I~l~~-~~a~~fYek~GF~~~~~~~ 464 (500)
+|+|+.||+++++++++++. +.|.+.+ ..+.+||+|+||+..+...
T Consensus 89 ~GiG~~L~~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~GF~~~g~~f 136 (149)
T d1xeba_ 89 QGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVY 136 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCCE
T ss_pred cChhHHHHHHHHHHHHHhCCCCEEEEeChHHHHHHHHHCCCEECCCcc
Confidence 99999999999999988754 5577776 4689999999999998653
|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Streptococcus pyogenes [TaxId: 1314]
Probab=99.35 E-value=3.8e-12 Score=119.59 Aligned_cols=200 Identities=13% Similarity=0.059 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEEECChHHHHHHHH-HcCCCceeeCCccCCCHHHHHHH-HHHHhHHHHHHHHhhCCCCCch
Q 010815 7 WLVMVQDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPIC 84 (500)
Q Consensus 7 ~~~i~~dIa~L~~~G~~~VIVHGgG~~i~~~~~-~~g~~~~~~~g~r~t~~~~l~~~-~~~~~~i~~~i~~~l~~~~~~~ 84 (500)
+.+++++|+.|++.|+++|+|+||+........ ..+.. ....... ...+.........
T Consensus 29 l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~--------- 88 (238)
T d1z9da1 29 VQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMD-----------RVQADYTGMLGTVMNALVMAD--------- 88 (238)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCC-----------HHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccccceeccccCCc-----------chhHHHHHHHHHHHHHHHHHH---------
Confidence 678999999999999999999999865543322 22111 1222222 2223332222222
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeCHHHHHHHHhCCCcEEEcCcccCCCCCeeecCHH
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 164 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd~~~I~~lL~~g~IPVi~~~~~~~~g~~~~i~~D 164 (500)
.+..+++. ............. ........+........++.. .. .......|.|
T Consensus 89 ~~~~~~i~----~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~~~~-~~----~~~~~~~~~d 142 (238)
T d1z9da1 89 SLQHYGVD----TRVQTAIPMQNVA-----------------EPYIRGRALRHLEKNRIVVFG-AG----IGSPYFSTDT 142 (238)
T ss_dssp HHHTTTCC----EEEEESSCBTTTB-----------------EECCHHHHHHHHHTTCEEEEE-ST----TSCTTCCHHH
T ss_pred HHhhCCcc----chhhhhhhhHHHH-----------------hhhhHHHHHhhhcccccccee-cc----eeccCCCCch
Confidence 34566665 2221111111000 011123444444433332222 21 2334466889
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccC-------CCCccccccCHHHHHHHHHhhhhhhhHHHhhhhhhhcccccccCCCCC
Q 010815 165 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 237 (500)
Q Consensus 165 ~~a~~lA~~l~Ad~li~lTdv~gv~-------~~g~~I~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (500)
.++..+|..++|+.++++|||||++ ++.++++.++..|...
T Consensus 143 ~~~~~~a~~~~a~~li~~tdVdGvy~~~P~~~~~a~~~~~~~~~~~~~-------------------------------- 190 (238)
T d1z9da1 143 TAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIK-------------------------------- 190 (238)
T ss_dssp HHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHT--------------------------------
T ss_pred HHHHHHHHHhhhhhhcccccccceecccccccccchhhccccccchhc--------------------------------
Confidence 9999999999999999999999983 3466777766544210
Q ss_pred CccccccCCCCccchhhhhcccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 010815 238 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 317 (500)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 317 (500)
.| + |..|+.||..|.++|++ ++|+||+.|
T Consensus 191 ----------------------------~g-~---------------------~~~k~~Aa~~a~~~gi~-v~I~nG~~p 219 (238)
T d1z9da1 191 ----------------------------RG-L---------------------KIMDATASTLSMDNDID-LVVFNMNEA 219 (238)
T ss_dssp ----------------------------TT-C---------------------CCSCHHHHHHHHHTTCE-EEEEETTST
T ss_pred ----------------------------cC-c---------------------chhHHHHHHHHHHCCCc-EEEEeCCCc
Confidence 11 1 23389999999999996 999999999
Q ss_pred ceeeehhhhcCCCcceeec
Q 010815 318 GVLLLELFKRDGMGTMVAS 336 (500)
Q Consensus 318 ~~ll~~l~~~~~~GT~i~~ 336 (500)
++| ..++.++..||.|+.
T Consensus 220 ~~i-~~~l~Ge~~GTlIt~ 237 (238)
T d1z9da1 220 GNI-QRVVFGEHIGTTVSN 237 (238)
T ss_dssp THH-HHHHTTCCCSEEEEC
T ss_pred chH-HHHHCCCCCceEecc
Confidence 975 566777889999974
|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 3-N-acetyltransferase species: Serratia marcescens [TaxId: 615]
Probab=99.35 E-value=9.7e-13 Score=112.95 Aligned_cols=116 Identities=13% Similarity=0.149 Sum_probs=82.9
Q ss_pred ccccCCcccHHHHHHHH---HHHHHcC---cCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeee----cCCCeEE
Q 010815 341 GTRTAKVTDLSGIKQII---QPLVESG---ALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF----FKEKCGE 406 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~---~~~~~~~---~~~~~s~~~~~~~l----~~~~v~~~dg~IVG~~~l~~~----~~~~~~~ 406 (500)
+.+.+.++|.+.+..++ .+.+.+. .....+.+.+...+ ..++++..++++||++.+... .....++
T Consensus 4 ~~~r~~P~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~ 83 (137)
T d1bo4a_ 4 RTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEIY 83 (137)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEEE
T ss_pred EEEeCCHhhHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEEECCeeeeecccccccCccCCCCEEE
Confidence 45556666766555554 3322211 11222334444433 235677889999999887653 2345678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCC
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 456 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~G 456 (500)
|..++|+|+|||+|+|+.|++++++++++.|++.|.+.+ .++++||+|+|
T Consensus 84 i~~l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G 137 (137)
T d1bo4a_ 84 IYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLG 137 (137)
T ss_dssp EEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEcHHHhhhchhhHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999 36899999987
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.31 E-value=7.8e-12 Score=105.07 Aligned_cols=102 Identities=25% Similarity=0.216 Sum_probs=75.1
Q ss_pred cccCCcccHHHHHHHH---HHHHHcCc-CccCCHH-------HHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEE
Q 010815 342 TRTAKVTDLSGIKQII---QPLVESGA-LVRRTDE-------ELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE 406 (500)
Q Consensus 342 iR~a~~~D~~~I~~L~---~~~~~~~~-~~~~s~~-------~~~~~l----~~~~v~~~dg~IVG~~~l~~~~~~~~~~ 406 (500)
||+++.+|.+.|.++. ........ ....+.. .+...+ ..+||++.++++||++.+........++
T Consensus 1 IR~~~kdd~~~I~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~ 80 (118)
T d2aj6a1 1 MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVN 80 (118)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred CCcCChhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHhhcCCCcEEEEEEECCEEEEEeeeccccCCCeEE
Confidence 6888999987776653 33222211 1122211 111111 3578999999999999988766677899
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 443 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l 443 (500)
|..++|+|+|||+|+|+.||+++++||++.|+++|.+
T Consensus 81 i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i~~ 117 (118)
T d2aj6a1 81 IELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISN 117 (118)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCC
T ss_pred EEEEEEchhhccCHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 9999999999999999999999999999999987654
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=99.29 E-value=5.9e-12 Score=122.31 Aligned_cols=118 Identities=19% Similarity=0.341 Sum_probs=94.6
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC------CCeEEEEEEEE
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAIGV 412 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~------~~~~~I~~l~V 412 (500)
.||+++++|++++.+|+...+...+. ..+.+.+.+ +.++++.+++++||++.+.+... -..+.|..++|
T Consensus 3 ~~~ka~~~d~~~l~~l~~~~F~~~~~---~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 79 (283)
T d2ozga2 3 KYTKASQENIQQLGNILEQCFVMSFG---DSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGI 79 (283)
T ss_dssp EEEECCTTTHHHHHHHHHHHTTCCTT---HHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHcCCCcC---cHHHHHHHhcCCCEEEEEECCEEEEEEEEEEeeeeECCeeeeEeeEEEEEE
Confidence 68999999999999998777655432 123333333 56899999999999999986421 13468999999
Q ss_pred ccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 413 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 413 ~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
+|+|||+|+|+.|++++++.++++|+....+.+ .+..||+|+||+....
T Consensus 80 ~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 128 (283)
T d2ozga2 80 APEYRGDGAAIALIQHTLQEISEQDIPISVLYP-ATQRLYRKAGYEQAGS 128 (283)
T ss_dssp CGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred CcccccCChHHHHHHHHHHHHHhcCceEEEccC-CccchHHcCCCeEece
Confidence 999999999999999999999999987766655 4679999999998753
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.27 E-value=1.2e-11 Score=120.15 Aligned_cols=121 Identities=12% Similarity=0.198 Sum_probs=94.5
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC---C---CeEEEEEEE
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---E---KCGEVAAIG 411 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l--~~~~v~~~dg~IVG~~~l~~~~~---~---~~~~I~~l~ 411 (500)
.+||+++++|++.+.+|+...+..... +...+.+.... ..++++.+++++||++.+.+..- + ..+.|..++
T Consensus 3 ~~iR~l~~~d~~~i~~l~~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~ 81 (285)
T d2hv2a2 3 KRVKKMGKEEMKEMFDLVIYAFNQEPT-AERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 81 (285)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCCCCC-hhHHHHHHHhhccCcEEEEEECCEEEEEEEEEEeEEEECCeeeeEEEEEEEE
Confidence 579999999999999998766543221 11122222222 46788899999999998876421 1 347899999
Q ss_pred EccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 412 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 412 V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
|+|+|||+|+|+.|++++++.++++|+..+.+.. .+.+||+++||+..+.
T Consensus 82 v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 131 (285)
T d2hv2a2 82 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 131 (285)
T ss_dssp ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred ECHHHcCCChHHHHHHHHHHHHHHhCCceeeeec-cchhhHhcCCcEEeee
Confidence 9999999999999999999999999998888876 4689999999998753
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.25 E-value=2e-11 Score=118.79 Aligned_cols=122 Identities=15% Similarity=0.248 Sum_probs=93.2
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcC-----ccCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeec---CC---
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFF---KE--- 402 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~-----~~~s~~~~~~~------l~~~~v~~~dg~IVG~~~l~~~~---~~--- 402 (500)
++||+++++|++++.+|++..+..... .......+... ...++++.++|++||++.+.++. .+
T Consensus 1 m~iR~~~~~d~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~ 80 (291)
T d2i00a2 1 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 80 (291)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHcCcccccchhcchhhhHHHHHhhccccccCcEEEEEECCEEEEEEEEEEeEEEECCeee
Confidence 469999999999999998765432211 01112222221 24678889999999999987542 11
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
....|..++|+|+|||+|+|++|++++++.++++|+....+.+ .+.+||+|+||+..+.
T Consensus 81 ~~~~i~~v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~-~~~~~Y~~~Gf~~~~~ 139 (291)
T d2i00a2 81 KMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFP-YNIPYYRRKGWEIMSD 139 (291)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred eEEEEEEEEEchhhcCCChHHHHHHHHHHHHHhcCCcEEEeec-cchhhHhcCCCEEecc
Confidence 3467999999999999999999999999999999998877765 4689999999998753
|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL species: Salmonella typhimurium [TaxId: 90371]
Probab=99.20 E-value=1.6e-10 Score=103.49 Aligned_cols=127 Identities=10% Similarity=0.091 Sum_probs=92.3
Q ss_pred cccccccccCCcccHHHHHHHHHHH---HHcCcC---ccCCHHH----HHhh-------cCcEEEEEECCeEEEEEEEee
Q 010815 336 SDLYEGTRTAKVTDLSGIKQIIQPL---VESGAL---VRRTDEE----LLKA-------LDSFYVVEREGQIIACAALFP 398 (500)
Q Consensus 336 ~d~~~~iR~a~~~D~~~I~~L~~~~---~~~~~~---~~~s~~~----~~~~-------l~~~~v~~~dg~IVG~~~l~~ 398 (500)
-...+.+|+++++|.+.+.+++.+. .....+ ...+.+. +... ...++++..++++||++.+..
T Consensus 5 ~~~~l~LR~~~~~d~~~l~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~ 84 (174)
T d1s7ka1 5 VSTTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNA 84 (174)
T ss_dssp CSSSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEE
T ss_pred cCCCEEEEcCCHHHHHHHHHHHHcCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHcCCCceeEEEEcCCceEEEeecc
Confidence 3455789999999999999997542 111111 0112222 1111 124677788999999999975
Q ss_pred e-cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 399 F-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 399 ~-~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
. .....+++ .++++|+|||+|+|+.++..+++++.+ .+++++.+.+ .+|+++|+|+||+..+..
T Consensus 85 ~~~~~~~~ei-g~~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~Gf~~eG~~ 154 (174)
T d1s7ka1 85 IEPINKAAYI-GYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 154 (174)
T ss_dssp EETTTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCeEEE-EEEEeehhccchhHHHHHHHHHhhhhhhcCcccceeecccCcHHHHHHHHHCCCEEEEEE
Confidence 4 34467888 678999999999999999999999965 6999999888 589999999999998754
|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein Rv1347c/MT1389 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.19 E-value=2.2e-11 Score=111.77 Aligned_cols=133 Identities=14% Similarity=-0.027 Sum_probs=101.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcC-cCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec----------
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF---------- 400 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~s~~~~~~~l--------~~~~v~~~dg~IVG~~~l~~~~---------- 400 (500)
..||+++.+|.+.+.+++++..-.. +....+.+....++ ...+++..+++.+|++.+....
T Consensus 34 ~~LR~~~~~D~~~l~~w~~dp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 113 (198)
T d1yk3a1 34 YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDA 113 (198)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCC
T ss_pred eEEEeCCHHHHHHHHHHHcChhhhhccCCCCCHHHHHHHHHHHhcCCccceEEEEECCEEEEEEEEEecccccccccccc
Confidence 5799999999999999987642222 22344544443332 2367778899999999886321
Q ss_pred CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH--HCCCCEEEEEc----HHHHHHHHhCCCeEeceeccchhhhhh
Q 010815 401 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA--SLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 472 (500)
Q Consensus 401 ~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~--~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~lp~~~~~~ 472 (500)
.+....+..+.++|+|||||+|+.++..+++++. ..++.+|.+.+ +.|+++|+|+||+.++..++|..+...
T Consensus 114 ~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~~~f~~~~~~~ri~~~v~~~N~~s~rl~erlGF~~~ge~d~~~~~~~l 191 (198)
T d1yk3a1 114 DPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMAL 191 (198)
T ss_dssp CTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEECSSCEEEE
T ss_pred CCCceEEEEEEEChhhcCCcHHHHHHHHHHHHHHhhcCCccEEEEEeCCCCHHHHHHHHHcCCEEEeEEecCCCcEEE
Confidence 2345677789999999999999999999999985 35899999988 589999999999999998887544333
|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YdaF species: Bacillus subtilis [TaxId: 1423]
Probab=99.17 E-value=2.3e-10 Score=102.76 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=93.2
Q ss_pred cccccccCCcccHHHHHHHHHHHHHc---Cc---CccCCHHHHHhhc------------CcEEEEEECCeEEEEEEEeee
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVES---GA---LVRRTDEELLKAL------------DSFYVVEREGQIIACAALFPF 399 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~---~~---~~~~s~~~~~~~l------------~~~~v~~~dg~IVG~~~l~~~ 399 (500)
..+.||+++++|.+.+.+++...... .. ..+.+.+.+.+.+ ...+++..++++||++.+...
T Consensus 9 ~~l~LR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 88 (180)
T d1nsla_ 9 EHITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNL 88 (180)
T ss_dssp SSEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHhcChHHHhhhcccCCCCccHHHHHHHHHHHHHHhhhccCcEEEEEEECCcEEEEEEeeec
Confidence 34679999999999999998532111 11 1222333332221 234566788999999998764
Q ss_pred -cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 -FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 -~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~-~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.....++| .+.|+|+|||+|+|+.++..+++++. +.++++|.+.+ .+++++|+|+||+..+..
T Consensus 89 ~~~~~~~ei-g~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~~~~k~GF~~eg~~ 157 (180)
T d1nsla_ 89 DQVNRKAEI-GYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKA 157 (180)
T ss_dssp ETTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCeEEE-EEeecccccccccchhhhhhhhhccccccCcceeecccccccHHHHHHHHHCCCEEEEEE
Confidence 34567888 48899999999999999999999995 45999999988 579999999999998643
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.14 E-value=2.2e-10 Score=111.05 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=91.1
Q ss_pred cccccccCCcccHHHHHHHHHHHHHcCcC-ccCCHHHHHhhcC-------------cEEEEEECCeEEEEEEEeeec-CC
Q 010815 338 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------------SFYVVEREGQIIACAALFPFF-KE 402 (500)
Q Consensus 338 ~~~~iR~a~~~D~~~I~~L~~~~~~~~~~-~~~s~~~~~~~l~-------------~~~v~~~dg~IVG~~~l~~~~-~~ 402 (500)
.....+..+..|.+.+.++....+..... ..++...+..... ..++.+.+|+++|++.+.... ..
T Consensus 149 ~~~~~~~~~~~d~~~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vvG~~~~~~~~~~~ 228 (308)
T d1p0ha_ 149 GVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHP 228 (308)
T ss_dssp TEEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTST
T ss_pred ceeeecccchHHHHHHHHHHHhhhhhccccccchhHHHHHHHhccccCcccccceeeecccccCCeEEEEEEEEEcCCCC
Confidence 33345667788889898887766554332 3445555444321 123346789999999887543 34
Q ss_pred CeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC----------CCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 403 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL----------GLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 403 ~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~----------g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
..++|..++|+|+|||+|||+.|+..++++++++ |+..+.+.+ +.|.+||+++||+++++.
T Consensus 229 ~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A~~lY~~~GF~~~~~~ 303 (308)
T d1p0ha_ 229 GLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 303 (308)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEeccEECHHHcCCCHHHHHHHHHHHHHHHhCCcceeeecCCccEEEEeccCCCHHHHHHHHHCCCEEeceE
Confidence 6789999999999999999999999999999887 666677766 479999999999998765
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.13 E-value=1.7e-10 Score=104.63 Aligned_cols=113 Identities=23% Similarity=0.302 Sum_probs=83.0
Q ss_pred cCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcE-EEEEECCeEEEEEEEeeec---C---CCeEEEEEEEEccCC
Q 010815 344 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-YVVEREGQIIACAALFPFF---K---EKCGEVAAIGVSPEC 416 (500)
Q Consensus 344 ~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~-~v~~~dg~IVG~~~l~~~~---~---~~~~~I~~l~V~p~y 416 (500)
.++.++.+.+..+..+.+. ..++.+.+....... +++..+++++|++.+.+.. . ...++|..++|+|+|
T Consensus 15 dld~~~~~~i~~l~~~aF~----~d~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~~v~V~p~~ 90 (181)
T d1m4ia_ 15 DLDSETRQDIRQMVTGAFA----GDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADW 90 (181)
T ss_dssp GCCHHHHHHHHHHHHHHTT----TCCCHHHHHHTCSSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGG
T ss_pred hCCHHHHHHHHHHHHHhcc----CCCCHHHHhhhcCceEEEEEeCCceeEEEEEEEEEEecCCcccceEEEEEEEEcHHH
Confidence 3445555666666555443 445666776666443 5557899999998876421 1 134689999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
||+|+|++||+.+++.+++.+ ....+.+ ..+.+||+++||+...
T Consensus 91 Rg~Gig~~Ll~~~~~~~r~~~-~~~~l~~~~~~~~fY~~~G~~~~~ 135 (181)
T d1m4ia_ 91 RGQRLVSALLDAVEQVMRGAY-QLGALSSSARARRLYASRGWLPWH 135 (181)
T ss_dssp TTSSHHHHHHHHHHHHHHHHC-SEEEEECCTTTHHHHHHTTCEECC
T ss_pred CCCHHHHHHHHHHHHHHHhcC-CEEEEecchhhHHHHHHcCCEEcC
Confidence 999999999999999998765 4555655 5689999999999864
|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA3270 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.12 E-value=4.5e-10 Score=101.47 Aligned_cols=127 Identities=13% Similarity=0.010 Sum_probs=96.7
Q ss_pred ccccccccCCcccHHHHHHHHHHHHHc--CcCccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeee-cCCCeEE
Q 010815 337 DLYEGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPF-FKEKCGE 406 (500)
Q Consensus 337 d~~~~iR~a~~~D~~~I~~L~~~~~~~--~~~~~~s~~~~~~~l-------~~~~v~~~dg~IVG~~~l~~~-~~~~~~~ 406 (500)
+..+.+|+++++|.+.+.+++...... ....+.+.+.+...+ ...+++..++++||++.+... .....++
T Consensus 7 ~~~l~Lrpl~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~i~l~~~~~~~~~~e 86 (183)
T d1yrea1 7 RGALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACE 86 (183)
T ss_dssp ETTEEEEECCGGGHHHHHHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHhCCHHHhccCCCCCCHHHHHHHHHHHhCCCceEEEEEECCEEEEEEEeeeccccCCeEE
Confidence 344689999999999999987542111 112233333332222 234677889999999998753 4567889
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~-~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|+.+.++|+|||+|+|+.++..+++++. ..|+.++.+.+ ..++++|+|+||+..+..
T Consensus 87 iG~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~eg~~ 148 (183)
T d1yrea1 87 IGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 148 (183)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEecHHHcCCccchhHHHHHhhhhhhccCcceEEeecccCCHHHHhhHhccCeEEEEEe
Confidence 9877899999999999999999999996 46999999988 578999999999998753
|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative ribosomal-protein-serine acetyltransferase VC1889 species: Vibrio cholerae [TaxId: 666]
Probab=99.08 E-value=7.2e-10 Score=99.50 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=91.8
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcC-c----CccCCHHHHHhhc-----------CcEEEEE--ECCeEEEEEEEeee-
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESG-A----LVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPF- 399 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~-~----~~~~s~~~~~~~l-----------~~~~v~~--~dg~IVG~~~l~~~- 399 (500)
.+.||+++.+|.+.+.+++.+..... + ....+.+...+.+ ..+|++. .++++||++.+...
T Consensus 11 rl~LR~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~ 90 (178)
T d2fcka1 11 RLQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFY 90 (178)
T ss_dssp SEEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred cEEEEeCCHHHHHHHHHHHcCCHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEeeeccCCceEEEEeecccc
Confidence 36799999999999999987532111 1 1223444333322 1234443 36899999998753
Q ss_pred cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 400 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 400 ~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~-~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
.....++| .+.|+|+|||+|+|+.++..+++++.+ .++++|.+.+ .+|+++|+|+||+..+..
T Consensus 91 ~~~~~~ei-g~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~eg~~ 158 (178)
T d2fcka1 91 HTFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 158 (178)
T ss_dssp GGGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCeEEE-EEeeecccccchhhhhhhheeeeeeccccCcceeeEecCCCcHHHHHHHHHCCCEEEEEE
Confidence 34578888 589999999999999999999999965 5999999988 578999999999998743
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.03 E-value=2.6e-10 Score=111.47 Aligned_cols=113 Identities=15% Similarity=0.126 Sum_probs=89.0
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc---CcEEEE-EECCeEEEEEEEeeecCCCeEEEEEEEEccC
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVSPE 415 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l---~~~~v~-~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~ 415 (500)
..+|+++.+|.+.+.+++ . +..+.+.+.+...+ ..+.++ .++|++||++... ..++|+.++|+|+
T Consensus 168 ~~lr~l~~~da~~i~~~W----~--~~~~~s~~~i~~~i~~~~~~gl~~~e~G~lv~w~~~~-----~~g~l~~l~V~p~ 236 (297)
T d1sqha_ 168 FEIRRLRAEDAAMVHDSW----P--NKGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPK 236 (297)
T ss_dssp EEEECCCGGGHHHHHHTC----T--TCSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGG
T ss_pred CEeecCCHHHHHHHHHhc----C--CCCcchHHHHHHHHhhCCeEEEEECCCCCEEEEEEEC-----CCEEEEEEEEChH
Confidence 479999999999888763 2 22344555554443 344454 4468999998665 3467899999999
Q ss_pred CcCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEecee
Q 010815 416 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 416 yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~~~~ 463 (500)
|||+|+|+.|+.++++++++.|+..+++.+ ..|++||+|+||+.++..
T Consensus 237 ~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~~ 288 (297)
T d1sqha_ 237 AERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN 288 (297)
T ss_dssp GCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred hcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999999998888877 579999999999998754
|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltranferase Atu2435 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.00 E-value=2.5e-09 Score=93.44 Aligned_cols=126 Identities=11% Similarity=0.012 Sum_probs=94.3
Q ss_pred ccccccCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-----------CcEEEEE--ECCeEEEEEEEeeecCCCeE
Q 010815 339 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKCG 405 (500)
Q Consensus 339 ~~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-----------~~~~v~~--~dg~IVG~~~l~~~~~~~~~ 405 (500)
-..||+++.+|++.+.+++.+.....+..+.+.+...++. ..++++. .++.++|++.+.........
T Consensus 9 RL~LRp~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ig~~~~~~~~~~~~~ 88 (164)
T d2fsra1 9 RLTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEK 88 (164)
T ss_dssp SEEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSC
T ss_pred cEEEecCCHHHHHHHHHHHcChhhhhcCCCCCcHHHHHHHHHHHHHHhhcCcceEEEEEcCCCeEEEEEEeeccCccccc
Confidence 3579999999999999998765443344344433322221 2344443 35889999998754444455
Q ss_pred EEEEEEEccCCcCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHhCCCeEeceecc
Q 010815 406 EVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 465 (500)
Q Consensus 406 ~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~-~~g~~~I~l~~----~~a~~fYek~GF~~~~~~~l 465 (500)
++ .+.+.|+|+++|+|..++..++.++. ..++++|.+.+ .+++++|+|+||+..+...-
T Consensus 89 ~~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF~~eg~~~~ 152 (164)
T d2fsra1 89 EL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPR 152 (164)
T ss_dssp EE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSCC
T ss_pred eE-eeEeeeeeccccccccceeEEEeeccccccceeEEEEECcCCHHHHHHHHHCCCEEeeeEcc
Confidence 55 68999999999999999999999886 46999999988 57999999999999876543
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.98 E-value=8.3e-10 Score=90.51 Aligned_cols=76 Identities=22% Similarity=0.285 Sum_probs=67.3
Q ss_pred cCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhC
Q 010815 378 LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 455 (500)
Q Consensus 378 l~~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~ 455 (500)
-+.+|+.+++|+++|++.+.+. +++.++|..++|.|+|||+|+|++|+..++++|++.|.+ |...++-+..||+|+
T Consensus 10 ~~~f~v~~~~g~~vg~~~~~~~-~~~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~k-vvp~c~y~~~~~~k~ 85 (102)
T d1r57a_ 10 ENKFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLK-IIASCSFAKHMLEKE 85 (102)
T ss_dssp TTEEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCE-EEESSHHHHHHHHHC
T ss_pred CCEEEEEEeCCceEEEEEEEEc-CCCEEEEEEEEEChHHCCccHHHHHHHHHHHHHHHCCCE-EEEecHhHHHHHHhC
Confidence 3578999999999999998854 467899999999999999999999999999999999975 667777889999985
|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.87 E-value=3.8e-08 Score=95.95 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=83.0
Q ss_pred hhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEeeeC-HHHHHHHHhCCCcEEEcCc-ccCCCCCeeec-
Q 010815 85 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNL-GYSSSGEVLNC- 161 (500)
Q Consensus 85 ~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~~vd-~~~I~~lL~~g~IPVi~~~-~~~~~g~~~~i- 161 (500)
.|++.|++ +..+...+-.+++... ++.. .+.... .+.|..+++.+.|||+++. +.+++|+...+
T Consensus 139 ~L~~~Gi~----a~~ld~~~~~i~t~~~--------~~~a-~~~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLg 205 (302)
T d2hmfa1 139 AIRDLGEK----SIALEGGEAGIITDNN--------FGSA-RVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLG 205 (302)
T ss_dssp HHHHTTCC----EEEECTTTTTEEECSC--------TTSC-CEEEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECC
T ss_pred HHHHcCCc----eEEeeccccccccCCc--------cchh-hhhhhhhHHHHHHHHhcCCeEEeecccccCCCCCEEEEe
Confidence 57888887 5555444433333211 1111 122333 4568888999999999985 77788888776
Q ss_pred --CHHHHHHHHHHHcCCCEEEEEecCccc---C----CCCccccccCHHHHHHHHHhh
Q 010815 162 --NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 210 (500)
Q Consensus 162 --~~D~~a~~lA~~l~Ad~li~lTdv~gv---~----~~g~~I~~i~~~e~~~~~~~~ 210 (500)
.+|..|+.+|..|+|+.+.+.|||+|+ | ++.+.|+.++.+|+.++...|
T Consensus 206 RgGSD~tA~~la~~l~A~~~~i~tdv~gi~~~dP~~~~~a~~~~~~~y~ea~eLa~~g 263 (302)
T d2hmfa1 206 RGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFG 263 (302)
T ss_dssp TTTHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTT
T ss_pred ccCcccHHHHHHHHhccHHHHHHhccchhccchhhcCCCceEecccCHHHHHHHHhCC
Confidence 489999999999999999999999998 3 357899999999999986543
|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.61 E-value=3.9e-07 Score=88.67 Aligned_cols=134 Identities=15% Similarity=0.150 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhCCCCCchhhhhcCCCCCccccceeeccccEEEEEEcCccCCcccceeeeEe-----ee
Q 010815 56 SESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK-----KV 130 (500)
Q Consensus 56 ~~~l~~~~~~~~~i~~~i~~~l~~~~~~~~l~~~Gi~~~~~a~~l~~~d~~~~~~~~~~~~~~~d~g~~G~v~-----~v 130 (500)
....+.+...-..++..|.+. .|++.|++ +..+...+-.+++... ++ .+.+. ..
T Consensus 113 ~~~~D~ils~GE~lSa~ll~~--------~L~~~gi~----a~~~d~~~~~iit~~~--------~~-~a~~~~~~~~~~ 171 (304)
T d2cdqa1 113 LRTRDYLVSFGECLSTRIFAA--------YLNTIGVK----ARQYDAFEIGFITTDD--------FT-NGDILEATYPAV 171 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEECGGGTTCEECSC--------ST-TCCBCTTHHHHH
T ss_pred hhhHHHHHHhHHHHHHHHHHH--------HHHHcCCc----eEEEeecccccccccc--------cc-cccccccchhhh
Confidence 344455555566666666665 68899988 5555555544444211 11 11121 12
Q ss_pred CHHHHHHHHhCCCcEEEcCc-ccC-CCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc---CC----CCcccccc
Q 010815 131 DVTRMRERLDGGCLVILSNL-GYS-SSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---DE----SGHLIRFL 198 (500)
Q Consensus 131 d~~~I~~lL~~g~IPVi~~~-~~~-~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv---~~----~g~~I~~i 198 (500)
....+..+++.+.|||+++. +.+ ++|+...+. +|..|+.+|..|+|+.+.+.|||||+ || +.++|+++
T Consensus 172 ~~~~~~~~~~~~~v~vv~Gfig~~~~~G~~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~v~~a~~i~~l 251 (304)
T d2cdqa1 172 AKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYL 251 (304)
T ss_dssp HHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEE
T ss_pred HHHHhhhhhccCcEEEeeccccccCcCCceeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccccCCceEcCcc
Confidence 23456677899999999885 555 578887764 79999999999999999999999998 44 58999999
Q ss_pred CHHHHHHHHHhh
Q 010815 199 TLQEADSLIRQR 210 (500)
Q Consensus 199 ~~~e~~~~~~~~ 210 (500)
+.+|+.++..-|
T Consensus 252 sy~EA~ela~~G 263 (304)
T d2cdqa1 252 TFDEAAELAYFG 263 (304)
T ss_dssp EHHHHHHHHHHH
T ss_pred CHHHHHHHHhCC
Confidence 999999986543
|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=5.1e-07 Score=87.34 Aligned_cols=75 Identities=24% Similarity=0.284 Sum_probs=61.4
Q ss_pred HHHHHhCCCcEEEcC-cccCCCCCeeecC---HHHHHHHHHHHcCCCEEEEEecCccc---CC----CCccccccCHHHH
Q 010815 135 MRERLDGGCLVILSN-LGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---DE----SGHLIRFLTLQEA 203 (500)
Q Consensus 135 I~~lL~~g~IPVi~~-~~~~~~g~~~~i~---~D~~a~~lA~~l~Ad~li~lTdv~gv---~~----~g~~I~~i~~~e~ 203 (500)
+...++.+ |||+++ ++.+++|+...+. +|..|+.+|..|+|+.+.+-|||||+ || +.++|++++.+|+
T Consensus 168 ~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~EA 246 (292)
T d2j0wa1 168 LLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEA 246 (292)
T ss_dssp THHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHH
T ss_pred hhhhhccc-ccccccccccccCCceEeeccCcccHHHHHHHHHhhcHHHHHhccCcceeechhhcCCCceEcceeCHHHH
Confidence 33444555 788877 5777889888774 79999999999999999999999998 43 5899999999999
Q ss_pred HHHHHhh
Q 010815 204 DSLIRQR 210 (500)
Q Consensus 204 ~~~~~~~ 210 (500)
.++..-|
T Consensus 247 ~ela~~G 253 (292)
T d2j0wa1 247 AEMATFG 253 (292)
T ss_dssp HHHHHTT
T ss_pred HHHHhCC
Confidence 9986443
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.43 E-value=1.4e-07 Score=90.73 Aligned_cols=121 Identities=14% Similarity=0.087 Sum_probs=85.2
Q ss_pred ccc-cCCcccHHHHHHHHHHHHHcCcCccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEc
Q 010815 341 GTR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 413 (500)
Q Consensus 341 ~iR-~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~------~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~ 413 (500)
+.| .++++|.+.+.+|+.......-..+...+.+....+ .+++...+|+++|++.+.+.. +....+..++|+
T Consensus 3 ~~r~~l~~~d~~~v~~l~~~~~~~d~~~p~~e~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~-~~~~~~~~~~V~ 81 (308)
T d1p0ha_ 3 DWRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPR-GAGGAMAELVVH 81 (308)
T ss_dssp CCBSCCCHHHHHHHHHHHHHHHHHHSSCSSCHHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCCccHHHHHhhhccCCCceEEEEEecCCEEEEEEEEEecC-CCceeEEEEEEC
Confidence 455 588999999999987655432223444444433221 133446789999999987543 334566689999
Q ss_pred cCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHhCCCeEece
Q 010815 414 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 462 (500)
Q Consensus 414 p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~fYek~GF~~~~~ 462 (500)
|+|||+|||+.|++++++++++.+...+......+..+|.++||.....
T Consensus 82 P~~R~~GiG~~Ll~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 130 (308)
T d1p0ha_ 82 PQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRE 130 (308)
T ss_dssp GGGCSSSHHHHHHHHHHHHTTTCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCCHHHHHHHHHHHHHhhhccceecccchhhHHHHHhcccccccc
Confidence 9999999999999999998877765444333367889999999998754
|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Autoinducer synthesis protein LasI species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.27 E-value=5.9e-06 Score=74.90 Aligned_cols=117 Identities=9% Similarity=0.125 Sum_probs=85.8
Q ss_pred cCCcccHHHHHHHHHHHHHcCcC--ccC----CHHHHHhhcCcEEEEEECCeEEEEEEEeeec-----------------
Q 010815 344 TAKVTDLSGIKQIIQPLVESGAL--VRR----TDEELLKALDSFYVVEREGQIIACAALFPFF----------------- 400 (500)
Q Consensus 344 ~a~~~D~~~I~~L~~~~~~~~~~--~~~----s~~~~~~~l~~~~v~~~dg~IVG~~~l~~~~----------------- 400 (500)
..+.++++.++++..+.+-.+.. .+. ..+.++..-..+++...+++++|++.+.+..
T Consensus 13 ~~~~~~l~~~~rlR~~VFv~E~gw~~~~~~g~E~D~~D~~~~~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~ 92 (197)
T d1ro5a_ 13 EFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKE 92 (197)
T ss_dssp GSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCC
T ss_pred hCCHHHHHHHHHHHHHHHHhhhCCCCCCCcccccccCCCcccEEEEeccccceEEEEEeecCCCCCcccccchhhhcCcc
Confidence 34556678888888777655432 111 1122333223466677889999999986421
Q ss_pred ---CCCeEEEEEEEEccCCcCC----cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEe
Q 010815 401 ---KEKCGEVAAIGVSPECRGQ----GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 460 (500)
Q Consensus 401 ---~~~~~~I~~l~V~p~yRG~----GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~ 460 (500)
....+++..++|+|++|++ .++..|+..+.+++.++|++.++..+ ....++|+++||...
T Consensus 93 ~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~~~a~~~G~~~~~~~~~~~~~r~~~r~G~~~~ 160 (197)
T d1ro5a_ 93 APCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVS 160 (197)
T ss_dssp CCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEEE
T ss_pred ccCCCceEEEEEEEEccccccccchhHHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCcEE
Confidence 2357899999999999655 48899999999999999999998888 678999999999654
|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Acyl-homoserinelactone synthase EsaI species: Pantoea stewartii subsp. stewartii [TaxId: 66271]
Probab=97.65 E-value=1.5e-05 Score=73.01 Aligned_cols=80 Identities=10% Similarity=0.066 Sum_probs=66.7
Q ss_pred cEEEEEECCeEEEEEEEeeec------------------CCCeEEEEEEEEccCCcCC------cHHHHHHHHHHHHHHH
Q 010815 380 SFYVVEREGQIIACAALFPFF------------------KEKCGEVAAIGVSPECRGQ------GQGDKLLDYIEKKAAS 435 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~------------------~~~~~~I~~l~V~p~yRG~------GiG~~Ll~~l~~~a~~ 435 (500)
.+++...+|+++||+.+.+.. ....+++..++|+|++|+. .+...|+..+.+++.+
T Consensus 53 ~~lv~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~~~~~a~~ 132 (210)
T d1kzfa_ 53 RYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLAMVNWAQN 132 (210)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHHHHHHHHHHH
Confidence 466677899999999996421 1246899999999999865 3788999999999999
Q ss_pred CCCCEEEEEc-HHHHHHHHhCCCeE
Q 010815 436 LGLDMLFLLT-TRTADWFKSRGFRE 459 (500)
Q Consensus 436 ~g~~~I~l~~-~~a~~fYek~GF~~ 459 (500)
.|+..++..+ ....++|+++||..
T Consensus 133 ~Gi~~~~~v~~~~~~r~~~r~G~~~ 157 (210)
T d1kzfa_ 133 NAYGNIYTIVSRAMLKILTRSGWQI 157 (210)
T ss_dssp TTCSEEEEEEEHHHHHHHHHHCCCC
T ss_pred CCCCEEEEEeCHHHHHHHHHCCCCe
Confidence 9999998888 56799999999954
|
| >d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: AstA-like domain: Arginine N-succinyltransferase, alpha chain, AstA species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.48 E-value=0.0003 Score=67.63 Aligned_cols=124 Identities=12% Similarity=0.101 Sum_probs=83.7
Q ss_pred cccccCCcccHHHHHHHHHHHHHcCcCccCCHHH-----------HHhhc------CcEEEEEE--CCeEEEEEEEeee-
Q 010815 340 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-----------LLKAL------DSFYVVER--EGQIIACAALFPF- 399 (500)
Q Consensus 340 ~~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~~-----------~~~~l------~~~~v~~~--dg~IVG~~~l~~~- 399 (500)
+.+|+++..|++++++|-+..-..--..+.+.+. +.... ..++|+++ .|+|+|++.+...
T Consensus 2 lviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~~g~vvGts~I~a~v 81 (338)
T d1ylea1 2 LVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 81 (338)
T ss_dssp EEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred eEEEeCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhccCCCCCCccEEEEEEeCCCCeEEEEEeEEEee
Confidence 4689999999999999965432211123334333 33322 14677786 5899999988410
Q ss_pred ----------------------------------cCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHH---HCCCCEEE
Q 010815 400 ----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLF 442 (500)
Q Consensus 400 ----------------------------------~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~---~~g~~~I~ 442 (500)
.-.+..+|+.++++|+||+.|.|+.|-..-.-.+. ++--++|.
T Consensus 82 G~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~L~~d~tg~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~vi 161 (338)
T d1ylea1 82 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAVV 161 (338)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEEE
T ss_pred cCCCCcEEEEeCceeecccccCCccccceEEEeccCCCCeeEEEEEECHHHcCCcchhHHHHHHHHHHHHhHHhhhhhhh
Confidence 11256789999999999999999988766554443 34567788
Q ss_pred EEc------HHHHHHHHhCCCeEecee
Q 010815 443 LLT------TRTADWFKSRGFRECSIE 463 (500)
Q Consensus 443 l~~------~~a~~fYek~GF~~~~~~ 463 (500)
++- ...-+||+.+|=...+-.
T Consensus 162 AEmRG~~D~~G~SPFWd~lg~hFF~md 188 (338)
T d1ylea1 162 VEIVGYSDEQGESPFWNAVGRNFFDLN 188 (338)
T ss_dssp EECCBCCCTTCCCHHHHHTGGGTSCCC
T ss_pred hhccCCcCCCCCCchHHHhhCcccCCC
Confidence 876 345789999886655433
|
| >d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein AT1g77540 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.34 E-value=0.00035 Score=55.27 Aligned_cols=63 Identities=16% Similarity=0.061 Sum_probs=48.6
Q ss_pred EEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHH-HHHhC
Q 010815 392 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR 455 (500)
Q Consensus 392 G~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~~~a~~-fYek~ 455 (500)
|++.+.....+....|....|.|++||||+|+.|++.++++|++.|. +|.-.|+-+.+ |.+|+
T Consensus 20 a~~~y~~~~~~~~i~i~HT~V~~~~rGqGia~~Lv~~al~~ar~~g~-kV~P~Cpyv~~~~~~kh 83 (95)
T d1xmta_ 20 AFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSI-SIIPSCSYVSDTFLPRN 83 (95)
T ss_dssp SEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTC-EEEECSHHHHHTHHHHC
T ss_pred EEEEEEEeCCCcEEEEEEEEeCcccCCChHHHHHHHHHHHHHHHCCC-EEEEeCHHHHHHHHHhC
Confidence 34444323445677899999999999999999999999999999985 67777765554 66664
|
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=96.33 E-value=0.0073 Score=52.64 Aligned_cols=79 Identities=13% Similarity=-0.082 Sum_probs=59.2
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----------HHH
Q 010815 380 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----------TRT 448 (500)
Q Consensus 380 ~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I~l~~-----------~~a 448 (500)
.++++..++++||++.+... +..++....+.++++|..+.+..|+-+++++|.++|++...+.- ...
T Consensus 72 ~l~~a~~~~~~ia~~l~~~~--~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~Gl 149 (182)
T d1lrza3 72 LVPLAYINELPISAGFFFIN--PFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGV 149 (182)
T ss_dssp ECEEEEEEEEEEEEEEEEEC--SSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHH
T ss_pred eeeeeecCCccEEEEEEEee--chhheeeeceeccchhhcCchHHHHHHHHHHHHHcCCcEEEecCcCCCCCCCcccchH
Confidence 35666788899997777633 34555557899999999999999999999999999999887742 123
Q ss_pred HHHHHhCCCeEe
Q 010815 449 ADWFKSRGFREC 460 (500)
Q Consensus 449 ~~fYek~GF~~~ 460 (500)
.+|=+++|=+.+
T Consensus 150 ~~FK~~fg~~~v 161 (182)
T d1lrza3 150 VKFKKGYNAEII 161 (182)
T ss_dssp HHHHHTTTCEEE
T ss_pred HHHHHhcCCcee
Confidence 455555666654
|
| >d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.84 E-value=0.016 Score=48.38 Aligned_cols=95 Identities=17% Similarity=0.103 Sum_probs=65.5
Q ss_pred cccHHHHHHHHHHHHHc----CcCccCCHHHHHhhcC------c--EEE-EEECCeEEEEEEEeeec------CCCeEEE
Q 010815 347 VTDLSGIKQIIQPLVES----GALVRRTDEELLKALD------S--FYV-VEREGQIIACAALFPFF------KEKCGEV 407 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~----~~~~~~s~~~~~~~l~------~--~~v-~~~dg~IVG~~~l~~~~------~~~~~~I 407 (500)
+.+++++++|+.+..-+ .|....+.+-+...+. . +-+ ...++++||++.-.|.. .-...+|
T Consensus 12 ~~~~~el~~lL~~nYVeddd~~frf~Ys~efl~Wal~~Pg~~~~w~igvr~~~~~kLVgfIs~~P~~i~i~~~~~~~~~I 91 (141)
T d1rxta1 12 RGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEI 91 (141)
T ss_dssp HHHHHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSSCCCCEEC
T ss_pred HHHHHHHHHHHHHhcccCCCceEEEEeCHHHcEEEecCCCCCcCcEEEEEEccCCeEEEEEeceEEEEEEeCCEeEEEEE
Confidence 34556666665543211 1224456666655542 1 222 24579999999887631 1256899
Q ss_pred EEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 010815 408 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441 (500)
Q Consensus 408 ~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I 441 (500)
..++|++++|.+|++-.|++++.+.+...|+.+.
T Consensus 92 nFLCVhKklR~k~lAPvLI~EitRr~n~~gI~qa 125 (141)
T d1rxta1 92 NFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQA 125 (141)
T ss_dssp CCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCCE
T ss_pred EEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence 9999999999999999999999999988888764
|
| >d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=94.63 E-value=0.046 Score=46.61 Aligned_cols=96 Identities=15% Similarity=0.147 Sum_probs=66.4
Q ss_pred CcccHHHHHHHHHHHHHc----CcCccCCHHHHHhhcC------cEE-EE--EECCeEEEEEEEeee----cC-C---Ce
Q 010815 346 KVTDLSGIKQIIQPLVES----GALVRRTDEELLKALD------SFY-VV--EREGQIIACAALFPF----FK-E---KC 404 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~~----~~~~~~s~~~~~~~l~------~~~-v~--~~dg~IVG~~~l~~~----~~-~---~~ 404 (500)
++.+++.+++|+.+..-+ .|....+.+-+...+. .+. .+ ..++++||++.-.+. .. + ..
T Consensus 33 d~~~l~ely~lL~~nYVeDdd~~frf~YS~efL~WaL~~Pg~~~~w~vgvR~~~~~kLvgfIs~~P~~i~i~~~~~~~~~ 112 (165)
T d1iyka1 33 DNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDS 112 (165)
T ss_dssp SHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTTTEEEEE
T ss_pred CHHHHHHHHHHHHhhcccCccceEEEecCHHHhhhhhcCCCCCccceEEEEEccCCcEEEEEecceEEEEEecCCcEEEE
Confidence 344566666666554322 2234456666666552 222 22 346899999987652 11 2 45
Q ss_pred EEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 010815 405 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441 (500)
Q Consensus 405 ~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I 441 (500)
.+|..++|++++|.+|++-.|++.+.+.+...|+.+.
T Consensus 113 ~~INFLCVhKklR~KrlAPvLI~EitRr~n~~gI~qA 149 (165)
T d1iyka1 113 VEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQA 149 (165)
T ss_dssp EEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEEE
Confidence 7999999999999999999999999999998898764
|
| >d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.42 E-value=0.061 Score=46.98 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=63.5
Q ss_pred CcccHHHHHHHHHHHHHc----CcCccCCHHHHHhhcC------c-EEEEE--ECCeEEEEEEEeeec----C--CCeEE
Q 010815 346 KVTDLSGIKQIIQPLVES----GALVRRTDEELLKALD------S-FYVVE--REGQIIACAALFPFF----K--EKCGE 406 (500)
Q Consensus 346 ~~~D~~~I~~L~~~~~~~----~~~~~~s~~~~~~~l~------~-~~v~~--~dg~IVG~~~l~~~~----~--~~~~~ 406 (500)
++.+++.++.++....-+ .+....+.+.+...+. . .+.+. .++++||++.-.+.. + -...+
T Consensus 55 d~~~l~el~~lL~~nYved~d~~frf~Ys~~~l~w~l~~Pg~~~~~~igvr~~~~~KLvg~Is~~P~~i~i~~~~~~~~~ 134 (185)
T d1iica1 55 NKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVE 134 (185)
T ss_dssp CHHHHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccceEEeecCHHHheeeecCCCCCcCCEEEEEEccCCcEEEEEeeeEEEEEEcCeEEEEEE
Confidence 344455566665543221 1223345555554442 2 23332 368999999876531 1 14678
Q ss_pred EEEEEEccCCcCCcHHHHHHHHHHHHHHHCCCCEE
Q 010815 407 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 441 (500)
Q Consensus 407 I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~~~I 441 (500)
|..+||++++|.+|++-.|++.+.+.+...|+.+-
T Consensus 135 VnFLCVhkk~R~K~lAPvLI~EitRr~n~~~i~qa 169 (185)
T d1iica1 135 INFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHA 169 (185)
T ss_dssp EEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEEEchhHhhcCCcHHHHHHHHHHhcccCeEEE
Confidence 99999999999999999999999999998888654
|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HAT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.94 E-value=0.088 Score=49.81 Aligned_cols=58 Identities=12% Similarity=0.248 Sum_probs=45.1
Q ss_pred CeEEEEEEEeeec-------------CCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHC-CCCEEEEEc
Q 010815 388 GQIIACAALFPFF-------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT 445 (500)
Q Consensus 388 g~IVG~~~l~~~~-------------~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~-g~~~I~l~~ 445 (500)
..++|++..+.++ +.....|.++.|.|.|||+|+|+.|++.+-+.+.+. ++..|+++-
T Consensus 180 ~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RISQ~LILPPyQ~kG~G~~L~~~iy~~~~~d~~v~eiTVED 251 (315)
T d1boba_ 180 KELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED 251 (315)
T ss_dssp CCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred CcccceeeeeeeeeccccccccccccccccceeEEEEEeCccccCCchHHHHHHHHHHHhcCCCeeeccccC
Confidence 5799999987542 223467999999999999999999999998888763 555555543
|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=93.08 E-value=0.65 Score=38.90 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHHHHcCcCccCCHHHHHhhc-----C--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEccCCcCC
Q 010815 347 VTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----D--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 419 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l-----~--~~~v~~~dg~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~ 419 (500)
.+|++.+.+++.+.....-..+.+.+.+..-+ + .++++..+|++++.+.+.... +.++....+.. ++...
T Consensus 25 ~e~~~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~~~~~~~l~~~~~~g~~va~~l~~~~~--~~~~y~~~a~~-~~~~~ 101 (171)
T d1ne9a2 25 ATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKYG--RKIWYMYAGSM-DGNTY 101 (171)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEET--TEEEEEEEEEC-SSCCT
T ss_pred HHHHHHHHHHHHHHhccccCCCCCHHHHHHHHHhcCCCeEEEEEEEeCCeEEEEEEEEEEC--CEEEEEEcccc-ccccc
Confidence 35677777777664443322234444443322 1 356677889999977766333 33443334444 45556
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEE
Q 010815 420 GQGDKLLDYIEKKAASLGLDMLFLL 444 (500)
Q Consensus 420 GiG~~Ll~~l~~~a~~~g~~~I~l~ 444 (500)
.-+..|+-+++++++++|++...+.
T Consensus 102 ~~~~~L~~~~i~~~~~~G~~~~D~g 126 (171)
T d1ne9a2 102 YAPYAVQSEMIQWALDTNTDLYDLG 126 (171)
T ss_dssp THHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEeC
Confidence 6678888889999999999998775
|
| >d2d4pa1 d.108.1.1 (A:1-130) Hypothetical protein TTHA1254 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein TTHA1254 species: Thermus thermophilus [TaxId: 274]
Probab=92.67 E-value=0.68 Score=36.45 Aligned_cols=109 Identities=17% Similarity=0.143 Sum_probs=81.6
Q ss_pred ccccCCcccHHHHHHHHHHHHHcCcCccCCHH--HHHhhcCcEEEEEECCeEEEEEEEeeecCCCeE--EEEEEEEccCC
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDE--ELLKALDSFYVVEREGQIIACAALFPFFKEKCG--EVAAIGVSPEC 416 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~~~~~~s~~--~~~~~l~~~~v~~~dg~IVG~~~l~~~~~~~~~--~I~~l~V~p~y 416 (500)
.+|+.++.|++.+..+- .. .+.+.. .+.+...+.|++++++++.|++.-...|..... .+..+ +-
T Consensus 2 r~r~f~e~d~d~L~~~~-----g~--~~~sl~alrfyeRsgHsF~Aed~e~~~Gf~lAQavWqGdrptVl~~r~----~~ 70 (130)
T d2d4pa1 2 RFRPFTEEDLDRLNRLA-----GK--RPVSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRI----EG 70 (130)
T ss_dssp EEECCCGGGHHHHHHTS-----TT--SCCCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEE----EE
T ss_pred cccccCchhHHHHHHHh-----cc--CCCCHHHhhhhhhcCcceeeecCCceeeEeeehhhhcCCCceEEEEec----CC
Confidence 58999999999997661 11 234444 445556788999999999999988776654433 44333 55
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHhCCCeEe
Q 010815 417 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 460 (500)
Q Consensus 417 RG~GiG~~Ll~~l~~~a~~~g~~~I~l~~----~~a~~fYek~GF~~~ 460 (500)
+..+....|++.+.+.|-.-++-.+.+.. +.+..+-+..||..-
T Consensus 71 ~~ee~~~gLL~AvvKSAYDaaVYev~~~ldpa~~a~~~a~ea~~~~~g 118 (130)
T d2d4pa1 71 RSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALG 118 (130)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCC
T ss_pred CcHHHHHHHHHHHHHHhhcceeeEEeeccCHHHHHHHHHHHhhccccC
Confidence 67788888999999999998998888877 357888888998764
|
| >d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.59 E-value=1.1 Score=39.85 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=83.4
Q ss_pred ccccCCcccHHHHHHHHHHHHHcC-cCccCCHHHHHhhcC------------cEEEEEE-CCeEEEEEEEeeecC-----
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------------SFYVVER-EGQIIACAALFPFFK----- 401 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~s~~~~~~~l~------------~~~v~~~-dg~IVG~~~l~~~~~----- 401 (500)
.+|+++++|++++.+|++++...- +....+.+++.+|+- ..||+++ +++|..++++...+.
T Consensus 42 glR~M~~kDv~~V~~LL~~yl~~f~l~~~Ft~eev~Hwflp~~~~~~~~~VI~sYVve~~~g~ITDF~SFY~Lpstvi~~ 121 (237)
T d1iica2 42 GLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNN 121 (237)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSC
T ss_pred ccccCchhhHHHHHHHHHHHHHhCcceEecCHHHhhheeccccCCCCCCcEEEEEEEECCCCcEeeEEEEEecchhhhCC
Confidence 489999999999999999876542 235568999999871 1466665 788998888864321
Q ss_pred C-----CeEEEEEEEEccCCcCC------------cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 402 E-----KCGEVAAIGVSPECRGQ------------GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 402 ~-----~~~~I~~l~V~p~yRG~------------GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
. ..+++-..+.+-+++-. .-=..|+..++-.|++.|+.-..+.. -....|.+++.|-.-+
T Consensus 122 ~kh~~l~aAY~fYy~~~~~~~~~~~~~~~~~~a~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 199 (237)
T d1iica2 122 TKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGD 199 (237)
T ss_dssp SSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred CCcceEEEEEEEEEeeccccccccccchhhhhhhcchHHHHHHHHHHHHHHcCCcEEEeccccccHHHHHHcCCccCC
Confidence 1 34566455555444321 22345677777778999988766666 3446799999999865
|
| >d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable histone acetyltransferase MYST1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.00 E-value=0.28 Score=44.83 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=39.4
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 389 ~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
++||+-.-... +.....+.|+.|.|.||++|+|+-|++..=+.++..|.
T Consensus 121 h~vGYFSKEk~-s~~~~NLsCIltlP~yQrkGyG~lLI~fSYeLSr~E~~ 169 (271)
T d2giva1 121 HIVGYFSKEKE-SPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLEST 169 (271)
T ss_dssp EEEEEEEEESS-CTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeeeeEec-cCCCceeeeeeccCHHHhcCHhHhHHhhhhhhhhccCC
Confidence 58887766632 22347789999999999999999999998888887764
|
| >d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=89.09 E-value=0.81 Score=40.58 Aligned_cols=120 Identities=18% Similarity=0.171 Sum_probs=82.9
Q ss_pred ccccCCcccHHHHHHHHHHHHHcC-cCccCCHHHHHhhc--C---------cEEEEE-ECCeEEEEEEEeeecC-----C
Q 010815 341 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL--D---------SFYVVE-REGQIIACAALFPFFK-----E 402 (500)
Q Consensus 341 ~iR~a~~~D~~~I~~L~~~~~~~~-~~~~~s~~~~~~~l--~---------~~~v~~-~dg~IVG~~~l~~~~~-----~ 402 (500)
.+|+++++|++++.+|+++....- +....+.+++.+|+ . ..||++ ++++|-.++++...+. .
T Consensus 42 glR~M~~kDv~~V~~LL~~yl~~f~l~~~F~~eev~Hwflp~~~~~~~~Vi~sYVve~~~g~ItDF~SFY~Lpstvi~~~ 121 (227)
T d1iyka2 42 GLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNA 121 (227)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSCS
T ss_pred CcccCchhhHHHHHHHHHHHHHcCcceEecCHHHHHHhhcCccccCCCCeEEEEEEECCCCcEeEEEEEeeccHHhhCCC
Confidence 499999999999999999876542 23556899999987 1 156666 4789999998864321 1
Q ss_pred -----CeEEEEEEEEccCCcCC---cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHhCCCeEec
Q 010815 403 -----KCGEVAAIGVSPECRGQ---GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 461 (500)
Q Consensus 403 -----~~~~I~~l~V~p~yRG~---GiG~~Ll~~l~~~a~~~g~~~I~l~~-~~a~~fYek~GF~~~~ 461 (500)
..+++ .+++.-.+-.. .-=..|+..++-.|++.|+.-..+.. -....|.+++.|-.-+
T Consensus 122 ~h~~l~aAY~-fY~~~~~~~~~~~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 188 (227)
T d1iyka2 122 QHDELGIAYL-FYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGD 188 (227)
T ss_dssp SCSEECEEEE-EEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred ccceEEEEEE-EEEEeecccchhhhhhHHHHHHHHHHHHHHcCCcEEEcccccccHHHHHHcCCccCC
Confidence 34555 34444333222 22445788888889999988766655 3446799999999865
|
| >d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase MYST3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.54 E-value=0.56 Score=42.75 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=39.1
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 389 ~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
+++|+-.-... +.....+.|+.|.|.||++|+|+.|++..=+.++..|.
T Consensus 121 h~vGyFSKEk~-s~~~~NLsCIltLP~~QrkGyG~lLI~fSYeLSr~Eg~ 169 (270)
T d2ozua1 121 HLVGYFSKEKH-CQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQ 169 (270)
T ss_dssp EEEEEEEEESS-CTTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred EEEeecceecc-cccCceeeeeeccchhhhcchhHHHHHHhhhhhhccCC
Confidence 58887665532 22346799999999999999999999999988887764
|
| >d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase ESA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.43 E-value=0.61 Score=42.60 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=38.6
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEEccCCcCCcHHHHHHHHHHHHHHHCCC
Q 010815 389 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 438 (500)
Q Consensus 389 ~IVG~~~l~~~~~~~~~~I~~l~V~p~yRG~GiG~~Ll~~l~~~a~~~g~ 438 (500)
+++|+-.-... ......+.|+.|.|.||++|+|+.|++..=+.++..|.
T Consensus 124 h~vGyFSKEk~-s~~~nNLaCIltLP~~QrkGyG~~LI~fSYeLSr~E~~ 172 (273)
T d1fy7a_ 124 HLVGYFSKEKE-SADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 172 (273)
T ss_dssp EEEEEEEEESS-CTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eeeeecceecc-ccCCceeEEEEecChHHhcchhhhHHHHHHHHhhhccc
Confidence 57887555422 22346799999999999999999999999998887754
|
| >d1ne9a1 d.108.1.4 (A:1-164) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=80.32 E-value=2.5 Score=35.35 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=65.9
Q ss_pred cccHHHHHHHHHHHHHcCcCccCCHHHHHhhcCcE-EEEEE-CCeEEEEEEEeeecCCCeEEEEEEEEcc----CCcCCc
Q 010815 347 VTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-YVVER-EGQIIACAALFPFFKEKCGEVAAIGVSP----ECRGQG 420 (500)
Q Consensus 347 ~~D~~~I~~L~~~~~~~~~~~~~s~~~~~~~l~~~-~v~~~-dg~IVG~~~l~~~~~~~~~~I~~l~V~p----~yRG~G 420 (500)
.+..+.+.++.......++...+.+..+.+..... +.+.+ +|+++|.+.+....-..... .+++.. +|...-
T Consensus 8 ~~~~ee~d~fv~~~p~g~~lQs~~w~~~K~gw~~~~v~~~~~~g~~va~a~vl~~~~~~g~~--~~y~prGPv~d~~d~~ 85 (164)
T d1ne9a1 8 PQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKK--FAYASKGPVMDVTDVD 85 (164)
T ss_dssp HHHHHHHHHHHHHCTTCCGGGSTHHHHHTTTSEEEEEEEECTTSCEEEEEEEEEECCSSSSE--EEEETTCCBSCTTCHH
T ss_pred cchHHHHHHHHHhCCCCChhhcHHHHHHHcCCceeEEEEEcCCCeEEEEEEEEEeecCCceE--EEEecCCCcCCcCCHH
Confidence 33444555665554445555556666666555433 33444 47898876665322111111 233332 577777
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEc-----HHHHHHHHhCCCeEece
Q 010815 421 QGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSI 462 (500)
Q Consensus 421 iG~~Ll~~l~~~a~~~g~~~I~l~~-----~~a~~fYek~GF~~~~~ 462 (500)
+-..++..+.+ +++.++-.+.+.. ......++++||...+.
T Consensus 86 ll~~~~~~l~~-a~k~~a~~lridP~v~~~~~l~~~l~~lGf~~~~~ 131 (164)
T d1ne9a1 86 LLDRLVDEAVK-ALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRNR 131 (164)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEECCSCBCCHHHHHHHHHTTCEEEST
T ss_pred HHHHHHHHHHH-HHHCCEEEEEECCCCccCHHHHHHHHHCCCccccc
Confidence 77788887765 6666655555543 45688899999998764
|