Citrus Sinensis ID: 010831

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MVSTATTLTLLPHPSLSFSHSSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccEEEEEEEEHHHHccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEccccccccEEEcccccccccccEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEEEccccEEEcccEEEEEEccHHHHccccEEEEcccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccccccccccccccccEEcccccEEEEEcccccccccccccccccccccccccccEEEEccccHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccccEccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEccccEEEccccEEEEEEEEHHHHHHccEEEEEccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvstattltllphpslsfshsssssflaggthlrshKNFAALtlsadscpfggsklnssnarsstyrfgrsvvcasgdyyatlgvpksasgKEIKAAYRKLARqyhpdvnkepgateKFKEISAAYEVLSDDKKRAMYDqygeagvkstvgggssayttnpfdlfetffgpsmggfpgmnqtgfrtrrrstvtkgedLRYDIVLEFSESIFGAekefelshletcevctgtgakmgskmricstcggrgqvmrtdqtpfglfsqvsvcpscggegevISEYCRKCsgegrirlkknikvkvppgvstgSILRVvgegdagprggppgdlyvyldveeipgiqrdgidLFSTISISYLDAIMGTVVKVKTVEgiselqvppgtqpgdVLVLakkgapklnkpsirgdhlFTVKVTIPNRISAKERELLEELASLRNttgsrtrtrpktqaatttspeasqvgtvaekneepedqndpwkkLKDFAGSVANGALKWLKENL
Flexible Loop (DISEMBL)
mvstattltllphpslsfsHSSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKlnssnarsstyrFGRSVVCASGDYYAtlgvpksasgkEIKAAYRKLArqyhpdvnkepgatekfkEISAAYEVLSDDKKRAMYDQYGEagvkstvgggsSAYTTNPFDLFETFFGPSMGGfpgmnqtgfrtrrrstvtkgedlryDIVLEFSESIFGAEKEFELSHLETCEVCTgtgakmgskMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSgegrirlkknikvkvppgvstGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIselqvppgtqpgDVLVLAKKGapklnkpsirgdhlftvkVTIPNRISAKERELLEELAslrnttgsrtrtrpktqaatttspeasqvgtvaekneepedqndpwkKLKDFAGSVANGALKWLKENL
Low Complexity Region (SEG)
MVstattltllphpslsfshsssssflaggtHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETffgpsmggfpgmNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVgegdagprggppgDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIsakerelleelaslrNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Disordered region (IsUnstruct)
*************************************NFAALTL********************TYRFGRSVVCASGDYYATLGVPK******IKAAYRKL***********************AYEVL*******MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRT***STVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG********PGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVP*****GDVLVLAK*********SIRGDHLFTVKVTIPNRI************************************************************************L*******
Disordered Region (DISOPRED)
**************************************************************************ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK*********YTTNPFDLFETFFGPSMG************************RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR***********GPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELL************************************************PWKKLKDFAGSVANGALKWLKEN*
Disordered Region (DISEMBL)
MVSTATTLTLLPHPSL**********LAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT**************************************DPWKKLKDFAGSVANGALKWLKENL
Disordered Region (DISPRO)
**************************LA*GTHLRSHKNFAALTLSADSCPFGGSK*******S**YRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTG**M*SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR***************************************NDPWKKLKDFAGSVANGALKWLKENL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSTATTLTLLPHPSLSFSHSSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	499	2.2.26 [Sep-21-2011]
Q8DKR7	373	Chaperone protein DnaJ OS	yes	no	0.691	0.924	0.550	1e-111
B7KEJ8	375	Chaperone protein DnaJ OS	yes	no	0.707	0.941	0.559	1e-109
B0CAZ0	374	Chaperone protein DnaJ OS	yes	no	0.701	0.935	0.543	1e-109
B8HLD2	374	Chaperone protein DnaJ OS	yes	no	0.703	0.938	0.539	1e-107
B0JW23	374	Chaperone protein DnaJ OS	yes	no	0.711	0.949	0.533	1e-106
Q114R3	374	Chaperone protein DnaJ OS	yes	no	0.711	0.949	0.519	1e-105
Q2JW78	394	Chaperone protein DnaJ OS	yes	no	0.689	0.873	0.529	1e-102
Q55505	377	Chaperone protein DnaJ 1	N/A	no	0.705	0.933	0.538	1e-101
Q7VEJ6	378	Chaperone protein DnaJ OS	yes	no	0.699	0.923	0.511	1e-101
Q5N0G1	376	Chaperone protein DnaJ OS	yes	no	0.693	0.920	0.509	1e-99

>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/363 (55%), Positives = 253/363 (69%), Gaps = 18/363 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           D+Y  LGV +SA  +E+K AYR+LAR+YHPDVNKEPGA EKFKEI+ AYEVLSD + RA 
Sbjct: 4   DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARAN 63

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRT--RRRST 191
           YD++GEAGV      G S +         D+FETFFG            GF T  RR+  
Sbjct: 64  YDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFG------------GFTTSSRRQQG 111

Query: 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 251
            T+GEDLRYD+ LEF E++FG EKE  ++HLETC+ C GTGAK G++   CSTCGG GQV
Sbjct: 112 PTRGEDLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGVGQV 171

Query: 252 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
            R+ +TPFG F+Q++ CP+CGG G VI + C  C G+G I++ K +K+ +P GV  G+ L
Sbjct: 172 RRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNGTRL 231

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 371
           RV GEGDAG RGGPPGDLYVYL V+  P  QR+G ++ S I ISYL AI+G  + V TV+
Sbjct: 232 RVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKISYLQAILGCRISVSTVD 291

Query: 372 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
           G +EL++P GTQPG VLVL  +G P++  P  RGDHL TV V IP  I+ +ERELLE+LA
Sbjct: 292 GEAELKIPAGTQPGTVLVLEGRGVPRVGNPVARGDHLITVDVEIPTHITHEERELLEKLA 351

Query: 432 SLR 434
            +R
Sbjct: 352 KIR 354

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1

 Score =  397 bits (1019), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/359 (55%), Positives = 246/359 (68%), Gaps = 6/359 (1%)

Query: 77  GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA 136
           GDYY  LGV + A+  EIK AYR+LAR+YHPDVNKE GA E+FKEI+ AYE+LS+ + RA
Sbjct: 3   GDYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRA 62

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKG 195
            YD++GEAGV S  G G          D+FET F     GF GM  TG  +RRR+   +G
Sbjct: 63  RYDRFGEAGVSSGAGSGFEYGDMGGIADIFETIFS----GFGGMG-TGTSSRRRTGPVRG 117

Query: 196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD 255
           +DLR D  L F E++FG EKE  + HLETC+VC G+GAK G+  R CSTC G GQV R  
Sbjct: 118 DDLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRAT 177

Query: 256 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 315
           +TPFG F+QVSVCP+C G GEVI E C  C G GR +  K +K+ +P GV  G+ LRV  
Sbjct: 178 RTPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGTRLRVSR 237

Query: 316 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE 375
           EGDAG RGGPPGDLYVYL VE     QR+GID+ S ISISYL AI+G  + V TV+G  E
Sbjct: 238 EGDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRLSVNTVDGPEE 297

Query: 376 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
           + + PGTQP  VL L  +G PKL  P  RGDHL T+ V+IP R++ +ERELLE+LA +R
Sbjct: 298 ITIEPGTQPNTVLTLPNRGVPKLGNPVARGDHLITINVSIPTRVNPEERELLEKLAKIR 356

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7424) (taxid: 65393)

>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1

 Score =  394 bits (1013), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/359 (54%), Positives = 251/359 (69%), Gaps = 9/359 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV +SA   E+K +YR+LAR+YHPDVNKEPGA +KFKEI+ AYE LSD + R  
Sbjct: 4   DYYDILGVSRSADPDELKRSYRRLARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGR 63

Query: 138 YDQYGEAGVKSTVGGGSSAYTT--NPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKG 195
           YDQ+GEAGV S  G G   +       D+FETFF     GF G  Q+G   RRRS   +G
Sbjct: 64  YDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFS----GFGGSPQSG---RRRSGPARG 116

Query: 196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD 255
           EDLR+D+ L+F E++FG E++  +SHLE+C+ C GTGAK G++ + CSTC G GQV R  
Sbjct: 117 EDLRFDLKLKFREAVFGGEQQIRISHLESCKTCEGTGAKPGTRPQTCSTCQGSGQVRRMT 176

Query: 256 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 315
           +TP G F+QVSVCP+C G+G+V++E C  C G G+ ++ K +++K+P GV TG+ LRV  
Sbjct: 177 RTPLGNFTQVSVCPTCNGQGQVVTEKCDSCGGRGQNQVSKKLQIKIPAGVDTGTRLRVSN 236

Query: 316 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE 375
           EGDAG +GGPPGDLYVYL V+E    +RDG ++ S   ISYL AI+G  + VKTV+G   
Sbjct: 237 EGDAGQKGGPPGDLYVYLFVQEDSEFRRDGTNVLSEFKISYLQAILGAQLPVKTVDGEET 296

Query: 376 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
           + +P GTQPG VL L   G P+L  P  RGDHL TV + IPNRIS +ERELL +LAS+R
Sbjct: 297 ITIPAGTQPGTVLTLENHGVPRLGNPVSRGDHLITVIIDIPNRISTEERELLVQLASIR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1

 Score =  390 bits (1001), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/358 (53%), Positives = 250/358 (69%), Gaps = 7/358 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV + A  +++K AYR+LAR+YHPDVNKE GA E+FKEI+ AYEVLSD + RA 
Sbjct: 4   DYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRAR 63

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 196
           YD++GEAGV     G         F D+FE+ F     GF G+      +RRR+  ++G+
Sbjct: 64  YDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFS----GFGGVGAG--TSRRRTGPSRGD 117

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 256
           DLR+D+ LEF E+IFG EK+  ++HLETC  C G+GAK G+K R C TCGG GQV R  +
Sbjct: 118 DLRFDLKLEFREAIFGGEKQIRITHLETCTTCNGSGAKPGTKPRTCGTCGGAGQVRRATR 177

Query: 257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
           TPFG F+QVSVCP+C G+G+VI + C  C G G+ ++ K +K+ +P GV TG+ LRV  E
Sbjct: 178 TPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLRVSNE 237

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 376
           GDAG +GGP GDLYVYL V+E P  +R+GI++ S + ISYL AI+G+ + V TV+G  EL
Sbjct: 238 GDAGQQGGPAGDLYVYLFVQEDPEFRREGINILSEVKISYLQAILGSRLMVNTVDGEVEL 297

Query: 377 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
            +PPGTQP  VL L   G P+L  P  RGDHL TV + IP RISA+ERELLE+LA +R
Sbjct: 298 TIPPGTQPNTVLTLENHGVPRLGNPVSRGDHLITVLLEIPTRISAEERELLEKLAKIR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1

 Score =  384 bits (987), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/360 (53%), Positives = 241/360 (66%), Gaps = 5/360 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV + A  ++IK AYR+LAR+YHPDVNKEPGA E FKEI+ AYE+LS+ + R  
Sbjct: 4   DYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNR 63

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           YD++GEAGV     G          D+FET F     GF GM       RRR+  T+GED
Sbjct: 64  YDRFGEAGVSGGAAGFDPDNMGGFADIFETIFS----GFGGMGGQA-TARRRTGPTRGED 118

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
           LR D  L+F E++FG EKE  + HLETC+ C G+GA+ G+  R C+TC G GQV R  +T
Sbjct: 119 LRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRTCTTCSGTGQVRRATRT 178

Query: 258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 317
           PFG F+QVSVCP+C G GEVI E C  C G GR +  K +K+ +P GV  G  LRV  EG
Sbjct: 179 PFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLRVAREG 238

Query: 318 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
           DAG +GGPPGDL+VYL VE     QR+G D+ S I+ISY+ AI+G  +KV TV+G  +L 
Sbjct: 239 DAGLKGGPPGDLFVYLTVETDAEFQREGNDIKSDITISYIQAILGCTIKVNTVDGQEDLT 298

Query: 378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT 437
           +P GTQP  VL+L  KG PKL  P  RGDH  TVK++IP R++ +ERELLE+LA +R  T
Sbjct: 299 IPAGTQPNTVLILENKGVPKLGNPVSRGDHRITVKISIPTRVTGEERELLEKLAKVRGET 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1

 Score =  381 bits (978), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/364 (51%), Positives = 248/364 (68%), Gaps = 9/364 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV +SA  +E+K AYR+LAR+YHPDVNKEPG+ E+FKEI+ AYE+LSD + +A 
Sbjct: 4   DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKAR 63

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           +D++GEAGV    GG +S ++T+  D F   F     GF G    G   RRR+   +G+D
Sbjct: 64  FDRFGEAGVS---GGAASGFSTDFSDSFADIFESFFSGFGGAGTQG---RRRTGPVRGDD 117

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
           LR D+ LEF E+IFG +KE  + HLETC  C G+GAK G+K + CSTCGG GQV R  +T
Sbjct: 118 LRLDLNLEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRATRT 177

Query: 258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 317
           PF  F+QVSVCPSC G G++I E C  C G G+    K IK+ +P GV  G+ LRV  EG
Sbjct: 178 PFSSFTQVSVCPSCNGSGQIIEEKCVDCGGRGQKEATKKIKITIPGGVDNGTRLRVSNEG 237

Query: 318 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
           DAG  GGPPGDLYV+L V+  P  QRDGI++ S I ISYL AI+G  +++ TV+G +EL 
Sbjct: 238 DAGRMGGPPGDLYVFLSVKNHPEFQRDGINIISQIKISYLQAILGCCLEINTVDGKTELT 297

Query: 378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT 437
           +P GTQP  +L L  KG P+L     RG HL T+++ IP +I+ +E+ELLE+LA ++   
Sbjct: 298 IPSGTQPNAILTLEDKGVPRLGNSVSRGAHLITIEIDIPTKITPEEKELLEKLAKIK--- 354

Query: 438 GSRT 441
           G RT
Sbjct: 355 GERT 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

>sp|Q2JW78|DNAJ_SYNJA Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/372 (52%), Positives = 249/372 (66%), Gaps = 28/372 (7%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV + +S +EIK AYR+LAR+YHPDVNKEPGA ++FKEI+ AYEVLSDD+ RA 
Sbjct: 4   DYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRAR 63

Query: 138 YDQYGEAG----------VKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTR 187
           YD++GEAG           +   G G  A      DLFE+FF    GG  G       +R
Sbjct: 64  YDRFGEAGLSGAAAAASGFQDFAGIGGFA------DLFESFFTNFAGGGVGY------SR 111

Query: 188 RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGG 247
            R    +G+DLR+D+ LEF E+IFG EK+  +SHLE C VC G+GAK G+ +++C TCGG
Sbjct: 112 SRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCPVCGGSGAKPGTDVKVCPTCGG 171

Query: 248 RGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST 307
            GQV R  +TPFG F+QVS+CP+CGG G V+ E C  C+GEG  +  K +++ +P GV +
Sbjct: 172 AGQVRRATRTPFGNFTQVSICPTCGGAGRVLEEPCYNCNGEGLAQTTKKLRINIPAGVDS 231

Query: 308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKV 367
           G+ LRV GEGDAG RGGPPGDLYVYL VE  P  QRDG+ +FS + +SYL AI+G  V V
Sbjct: 232 GTRLRVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQRDGLTIFSQVRVSYLQAILGAKVLV 291

Query: 368 KTV------EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISA 421
            TV      E  +EL +P G+QPG VL L  KG P+L  P +RGDH  T+ V IP RIS+
Sbjct: 292 PTVDSKAGLEEEAELTIPAGSQPGTVLTLEGKGVPRLGNPMLRGDHKITLVVEIPTRISS 351

Query: 422 KERELLEELASL 433
           +ERELL  LA L
Sbjct: 352 EERELLMRLAEL 363

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain JA-3-3Ab) (taxid: 321327)

>sp|Q55505|DNAJ1_SYNY3 Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1

 Score =  370 bits (950), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/362 (53%), Positives = 246/362 (67%), Gaps = 10/362 (2%)

Query: 77  GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA 136
           GDYY TLGV + A   EIK AYR+LAR+YHPDVNKEPGA EKFKEI+ AYEVLS+ + R 
Sbjct: 3   GDYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQ 62

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRSTV 192
            YDQ+GEAGV    GGG+  +         D+FET FG       GM       RR +  
Sbjct: 63  RYDQFGEAGVS---GGGAQGFDVGNMGDFADIFETIFGGFG---GGMGGQQRGRRRANGP 116

Query: 193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
           T+G+DLR D+ L F E+IFG EKE  + HLE+C+VC GTGAK G+ ++ C TC G GQV 
Sbjct: 117 TRGDDLRLDLQLTFQEAIFGGEKEIRIPHLESCQVCEGTGAKPGTGVKTCGTCNGAGQVR 176

Query: 253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
           R  +TPFG F+QVS CP+C G GEVI + C  C+G GR +  K +K+ +P GV  G+ LR
Sbjct: 177 RATRTPFGSFAQVSACPTCNGSGEVIEQKCEACNGVGRKQETKKLKITIPAGVDDGTRLR 236

Query: 313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
           V  EGDAG RGGP GDLYV+L VE      R+G+++ S + +SYL AI+G  ++V TV+G
Sbjct: 237 VGKEGDAGLRGGPAGDLYVFLMVETDKHFVREGMNIRSNLEVSYLQAILGCRLEVDTVDG 296

Query: 373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 432
            +EL +P GTQP  VL L  KG PKL   +IRGDHL TVKV IP RI+++ERELLE LA+
Sbjct: 297 KAELTIPAGTQPNTVLTLENKGVPKLGNATIRGDHLITVKVQIPTRINSEERELLERLAT 356

Query: 433 LR 434
           ++
Sbjct: 357 IK 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q7VEJ6|DNAJ_PROMA Chaperone protein DnaJ OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=dnaJ PE=3 SV=1

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/354 (51%), Positives = 250/354 (70%), Gaps = 5/354 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           D+Y TLGV ++A    +K AYR+LARQYHPD+NKE GA E+FKEI  AYEVL D +KRA 
Sbjct: 3   DFYDTLGVNRNADADSLKRAYRRLARQYHPDINKEAGAEERFKEIGRAYEVLGDPEKRAR 62

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           YDQ+GEAG+  + G           D+FETFF    G       +G RT+RR    +G+D
Sbjct: 63  YDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSGFGG----PGSSGARTQRRGP-QQGDD 117

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
           LRYD+ ++F++++FG E+E ++ HLETC+VC GTGAK G+    CSTCGG GQV R  +T
Sbjct: 118 LRYDLTIDFNQAVFGQEREIKIPHLETCDVCRGTGAKPGTGPTTCSTCGGAGQVRRATRT 177

Query: 258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 317
           PFG F+QVS CP+C G G+VIS+ C+ C G+G  +++K +++ +P GV TG+ LRV GEG
Sbjct: 178 PFGSFTQVSDCPTCSGSGQVISDSCQSCGGQGVKQVRKKLRINIPAGVDTGTRLRVSGEG 237

Query: 318 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
           +AGPRGGP GDLYV+L V+    ++RDG+++ S +++SYL AI+G  ++V TV+G + LQ
Sbjct: 238 NAGPRGGPSGDLYVFLKVKSHARLKRDGLNIHSEVNVSYLQAILGDTIEVDTVDGPTTLQ 297

Query: 378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
           +P GTQP  VL+L  KG PKL  P  RG+H  +V + IP+R++  E+ LLE+LA
Sbjct: 298 IPSGTQPSAVLILDNKGIPKLGNPVARGNHCISVNIKIPSRLTDDEKILLEKLA 351

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) (taxid: 167539)

>sp|Q5N0G1|DNAJ_SYNP6 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1

 Score =  364 bits (934), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 188/369 (50%), Positives = 247/369 (66%), Gaps = 23/369 (6%)

Query: 76  SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
           + DYY  LGV + A   EIK AYR+LAR+YHPDVNKEPGA +KFKEI+ AYEVLS+ + R
Sbjct: 2   AADYYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETR 61

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFR---------- 185
           A YDQ+G            +  +      F+ F    MGGF  + +T F           
Sbjct: 62  ARYDQFG-----------EAGVSGAGAAGFQDF--GDMGGFADIFETFFSGFGGMGGQQA 108

Query: 186 TRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTC 245
           + RR   T+GEDLR D+ L+F ++IFG EKE  ++H ETC  C G+GAK G++ + C+TC
Sbjct: 109 SARRRGPTRGEDLRLDLKLDFRDAIFGGEKEIRVTHEETCGTCQGSGAKAGTRPQTCTTC 168

Query: 246 GGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGV 305
           GG GQV R  +TPFG F+QVSVCP+C G G++I + C  C G GR+R  K +K+ +P GV
Sbjct: 169 GGAGQVRRATRTPFGSFTQVSVCPTCEGSGQMIVDKCDDCGGAGRLRRPKKLKINIPAGV 228

Query: 306 STGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVV 365
            +G+ LRV  EGDAG RGGPPGDLYVYL V E    +R+GI+LFST++ISYL AI+G  +
Sbjct: 229 DSGTRLRVANEGDAGLRGGPPGDLYVYLFVSEDTQFRREGINLFSTVTISYLQAILGCSL 288

Query: 366 KVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERE 425
           +V TV+G +EL +PPGTQP  VL +  KG P+L  P  RG+ L T+KV IP +ISA+ERE
Sbjct: 289 EVATVDGPTELIIPPGTQPNAVLTVEGKGVPRLGNPVARGNLLVTIKVEIPTKISAEERE 348

Query: 426 LLEELASLR 434
           LLE++  +R
Sbjct: 349 LLEKVVQIR 357

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
224134931	492	predicted protein [Populus trichocarpa]	0.855	0.867	0.848	0.0
356554947	489	PREDICTED: chaperone protein DnaJ-like i	0.971	0.991	0.750	0.0
356554945	493	PREDICTED: chaperone protein DnaJ-like i	0.971	0.983	0.750	0.0
255553237	511	chaperone protein DNAj, putative [Ricinu	0.929	0.908	0.803	0.0
359482375	489	PREDICTED: chaperone protein DnaJ-like [	0.847	0.865	0.830	0.0
357455281	496	Chaperone protein dnaJ [Medicago truncat	0.943	0.949	0.758	0.0
449468934	505	PREDICTED: chaperone protein DnaJ-like [	0.939	0.928	0.791	0.0
1707657	498	DnaJ homologue [Pisum sativum]	0.957	0.959	0.744	0.0
297839937	492	hypothetical protein ARALYDRAFT_895995 [	0.929	0.943	0.731	0.0
18412605	500	molecular chaperone Hsp40/DnaJ-like prot	0.929	0.928	0.715	0.0

>gi|224134931|ref|XP_002327525.1| predicted protein [Populus trichocarpa] gi|222836079|gb|EEE74500.1| predicted protein [Populus trichocarpa]

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/428 (84%), Positives = 392/428 (91%), Gaps = 1/428 (0%)

Query: 73  VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD 132
           V ASGDYYATLGVPKSA+ KEIKAAYR+LARQYHPDVNKEPGATEKFKEIS+AYEVLSDD
Sbjct: 65  VYASGDYYATLGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISSAYEVLSDD 124

Query: 133 KKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTV 192
           KKR++YDQYGEAGVKSTVGG SSAYTTNPFDLFETFFG SMGGFPGM QTGF+TRRRSTV
Sbjct: 125 KKRSLYDQYGEAGVKSTVGGPSSAYTTNPFDLFETFFGASMGGFPGMEQTGFKTRRRSTV 184

Query: 193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
           TKGED+RYDI LEFSE+IFGAEKEFELSHLETCEVC GTGAKMGSKMRICSTCGGRGQVM
Sbjct: 185 TKGEDIRYDISLEFSEAIFGAEKEFELSHLETCEVCAGTGAKMGSKMRICSTCGGRGQVM 244

Query: 253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
           RT+QTPFGLFSQVSVCP+CGG+GEVISEYCRKCSGEGRIR+KKNIKVKVPPGV  GSILR
Sbjct: 245 RTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCSGEGRIRVKKNIKVKVPPGVGAGSILR 304

Query: 313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
           V  EGDAGPRGGP GDLYVYLDVEEI GIQRDGI+L STISISY DAI+GTVVKVKTVEG
Sbjct: 305 VAREGDAGPRGGPLGDLYVYLDVEEIRGIQRDGINLTSTISISYADAILGTVVKVKTVEG 364

Query: 373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 432
           +SELQ+PPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFT+KVTIP R+SAKERELLEELAS
Sbjct: 365 MSELQIPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTIKVTIPKRVSAKERELLEELAS 424

Query: 433 LRNTTGSRTRTRPKT-QAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGA 491
           L +   SR+RT+P + Q    +  +  +V TV+E  EE  DQNDPW+KLKDFAGS+ NGA
Sbjct: 425 LSDKNISRSRTQPASKQLFAISRDQEREVETVSETTEESRDQNDPWQKLKDFAGSLTNGA 484

Query: 492 LKWLKENL 499
           LKWLK+NL
Sbjct: 485 LKWLKDNL 492

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554947|ref|XP_003545802.1| PREDICTED: chaperone protein DnaJ-like isoform 2 [Glycine max]

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/497 (75%), Positives = 420/497 (84%), Gaps = 12/497 (2%)

Query: 5   ATTLTLLPHPSLSFSHSSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSS 64
            TTL+LLP         S+     G  HLRSH +F ++  ++ S     S ++  N  S 
Sbjct: 3   VTTLSLLP--------PSTRPCFCGTVHLRSHNSFLSIHSTSSSSFLSFSSISIPN-HSP 53

Query: 65  TYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISA 124
           T R   +V+ +S DYY+TLGVPKSA+GKEIKAAYR+LARQYHPDVNKEPGATEKFKEISA
Sbjct: 54  TRRPFHTVLASSSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISA 113

Query: 125 AYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGF 184
           AYEVLSDDKKRA+YDQYGEAGVKS VGGGSSAYTTNPFDLFETFFGPSMGGF GM+ TGF
Sbjct: 114 AYEVLSDDKKRALYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPSMGGFGGMDPTGF 173

Query: 185 RTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICST 244
            TRRRSTVTKGED+RY+  LEFSE+IFG EKEFELSHLETCEVCTGTGAK+GSKMR+CST
Sbjct: 174 GTRRRSTVTKGEDIRYNFSLEFSEAIFGKEKEFELSHLETCEVCTGTGAKIGSKMRVCST 233

Query: 245 CGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPG 304
           CGGRGQVMRT+QTPFGLFSQVSVCP+CGG+GEVISEYCRKC+GEGRIR+KKNIKVKVPPG
Sbjct: 234 CGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVKKNIKVKVPPG 293

Query: 305 VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTV 364
           VS+GSILRV GEGDAGPRGGPPGDLYVYLDV+EIPGIQRD I+L S +SISYLDAI G V
Sbjct: 294 VSSGSILRVTGEGDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLVSMLSISYLDAIRGAV 353

Query: 365 VKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKER 424
           VKVKTVEGISELQ+P GTQPGDVLVLA+KG PKLNKPSIRGDHLFTVKVTIP RIS KER
Sbjct: 354 VKVKTVEGISELQIPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKER 413

Query: 425 ELLEELASLRNTTGSRTRTRPKTQA--ATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKD 482
           EL+EELA+L + +  R+++RP+T +  + T   + S   TV EK E+ ED+ND W KLKD
Sbjct: 414 ELIEELATLGDAS-RRSKSRPRTHSSGSPTAQKDESPTATVEEKTEKSEDENDVWNKLKD 472

Query: 483 FAGSVANGALKWLKENL 499
           FAGSVANGALKW K+NL
Sbjct: 473 FAGSVANGALKWFKDNL 489

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554945|ref|XP_003545801.1| PREDICTED: chaperone protein DnaJ-like isoform 1 [Glycine max]

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/501 (75%), Positives = 422/501 (84%), Gaps = 16/501 (3%)

Query: 5   ATTLTLLPHPSLSFSHSSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSS 64
            TTL+LLP         S+     G  HLRSH +F ++  ++ S     S ++  N  S 
Sbjct: 3   VTTLSLLP--------PSTRPCFCGTVHLRSHNSFLSIHSTSSSSFLSFSSISIPN-HSP 53

Query: 65  TYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISA 124
           T R   +V+ +S DYY+TLGVPKSA+GKEIKAAYR+LARQYHPDVNKEPGATEKFKEISA
Sbjct: 54  TRRPFHTVLASSSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISA 113

Query: 125 AYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGF 184
           AYEVLSDDKKRA+YDQYGEAGVKS VGGGSSAYTTNPFDLFETFFGPSMGGF GM+ TGF
Sbjct: 114 AYEVLSDDKKRALYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPSMGGFGGMDPTGF 173

Query: 185 RTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICST 244
            TRRRSTVTKGED+RY+  LEFSE+IFG EKEFELSHLETCEVCTGTGAK+GSKMR+CST
Sbjct: 174 GTRRRSTVTKGEDIRYNFSLEFSEAIFGKEKEFELSHLETCEVCTGTGAKIGSKMRVCST 233

Query: 245 CGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPG 304
           CGGRGQVMRT+QTPFGLFSQVSVCP+CGG+GEVISEYCRKC+GEGRIR+KKNIKVKVPPG
Sbjct: 234 CGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVKKNIKVKVPPG 293

Query: 305 VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTV 364
           VS+GSILRV GEGDAGPRGGPPGDLYVYLDV+EIPGIQRD I+L S +SISYLDAI G V
Sbjct: 294 VSSGSILRVTGEGDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLVSMLSISYLDAIRGAV 353

Query: 365 VKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKER 424
           VKVKTVEGISELQ+P GTQPGDVLVLA+KG PKLNKPSIRGDHLFTVKVTIP RIS KER
Sbjct: 354 VKVKTVEGISELQIPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKER 413

Query: 425 ELLEELASLRNTTGSRTRTRPKTQAA--TTTSPEA----SQVGTVAEKNEEPEDQNDPWK 478
           EL+EELA+L + +  R+++RP+T ++   T SP A    S   TV EK E+ ED+ND W 
Sbjct: 414 ELIEELATLGDAS-RRSKSRPRTHSSGGGTESPTAQKDESPTATVEEKTEKSEDENDVWN 472

Query: 479 KLKDFAGSVANGALKWLKENL 499
           KLKDFAGSVANGALKW K+NL
Sbjct: 473 KLKDFAGSVANGALKWFKDNL 493

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553237|ref|XP_002517661.1| chaperone protein DNAj, putative [Ricinus communis] gi|223543293|gb|EEF44825.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/468 (80%), Positives = 417/468 (89%), Gaps = 4/468 (0%)

Query: 32  HLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASG 91
           HL SHK F++L L++    F     +SS++ SS  R+G  +  ASGDYYATLGVPKSA+ 
Sbjct: 48  HLWSHKKFSSLALTS-PLKFKTKTASSSSSSSSNNRYGPEI-NASGDYYATLGVPKSATS 105

Query: 92  KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG 151
           KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD KR+MYD+YGEAGVKS VG
Sbjct: 106 KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDNKRSMYDRYGEAGVKSAVG 165

Query: 152 GGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIF 211
           G SSAYTTNPFDLFETFFG SMGGFPG+ +TGF TRRRSTVTKGEDLRYDI LEFSE+IF
Sbjct: 166 GASSAYTTNPFDLFETFFGSSMGGFPGV-ETGFGTRRRSTVTKGEDLRYDITLEFSEAIF 224

Query: 212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 271
           GAEKEF+LSHLETCEVCTGTGAK+GSKMRICSTCGGRGQVMRT+QTPFGLFSQVSVCP+C
Sbjct: 225 GAEKEFDLSHLETCEVCTGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPTC 284

Query: 272 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYV 331
           GGEGEVISEYCRKCSGEGRIR++KNIKVKVPPGVSTGSILRV GEGDAGPRGGPPGDL+V
Sbjct: 285 GGEGEVISEYCRKCSGEGRIRVRKNIKVKVPPGVSTGSILRVAGEGDAGPRGGPPGDLFV 344

Query: 332 YLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLA 391
           YLDV+EI GIQRDGI+L STI+ISYLDAI+G VVKVKTVEG+S+LQ+  GTQPGDVLVLA
Sbjct: 345 YLDVQEISGIQRDGINLNSTITISYLDAILGAVVKVKTVEGMSDLQILAGTQPGDVLVLA 404

Query: 392 KKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAAT 451
           KKGAPKLNKPSIRGDHLFT+KVTIP+R SAKERELLEELASL NTT S++RTR KT  A 
Sbjct: 405 KKGAPKLNKPSIRGDHLFTIKVTIPSRTSAKERELLEELASLSNTTSSQSRTRTKTPPA- 463

Query: 452 TTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL 499
           + S E+  V TV EK+EE   +ND W+K+KD AGSVANGA+KWLK+NL
Sbjct: 464 SRSRESPPVETVEEKSEESGKENDLWQKVKDLAGSVANGAMKWLKDNL 511

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482375|ref|XP_002265060.2| PREDICTED: chaperone protein DnaJ-like [Vitis vinifera] gi|297743480|emb|CBI36347.3| unnamed protein product [Vitis vinifera]

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/425 (83%), Positives = 388/425 (91%), Gaps = 2/425 (0%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKK 134
           AS DYY+TLGVPKSA+ KEIKAAYRKLARQYHPDVNK+PGATEKFKEISAAYEVLSDDKK
Sbjct: 67  ASSDYYSTLGVPKSANSKEIKAAYRKLARQYHPDVNKQPGATEKFKEISAAYEVLSDDKK 126

Query: 135 RAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 194
           RA+YDQ+GEAGVKS VGG + AYTTNPFDLFETFFGPSMGGF GM+Q GFRTRRR+TV+K
Sbjct: 127 RALYDQFGEAGVKSGVGGQAGAYTTNPFDLFETFFGPSMGGFSGMDQAGFRTRRRTTVSK 186

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
           GED+RYD+ L+FSE+IFGAEKEFELSHLETCEVCTGTGAK+GSKMRICSTCGGRGQVMRT
Sbjct: 187 GEDIRYDMTLKFSEAIFGAEKEFELSHLETCEVCTGTGAKIGSKMRICSTCGGRGQVMRT 246

Query: 255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 314
           +QTPFGLFSQVSVCP+CGG+GEVISEYCRKCSGEGRIR+KK+IKVKVPPGVS GSILRV 
Sbjct: 247 EQTPFGLFSQVSVCPTCGGDGEVISEYCRKCSGEGRIRVKKDIKVKVPPGVSKGSILRVA 306

Query: 315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 374
           GEGDAG RGGPPGDL+VYLDVEEIP IQRDGI+L ST+++SYLDAI+G VVKVKTVEG++
Sbjct: 307 GEGDAGLRGGPPGDLFVYLDVEEIPEIQRDGINLCSTVTVSYLDAILGAVVKVKTVEGVT 366

Query: 375 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
           ELQ+P GTQPGDVLVLAKKGAPKLN+P+IRGDHLFTVKVTIPNRISAKERELLEELA L 
Sbjct: 367 ELQIPSGTQPGDVLVLAKKGAPKLNRPTIRGDHLFTVKVTIPNRISAKERELLEELAFLS 426

Query: 435 NTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKW 494
           N T SR+RTRPK Q AT +    SQ   V EK E+  D ND WKKLKDFAGSVA+GAL W
Sbjct: 427 NNTSSRSRTRPKAQPATKS--RESQKDAVTEKTEDAGDDNDVWKKLKDFAGSVASGALNW 484

Query: 495 LKENL 499
           LK+N 
Sbjct: 485 LKDNF 489

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357455281|ref|XP_003597921.1| Chaperone protein dnaJ [Medicago truncatula] gi|355486969|gb|AES68172.1| Chaperone protein dnaJ [Medicago truncatula]

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/484 (75%), Positives = 411/484 (84%), Gaps = 13/484 (2%)

Query: 24  SSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGR--SVVCASGDYYA 81
           S F AGG HLRSH NF    LS  S PF  +  NS+   SS  R  R  +V  AS DYY+
Sbjct: 18  SCFCAGGIHLRSHNNF----LSIHSSPFPSTFSNSNTKFSSGTRPKRFHTVFAASSDYYS 73

Query: 82  TLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQY 141
           TLGVPKSA+GKEIKAAYR+LARQYHPDVNKEPGAT+KFKEIS AYEVLSDDKKRA+YDQY
Sbjct: 74  TLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQY 133

Query: 142 GEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYD 201
           GEAGVKS+VGGGSSAY TNPFDLFETFFGP+MGGF  M+ +GF TRRRSTVTKGED+RYD
Sbjct: 134 GEAGVKSSVGGGSSAYATNPFDLFETFFGPNMGGFSTMDPSGFGTRRRSTVTKGEDIRYD 193

Query: 202 IVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGL 261
             LEFSE+IFG EKEFEL HLETC+ CTGTGAK+GSKMR+CSTCGGRGQVMRT+QTPFGL
Sbjct: 194 FSLEFSEAIFGTEKEFELFHLETCDACTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGL 253

Query: 262 FSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGP 321
           FSQVSVCP+CGG+GEVISE CRKCSGEGRIR+KKNIKVKVPPGVS GSILRV GEGDAGP
Sbjct: 254 FSQVSVCPNCGGDGEVISESCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVTGEGDAGP 313

Query: 322 RGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG 381
           RGGPPGDLYVYL+V EIPGIQRD ++L STISISYL+AI+G+VVKVKTVEG SELQ+P G
Sbjct: 314 RGGPPGDLYVYLNVLEIPGIQRDDVNLRSTISISYLEAILGSVVKVKTVEGTSELQIPAG 373

Query: 382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRT 441
           TQPGDVLVLA+KG PKLN+PSIRGDHLFTVKVTIP RIS+KERE+LEELASL N + S +
Sbjct: 374 TQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGNPS-SHS 432

Query: 442 RTRPKTQ--AATTTSPEA----SQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWL 495
           ++RP+TQ  A +  SP      S   TV E+ E+ ED++D W KLK+ AGSVANGALKW 
Sbjct: 433 KSRPRTQPSAGSKESPAVQMAESPTATVTEEPEKSEDEDDLWNKLKNVAGSVANGALKWF 492

Query: 496 KENL 499
           K+NL
Sbjct: 493 KDNL 496

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468934|ref|XP_004152176.1| PREDICTED: chaperone protein DnaJ-like [Cucumis sativus] gi|449522377|ref|XP_004168203.1| PREDICTED: chaperone protein DnaJ-like [Cucumis sativus]

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/475 (79%), Positives = 413/475 (86%), Gaps = 6/475 (1%)

Query: 29  GGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKS 88
           GGT LR HKNF ++   + +          +   SS  R G  VVCASGDYYATLG+PKS
Sbjct: 33  GGTQLRFHKNFLSVHSYSFNSSPSSPNSRFNKRVSSRRRLGL-VVCASGDYYATLGIPKS 91

Query: 89  ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS 148
           A+ KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA+YDQYGEAGVKS
Sbjct: 92  ANSKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKS 151

Query: 149 TVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSE 208
           TVGG SSAYTTNPFDLFETFFGPSMGGF GM+ TGFRTRR ST+TKGED+RYDI L  SE
Sbjct: 152 TVGG-SSAYTTNPFDLFETFFGPSMGGFGGMDPTGFRTRRSSTLTKGEDIRYDINLGSSE 210

Query: 209 SIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVC 268
           +IFG+EKEFELSHLETCEVCTGTG+K+GSKMRICSTCGGRGQVMRT+QTPFGLFSQVSVC
Sbjct: 211 AIFGSEKEFELSHLETCEVCTGTGSKVGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVC 270

Query: 269 PSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGD 328
           P+CGG GEVIS++CRKCSGEGRIR+KKNIKVKVPPGVS GSILRV GEGDAGPRGGPPGD
Sbjct: 271 PNCGGNGEVISDFCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVAGEGDAGPRGGPPGD 330

Query: 329 LYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVL 388
           L+VYLDVEEIPGIQRDGI+L+STI+ISYLDAIMG+VVKVKTVEG++ELQ+PPGTQPGDVL
Sbjct: 331 LFVYLDVEEIPGIQRDGINLYSTIAISYLDAIMGSVVKVKTVEGMAELQIPPGTQPGDVL 390

Query: 389 VLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT--TGSRTRTRPK 446
           VLAKKG PKLNKPSIRGDHLFT+KVTIPNRIS KERELLEELASL N   TGSR RTR K
Sbjct: 391 VLAKKGVPKLNKPSIRGDHLFTIKVTIPNRISEKERELLEELASLSNNAGTGSRFRTRQK 450

Query: 447 TQAATTTSPEASQVGTVAEKNEEPE--DQNDPWKKLKDFAGSVANGALKWLKENL 499
           +Q   T +   ++V TVA   E  +  D ND WKK++DFAGSVA GALKWLK+NL
Sbjct: 451 SQPQPTNTITENEVKTVANSTESADDGDSNDIWKKVQDFAGSVAQGALKWLKDNL 505

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1707657|emb|CAA96305.1| DnaJ homologue [Pisum sativum]

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/486 (74%), Positives = 409/486 (84%), Gaps = 8/486 (1%)

Query: 21  SSSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYY 80
           ++ S F A G H RSH             PF  +  NS++  S+  +   +V  AS DYY
Sbjct: 14  TTHSCFCASGIHFRSHTTTNNFLSIHSPSPFPSTFSNSNSKFSARRKRFHTVFAASSDYY 73

Query: 81  ATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQ 140
           ATLGVPKSA+ K+IKAAYR+LARQYHPDVNKEPGAT+KFKEIS AYEVLSDDKKRA+YDQ
Sbjct: 74  ATLGVPKSATVKDIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQ 133

Query: 141 YGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRY 200
           YGEAGVKS+VGGGSSAY TNPFDLFETFFG +MGGF GM+ TGF TRRRSTVTKGED+RY
Sbjct: 134 YGEAGVKSSVGGGSSAYATNPFDLFETFFGSNMGGFGGMDPTGFGTRRRSTVTKGEDIRY 193

Query: 201 DIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFG 260
           D  LEFSE+IFGAEKEFEL HLETCEVCTGTGAK+GSKMR+CSTCGGRGQVMRT+QTPFG
Sbjct: 194 DFSLEFSEAIFGAEKEFELFHLETCEVCTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFG 253

Query: 261 LFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAG 320
           LFSQVSVCP+CGG+GEVISE CRKCSG GRIR+KKN+KVKVPPGVS+GSILRV GEGDAG
Sbjct: 254 LFSQVSVCPNCGGDGEVISENCRKCSGAGRIRVKKNMKVKVPPGVSSGSILRVTGEGDAG 313

Query: 321 PRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPP 380
           PRGGPPGDLYVYLDV EIPGIQRD I+L STISI+YLDAI+G+VVKVKTVEG SELQ+P 
Sbjct: 314 PRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISITYLDAILGSVVKVKTVEGTSELQIPS 373

Query: 381 GTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSR 440
           GTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKVTIP RIS+KERE+LEELASL  T+ S 
Sbjct: 374 GTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGGTS-SH 432

Query: 441 TRTRPKTQAATTT--SPEA----SQVGTVAEKNEEPEDQNDP-WKKLKDFAGSVANGALK 493
           +R+RP+TQ +T +  +P A    S   TV EK E+ E+++D  W KLK+ AGSVANGALK
Sbjct: 433 SRSRPRTQPSTGSKEAPAAQRAESPTETVTEKPEKSEEEDDDLWNKLKNMAGSVANGALK 492

Query: 494 WLKENL 499
           W K+NL
Sbjct: 493 WFKDNL 498

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839937|ref|XP_002887850.1| hypothetical protein ARALYDRAFT_895995 [Arabidopsis lyrata subsp. lyrata] gi|297333691|gb|EFH64109.1| hypothetical protein ARALYDRAFT_895995 [Arabidopsis lyrata subsp. lyrata]

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/481 (73%), Positives = 404/481 (83%), Gaps = 17/481 (3%)

Query: 22  SSSSFLAGGTHLRSHKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYA 81
           S SS   GGT+LR HK+F +L+ S+   P+   +  S             V  ASGDYYA
Sbjct: 26  SLSSNFDGGTNLRYHKSFLSLSSSS---PYRNRRCRS-----------LVVFAASGDYYA 71

Query: 82  TLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQY 141
           TLGVPKSA+ KEIKAAYR+LARQYHPDVNKEPGAT+KFKEISAAYEVLSD++KRA+YDQY
Sbjct: 72  TLGVPKSANNKEIKAAYRRLARQYHPDVNKEPGATDKFKEISAAYEVLSDEQKRALYDQY 131

Query: 142 GEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYD 201
           GEAGVKSTVGG S  YTTNPFDLFETFFG SMGGFPG++Q  F   RRS VTKGEDLRYD
Sbjct: 132 GEAGVKSTVGGASGTYTTNPFDLFETFFGASMGGFPGVDQADFGRTRRSRVTKGEDLRYD 191

Query: 202 IVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGL 261
           I LE SE+IFG+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+QTPFG+
Sbjct: 192 ITLELSEAIFGSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQTPFGM 251

Query: 262 FSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGP 321
           FSQVS+CP+CGG+GEVISE CRKCSGEGR+R KK+IKVK+PPGVS GSILRV GEGD+GP
Sbjct: 252 FSQVSICPNCGGDGEVISENCRKCSGEGRVRTKKSIKVKIPPGVSAGSILRVAGEGDSGP 311

Query: 322 RGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG 381
           RGGPPGDLYVYLDVE++ GIQRDGI+L ST+SISYLDAI+G VVKVKTVEG +ELQ+PPG
Sbjct: 312 RGGPPGDLYVYLDVEDVRGIQRDGINLLSTLSISYLDAILGAVVKVKTVEGDTELQIPPG 371

Query: 382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRT 441
           TQPGDVLVLAKKG PKLN+PSIRGDHLFTVKV+IPN+ISA ERELLEELASL++T+ +R+
Sbjct: 372 TQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSIPNQISAGERELLEELASLKDTSSNRS 431

Query: 442 RTRPKTQAATTTSPEASQVGTVAE---KNEEPEDQNDPWKKLKDFAGSVANGALKWLKEN 498
           RTR K Q  ++ S   S +    +   +NEE E +ND WK +KDFAGSVANGALKWL++N
Sbjct: 432 RTRAKPQQPSSLSSAPSSLENRTDEVEENEEAEQENDLWKNIKDFAGSVANGALKWLRDN 491

Query: 499 L 499
           L
Sbjct: 492 L 492

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412605|ref|NP_565227.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|30699481|ref|NP_849910.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|30699483|ref|NP_849911.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|110739057|dbj|BAF01446.1| hypothetical protein [Arabidopsis thaliana] gi|332198224|gb|AEE36345.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|332198225|gb|AEE36346.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|332198226|gb|AEE36347.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana]

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/488 (71%), Positives = 407/488 (83%), Gaps = 24/488 (4%)

Query: 21  SSSSSFLAGGTHLRSHKNFAALTLSADS-CPFGGSKLNSSNARSSTYRFGRSVV--CASG 77
           S+ S+F  GG++ R HK+F +L+ S+ S  P+               R GRS+V    SG
Sbjct: 28  SNFSAFSDGGSNFRYHKSFLSLSSSSSSSTPY-------------RNRRGRSLVVFATSG 74

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYYATLGV KSA+ KEIKAAYR+LARQYHPDVNKEPGATEKFKEISAAYEVLSD++KRA+
Sbjct: 75  DYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDEQKRAL 134

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           YDQYGEAGVKSTVGG S  YT+NPFDLFETFFG SMGGFPGM+Q  F   RRS VTKGED
Sbjct: 135 YDQYGEAGVKSTVGGASGPYTSNPFDLFETFFGASMGGFPGMDQADFGRTRRSRVTKGED 194

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
           LRYDI LE SE+IFG+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+QT
Sbjct: 195 LRYDITLELSEAIFGSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQT 254

Query: 258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 317
           PFG+FSQVS+CP+CGG+GEVISE CRKCSGEGR+R+KK+IKVK+PPGVS GSILRV GEG
Sbjct: 255 PFGMFSQVSICPNCGGDGEVISENCRKCSGEGRVRIKKSIKVKIPPGVSAGSILRVAGEG 314

Query: 318 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
           D+GPRGGPPGDLYVYLDVE++ GI+RDGI+L ST+SISYLDAI+G VVKVKTVEG +ELQ
Sbjct: 315 DSGPRGGPPGDLYVYLDVEDVRGIERDGINLLSTLSISYLDAILGAVVKVKTVEGDTELQ 374

Query: 378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT 437
           +PPGTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKV++PN+ISA ERELLEELASL++T+
Sbjct: 375 IPPGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSVPNQISAGERELLEELASLKDTS 434

Query: 438 GSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDP------WKKLKDFAGSVANGA 491
            +R+RTR K Q  +T S   S  G+  +K+E  E+  +P      W  +K+FAGSVANGA
Sbjct: 435 SNRSRTRAKPQQPSTLSTAPS--GSENKKDEVKEENEEPEQENYLWNNIKEFAGSVANGA 492

Query: 492 LKWLKENL 499
           LKWL++NL
Sbjct: 493 LKWLRDNL 500

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
TAIR|locus:2016234	500	AT1G80030 [Arabidopsis thalian	0.925	0.924	0.663	1.3e-162
TAIR|locus:2088585	517	AT3G17830 [Arabidopsis thalian	0.809	0.781	0.422	6.5e-90
TAIR|locus:2140035	447	AT4G39960 [Arabidopsis thalian	0.735	0.821	0.489	5.3e-88
TAIR|locus:2041258	442	AT2G22360 [Arabidopsis thalian	0.729	0.823	0.490	6.7e-88
TIGR_CMR|CHY_0416	381	CHY_0416 "chaperone protein dn	0.677	0.887	0.406	6.2e-62
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.669	0.900	0.390	2.7e-61
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.655	0.876	0.417	3.9e-60
UNIPROTKB|P95830	378	dnaJ "Chaperone protein DnaJ"	0.663	0.875	0.385	8.1e-60
TIGR_CMR|DET_1398	356	DET_1398 "co-chaperone protein	0.663	0.929	0.365	1.5e-58
UNIPROTKB|P08622	376	dnaJ [Escherichia coli K-12 (t	0.655	0.869	0.377	4.8e-55

TAIR|locus:2016234 AT1G80030 [Arabidopsis thaliana (taxid:3702)]

 Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
 Identities = 313/472 (66%), Positives = 367/472 (77%)

Query:    38 NFAALTLSADSCPFGGS--KLNSSNARSSTYRF--GRSVV--CASGDYYATLGVPKSASG 91
             NF+A +    +  +  S   L+SS++ S+ YR   GRS+V    SGDYYATLGV KSA+ 
Sbjct:    29 NFSAFSDGGSNFRYHKSFLSLSSSSSSSTPYRNRRGRSLVVFATSGDYYATLGVSKSANN 88

Query:    92 KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG 151
             KEIKAAYR+LARQYHPDVNKEPGATEKFKEISAAYEVLSD++KRA+YDQYGEAGVKSTVG
Sbjct:    89 KEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDEQKRALYDQYGEAGVKSTVG 148

Query:   152 GGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIF 211
             G S  YT+NPFDLFET            +Q  F   RRS VTKGEDLRYDI LE SE+IF
Sbjct:   149 GASGPYTSNPFDLFETFFGASMGGFPGMDQADFGRTRRSRVTKGEDLRYDITLELSEAIF 208

Query:   212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 271
             G+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+QTPFG+FSQVS+CP+C
Sbjct:   209 GSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSICPNC 268

Query:   272 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYV 331
             GG+GEVISE CRKCSGEGR+R+KK+IKVK+PPGVS GSILRV              DLYV
Sbjct:   269 GGDGEVISENCRKCSGEGRVRIKKSIKVKIPPGVSAGSILRVAGEGDSGPRGGPPGDLYV 328

Query:   332 YLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLA 391
             YLDVE++ GI+RDGI+L ST+SISYLDAI+G VVKVKTVEG +ELQ+PPGTQPGDVLVLA
Sbjct:   329 YLDVEDVRGIERDGINLLSTLSISYLDAILGAVVKVKTVEGDTELQIPPGTQPGDVLVLA 388

Query:   392 KKGAPKLNKPSIRGDHLFTVKVTIPNRIXXXXXXXXXXXXXXXNTTGSRTRTRPKTQAAT 451
             KKG PKLN+PSIRGDHLFTVKV++PN+I               +T+ +R+RTR K Q  +
Sbjct:   389 KKGVPKLNRPSIRGDHLFTVKVSVPNQISAGERELLEELASLKDTSSNRSRTRAKPQQPS 448

Query:   452 T--TSPEASQ--VGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL 499
             T  T+P  S+     V E+NEEPE +N  W  +K+FAGSVANGALKWL++NL
Sbjct:   449 TLSTAPSGSENKKDEVKEENEEPEQENYLWNNIKEFAGSVANGALKWLRDNL 500

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

TAIR|locus:2088585 AT3G17830 [Arabidopsis thaliana (taxid:3702)]

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 180/426 (42%), Positives = 264/426 (61%)

Query:    63 SSTYRFGRSVVCASG-DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKE 121
             S  YR  R +  A+G D+Y+TL V ++A+ +EIK++YRKLAR+YHPD+NK PGA +KFK+
Sbjct:    48 SGGYR-RRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQ 106

Query:   122 ISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYT-TNPFDLFETXXXXXXXXXXXXN 180
             ISAAYEVLSD++KR+ YD++GEAG++    G        +PFDL+               
Sbjct:   107 ISAAYEVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMG 166

Query:   181 QTG---FRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS 237
             ++G   F    + ++    D+RYD+ L F E++FG ++E E+S+LETC+ C GTGAK  +
Sbjct:   167 ESGGMGFDFMNKRSLDL--DIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSN 224

Query:   238 KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNI 297
              ++ CS+C G+G+VM + +TPFG+ SQVS C  CGGEG+ I++ CRKC G GR+R +K +
Sbjct:   225 SIKQCSSCDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKM 284

Query:   298 KVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYL 357
              V VPPGVS  + +R+              DL++ L V+E  GI+R+G++L+S I+I + 
Sbjct:   285 DVVVPPGVSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFT 344

Query:   358 DAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPN 417
             DAI+G   KV+TVEG  +L++PPGTQPGD + L +KG P  ++PSIRGDH F VK++IP 
Sbjct:   345 DAILGATTKVETVEGSMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPK 404

Query:   418 RIXXXXXXXXXXXXXXXNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPW 477
             ++                ++ S   T P     T T  E    G+      EP  +   W
Sbjct:   405 KLSERERKLVEEFSSLRRSSSS---TGP-----TETRQEEQSFGS------EPRKEPSLW 450

Query:   478 KKLKDF 483
              K+K+F
Sbjct:   451 HKMKNF 456

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2140035 AT4G39960 [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 182/372 (48%), Positives = 234/372 (62%)

Query:    48 SCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHP 107
             S PF    L   +  + + R  R  V A  D+Y+ LGV K+A+  EIK+AYRKLAR YHP
Sbjct:    57 SLPF--LSLTGVSPNTHSRRGARFTVRADTDFYSVLGVSKNATKAEIKSAYRKLARSYHP 114

Query:   108 DVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFET 167
             DVNK+ GA +KFKEIS AYE+LSDD+KR++YD+YGEAGVK    GG   Y+ NPFDLFE+
Sbjct:   115 DVNKDAGAEDKFKEISNAYEILSDDEKRSLYDRYGEAGVKGAGMGGMGDYS-NPFDLFES 173

Query:   168 XXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEV 227
                            G R  R S    GED  Y ++L F E++FG EKE E+S LE+C  
Sbjct:   174 LFEGMGGMGGMGGGMGSRGSR-SRAIDGEDEYYSLILNFKEAVFGIEKEIEISRLESCGT 232

Query:   228 CTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSG 287
             C G+GAK G+K   C TCGG+GQV+ + +TP G+F QV  C  C G GE IS+ C  CSG
Sbjct:   233 CNGSGAKAGTKPTKCKTCGGQGQVVASTRTPLGVFQQVMTCSPCNGTGE-ISKPCGACSG 291

Query:   288 EGRIRLKKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGID 347
             +GR+R  K I +KVP GV +GS LRV              DL+  ++V   P ++RD  +
Sbjct:   292 DGRVRRTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFAVIEVIPDPVLKRDDTN 351

Query:   348 LFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDH 407
             +  T  ISY+DAI+GT +KV TV+G  +L+VP GTQP   LV+AKKG P LNK  +RGD 
Sbjct:   352 ILYTCKISYVDAILGTTLKVPTVDGEVDLKVPAGTQPSTTLVMAKKGVPVLNKSKMRGDQ 411

Query:   408 LFTVKVTIPNRI 419
             L  V+V IP R+
Sbjct:   412 LVRVQVEIPKRL 423

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TAIR|locus:2041258 AT2G22360 [Arabidopsis thaliana (taxid:3702)]

 Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
 Identities = 184/375 (49%), Positives = 236/375 (62%)

Query:    45 SADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQ 104
             S  S PF      S N      R  R  V A  DYY+ LGV K+A+  EIK+AYRKLAR 
Sbjct:    54 SHGSLPFLSMTGMSRNMHPPR-RGSRFTVRADADYYSVLGVSKNATKAEIKSAYRKLARN 112

Query:   105 YHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDL 164
             YHPDVNK+PGA EKFKEIS AYEVLSDD+K+++YD+YGEAG+K   G G+  ++ NPFDL
Sbjct:   113 YHPDVNKDPGAEEKFKEISNAYEVLSDDEKKSLYDRYGEAGLKGAAGFGNGDFS-NPFDL 171

Query:   165 FETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLET 224
             F++               G     RS    G+D  Y ++L F E++FG EKE E+S LE+
Sbjct:   172 FDSLFEGFGG--------GMGRGSRSRAVDGQDEYYTLILNFKEAVFGMEKEIEISRLES 223

Query:   225 CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK 284
             C  C G+GAK G+K   C+TCGG+GQV+   +TP G+F QV  C SC G GE IS  C  
Sbjct:   224 CGTCEGSGAKPGTKPTKCTTCGGQGQVVSAARTPLGVFQQVMTCSSCNGTGE-ISTPCGT 282

Query:   285 CSGEGRIRLKKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRD 344
             CSG+GR+R  K I +KVP GV +GS LRV              DL+V ++V   P ++RD
Sbjct:   283 CSGDGRVRKTKRISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFVVIEVIPDPILKRD 342

Query:   345 GIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIR 404
               ++  T  ISY+DAI+GT +KV TV+G  +L+VP GTQP   LV+AKKG P LNK ++R
Sbjct:   343 DTNILYTCKISYIDAILGTTLKVPTVDGTVDLKVPAGTQPSTTLVMAKKGVPVLNKSNMR 402

Query:   405 GDHLFTVKVTIPNRI 419
             GD L  V+V IP R+
Sbjct:   403 GDQLVRVQVEIPKRL 417

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 141/347 (40%), Positives = 197/347 (56%)

Query:    78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRA 136
             DYY  LGV ++A+ +EIK AYRKLAR+YHPDVNK+ P A EKFKEI+ AYEVLSD +KRA
Sbjct:     4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRA 63

Query:   137 MYDQYGEAGVKSTV---GGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVT 193
              YDQ+G AGV       GG       N  D+F                +G R  R+  V 
Sbjct:    64 RYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFG-SG-RKARQGPVP 121

Query:   194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 253
              G+D+   + L   E++FG EKE  ++  ETC  C G GA+ G+ +  C TC GRGQ+ +
Sbjct:   122 -GDDIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIHQ 180

Query:   254 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 313
               +T FG   +  VC +C GEG++    CR+C G G +R  ++I VK+PPG+  G  LR+
Sbjct:   181 EVKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHGHRLRI 240

Query:   314 VXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 373
                           DLYVY+ ++     +R+ I L     IS++ A +G  V++ T++G 
Sbjct:   241 AGGGEAGRFGGPPGDLYVYIKIKPHKLFKREDIHLKLEKEISFVQAALGAKVEIPTIDGG 300

Query:   374 SE-LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 419
             +E L++P GTQ G V  +  KG P +N  S RG+   TVKV  P ++
Sbjct:   301 TEILEIPEGTQTGTVFTIKGKGVPVVNG-SGRGNLYVTVKVVTPTKL 346

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 134/343 (39%), Positives = 179/343 (52%)

Query:    78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
             DYY  LG+ K AS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSDD+KRA 
Sbjct:     5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query:   138 YDQYGEAGVKSTVGG-GSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 196
             YDQ+G AG     GG G        F  FE                G R R  +   +G 
Sbjct:    65 YDQFGHAGANQGFGGFGGGGDFGGGFG-FEDIFSSFFGGG------GGRRRDPNAPRQGA 117

Query:   197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 256
             DL+Y + LEF E+IFG E   E+   + C+ C G+GAK G+    C  C G GQV     
Sbjct:   118 DLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQN 177

Query:   257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 316
             TPFG       C  C G G++I E C  C G G++R +K I VK+P G+  G  +RV   
Sbjct:   178 TPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIRVSGK 237

Query:   317 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 376
                        DLYV + V      +R+G  +   + +++    +G  V+V TV G  +L
Sbjct:   238 GEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEVPTVHGKVKL 297

Query:   377 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 419
             ++P GTQ G    L  KGAP +     +GD    V+V +P ++
Sbjct:   298 KIPAGTQTGTEFRLKGKGAPNVRGYG-QGDQYVVVRVVVPTKL 339

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 145/347 (41%), Positives = 192/347 (55%)

Query:    78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG-ATEKFKEISAAYEVLSDDKKRA 136
             DYY  LGV K+AS  EIK A+RKLA QYHPD N +   A EKFKEI+ AYEVLSD +KRA
Sbjct:     7 DYYEVLGVHKNASDTEIKKAFRKLAIQYHPDKNPDDKEAEEKFKEITEAYEVLSDPQKRA 66

Query:   137 MYDQYGEAGVKST--VGGGSSAYTTN-PF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTV 192
              YDQ+G AGV +    GGG   +    PF D+F                 G R RR    
Sbjct:    67 QYDQFGHAGVGAGGFSGGGFGGFGAGTPFGDIF----GDIFGDIFGGRPRGSRGRR---- 118

Query:   193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
               G+DL+Y++ L F E+ FGAEKE ++ + + C  C G+GAK G++ ++C TC G GQV 
Sbjct:   119 --GDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQV- 175

Query:   253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
             R  Q   G FS    C  C GEG V+   C  C G G IR  K + VKVP GV TG+ L+
Sbjct:   176 RFQQ---GFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRLK 232

Query:   313 VVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
             +              DLYV + V E P   R+  D+   I +S++ A +G  ++V T++G
Sbjct:   233 LSGEGGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLDG 292

Query:   373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 419
                +++P GTQ G +  L  KG P+L     RGD L  +KV  P+ +
Sbjct:   293 KVSMKIPEGTQSGRIFRLRGKGVPQLQGYG-RGDQLVIIKVETPSNL 338

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P95830 dnaJ "Chaperone protein DnaJ" [Streptococcus pneumoniae TIGR4 (taxid:170187)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 132/342 (38%), Positives = 179/342 (52%)

Query:    78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
             ++Y  LGV K+AS  EIK AYRKL+++YHPD+NKEPGA +K+KE+  AYE LSDD+KRA 
Sbjct:     5 EFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAA 64

Query:   138 YDQYGEAGVKSTVGG--GSSAYT-TNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTK 194
             YDQYG AG     GG  G   +     F  FE                G  +R  +   +
Sbjct:    65 YDQYGAAGANGGFGGAGGFGGFNGAGGFGGFEDIFSSFFGG-------GGSSRNPNAPRQ 117

Query:   195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
             G+DL+Y + L F E+IFG EKE +      C  C G+GAK G+    C  C G G +   
Sbjct:   118 GDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVD 177

Query:   255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 314
              QTP G+  +   C  C G G+ I   C  C G G  +   ++ VK+P GV TG  +R+ 
Sbjct:   178 TQTPLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLA 237

Query:   315 XXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 374
                          DLYV + VE     +R+G  +F  ++++++ A +G  V + TV G  
Sbjct:   238 GQGEAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDV 297

Query:   375 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 416
             EL +P GTQ G    L  KGAP L   ++ GD   TV V  P
Sbjct:   298 ELVIPEGTQTGKKFRLRSKGAPSLRGGAV-GDQYVTVNVVTP 338

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|DET_1398 DET_1398 "co-chaperone protein DnaJ" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 125/342 (36%), Positives = 188/342 (54%)

Query:    78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
             DYY  LG+ +SAS ++IK A+RK+A ++HPD N E GA EKFKEI+ AYEVLS+ +KRA 
Sbjct:     6 DYYEVLGIERSASDEDIKKAFRKMAMKHHPDRNHEDGAAEKFKEINEAYEVLSNPEKRAA 65

Query:   138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGED 197
             YD++G          GS A+    F+ F+               T  ++ +R    +G D
Sbjct:    66 YDRFG-------FSAGSDAFGQGGFENFDFGGLGSIFETFFGGAT--QSAKRGP-RRGPD 115

Query:   198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
             + YDI +   E+  G EKE     LE C  C+GTGAK G+ +  C+ C G GQV +  ++
Sbjct:   116 MSYDIRITLEEAATGVEKEITTERLEYCSECSGTGAKAGTSLVKCTNCNGTGQVYQVQKS 175

Query:   258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXXX 317
              FG F+ V+ CP C GEG +I E C KC G G+  +K+ ++VK+P GV+ G+ +R+    
Sbjct:   176 VFGRFTSVTPCPKCRGEGTIIGEPCAKCRGTGKEYVKRTVQVKIPAGVADGNQIRLNGYG 235

Query:   318 XXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
                       D+Y+ + +      +RDG D+   + I++  A +GT V V  +    +L+
Sbjct:   236 GVGDKGASAGDVYINVSIASHADFKRDGDDVIYELEINFAQAALGTEVNVPGLSTSHKLK 295

Query:   378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 419
             +P G+Q G   VL  KG P LN+    GD +  + V  P ++
Sbjct:   296 IPSGSQNGKYFVLKGKGIPHLNRFG-SGDEMVHLNVVTPEKL 336

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P08622 dnaJ [Escherichia coli K-12 (taxid:83333)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 130/344 (37%), Positives = 187/344 (54%)

Query:    75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
             A  DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +
Sbjct:     2 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 61

Query:   134 KRAMYDQYGEAGVKST-VGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTV 192
             KRA YDQYG A  +   +GGG      +  D+F                 G R R+R+  
Sbjct:    62 KRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFG--------GGRGRQRAA- 112

Query:   193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
              +G DLRY++ L   E++ G  KE  +  LE C+VC G+GAK G++ + C TC G GQV 
Sbjct:   113 -RGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQV- 170

Query:   253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
                Q   G F+    CP C G G +I + C KC G GR+   K + VK+P GV TG  +R
Sbjct:   171 ---QMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIR 227

Query:   313 VVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
             +              DLYV + V++ P  +R+G +L+  + I++  A +G  ++V T++G
Sbjct:   228 LAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDG 287

Query:   373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 416
               +L+VP  TQ G +  +  KG   + +   +GD L  V V  P
Sbjct:   288 RVKLKVPGETQTGKLFRMRGKGVKSV-RGGAQGDLLCRVVVETP 330

GO:0003756 "protein disulfide isomerase activity" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA;IMP

GO:0006457 "protein folding" evidence=IDA

GO:0042026 "protein refolding" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IEA;IDA

GO:0016020 "membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0006260 "DNA replication" evidence=IEA;IMP

GO:0009408 "response to heat" evidence=IEA;IEP

GO:0046872 "metal ion binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0043335 "protein unfolding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B0JW23	DNAJ_MICAN	No assigned EC number	0.5333	0.7114	0.9491	yes	no
B1WVR2	DNAJ_CYAA5	No assigned EC number	0.5346	0.7054	0.9361	yes	no
Q2JH49	DNAJ_SYNJB	No assigned EC number	0.5161	0.6893	0.8730	yes	no
Q7VEJ6	DNAJ_PROMA	No assigned EC number	0.5112	0.6993	0.9232	yes	no
B7KEJ8	DNAJ_CYAP7	No assigned EC number	0.5598	0.7074	0.9413	yes	no
Q7NDG8	DNAJ_GLOVI	No assigned EC number	0.5251	0.7154	0.9321	yes	no
B7JY68	DNAJ_CYAP8	No assigned EC number	0.5277	0.7094	0.944	yes	no
B0CAZ0	DNAJ_ACAM1	No assigned EC number	0.5431	0.7014	0.9358	yes	no
Q2JW78	DNAJ_SYNJA	No assigned EC number	0.5295	0.6893	0.8730	yes	no
Q8DKR7	DNAJ_THEEB	No assigned EC number	0.5509	0.6913	0.9249	yes	no
Q7V9C8	DNAJ_PROMM	No assigned EC number	0.5069	0.7154	0.9444	yes	no
Q8YUA5	DNAJ_NOSS1	No assigned EC number	0.5150	0.7174	0.9521	yes	no
Q114R3	DNAJ_TRIEI	No assigned EC number	0.5192	0.7114	0.9491	yes	no
B8HLD2	DNAJ_CYAP4	No assigned EC number	0.5391	0.7034	0.9385	yes	no
B1XQF6	DNAJ_SYNP2	No assigned EC number	0.5273	0.7254	0.9576	yes	no
Q5N0G1	DNAJ_SYNP6	No assigned EC number	0.5094	0.6933	0.9202	yes	no
B2J3J3	DNAJ_NOSP7	No assigned EC number	0.5095	0.7154	0.952	yes	no
Q3MG81	DNAJ_ANAVT	No assigned EC number	0.5150	0.7174	0.9521	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	499
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-177
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-175
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-147
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-132
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	1e-118
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-111
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-109
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-109
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	1e-107
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-105
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	1e-105
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-103
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	1e-102
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-100
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-100
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	1e-97
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	1e-93
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-93
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	3e-91
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	5e-91
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-90
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-85
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	2e-84
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	8e-83
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	5e-77
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-75
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-63
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	3e-54
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	3e-51
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	4e-50
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	6e-50
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	6e-40
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-32
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	2e-26
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	5e-26
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	9e-26
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-23
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	3e-23
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	2e-20
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	4e-20
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	9e-12
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	2e-11
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	3e-10
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	4e-10
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	5e-06
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	8e-06
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	5e-05
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	9e-05
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	3e-04
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	6e-04
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.001
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.001

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  503 bits (1297), Expect = e-177
 Identities = 202/358 (56%), Positives = 246/358 (68%), Gaps = 5/358 (1%)

Query: 77  GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA 136
            DYY  LGV + A   E+K AYR+LAR+YHPDVNKEPGA ++FKEI+ AYEVLSD + RA
Sbjct: 3   ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRA 62

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 196
            YDQ+GEAGV    G           D+FETFF     GF G    G R RRR    +G+
Sbjct: 63  RYDQFGEAGVSGAAGFPDMGDMGGFADIFETFFS----GFGGAGGQGGRRRRRGP-QRGD 117

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 256
           DLRYD+ L+F E+IFG EKE  + HLETCE C G+GAK G+    CSTCGG GQV R  +
Sbjct: 118 DLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATR 177

Query: 257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
           TPFG F+QVS CP+C G G+VI + C  C G+G  ++ K +K+ +P GV TG+ LRV GE
Sbjct: 178 TPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGE 237

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 376
           GDAG RGGPPGDLYVYL V+  P  +RDGI++ S I ISYL AI+G  ++V TV+G  EL
Sbjct: 238 GDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVEL 297

Query: 377 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
            +P GTQP  VL L  KG P+L  P  RGDHL TVKV IP RIS +ERELLE+LA ++
Sbjct: 298 TIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK 355

Length = 374

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  496 bits (1279), Expect = e-175
 Identities = 183/360 (50%), Positives = 228/360 (63%), Gaps = 9/360 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV K AS +EIK AYRKLA++YHPD NK+  A EKFKEI+ AYEVLSD +KRA 
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60

Query: 138 YDQYGEAGVKSTVGGGSSAY---TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 194
           YDQ+G AG     GGG   +       F  F   FG   GG  G        RRRS   +
Sbjct: 61  YDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGGG-----SGRRRRSGPRR 115

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
           GEDLRYD+ L F E++FG EKE E+   E+CE C GTGAK G+  + C TCGG GQV R 
Sbjct: 116 GEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQ 175

Query: 255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 314
             TPFG F Q   CP+CGGEG++I E C  C G+GR++ +K I VK+P GV TG  LRV 
Sbjct: 176 QGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS 235

Query: 315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 374
           G+G+AG  GGP GDLYV + V+     +RDG DL+  + IS+  AI+G  ++V T++G  
Sbjct: 236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDV 295

Query: 375 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
           +L++P GTQ G V  L  KG P+L     RGD L TVKV  P  +S +++ELLEELA   
Sbjct: 296 KLKIPAGTQSGTVFRLKGKGVPRLRGNG-RGDLLVTVKVETPKNLSKEQKELLEELAEAS 354

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  425 bits (1095), Expect = e-147
 Identities = 165/361 (45%), Positives = 223/361 (61%), Gaps = 16/361 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGV K AS +EIK AYRKLA++YHPD N  +  A EKFKEI+ AYEVLSD +KRA
Sbjct: 5   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRA 64

Query: 137 MYDQYGEAGVKSTVGGGS--SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 194
            YDQ+G AG K+   GG     +  +  D+FE FFG   GG       G   RR +   +
Sbjct: 65  AYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFG---GG-------GGGRRRPNRPRR 114

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
           G DLRY++ +   E++FG +KE  ++   TC  C G+GAK G+  + C TC G GQV   
Sbjct: 115 GADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTV 174

Query: 255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 314
            +T F  FS    CP+C G G++I + C KC G+GR++ KK+I V +P GV  G  +R+ 
Sbjct: 175 QRTGF--FSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLS 232

Query: 315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 374
           GEG+AGP GGP GDLYV++ V+  P  +RDG DL+  + IS+ +A +G  ++V T++G  
Sbjct: 233 GEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRV 292

Query: 375 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 434
           +L++P GTQ G+V  L  KG PKL     RGD    VKV  P  +S +++ELLEE A   
Sbjct: 293 KLKIPAGTQTGEVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351

Query: 435 N 435
            
Sbjct: 352 G 352

Length = 371

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  387 bits (997), Expect = e-132
 Identities = 158/372 (42%), Positives = 215/372 (57%), Gaps = 17/372 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGV ++AS  EIK AYRKLA +YHPD N  +  A EKFKEI  AYEVLSD +KRA
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 196
            YDQYG A  +   GGG         D+F   FG   GG  G          R    +G 
Sbjct: 65  AYDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGRG--------GGRQRARRGA 116

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 256
           DLRY++ +   E++ G  KE  +  L TC+ C G+GAK G+  + C TC G GQV R  Q
Sbjct: 117 DLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQV-RMQQ 175

Query: 257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
              G F+    CP+C G G++I + C+KC G+GR+  +K + VK+P GV TG  +R+ GE
Sbjct: 176 ---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGE 232

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 376
           G+AG RGGP GDLYV + V+E P  +RDG DL+  + IS+  A +G  ++V T++G  +L
Sbjct: 233 GEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKL 292

Query: 377 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 436
           ++P GTQ G +  L  KG   +     RGD    V V  P  ++ +++ELLEE      +
Sbjct: 293 KIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFE---ES 348

Query: 437 TGSRTRTRPKTQ 448
             S  +  PK++
Sbjct: 349 FESGEKHSPKSK 360

Length = 371

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  350 bits (901), Expect = e-118
 Identities = 176/376 (46%), Positives = 229/376 (60%), Gaps = 23/376 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG---ATEKFKEISAAYEVLSDDKK 134
           DYY  LGV + AS +EIK +YRKLA +YHPD N  PG   A E FKE + AYEVLSD KK
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRN--PGDKEAEELFKEAAEAYEVLSDPKK 62

Query: 135 RAMYDQYGEAGVKSTVGGGSSAYTT--NPF-DLFETFFGPSMGGFPGMNQTGFRTRRRST 191
           R +YDQYG  G+  T   G S +    + F D+FE FFG   G          R R R+ 
Sbjct: 63  RGIYDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGGR---------RGRSRTA 113

Query: 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 251
           V  G DLRYD+ L F E+ FG EKE  +  LETCE C G+G + G+    C  CGG GQV
Sbjct: 114 VRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQV 173

Query: 252 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
            ++     G FS  + CP C G G+VI   C+ C G+GR+R+ K ++VK+P GV TGS L
Sbjct: 174 TQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRL 229

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 371
           R+ GEG+AG RGGPPGDLYV+L VE     +RDG D+   + IS++ A +G  ++V T+E
Sbjct: 230 RLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLE 289

Query: 372 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
           G  EL++P GTQPGD+     KG P L +   RGD +  V+V +P R++ K+ ELL E A
Sbjct: 290 GERELKIPKGTQPGDIFRFKGKGIPSL-RGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA 348

Query: 432 SLRN-TTGSRTRTRPK 446
            L +   G++ R   K
Sbjct: 349 RLESEKIGNKLRNLFK 364

Length = 366

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  333 bits (855), Expect = e-111
 Identities = 162/363 (44%), Positives = 212/363 (58%), Gaps = 21/363 (5%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD+KRA 
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQ 64

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRTRRRS 190
           YDQ+G AG     GGG   +    F       D+F +FFG            G R R  +
Sbjct: 65  YDQFGHAGPNQGFGGG--GFGGGDFGGGFGFEDIFSSFFG-----------GGGRRRDPN 111

Query: 191 TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQ 250
              +G DL+Y + L F E++FG EKE E+   ETC+ C G+GAK G+    CS CGG GQ
Sbjct: 112 APRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQ 171

Query: 251 VMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI 310
           V     TPFG       CP C G G+ I E C  C G+G++R +K I VK+P GV  G  
Sbjct: 172 VSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQ 231

Query: 311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV 370
           +RV GEG+ G  GGP GDLYV   V      +RDG D++  + +++  A +G  ++V T+
Sbjct: 232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTL 291

Query: 371 EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 430
            G  +L++P GTQ G    L  KG P +     +GD    V+V  P +++ +++ELL E 
Sbjct: 292 HGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYG-QGDQYVVVRVVTPTKLTDRQKELLREF 350

Query: 431 ASL 433
           A L
Sbjct: 351 AEL 353

Length = 376

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  329 bits (846), Expect = e-109
 Identities = 156/383 (40%), Positives = 220/383 (57%), Gaps = 32/383 (8%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG---ATEKFKEISAAYEVLSDDKK 134
           DYY  LGV ++A+ +EIK AYR+LA++YHPD+N  PG   A +KFKEI+ AYE+LSD +K
Sbjct: 6   DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGDKEAEQKFKEINEAYEILSDPQK 63

Query: 135 RAMYDQYGEA----GVKSTVGGGSSAYTTNPFD--------LFETFFGPSMGGFPGMNQT 182
           RA YDQ+G A    G     G G   +    FD        +FE  FG            
Sbjct: 64  RAQYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFG-----------D 112

Query: 183 GFRTRRRSTVT---KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKM 239
            F T RR   T   KG D+RYD+ L F E+ FG EKE E+   E C+VC G+GAK GSK 
Sbjct: 113 FFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKP 172

Query: 240 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKV 299
             C  C G GQV     TPFG    +  C  C GEG++I++ C KC G GRIR ++ IKV
Sbjct: 173 VTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKV 232

Query: 300 KVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDA 359
            +P G+  G ++ + GEG+ G +GGP GDLY+ + V+  P  +R+G +++  + I++ DA
Sbjct: 233 NIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDA 292

Query: 360 IMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 419
            +G  +++ T++G  +  +P GTQ G    L  KG P L     RGD +  V + +P ++
Sbjct: 293 ALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKL 351

Query: 420 SAKERELLEELASLRNTTGSRTR 442
           + K++ELL E   L    G+ +R
Sbjct: 352 TEKQKELLREFEKLSGEEGTESR 374

Length = 386

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  327 bits (841), Expect = e-109
 Identities = 153/358 (42%), Positives = 203/358 (56%), Gaps = 12/358 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           +YY  LGV K AS  EIK AYRKL+++YHPD+NKEPGA EK+KE+  AYE LSD +KRA 
Sbjct: 5   EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAA 64

Query: 138 YDQYGEAGVKSTVGGGSSAY----TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 193
           YDQYG AG     GGG+  +     +  F  FE  F    GG       G   R  +   
Sbjct: 65  YDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFFGG-------GGARRNPNAPR 117

Query: 194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 253
           +G+DL+Y + L+F E+IFG EKE   +   TC  C G+GAK G+    C  C G G +  
Sbjct: 118 QGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITV 177

Query: 254 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 313
             QTP G+  +   C  C G G+ I E C+ C G G  +    + VK+P GV TG  +R+
Sbjct: 178 DTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRL 237

Query: 314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 373
            G+G+AG  GGP GDLYV   VE     +RDG  ++ T+ IS++ A +G  V+V TV G 
Sbjct: 238 QGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD 297

Query: 374 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
            EL++P GTQ G    L  KGAPKL      GD   TV +  P +++  ++E L+  A
Sbjct: 298 VELKIPAGTQTGKKFRLRGKGAPKLRGGGN-GDQHVTVNIVTPTKLNDAQKEALKAFA 354

Length = 380

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  322 bits (827), Expect = e-107
 Identities = 157/357 (43%), Positives = 214/357 (59%), Gaps = 7/357 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV ++A  KEIK AYRKLAR+YHPDV++E GA EKFKEIS AY VLSDD+KR  
Sbjct: 6   DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQR 65

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGM-NQTGFRTRRRSTVTKGE 196
           YDQ+G AG+     G S     N  + FE  F     G   + +  GF    R    +G 
Sbjct: 66  YDQFGHAGMD----GFSQEDIFNNIN-FEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGA 120

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 256
           D+  ++ +   E+  G EK+ ++ H + C VC G+ A+ GS+++ C TCGG GQV +   
Sbjct: 121 DIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRN 180

Query: 257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
           T  G    V+ CP C GEG+++ + C  C G+G +R  K I VK+P GV TGS LRV GE
Sbjct: 181 TILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGE 240

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 376
           G+ G RGG PGDLYV + V+     +R+G +L+    IS++ A +G  V V T++G  EL
Sbjct: 241 GEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVEL 300

Query: 377 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 433
           ++P GTQ G    L   G P L   S +G+    VKV +P ++S K++ELL E AS+
Sbjct: 301 KIPAGTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI 356

Length = 378

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  318 bits (817), Expect = e-105
 Identities = 161/361 (44%), Positives = 217/361 (60%), Gaps = 18/361 (4%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           AS DYY  LG+ K AS  EIK A+RKLA +YHPD NK    A EKFKEI+ AY+VLSD +
Sbjct: 2   ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ 61

Query: 134 KRAMYDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRT 186
           K+A YDQ+G A      G GS  +    F       D+F++FFG   GGF      G  +
Sbjct: 62  KKAQYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFG---GGF------GSSS 112

Query: 187 RRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCG 246
           RRR+   +G D+ Y I L F E++FG EKE  ++  E CE C GTGAK G+  + C  CG
Sbjct: 113 RRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCG 172

Query: 247 GRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS 306
           G GQ+     TP G F   + C  CGG G+VI + C KC G+G++R  + IKV VP GV 
Sbjct: 173 GTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVD 232

Query: 307 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVK 366
           TG+++ + G+G+ G  GGP GDLY+ + V      +R G D++    IS+  A +GT +K
Sbjct: 233 TGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIK 292

Query: 367 VKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKEREL 426
           V TV+G  + +VP GTQPG V  L  KG P++N    RG+   TV V IP ++++K++E 
Sbjct: 293 VPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTG-RGNQYVTVIVDIPKKLNSKQKEA 351

Query: 427 L 427
           L
Sbjct: 352 L 352

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  317 bits (814), Expect = e-105
 Identities = 155/374 (41%), Positives = 211/374 (56%), Gaps = 25/374 (6%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDD 132
              DYY  LGV ++A+ +EIK AY++L +++HPD + E    A +KFKEI  AYEVLSD 
Sbjct: 2   EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDP 61

Query: 133 KKRAMYDQYG---EAGVKSTVGGGSSAYT------TNPF--DLFETFFGPSMGGFPGMNQ 181
           +KRAMYD++G   E         G   +        N F  D+F+ FFG          +
Sbjct: 62  QKRAMYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFG----------E 111

Query: 182 TGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRI 241
              +  +R    +GED+RY+I +  S+ I GAE   E    ETC  C GTG + GS    
Sbjct: 112 RRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVT 171

Query: 242 CSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKV 301
           C  C G G++    ++ FG+F     C  CGG G++  EYC +C G GRIR +    VK+
Sbjct: 172 CPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKI 231

Query: 302 PPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIM 361
           P GV  G++LR+ G G+AG  GGP GDLYV + V   P  +R G DL   ++I YL AI+
Sbjct: 232 PAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAIL 291

Query: 362 GTVVKVKTVEG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIS 420
           GT V+V   EG  + L++PPGTQP  V  L  KG P + +   RGD +  V V IP R+S
Sbjct: 292 GTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNM-RYGRRGDLIVNVHVEIPKRLS 350

Query: 421 AKERELLEELASLR 434
            +ER+LL+ELA  R
Sbjct: 351 REERKLLKELAKKR 364

Length = 369

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  313 bits (803), Expect = e-103
 Identities = 156/362 (43%), Positives = 207/362 (57%), Gaps = 18/362 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LG+ K AS ++IK AYRKLA +YHPD NKEP A EKFKEIS AY VLSD +KRA 
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQ 65

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 193
           YD++G AG+ +        +    F    D+FE FFG            G   R R    
Sbjct: 66  YDRFGHAGIDNQYSA-EDIFRGADFGGFGDIFEMFFG------------GGGRRGRMGPR 112

Query: 194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 253
           +G DLRYD+ +   E+ FG  K+ ++   E C  C+GTGAK G+  + C TCGG GQV  
Sbjct: 113 RGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTT 172

Query: 254 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 313
           T  TP G F   + C +C G G+VI   C  CSG G++R  + I V VP G  +G  L++
Sbjct: 173 TRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL 232

Query: 314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 373
            GEG+AG  G P GDLY+ L V+E    +R G D+ S I IS+  A +G  + V T+ G 
Sbjct: 233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK 292

Query: 374 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 433
            ++ +PPGTQ   V  L  KG P+L+    +GD L  V V  P +++ +++ELL E   L
Sbjct: 293 VKMNIPPGTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDEL 351

Query: 434 RN 435
            N
Sbjct: 352 SN 353

Length = 377

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  311 bits (798), Expect = e-102
 Identities = 152/361 (42%), Positives = 201/361 (55%), Gaps = 17/361 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV ++AS  EIK AYRKLAR+ HPDVN +  A EKFKEIS AYEVLSD +KR +
Sbjct: 4   DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRI 63

Query: 138 YDQYG---EAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 194
            D  G   E+      GGG         D+FE FFG            G R R    V  
Sbjct: 64  VDLGGDPLESAGGG--GGGFGGGFGGLGDVFEAFFGGGAA------SRGPRGR----VRP 111

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
           G D    + L+  E   G  K+  +     C+ C G G    SK   C TCGGRG+V   
Sbjct: 112 GSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTV 171

Query: 255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 314
            ++  G       CP+C G GEVI + C +C+G+GR+R ++ I VK+P GV  G  +R+ 
Sbjct: 172 QRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLA 231

Query: 315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV-EGI 373
            +G+ GP GGP GDLYV +  +      RDG DL  T+S+  +DA +GT V V+ + +G 
Sbjct: 232 AQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGP 291

Query: 374 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 433
           SE+ +PPGTQPG V+ L  +G P L +   RGD    V+V +P R+  ++ ELL EL +L
Sbjct: 292 SEITIPPGTQPGSVITLRGRGMPHL-RSGGRGDLHAHVEVVVPTRLDHEDIELLRELKAL 350

Query: 434 R 434
           R
Sbjct: 351 R 351

Length = 378

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  305 bits (784), Expect = e-100
 Identities = 149/375 (39%), Positives = 215/375 (57%), Gaps = 27/375 (7%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV ++A+ +EIK AYR+LAR+YHPD NK P A EKFKEI+ AY+VLSD +KR +
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKL 63

Query: 138 YDQYGEAGVKS--TVGGGSSAYTTNPF----DLFETF---FGPSMGGFPGMNQTGFRTRR 188
           YDQ+G A          G   ++        D+ E     FG     F     T  R + 
Sbjct: 64  YDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFG-DIFGRRRATRERRKT 122

Query: 189 RSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGR 248
                KGED+   + +   E+  G     E+     CE C GTG   GS  ++C TCGG 
Sbjct: 123 YQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGS 182

Query: 249 GQVMRTDQTPFGLFSQVS-VCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST 307
           G++ +      G F ++S  CP+CGGEG V+ E C KC+G G +  K+ IKV++PPGV  
Sbjct: 183 GEIYQR-----GGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVDN 236

Query: 308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKV 367
           GS LRV G+G AG  GGPPGDLY+ + V+  P  +R G +L+  ++I+  +A++GT ++V
Sbjct: 237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEV 296

Query: 368 KTVEGISE-LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP--NRISA--- 421
             ++G  E +++PPGT+ GD + +  KG P+L K S  GD +  V + +P  + +S    
Sbjct: 297 PLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRL-KGSGYGDLVVRVHIDVPKISMLSKLMG 355

Query: 422 ---KERELLEELASL 433
              K ++LL+EL  L
Sbjct: 356 DGKKAKKLLKELDKL 370

Length = 382

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  305 bits (782), Expect = e-100
 Identities = 154/361 (42%), Positives = 202/361 (55%), Gaps = 20/361 (5%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVN-KEPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGV + AS  EIK AYRKLA QYHPD N   P A +KFKE + AYEVL D +KRA
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRSTV 192
            YD++G AGV    G G  +   + F    D+F   FG S GG          +RR    
Sbjct: 65  RYDRFGHAGVNGNGGFGGFSSAEDIFSHFSDIFGDLFGFSGGG----------SRRGPRP 114

Query: 193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
             G DLRY++ + F ++  G E    +    TC+ C G+GA  G+    C  CGG GQV 
Sbjct: 115 QAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVR 174

Query: 253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
           ++     G F     CP C GEG VI+  C KC G G ++  + +KV++P GV TGS LR
Sbjct: 175 QSQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLR 230

Query: 313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
           + GEG+ G  GGPPGDLYV + VE+    QR G DL  T  IS++ A +G  ++V T++ 
Sbjct: 231 LRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD 290

Query: 373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 432
              L +P GTQ G+V  L  KG P L   S +GD L  V V  P +++ ++ ELL E  +
Sbjct: 291 PVTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEA 349

Query: 433 L 433
           L
Sbjct: 350 L 350

Length = 373

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  300 bits (769), Expect = 1e-97
 Identities = 155/373 (41%), Positives = 205/373 (54%), Gaps = 27/373 (7%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG---ATEKFKEISAAYEVLSDDKK 134
           DYY  LGV +SA   EIK AYRKLA +YHPD  K P    A E FKE++ AYEVLS+D K
Sbjct: 4   DYYEVLGVSRSADKDEIKKAYRKLALKYHPD--KNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 135 RAMYDQYGEAGVKSTVG-GGSSAYTTNPFDL------FETFFGPSMGGFPGMNQTGF--- 184
           R  YDQ+G AGV S+   GG   Y     D       F   FG       G +  GF   
Sbjct: 62  RRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGG-ARRGGGSPFGFEDV 120

Query: 185 -----RTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKM 239
                R RR S    G DL+  + L   E   G EK  ++     C+ C GTG+K G   
Sbjct: 121 FGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTG-AT 179

Query: 240 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKV 299
             C TC G G+V +  +T FG F  ++ CP+CGGEG V+ + C  C GEG  + +  +KV
Sbjct: 180 ETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV 239

Query: 300 KVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDLFSTISISYL 357
            VP GV  G+ L + G+G+AGPRGG PGDL V   +EE P     R+G D+   +++SY 
Sbjct: 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVV--IEEKPHELFVRNGDDVIYNLAVSYP 297

Query: 358 DAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPN 417
           D ++GT V+V T++G  +L +P GTQP  +L +  KG   L     RGD    V V +P 
Sbjct: 298 DLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG-RGDQYVRVNVFVPK 356

Query: 418 RISAKERELLEEL 430
            +S +++ELL+EL
Sbjct: 357 EVSHQDKELLKEL 369

Length = 397

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  288 bits (739), Expect = 1e-93
 Identities = 150/356 (42%), Positives = 208/356 (58%), Gaps = 12/356 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV ++AS  E+K AYRKLAR+YHPDVNK P A +KFKE+  AY+ LSD +K+A 
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAH 64

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           YDQ+G        GGG +       D+F+ FFG   G            R  +   +G D
Sbjct: 65  YDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGG-----------RRNPNAPRQGAD 113

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 257
           L+Y + LEF E++FG E E E+   ETC  C G+GAK G+K   CS CGG GQ+     T
Sbjct: 114 LQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNT 173

Query: 258 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 317
           PFG      VC  C G G++I + C  C G+G++R +K I VKVP G+  G  LRV G+G
Sbjct: 174 PFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQG 233

Query: 318 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 377
           +AG  GGPPGDLYV  +V+     +RDG D++  + +++    +G  ++V T+ G  +L+
Sbjct: 234 EAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLK 293

Query: 378 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 433
           +P GTQ G    L  KG P ++    +GD    V+V  P  ++ KE+EL+ E A +
Sbjct: 294 IPAGTQTGTSFRLRGKGVPNVHGRG-QGDQHVQVRVVTPKNLTEKEKELMREFAGM 348

Length = 371

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  288 bits (739), Expect = 2e-93
 Identities = 151/372 (40%), Positives = 210/372 (56%), Gaps = 23/372 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG---ATEKFKEISAAYEVLSDDKK 134
           DYY  LGV K+AS +EIK AYRKLA +YHPD  K PG   A ++FKE+S AYEVLSD +K
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPD--KNPGDAEAEKRFKEVSEAYEVLSDAQK 59

Query: 135 RAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETF---FGPSMGG-------FPGMNQTGF 184
           R  YD+YG+ G  +  GG   A   N  D   TF   FG   GG         G     F
Sbjct: 60  RESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAF 119

Query: 185 RTRRRS-TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICS 243
             R       +G   +  I L F E+  G EKE  +S  ++C+ C+G+GA     +++C 
Sbjct: 120 GMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCD 179

Query: 244 TCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPP 303
            C G GQV+++     G FS  S CP CGGEG VI++ C  C G+GRI+ K+++ V +P 
Sbjct: 180 RCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPA 235

Query: 304 GVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGT 363
           GV +G  L++ G GDAG  G P GDLYV++DVE  P  +R G DL   + I ++DA +G 
Sbjct: 236 GVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGM 295

Query: 364 VVKVKTV--EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISA 421
             ++ T+  EG   L +P G Q G +L +  +G P ++    RGD L  + V  P  +S 
Sbjct: 296 KKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKG-RGDLLVRISVETPQNLSE 354

Query: 422 KERELLEELASL 433
           +++ELL + A+ 
Sbjct: 355 EQKELLRQFAAT 366

Length = 391

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  282 bits (723), Expect = 3e-91
 Identities = 164/375 (43%), Positives = 223/375 (59%), Gaps = 23/375 (6%)

Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAM 137
           YY  LGV KSA+ +EIK+AYRKLA +YHPD NK    + EKFKE + AYE+L D KKR  
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQA 65

Query: 138 YDQYGEAGVKSTVGG-GSSAYT--TNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRS 190
           YDQ+G+AGV +  GG G  AYT  ++ F    D+F  FFG   GG       G    RRS
Sbjct: 66  YDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGG-------GSGGGRRS 118

Query: 191 TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQ 250
              +G DLRY++ +   ++  G E + E+  LE+C  C G+GA  GS    C  CGG GQ
Sbjct: 119 GPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQ 178

Query: 251 VMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI 310
           + RT     G FS  + CP+C G+G VIS  C+ C G+G    ++ I +K+PPGV TGS 
Sbjct: 179 IRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSR 234

Query: 311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV 370
           L+V GEG+AGP GGP GDLYV   +++    +R G DL     IS   AI+G  ++V T+
Sbjct: 235 LKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTI 294

Query: 371 EG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEE 429
           +G  +++++P GT+ G V  L   G P L     +GD    VK+ IP +I+ ++REL+EE
Sbjct: 295 DGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYG-KGDQHVIVKIEIPKKITRRQRELIEE 353

Query: 430 LA--SLRNTTGSRTR 442
            A  S  N  GS+ +
Sbjct: 354 FARESGENIPGSKGK 368

Length = 372

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  281 bits (721), Expect = 5e-91
 Identities = 139/356 (39%), Positives = 196/356 (55%), Gaps = 14/356 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LGV ++AS  EIK+AYRKLA +YHPD NKE GA EKF +I+ AY VLSD +KRA 
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 138 YDQYGEAGVKSTVGGGS-SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 196
           YD++G A      GG        +P D+FE  FG       G    G R RR     +G+
Sbjct: 63  YDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQLFG-------GAGFGGGRGRRGP--ARGD 113

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMR-ICSTCGGRGQVMRTD 255
           DL  +  +   ++  G E E E+  L  CE C G+  + G K    C TC G G V    
Sbjct: 114 DLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQA 173

Query: 256 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 315
           +T FG+      CP+C GEG++I++ C  C G GR    + +KVK+P G+  G  +RV G
Sbjct: 174 RTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAG 233

Query: 316 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE 375
            G+ GP G   GDLYV++++E  P ++R+   L     I +  A +G  + V T++G   
Sbjct: 234 MGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQV 291

Query: 376 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
           ++V PGTQ GD+  L  +G P+L      GD +   ++ +P ++S + RE LE  A
Sbjct: 292 IEVKPGTQHGDLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEAREALEAYA 346

Length = 371

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  281 bits (721), Expect = 1e-90
 Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 13/366 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG---ATEKFKEISAAYEVLSDDKK 134
           DYY  LGV K+A+  EIK AYRK A QYHPD  K PG   A EKFKE + AY+VLSD  K
Sbjct: 6   DYYEVLGVSKTATVDEIKKAYRKKAIQYHPD--KNPGDKEAEEKFKEAAEAYDVLSDPDK 63

Query: 135 RAMYDQYGEAGVKSTVGGGS-SAYTTNPFDLFETF---FGPSMGGFPGMNQ-TGFRTRRR 189
           R+ YDQ+G AGV    GGG  S    +  D+F  F   FG   GGF G     G  +++R
Sbjct: 64  RSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQR 123

Query: 190 STVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRG 249
             V +G DLR  + L   E   G EK+F++     C  C GTGA+  +    C TC G G
Sbjct: 124 --VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSG 181

Query: 250 QVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGS 309
            V R   T  G     S CP+C GEG++I + C+KC GEG +  ++ I VK+P GV+ G 
Sbjct: 182 SVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM 241

Query: 310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKT 369
            L + G+G+AG  GG  GDL V ++ E  P + RD  DL   + +S   A +G  V+V T
Sbjct: 242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPT 301

Query: 370 VEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEE 429
           ++G +++++  GTQPG VL L  KG P +N     GD L  V V IP  +S +E++ LE+
Sbjct: 302 IDGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYG-TGDLLVNVSVYIPETLSKEEKQTLEK 360

Query: 430 LASLRN 435
           + +  N
Sbjct: 361 MENSDN 366

Length = 386

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  268 bits (686), Expect = 2e-85
 Identities = 154/366 (42%), Positives = 206/366 (56%), Gaps = 23/366 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGVPK A+  EIK AYRKLAR+YHPD NK +  A E+FKEIS AY+VLSD+KKR 
Sbjct: 10  DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69

Query: 137 MYDQ----YGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGF-------- 184
            YD+    +G  G +   GGG        FDL + F G + GG       G         
Sbjct: 70  EYDEARSLFGNGGFRPGPGGGGGG--GFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLF 127

Query: 185 -RTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICS 243
            R  RR+   +G D+  ++ L F+E+I GA     L+    C  C+GTGAK G+  R+C 
Sbjct: 128 NRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCP 187

Query: 244 TCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPP 303
           TC G GQV R      G FS    CP C G G +  + C  C G GR +  + ++V++P 
Sbjct: 188 TCSGTGQVSRN----SGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA 243

Query: 304 GVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGT 363
           GVS G  +R+ G+G  G RGGP GDLYV + V+  P   R G +L  T+ +++ +A +G 
Sbjct: 244 GVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGA 303

Query: 364 VVKVKTVEGIS-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAK 422
            V+V T+ G    +++PPGT  G VL +  KGA +  K   RGD L TV+V +P  +S K
Sbjct: 304 EVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVR--KDGTRGDLLVTVEVAVPKDLSGK 361

Query: 423 ERELLE 428
            RE LE
Sbjct: 362 AREALE 367

Length = 389

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  264 bits (677), Expect = 2e-84
 Identities = 133/375 (35%), Positives = 199/375 (53%), Gaps = 27/375 (7%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKK 134
              DYY  LGV K+AS +EI+ AYRKLA+QYHPD+NK P A +K  EI+ A +VL D  K
Sbjct: 2   KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDK 61

Query: 135 RAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQT---------GFR 185
           R  YDQ+G A        GSS +++N F  FE  F  +MG     + T            
Sbjct: 62  RKQYDQFGHAAFD-----GSSGFSSN-FGDFEDLFS-NMGSSGFSSFTNIFSDFFGSNKS 114

Query: 186 TRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTC 245
             +RST  KG+ +  DI L F E +FG +K  EL  L  C  C G+GA+  S + IC+ C
Sbjct: 115 DYQRST--KGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNC 172

Query: 246 GGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGV 305
            G G+V+      F  F Q + C  C G G++I   C+ C G+G+   +K I+V +P G+
Sbjct: 173 HGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGI 232

Query: 306 STGSILRVVGEGDAGPRGGPPGDLYVYL-----DVEEIPGIQRDGIDLFSTISISYLDAI 360
                +++  +G A    G  GDL + +      V EI     +  D+  T +ISYLDAI
Sbjct: 233 RPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEII----NNNDILMTYNISYLDAI 288

Query: 361 MGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIS 420
           +G  + +KT++G  + ++P      +++++  KG  K      RGD +  V + +P  +S
Sbjct: 289 LGNEIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLS 348

Query: 421 AKERELLEELASLRN 435
            KE+EL+E++    +
Sbjct: 349 KKEKELIEQIYEQTS 363

Length = 372

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  261 bits (667), Expect = 8e-83
 Identities = 140/360 (38%), Positives = 202/360 (56%), Gaps = 17/360 (4%)

Query: 76  SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
           S DYY  LGV K+AS  ++K AY KLA+QYHPD      A +KFKEI+AAY+VL D++KR
Sbjct: 2   SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKR 61

Query: 136 AMYDQYGEAGVKSTV----GGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRST 191
           A YD++G    ++      GG    +  +  D+F  FF   MGG         R+R  S+
Sbjct: 62  AAYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGG-------SRRSRPTSS 114

Query: 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 251
             +G DL+Y++ +   E+  G EK    S    C+ C G+G++ G  +  C  C G G  
Sbjct: 115 KVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG-A 173

Query: 252 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
            R  Q   G F+    C  C G G++I   C+KC G GR   ++N+ V +P GV  G+ +
Sbjct: 174 TRMQQ---GFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 371
           R  GEG+AG RGG  GDLYV + ++     + DG +L   + IS+++A +G  ++V  +E
Sbjct: 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIE 290

Query: 372 GIS-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 430
           G    L +P GTQ GD L L  KG  K+ + +IRGD L  + V +P  +S ++RELLEE 
Sbjct: 291 GGKVNLTIPAGTQNGDQLRLRSKGMSKM-RSTIRGDMLTHIHVEVPKNLSKRQRELLEEF 349

Length = 372

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  246 bits (630), Expect = 5e-77
 Identities = 136/380 (35%), Positives = 192/380 (50%), Gaps = 25/380 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           D+Y  LGV   AS +EIK AYRKLAR+ HPD N  +P A E+FK +S A++VLSD  KR 
Sbjct: 10  DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69

Query: 137 MYDQY-----------GEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGG-------FPG 178
            YD+                     GG  +      F+L + F     GG       F G
Sbjct: 70  EYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGG 129

Query: 179 MNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSK 238
           +   G  + R S   +G DL  +  L+F E+  G      L+    C  C G+GA+ G+ 
Sbjct: 130 LFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTS 189

Query: 239 MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIK 298
            ++C TC G G + R +Q  FG FS+   C  C G G +I + C +C G G     + I 
Sbjct: 190 PKVCPTCNGSGVISR-NQGAFG-FSEP--CTDCRGTGSIIEDPCEECKGTGVTTRTRTIN 245

Query: 299 VKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLD 358
           V++PPGV  G  +R+ G+G+AG RG P GDLYV + V       RDG DL  T+ +S+ +
Sbjct: 246 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTE 305

Query: 359 AIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR 418
             +G+ + V T++G   ++VP GT  G +L +  +G PK  +    GD L TVKV +P  
Sbjct: 306 LALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPK--RSGGAGDLLVTVKVAVPPN 363

Query: 419 ISAKERELLEELASLRNTTG 438
           +     E LE  A     +G
Sbjct: 364 LDGAAAEALEAYAEAERASG 383

Length = 392

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  241 bits (617), Expect = 1e-75
 Identities = 139/364 (38%), Positives = 196/364 (53%), Gaps = 25/364 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKR 135
           DYY  LGV ++AS ++IK A+R+LA+++HPD++      A EKFKEIS AYEVLSD +KR
Sbjct: 4   DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKR 63

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRTRR 188
             YDQ G        G G S +  + F       D+F   FG   G F     +GF   +
Sbjct: 64  RQYDQTG----TVDFGAGGSNFNWDNFTHFSDINDIFNQIFG---GNFGSDFFSGF-GNQ 115

Query: 189 RSTVTKGEDL--RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCG 246
           +ST     D+    DI LE  ++ +G EK  +      C  C+GTGAK G K+  C TC 
Sbjct: 116 QSTRNIDLDIYTNLDISLE--DAYYGTEKRIKYRRNAMCPDCSGTGAKNG-KLITCPTCH 172

Query: 247 GRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS 306
           G GQ        F     V+ C +CGG G +  E C +C+G G + + ++I VK+P G +
Sbjct: 173 GTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGAT 232

Query: 307 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVK 366
               LRV G+G +   GG  GDLYV L V   P IQR   DL+    I++  A +G  ++
Sbjct: 233 DNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIE 290

Query: 367 VKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKEREL 426
           +K       L++P GTQPG+VL +   G P LN     GD L  + V +P R+++K++EL
Sbjct: 291 IKLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNGHG-SGDLLVRINVEVPKRLTSKQKEL 349

Query: 427 LEEL 430
           + E 
Sbjct: 350 IREF 353

Length = 365

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  210 bits (536), Expect = 1e-63
 Identities = 119/359 (33%), Positives = 197/359 (54%), Gaps = 16/359 (4%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEK-FKEISAAYEVLSDDKKRA 136
           DYY  LG+ K AS  EIK AYRK+A +YHPD NK     E  FKE + AYEVL DD KRA
Sbjct: 4   DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63

Query: 137 MYDQYGEAGVKSTVGGGSSAYTT--NPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 193
            YD++G    +   GGG   ++   + F D+FE F G     F   N+   + R+     
Sbjct: 64  QYDRFGHTAFEG--GGGFEGFSGGFSGFSDIFEDF-GDIFDSFFTGNRGQDKNRKHE--- 117

Query: 194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 253
           KG+DL Y I +   ++  G +    ++    CE C G  ++ G+   IC+ C G G+VM+
Sbjct: 118 KGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQ 177

Query: 254 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 313
                 G F   + CP C G G++IS  C+ C G+G ++ K+ I++K+P G+     +++
Sbjct: 178 GG----GFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKM 233

Query: 314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 373
            G+G   P     GDLY+ + ++     +R+G DL++T+ IS+  A +G  +K++T+   
Sbjct: 234 RGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASK 293

Query: 374 S-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
             ++++P GT+  + +++  +G P L+     G+ +  +K+  P  +++   +LLE L+
Sbjct: 294 KIKIKIPKGTENDEQIIIKNEGMPILHTEKF-GNLILIIKIKTPKNLNSNAIKLLENLS 351

Length = 365

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  187 bits (476), Expect = 3e-54
 Identities = 121/404 (29%), Positives = 196/404 (48%), Gaps = 33/404 (8%)

Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY 138
            Y  L + K  +  EIK AYRKLA ++HPD   +P   EKFKEIS AYEVLSD +KR +Y
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIY 86

Query: 139 DQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDL 198
           D+YGE G++            +  DLF+  FG   GG           R+     +GED+
Sbjct: 87  DEYGEEGLEGGEQPA------DASDLFDLIFG---GG-----------RKPGGKKRGEDI 126

Query: 199 RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTP 258
              + +   +   GA ++  ++    C  C G G    + +  C  C G+G  ++  Q  
Sbjct: 127 VSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD-CKLCNGQGIRVQIRQMG 185

Query: 259 FGLFSQVSVCPSCGGEGEVISE--YCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
             +    S C SC G+G++I E   C+ CSG+G  + +K ++V +  GV     +   GE
Sbjct: 186 SMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGE 245

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISE 375
            D  P    PG++   L+ +     +R+G DLF T  IS  +A+ G V  +  ++G    
Sbjct: 246 ADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLL 304

Query: 376 LQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP--NRISAKERELLEELA 431
           +  PPG   +PGD+ V+  +G P    P  +G+   T +V  P   + + +E+E+L+ L 
Sbjct: 305 VNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLF 364

Query: 432 SLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQND 475
             +N    +     + +  T  + +  +V    +K +  ED++D
Sbjct: 365 P-QNPEEKKDLEDTEIEVVTAQNVDPEEVKDRDQKQQYQEDEDD 407

Length = 421

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  175 bits (446), Expect = 3e-51
 Identities = 124/362 (34%), Positives = 170/362 (46%), Gaps = 80/362 (22%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKK 134
           A  DYYA LGVPK+AS  EIK A++KLAR+YHPDVNK PGA EKFKEI+ AY VLSD +K
Sbjct: 2   AYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEK 61

Query: 135 RAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 194
           R +YD YG           S+ +   P         P  G F G N   F          
Sbjct: 62  RRIYDTYGTTA-------ASAGWQGPPPG------PPGGGDFSGFNVGDFS--------- 99

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
                     +F + +FG    F            G G   GS         GR      
Sbjct: 100 ----------DFFQQLFGGRGGF-----------GGFGDLFGSV--------GRRARKGR 130

Query: 255 D---QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
           D   + P  L          GGE +V+     + S            V++PPGV  G ++
Sbjct: 131 DLEAELPLTLEEAYR-----GGE-KVVEVAGERLS------------VRIPPGVREGQVI 172

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 371
           R+ G+G  G      GDLY+ + +   P  + +G DL++T+ +    A++G  V+V T++
Sbjct: 173 RLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLD 226

Query: 372 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
           G  E+ +PP TQ G  L L  KG P+   P+ RGD    V++TIP R + +E  L ++LA
Sbjct: 227 GPVEVTIPPRTQAGRKLRLKGKGWPR--GPAGRGDQYAEVRITIPTRPTPEEERLYKQLA 284

Query: 432 SL 433
            L
Sbjct: 285 EL 286

Length = 291

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  168 bits (428), Expect = 4e-50
 Identities = 64/130 (49%), Positives = 85/130 (65%), Gaps = 1/130 (0%)

Query: 290 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF 349
           R+R KK + VK+P GV  G  LR+ GEGDAGP GGPPGDLYV + V+  P  +RDG DL+
Sbjct: 30  RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLY 89

Query: 350 STISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLF 409
             + IS  +A++G  ++V T+ G  +L++PPGTQPG VL L  KG P+L     RGD   
Sbjct: 90  CEVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLR-GGGRGDLYV 148

Query: 410 TVKVTIPNRI 419
            VKV  P ++
Sbjct: 149 EVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  174 bits (443), Expect = 6e-50
 Identities = 117/355 (32%), Positives = 185/355 (52%), Gaps = 20/355 (5%)

Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAM 137
           YY  L V K ++ + IK +YRKLA +YHPD N  +  A EKFK I+ AY VLSD+KKRA+
Sbjct: 5   YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 197
           YD+YG+ G+     G S +  ++ F+   +FF  + G        G R  +R   +   D
Sbjct: 65  YDRYGKKGLNQ--AGASQSDFSDFFEDLGSFFEDAFG-------FGARGSKRQKSSIAPD 115

Query: 198 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV-MRTDQ 256
               I L F E++FG +K  ++ +   CE C GTGAK    +  C  C G+GQV MR   
Sbjct: 116 YLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK-DKALETCKQCNGQGQVFMRQ-- 172

Query: 257 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 316
              G  S    C +C G+G++I   C+ C G+  I   + I   +P G+   + + +  +
Sbjct: 173 ---GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNK 229

Query: 317 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS-E 375
           G+   + G  GDLY+   V+E    +R+G DLF    + +    +G  +KV +++G   E
Sbjct: 230 GNEYEK-GKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELE 288

Query: 376 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 430
           L++P   +         +G  K  + S RG  +  ++V  P  ++ +++ELLE+L
Sbjct: 289 LKIPRNARDRQTFAFRNEGV-KHPESSYRGSLIVELQVIYPKSLNKEQQELLEKL 342

Length = 369

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  146 bits (369), Expect = 6e-40
 Identities = 101/360 (28%), Positives = 157/360 (43%), Gaps = 79/360 (21%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYYA +GV  +   K IK AYR+LAR+YHPDV+KEP A  +FKE++ A+EVLSD+++RA 
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 64

Query: 138 YDQYGEAGVKSTVG-----GGSSAYTTNPF-DLFETFFGPSMGGFPGMNQTGFRTRRRST 191
           YDQ  +             G   ++    F D+F + FG          Q   ++R+R  
Sbjct: 65  YDQLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFG----------QHARQSRQRPA 114

Query: 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 251
             +G D+  ++ +   E++   E +  +S+     V    G                   
Sbjct: 115 -ARGHDIEIEVAVFLEETL--TEHKRTISY--NLPVYNAFG------------------- 150

Query: 252 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
           M   + P  L  ++   P+  G G+             RIRLK                 
Sbjct: 151 MIEQEIPKTLNVKI---PAGVGNGQ-------------RIRLK----------------- 177

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 371
              G+G  G  GGP GDL++ + +   P     G DL   + ++  +A +G  V V T++
Sbjct: 178 ---GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLK 234

Query: 372 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 431
               L +PPG+Q G  L +  KG   L      GD    +K+ +P +   K   L ++LA
Sbjct: 235 ESILLTIPPGSQAGQRLRVKGKG---LVSKKQTGDLYAVLKIVMPPKPDEKTAALWQQLA 291

Length = 306

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  117 bits (296), Expect = 2e-32
 Identities = 42/63 (66%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGA-TEKFKEISAAYEVLSDDKKRA 136
           DYY  LGVP+ AS +EIK AYRKLA +YHPD N    A  EKFKEI+ AYEVLSD +KRA
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 137 MYD 139
           +YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score =  101 bits (254), Expect = 2e-26
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 225 CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK 284
           C  C G+GAK G+K + C TCGG GQV +   T FG F   + CP+CGG G++I + C K
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 285 CSGEG 289
           C G+G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score =  100 bits (250), Expect = 5e-26
 Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 2/59 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK--EPGATEKFKEISAAYEVLSDDKK 134
           DYY  LGVP+ AS  EIK AYRKLA +YHPD N   +  A EKFKEI+ AYEVLSD +K
Sbjct: 2   DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 99.2 bits (248), Expect = 9e-26
 Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSD 131
           DYY  LGVP  AS +EIK AYRKLA +YHPD N  +P A EKFKEI+ AYEVLSD
Sbjct: 1   DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 98.7 bits (245), Expect = 2e-23
 Identities = 66/274 (24%), Positives = 89/274 (32%), Gaps = 54/274 (19%)

Query: 74  CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG--ATEKFKEISAAYEVLSD 131
               DYY  LGVP +AS +EIK AYRKLA +YHPD N      A EKFKEI+ AYE+LSD
Sbjct: 3   SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSD 62

Query: 132 DKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRST 191
            ++RA YD+ G            SA    P +      G                R +  
Sbjct: 63  PERRAEYDKIGADNYFPGKSYRESAAF--PIEGSLQLTGLYE-----------EWRGKRN 109

Query: 192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 251
            T+ +    D++      +  A   F                + GS  R           
Sbjct: 110 KTERKASLADLLSRGLSGLAAALSLFA----------DEAALRSGSLRRRDLA------- 152

Query: 252 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
                  F                                 L K +K  +  G   G  L
Sbjct: 153 -ANLADNFEEALAGVK-------------------KAVARLLGKALKSTIKAGALEGKAL 192

Query: 312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDG 345
           R+ G   +    G  G   +    +  P    +G
Sbjct: 193 RLKGLLKSAR--GALGKARLKELSKRHPPFALEG 224

Length = 237

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 1/81 (1%)

Query: 347 DLFSTISISYLDAIMGTVVKVKTVEGIS-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRG 405
           DL+ T+ IS  +A++G  V+V T++G   ++++P GTQPGD L +  KG P     + RG
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 406 DHLFTVKVTIPNRISAKEREL 426
           D + T+ V IP ++S++++EL
Sbjct: 61  DLIVTLNVKIPKKLSSEQKEL 81

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 84.7 bits (210), Expect = 2e-20
 Identities = 30/65 (46%), Positives = 40/65 (61%)

Query: 225 CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK 284
           C  C GTGAK G K + C  C G GQV++  +TP G+F     CP CGG G++I + C+ 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 285 CSGEG 289
           C G+G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 93.7 bits (232), Expect = 4e-20
 Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY  LG+ + A  +EIK A+RKLA++YHPD NK P A   F EI+ A +VLS+ KKRA 
Sbjct: 3   DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRAN 62

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFF 169
           YD+YG  GV          +     D+F +FF
Sbjct: 63  YDKYGHDGVD-----REDDFDFQA-DVFNSFF 88

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 62.8 bits (154), Expect = 9e-12
 Identities = 50/173 (28%), Positives = 68/173 (39%), Gaps = 47/173 (27%)

Query: 196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGT-------GAKMGSKMRICSTCGGR 248
            DLRYD+ L   E+ FG EKE ++    T      T       G   G ++R+     G 
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVTRVREKKTLTVKIPAGVDDGQRLRL----RGE 56

Query: 249 GQVMRTDQTPFGLFSQVSVCPS----------------------CGGEGEVISEYCRKCS 286
           G        P  L+  + V P                        GGE EV +       
Sbjct: 57  GDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT------- 109

Query: 287 GEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP 339
                 L   +K+K+PPG   G++LR+ G+G    RGG  GDLYV + V E P
Sbjct: 110 ------LGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKV-EFP 155

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 14/70 (20%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPD--VNKEPG--------ATEKFKEISAAYE 127
           D Y  LGV +S   +EIK AYRKL  ++HPD  V K  G        A EK +EI AAYE
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAK--GLPPEMMEMAKEKAQEIQAAYE 258

Query: 128 VLSDDKKRAM 137
           ++   K++  
Sbjct: 259 LIK--KQKGF 266

Length = 267

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 62.3 bits (151), Expect = 3e-10
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 10/84 (11%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGAT--------EKFKEISAAYEVL 129
           D Y  LG+ +  S ++IK  YR L+ ++HPD  K P           EK+K I+ AY +L
Sbjct: 99  DPYEILGIDQDTSERDIKKRYRMLSMKFHPD--KAPPMVNELRSEYEEKYKTITKAYGLL 156

Query: 130 SDDKKRAMYDQYGEAGVKSTVGGG 153
           +D K+R  Y  YG          G
Sbjct: 157 TDKKRRENYLNYGTPDSPQHTSEG 180

Length = 610

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 62.1 bits (150), Expect = 4e-10
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY 138
           +Y  LGV  +A  KEI   Y KLA  Y+P          KFK+I+ AY++L D  K+ MY
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMY 634

Query: 139 DQYGEAGVK 147
           +++G  G+K
Sbjct: 635 NKFGYDGIK 643

Length = 1136

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 48.5 bits (115), Expect = 5e-06
 Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 78  DYYATLGVPK---SASGKEIKAAYRKLARQYHPDVNKEPGAT---EKFKEISAAYEVLSD 131
           D YA LG+ K    A   +I  A++K   +YHPD     G     E FK I  A EVL D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 132 DKKRAMYD 139
            K R  YD
Sbjct: 104 RKLRLQYD 111

Length = 379

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 43.7 bits (104), Expect = 8e-06
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 295 KNIKVKVPPGVSTGSILRVVGEG-DAGPRGGPPGDLYVYLDVEEIP 339
           + +K+K+P G   G  LR+ G+G      G   GDL V L+V +IP
Sbjct: 27  RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNV-KIP 71

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 78  DYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVL 129
           D +   G+P++       +K  YR+L R YHPD   +        A ++  E++ AY+ L
Sbjct: 2   DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTL 61

Query: 130 SDDKKRAMY 138
            D   RA Y
Sbjct: 62  KDPLLRAEY 70

Length = 174

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 42.6 bits (100), Expect = 9e-05
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 92  KEIKAAYRKLARQYHPDVNK----EPGATEKFKEISAAYEVLSDDKKRAMY 138
             ++  YR+L  QYHPD +     +  A+++   ++ AY  L D  +RA Y
Sbjct: 6   SRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 83  LGVPKSASGKE--IKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQ 140
           LG+P+SA G    ++ AY +   ++HPD   + G  EK KE++  Y+   +  K      
Sbjct: 11  LGLPRSAWGNLPLMRKAYLRKCLEFHPD---KGGDEEKMKELNTLYKKFRESVKSLRDLD 67

Query: 141 YGE 143
             E
Sbjct: 68  GEE 70

Length = 153

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 9/75 (12%)

Query: 347 DLFSTISISYLDAIMGTVVKVK------TVEGISELQV--PPGTQPGDVLVLAKKGAPKL 398
           DL   + ++  +A  G   ++K       V     L V  P G   G  L L  +G    
Sbjct: 2   DLRYDLELTLEEAYFGKEKEIKIPRKVTRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGP 61

Query: 399 NKPSIRGDHLFTVKV 413
           N     GD    ++V
Sbjct: 62  NG-GPPGDLYVVIRV 75

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPD-----------VNKEPGATEKFKEISAAY 126
           D    LGV   A    IK AYRKL  + HPD           + K     EK +EI  AY
Sbjct: 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEK---LKEKLQEIQEAY 170

Query: 127 E 127
           E
Sbjct: 171 E 171

Length = 174

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 83  LGVPKSASGKE--IKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           LG+P +A G    ++ AY +  ++YHPD   + G  EK K +++ Y+ L +  K A 
Sbjct: 17  LGLPMAAWGNLPLMRKAYLRKCKEYHPD---KGGDEEKMKRLNSLYKKLQEGVKSAR 70

Length = 647

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	499
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.89
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.86
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.78
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.78
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.75
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.7
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.7
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.69
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.65
PHA03102	153	Small T antigen; Reviewed	99.64
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.63
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.6
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.6
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.58
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.57
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.55
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.5
PRK10767	371	chaperone protein DnaJ; Provisional	99.46
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.45
PRK14282	369	chaperone protein DnaJ; Provisional	99.43
PRK01356	166	hscB co-chaperone HscB; Provisional	99.41
PRK14290	365	chaperone protein DnaJ; Provisional	99.4
PRK05014	171	hscB co-chaperone HscB; Provisional	99.4
PRK14294	366	chaperone protein DnaJ; Provisional	99.37
PRK14298	377	chaperone protein DnaJ; Provisional	99.36
PRK14295	389	chaperone protein DnaJ; Provisional	99.34
PRK14285	365	chaperone protein DnaJ; Provisional	99.34
PRK00294	173	hscB co-chaperone HscB; Provisional	99.33
PRK03578	176	hscB co-chaperone HscB; Provisional	99.32
PRK14284	391	chaperone protein DnaJ; Provisional	99.31
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.31
PRK14300	372	chaperone protein DnaJ; Provisional	99.31
PRK14287	371	chaperone protein DnaJ; Provisional	99.31
PRK14301	373	chaperone protein DnaJ; Provisional	99.31
PRK14278	378	chaperone protein DnaJ; Provisional	99.3
PTZ00100	116	DnaJ chaperone protein; Provisional	99.28
PRK14286	372	chaperone protein DnaJ; Provisional	99.27
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.26
PRK14288	369	chaperone protein DnaJ; Provisional	99.26
PRK14281	397	chaperone protein DnaJ; Provisional	99.25
PRK14276	380	chaperone protein DnaJ; Provisional	99.25
PRK14279	392	chaperone protein DnaJ; Provisional	99.25
PRK14280	376	chaperone protein DnaJ; Provisional	99.24
PRK14293	374	chaperone protein DnaJ; Provisional	99.23
PRK14289	386	chaperone protein DnaJ; Provisional	99.23
PRK14297	380	chaperone protein DnaJ; Provisional	99.22
PRK14277	386	chaperone protein DnaJ; Provisional	99.21
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.2
PHA02624	647	large T antigen; Provisional	99.19
PRK14296	372	chaperone protein DnaJ; Provisional	99.19
PRK14283	378	chaperone protein DnaJ; Provisional	99.18
PRK14292	371	chaperone protein DnaJ; Provisional	99.17
PRK14291	382	chaperone protein DnaJ; Provisional	99.14
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.12
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.06
PRK01773	173	hscB co-chaperone HscB; Provisional	98.95
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.88
PRK14299	291	chaperone protein DnaJ; Provisional	98.86
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.76
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.75
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.7
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.66
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.61
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.35
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.24
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.23
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.16
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.73
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.66
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.5
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.49
KOG2813	406	consensus Predicted molecular chaperone, contains	97.09
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	96.79
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.46
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.36
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.92
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	95.85
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.38
KOG2813	406	consensus Predicted molecular chaperone, contains	93.9
KOG0431	453	consensus Auxilin-like protein and related protein	93.34
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	92.73
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	90.03
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	81.38
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	81.13
PRK14714	1337	DNA polymerase II large subunit; Provisional	80.02

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5e-103  Score=796.67  Aligned_cols=348  Identities=47%  Similarity=0.858  Sum_probs=322.3

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc-C
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV-G  151 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~-~  151 (499)
                      ++.+|||+||||+++||.+||||||||||++||||+|+ +++|+++|++|+|||||||||+||++||+||++++++++ +
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            36789999999999999999999999999999999999 789999999999999999999999999999999997332 2


Q ss_pred             C-CCCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccC
Q 010831          152 G-GSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTG  230 (499)
Q Consensus       152 g-~~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~G  230 (499)
                      + ++++|+.++.|||++|||+   +.+       ++++++++++|.|+++.|+|||+|||+|++++|.+++.+.|++|+|
T Consensus        81 g~g~~~fgg~~~DIF~~~FgG---g~~-------~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~G  150 (371)
T COG0484          81 GFGFGGFGGDFGDIFEDFFGG---GGG-------GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHG  150 (371)
T ss_pred             CCCcCCCCCCHHHHHHHhhcC---CCc-------ccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCC
Confidence            2 2233433678999999972   111       1233445789999999999999999999999999999999999999


Q ss_pred             cccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCE
Q 010831          231 TGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       231 sG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  310 (499)
                      +|+++++.+.+|++|+|+|++.+.+++  |.|+++++|+.|+|+|++|+++|.+|+|.|++++.++|+|+||||+.+|++
T Consensus       151 sGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~  228 (371)
T COG0484         151 SGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDR  228 (371)
T ss_pred             CCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCE
Confidence            999999999999999999999888887  899999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEe
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVL  390 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l  390 (499)
                      ||+.|+|+++++|+++|||||+|.|++|+.|+|+|+|||++++|++++|+||++++|+||||.++|+||+|||+|++++|
T Consensus       229 ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~~rl  308 (371)
T COG0484         229 IRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEVFRL  308 (371)
T ss_pred             EEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          391 AKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       391 ~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|+|||+.++. .+|||||+|+|++|++|+.+|++||++|++..
T Consensus       309 ~gkG~p~~~~~-~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~  351 (371)
T COG0484         309 RGKGMPKLRSG-GRGDLYVRVKVETPKNLSDEQKELLEEFAKSL  351 (371)
T ss_pred             cCCCccccCCC-CcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence            99999997754 67999999999999999999999999999966

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.4e-86  Score=687.86  Aligned_cols=346  Identities=35%  Similarity=0.664  Sum_probs=306.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc--CCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV--GGG  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~--~g~  153 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+|||||+||++||+||+++++.+.  +++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~   82 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence            479999999999999999999999999999999998888999999999999999999999999999998775321  111


Q ss_pred             CCCCc-----------cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeeccee
Q 010831          154 SSAYT-----------TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHL  222 (499)
Q Consensus       154 ~~~~~-----------~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~  222 (499)
                      ++++.           .++.|+|++|||+   + ++         +..+..+++|+.+.|.|+|+|+|+|++++|.+++.
T Consensus        83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fgg---g-~~---------~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~  149 (372)
T PRK14296         83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGS---N-KS---------DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLL  149 (372)
T ss_pred             CCccccccccccccccccchhhhhhhcCC---C-cc---------CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeee
Confidence            11110           0122455555542   1 00         11123578999999999999999999999999999


Q ss_pred             eecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeC
Q 010831          223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVP  302 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP  302 (499)
                      +.|+.|+|+|.+.+..+.+|+.|+|+|.++..++.++.++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||
T Consensus       150 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip  229 (372)
T PRK14296        150 TNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIP  229 (372)
T ss_pred             eccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEEC
Confidence            99999999999999999999999999999888877665566678999999999999999999999999999999999999


Q ss_pred             CCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccC-CcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCC
Q 010831          303 PGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRD-GIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG  381 (499)
Q Consensus       303 ~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~-G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~g  381 (499)
                      +|+++|++|+|+|+|++++.++.+|||||+|+|++|+.|+|+ |+|||++++|+|.|||||+++.|+||||+++|+||++
T Consensus       230 ~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~  309 (372)
T PRK14296        230 KGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKS  309 (372)
T ss_pred             CCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCc
Confidence            999999999999999998778889999999999999999995 8999999999999999999999999999989999999


Q ss_pred             CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       382 tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|||++++|+|+|||...+++.+|||||+|+|+||+.||++|+++|++|++..
T Consensus       310 t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~  362 (372)
T PRK14296        310 INSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT  362 (372)
T ss_pred             cCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99999999999999965445568999999999999999999999999999864

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.3e-84  Score=674.65  Aligned_cols=347  Identities=43%  Similarity=0.757  Sum_probs=310.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc-CCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV-GGGS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~-~g~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|++++++++|++|++||+||+||.+|++||+||++...++. ++++
T Consensus         2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~   81 (378)
T PRK14278          2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF   81 (378)
T ss_pred             CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence            479999999999999999999999999999999998878899999999999999999999999999986432211 1111


Q ss_pred             C-CCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccc
Q 010831          155 S-AYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGA  233 (499)
Q Consensus       155 ~-~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~  233 (499)
                      + +| .++.|+|++|||++  + ++       .....+..++.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|.
T Consensus        82 ~~~f-~~~~d~f~~ffgg~--g-~~-------~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~  150 (378)
T PRK14278         82 GGGF-GGLGDVFEAFFGGG--A-AS-------RGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGT  150 (378)
T ss_pred             CcCc-CchhHHHHHHhCCC--C-CC-------CCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccC
Confidence            1 12 23457888888731  1 00       011112357899999999999999999999999999999999999999


Q ss_pred             ccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEE
Q 010831          234 KMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       234 ~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                      +.+..+.+|+.|+|+|+++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||||+++|++|+|
T Consensus       151 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  230 (378)
T PRK14278        151 AGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRL  230 (378)
T ss_pred             CCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEE
Confidence            99999999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEecc-CCeEeEEeCCCCCCCcEEEecc
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV-EGISELQVPPGTQPGDVLVLAK  392 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tl-dG~~~l~ip~gtq~g~~~~l~G  392 (499)
                      +|+|++++.++++|||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|| ++.+.|+||+++++|++++|+|
T Consensus       231 ~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g  310 (378)
T PRK14278        231 AAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRG  310 (378)
T ss_pred             ccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECC
Confidence            999999888888999999999999999999999999999999999999999999999 5567999999999999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          393 KGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       393 ~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|||..+. ..+|||||+|+|+||+.||++|+++|++|+.+.
T Consensus       311 ~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~  351 (378)
T PRK14278        311 RGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR  351 (378)
T ss_pred             CCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence            99997653 368999999999999999999999999999754

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.9e-84  Score=674.35  Aligned_cols=346  Identities=45%  Similarity=0.808  Sum_probs=312.6

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC--
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG--  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~--  153 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||+++++.+++++  
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~~   83 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI   83 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcccc
Confidence            469999999999999999999999999999999998888999999999999999999999999999998876432110  


Q ss_pred             --CCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCc
Q 010831          154 --SSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGT  231 (499)
Q Consensus       154 --~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~Gs  231 (499)
                        .+++ .++.|+|++|||++  +  +     .  . ..+..++.|+.+.|.|+|+|+|+|++++|.+++.+.|+.|+|+
T Consensus        84 ~~~~~~-~~~~d~f~~~Fgg~--~--~-----~--~-~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~  150 (377)
T PRK14298         84 FRGADF-GGFGDIFEMFFGGG--G--R-----R--G-RMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGT  150 (377)
T ss_pred             cccCCc-CcchhhhHhhhcCC--C--c-----c--C-CCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCC
Confidence              0111 23447888888631  1  0     0  0 1123578999999999999999999999999999999999999


Q ss_pred             ccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEE
Q 010831          232 GAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL  311 (499)
Q Consensus       232 G~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~I  311 (499)
                      |.+.+..+.+|+.|+|+|+++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||||+++|++|
T Consensus       151 G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i  230 (377)
T PRK14298        151 GAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRL  230 (377)
T ss_pred             cccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEE
Confidence            99999999999999999999998888889998889999999999999999999999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEec
Q 010831          312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLA  391 (499)
Q Consensus       312 rl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~  391 (499)
                      +|+|+|++++.++++|||||+|+|++|+.|+|+|+|||+++.|+|.|||+|+++.|+||||++.|+||+|+++|++++|+
T Consensus       231 ~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~  310 (377)
T PRK14298        231 KLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLK  310 (377)
T ss_pred             EEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEEC
Confidence            99999999877889999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             cCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 010831          392 KKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  435 (499)
Q Consensus       392 G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~  435 (499)
                      |+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|+++.+
T Consensus       311 g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~~  353 (377)
T PRK14298        311 DKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELSN  353 (377)
T ss_pred             CCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            999997654 3689999999999999999999999999998543

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.3e-84  Score=674.71  Aligned_cols=346  Identities=44%  Similarity=0.810  Sum_probs=312.4

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC---
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG---  152 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g---  152 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||+++++++.++   
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG   82 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence            46999999999999999999999999999999999988899999999999999999999999999999887643211   


Q ss_pred             CCCCCc-----cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccc
Q 010831          153 GSSAYT-----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEV  227 (499)
Q Consensus       153 ~~~~~~-----~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~  227 (499)
                      +.++|.     .++.|+|++|||++  +  +.       +...+..++.|+.+.|.|||+|+|+|++++|.+++.+.|+.
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~--~--~~-------~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~  151 (380)
T PRK14276         83 GFGGFDGSGGFGGFEDIFSSFFGGG--G--AR-------RNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHT  151 (380)
T ss_pred             CCCCccccccccchhhHHHHHhCcc--c--cc-------cCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCC
Confidence            111121     23457788888631  1  00       00112357899999999999999999999999999999999


Q ss_pred             ccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCC
Q 010831          228 CTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST  307 (499)
Q Consensus       228 C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~  307 (499)
                      |+|+|...+..+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++
T Consensus       152 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  231 (380)
T PRK14276        152 CNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVET  231 (380)
T ss_pred             CcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccC
Confidence            99999999988999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcE
Q 010831          308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDV  387 (499)
Q Consensus       308 G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~  387 (499)
                      |++|+|+|+|++.+.++++|||||+|+|++|+.|+|+|+|||++++|+|.||++|++++|+|+||+++|+||+|+++|++
T Consensus       232 G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~  311 (380)
T PRK14276        232 GQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKK  311 (380)
T ss_pred             CcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCE
Confidence            99999999999987777889999999999999999999999999999999999999999999999989999999999999


Q ss_pred             EEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          388 LVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       388 ~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      ++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++|++.
T Consensus       312 ~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~  356 (380)
T PRK14276        312 FRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKA  356 (380)
T ss_pred             EEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999999998654 35799999999999999999999999999874

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.7e-84  Score=673.14  Aligned_cols=344  Identities=32%  Similarity=0.598  Sum_probs=299.9

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG  153 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~  153 (499)
                      |..|||+||||+++||.+|||+|||+||++||||+|+ ++.++++|++|++|||||+||+||++||+||+++++.+.+ +
T Consensus         1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~-~   79 (369)
T PRK14288          1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGA-S   79 (369)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCC-C
Confidence            3579999999999999999999999999999999998 4678999999999999999999999999999987763211 1


Q ss_pred             CCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccc
Q 010831          154 SSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGA  233 (499)
Q Consensus       154 ~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~  233 (499)
                      .++| .++|+.|++||+..||+. +.      ...+.+..+++|+.+.|.|+|+|+|+|++++|.+++.+.|+.|+|+|.
T Consensus        80 ~~~~-~~~f~~~~~~F~~~fg~g-~~------~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~  151 (369)
T PRK14288         80 QSDF-SDFFEDLGSFFEDAFGFG-AR------GSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGA  151 (369)
T ss_pred             cccc-ccchhhHHHHHHhhcCCC-Cc------ccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCccc
Confidence            1122 133444445554333211 10      011122357899999999999999999999999999999999999999


Q ss_pred             ccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEE
Q 010831          234 KMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       234 ~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                      ..+ .+.+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++|+|
T Consensus       152 ~~~-~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l  226 (369)
T PRK14288        152 KDK-ALETCKQCNGQGQVFMRQ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVL  226 (369)
T ss_pred             CCC-CCcCCCCCCCCcEEEEEe----ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEE
Confidence            876 678999999999876543    677888899999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEecc
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAK  392 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G  392 (499)
                      +|+|++.+ ++.+|||||+|+|++|+.|+|+|+|||++++|+|.|||||+++.|+||||+ ++|+||+++|||++++|+|
T Consensus       227 ~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g  305 (369)
T PRK14288        227 KNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRN  305 (369)
T ss_pred             ccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcC
Confidence            99999966 578999999999999999999999999999999999999999999999997 7999999999999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          393 KGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       393 ~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|||..+. ..+|||||+|+|++|+.|+++|+++|++|++.+
T Consensus       306 ~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  346 (369)
T PRK14288        306 EGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHASF  346 (369)
T ss_pred             CCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99997653 358999999999999999999999999999753

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-84  Score=671.03  Aligned_cols=346  Identities=43%  Similarity=0.840  Sum_probs=312.7

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-CC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|++++++++|++|++||+||+||++|++||+||++++..+.++ +.
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA   82 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence            46999999999999999999999999999999999877889999999999999999999999999999887643211 11


Q ss_pred             CCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCcccc
Q 010831          155 SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAK  234 (499)
Q Consensus       155 ~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~  234 (499)
                      ++|. ++.|+|+.|||++  +  +.      +. ..+..+|+|+.+.|.|+|+|+|+|++++|.+++.+.|+.|+|+|..
T Consensus        83 ~~f~-~~~d~f~~~fgg~--~--~~------~~-~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~  150 (371)
T PRK14287         83 GDFG-GFSDIFDMFFGGG--G--GR------RN-PNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAK  150 (371)
T ss_pred             cccc-chHHHHHhhhccc--c--CC------CC-CCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccC
Confidence            2221 3457888888731  1  00      00 1123478999999999999999999999999999999999999999


Q ss_pred             cCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEc
Q 010831          235 MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV  314 (499)
Q Consensus       235 ~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~  314 (499)
                      .+..+.+|+.|+|+|+++..+++++|++++.++|+.|+|+|+++.++|..|.|.|.+.+.++++|.||+|+++|++|+|+
T Consensus       151 ~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~  230 (371)
T PRK14287        151 PGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVS  230 (371)
T ss_pred             CCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEc
Confidence            98889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCC
Q 010831          315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKG  394 (499)
Q Consensus       315 G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~G  394 (499)
                      |+|++++.++.+|||||+|+|++|+.|+|+|+|||+++.|+|.+|++|++++|+|+||++.|+||+|+++|++++|+|+|
T Consensus       231 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~G  310 (371)
T PRK14287        231 GQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKG  310 (371)
T ss_pred             cCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCCC
Confidence            99999877778999999999999999999999999999999999999999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          395 APKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       395 mP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      ||..++. .+|||||+|+|.+|+.|+.+|+++|++|+++.
T Consensus       311 ~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  349 (371)
T PRK14287        311 VPNVHGR-GQGDQHVQVRVVTPKNLTEKEKELMREFAGMS  349 (371)
T ss_pred             ccCCCCC-CCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence            9976543 58999999999999999999999999999753

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.4e-84  Score=674.90  Aligned_cols=351  Identities=42%  Similarity=0.819  Sum_probs=312.2

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc-CC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV-GG  152 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~-~g  152 (499)
                      +..|||+||||+++|+.+|||+|||+||++||||+|++ +.++++|++|++||+||+||.+|+.||+||+++++.+. ++
T Consensus         3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14277          3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ   82 (386)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence            35799999999999999999999999999999999984 67889999999999999999999999999998775321 10


Q ss_pred             ---CCCC-----Cc---cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecce
Q 010831          153 ---GSSA-----YT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSH  221 (499)
Q Consensus       153 ---~~~~-----~~---~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~  221 (499)
                         +.++     +.   .++.|+|++||+..+|+.+        ..+..+..++.|+++.|.|+|+|+|+|+++++.+++
T Consensus        83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~--------~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r  154 (386)
T PRK14277         83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGR--------RRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVER  154 (386)
T ss_pred             CCcCCCCccccCccccccchhHHHHHhhcccccCCC--------cCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEe
Confidence               0011     11   1233678888874332210        001112357899999999999999999999999999


Q ss_pred             eeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEe
Q 010831          222 LETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKV  301 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~I  301 (499)
                      .+.|+.|+|+|...+..+.+|+.|+|+|+++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.|
T Consensus       155 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~I  234 (386)
T PRK14277        155 FEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNI  234 (386)
T ss_pred             eccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEec
Confidence            99999999999999988999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCC
Q 010831          302 PPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG  381 (499)
Q Consensus       302 P~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~g  381 (499)
                      |+|+++|++|+|+|+|++.+.++.+|||||+|+|++|+.|+|+|+|||++++|+|.|||+|+++.|+||||++.|+||++
T Consensus       235 p~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g  314 (386)
T PRK14277        235 PAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEG  314 (386)
T ss_pred             CCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCC
Confidence            99999999999999999977777899999999999999999999999999999999999999999999999989999999


Q ss_pred             CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       382 tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +++|++++|+|+|||..+.+ .+|||||+|+|+||+.|+++|+++|++|+++.
T Consensus       315 ~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~  366 (386)
T PRK14277        315 TQTGTKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFEKLS  366 (386)
T ss_pred             CCCCCEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            99999999999999976543 68999999999999999999999999999754

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-83  Score=670.09  Aligned_cols=347  Identities=46%  Similarity=0.856  Sum_probs=312.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-CC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||+++++.+.++ ++
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~   82 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF   82 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence            36999999999999999999999999999999999888899999999999999999999999999999887643211 10


Q ss_pred             C--CCc--cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccC
Q 010831          155 S--AYT--TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTG  230 (499)
Q Consensus       155 ~--~~~--~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~G  230 (499)
                      +  +|.  +++.|+|+.|||++  +  .       +....+..+++|+.+.|.|||+|+|+|++++|.+++.+.|+.|+|
T Consensus        83 ~~~~~~~~~~~~d~f~~~fgg~--~--~-------~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G  151 (376)
T PRK14280         83 GGGDFGGGFGFEDIFSSFFGGG--G--R-------RRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHG  151 (376)
T ss_pred             CCCCccccccchhhHHHHhCCc--c--c-------cCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCC
Confidence            1  121  14457888888631  1  0       000112357899999999999999999999999999999999999


Q ss_pred             cccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCE
Q 010831          231 TGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       231 sG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  310 (499)
                      +|...+..+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++
T Consensus       152 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~  231 (376)
T PRK14280        152 SGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQ  231 (376)
T ss_pred             cccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcE
Confidence            99999988999999999999998889999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEe
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVL  390 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l  390 (499)
                      |+|+|+|++.+.++.+|||||+|+|++|+.|+|+|+|||+++.|+|.|||+|+++.|+||||++.|+||+++++|++++|
T Consensus       232 i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~i  311 (376)
T PRK14280        232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRL  311 (376)
T ss_pred             EEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEEE
Confidence            99999999988778899999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          391 AKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       391 ~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|+|||..+. ..+|||||+|+|.+|+.||++|+++|++|+++.
T Consensus       312 ~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~  354 (376)
T PRK14280        312 KGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS  354 (376)
T ss_pred             cCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999997654 368999999999999999999999999998753

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-83  Score=669.65  Aligned_cols=349  Identities=44%  Similarity=0.831  Sum_probs=312.6

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC---
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG---  151 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~---  151 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+. +.++++|++|++||+||+||.+|++||+||+++++.+.+   
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            4699999999999999999999999999999999974 578899999999999999999999999999988763211   


Q ss_pred             CCCCCCc----cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccc
Q 010831          152 GGSSAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEV  227 (499)
Q Consensus       152 g~~~~~~----~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~  227 (499)
                      +++++|.    .++.|+|++|||+++++   .     ++ +..+..+++|+++.|.|||+|+|+|++++|.+++.+.|+.
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~---~-----~~-~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~  153 (380)
T PRK14297         83 GGFGGFDFSDMGGFGDIFDSFFGGGFGS---S-----SR-RRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCET  153 (380)
T ss_pred             CCCCCcCcccccchhHHHHHHhccCccc---c-----cc-ccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCC
Confidence            1112221    13457888888742111   0     00 1112357899999999999999999999999999999999


Q ss_pred             ccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCC
Q 010831          228 CTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST  307 (499)
Q Consensus       228 C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~  307 (499)
                      |+|+|..++..+.+|+.|+|+|+++..+++++|++++.++|+.|+|+|.++.++|..|+|.|++.+.++++|.||+|+++
T Consensus       154 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~  233 (380)
T PRK14297        154 CNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDT  233 (380)
T ss_pred             cccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCC
Confidence            99999999988999999999999998899999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcE
Q 010831          308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDV  387 (499)
Q Consensus       308 G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~  387 (499)
                      |++|+|.|+|++++.++.+|||||+|+|++|+.|+|+|+||++++.|+|.+||+|+++.|+|+||+++|+||+|+++|++
T Consensus       234 G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~  313 (380)
T PRK14297        234 GNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTV  313 (380)
T ss_pred             CcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCE
Confidence            99999999999987778899999999999999999999999999999999999999999999999989999999999999


Q ss_pred             EEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          388 LVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       388 ~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      ++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++|+.+.
T Consensus       314 ~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  359 (380)
T PRK14297        314 FRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS  359 (380)
T ss_pred             EEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence            9999999997653 468999999999999999999999999999754

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.9e-83  Score=664.82  Aligned_cols=348  Identities=45%  Similarity=0.832  Sum_probs=307.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-C
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-G  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-~  153 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ +++++++|++|++||+||+||++|++||+||+++++.+.++ +
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence            469999999999999999999999999999999997 46789999999999999999999999999999887642111 1


Q ss_pred             CCC---Cc---cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccc
Q 010831          154 SSA---YT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEV  227 (499)
Q Consensus       154 ~~~---~~---~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~  227 (499)
                      .++   |.   .++.|+|++|||++.++.  .   .  ..+..+..++.|+++.|.|+|+|+|+|++++|.+++.+.|++
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~--~---~--~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~  155 (372)
T PRK14286         83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGG--S---G--GGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVD  155 (372)
T ss_pred             CCCcccccccccchhhHHHHhhCCCccCC--C---c--ccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCC
Confidence            111   11   234478888887421110  0   0  011122357899999999999999999999999999999999


Q ss_pred             ccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCC
Q 010831          228 CTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST  307 (499)
Q Consensus       228 C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~  307 (499)
                      |+|+|...+..+.+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|+||+|+++
T Consensus       156 C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  231 (372)
T PRK14286        156 CNGSGASKGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVET  231 (372)
T ss_pred             CcCCCcCCCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCC
Confidence            9999999998889999999999886643    788888999999999999999999999999999999999999999999


Q ss_pred             CCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCc
Q 010831          308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGD  386 (499)
Q Consensus       308 G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~  386 (499)
                      |++|+|+|+|++.++++.+|||||+|+|++|+.|+|+|+||++++.|+|.+||+|+++.|+||||+ ++|+||+++++|+
T Consensus       232 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~  311 (372)
T PRK14286        232 GSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQ  311 (372)
T ss_pred             CCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCc
Confidence            999999999999887778899999999999999999999999999999999999999999999997 7999999999999


Q ss_pred             EEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 010831          387 VLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  435 (499)
Q Consensus       387 ~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~  435 (499)
                      +++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++..+
T Consensus       312 ~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~~  359 (372)
T PRK14286        312 VFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARESG  359 (372)
T ss_pred             EEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            99999999998654 3689999999999999999999999999998653

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-82  Score=664.75  Aligned_cols=356  Identities=42%  Similarity=0.756  Sum_probs=308.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC-CC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG-GG  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~-g~  153 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|++ +.++++|++|++||+||+||.+|++||+||+++++.+.. ++
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~   81 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG   81 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence            5799999999999999999999999999999999974 568899999999999999999999999999988763211 01


Q ss_pred             CCCC---ccCCCCc---cccccCCCCCC-------CCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecc
Q 010831          154 SSAY---TTNPFDL---FETFFGPSMGG-------FPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELS  220 (499)
Q Consensus       154 ~~~~---~~~~~di---F~~fFg~~~gg-------~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~  220 (499)
                      .++|   ..++.|+   |++|||++.+.       |.++.+++..+.++....++.|+++.|.|+|+|+|+|++++|.++
T Consensus        82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~  161 (397)
T PRK14281         82 GPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK  161 (397)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEE
Confidence            1111   1122344   45788742110       000000000000111224789999999999999999999999999


Q ss_pred             eeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEE
Q 010831          221 HLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVK  300 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~  300 (499)
                      +.+.|+.|+|+|...+ .+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|+
T Consensus       162 r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~  240 (397)
T PRK14281        162 KQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVT  240 (397)
T ss_pred             eeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEe
Confidence            9999999999999887 678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCC
Q 010831          301 VPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPP  380 (499)
Q Consensus       301 IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~  380 (499)
                      ||+|+++|++|+|+|+|++++.++.+|||||+|++++|+.|+|+|+|||+++.|+|.|||+|++++|+||||++.|+||+
T Consensus       241 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~  320 (397)
T PRK14281        241 VPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPA  320 (397)
T ss_pred             cCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCC
Confidence            99999999999999999998877889999999999999999999999999999999999999999999999998999999


Q ss_pred             CCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          381 GTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       381 gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      |+++|++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.
T Consensus       321 g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~  372 (397)
T PRK14281        321 GTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS  372 (397)
T ss_pred             ccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence            99999999999999997654 36899999999999999999999999999874

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.1e-82  Score=662.78  Aligned_cols=346  Identities=41%  Similarity=0.763  Sum_probs=301.1

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-CC
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GS  154 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-~~  154 (499)
                      .|||+||||+++|+.+|||+|||+||++||||+|++ +.++++|++|++||+||+||+||++||+||++++..+.++ +.
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            389999999999999999999999999999999984 6788999999999999999999999999999876432110 11


Q ss_pred             CCCcc-----------------CCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeee
Q 010831          155 SAYTT-----------------NPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEF  217 (499)
Q Consensus       155 ~~~~~-----------------~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i  217 (499)
                      ++|..                 .+.|+|+.|||+..+++++       .....+..++.|+.+.|.|||+|+|+|+++++
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~-------~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i  153 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGM-------RGGPAGARQGASKKVHITLSFEEAAKGVEKEL  153 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccc-------cccCCCcCCCCCeEEEEEEEHHHHhCCeeEEE
Confidence            11100                 0125566666521001110       00011235789999999999999999999999


Q ss_pred             ecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeE
Q 010831          218 ELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNI  297 (499)
Q Consensus       218 ~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l  297 (499)
                      .+++.+.|+.|+|+|.+.+..+.+|+.|+|+|.++..+    |+|++.++|+.|+|+|+++.++|..|+|.|++.+.++|
T Consensus       154 ~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l  229 (391)
T PRK14284        154 LVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSV  229 (391)
T ss_pred             EEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEE
Confidence            99999999999999999999999999999999887543    77888899999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccC--CeEe
Q 010831          298 KVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE--GISE  375 (499)
Q Consensus       298 ~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tld--G~~~  375 (499)
                      +|.||||+++|++|+|+|+|+++++++++|||||+|+|++|+.|+|+|+|||+++.|+|.+|++|++++|+|||  +.++
T Consensus       230 ~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~  309 (391)
T PRK14284        230 HVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCR  309 (391)
T ss_pred             EEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEE
Confidence            99999999999999999999999888999999999999999999999999999999999999999999999999  5679


Q ss_pred             EEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          376 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       376 l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      |+||+|+++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       310 v~Ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  367 (391)
T PRK14284        310 LTIPEGIQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATE  367 (391)
T ss_pred             EEECCccCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999999998654 368999999999999999999999999998753

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=5.4e-82  Score=663.94  Aligned_cols=334  Identities=33%  Similarity=0.611  Sum_probs=298.8

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS  154 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~  154 (499)
                      ...|||+||||+++||.+|||+|||+||++||||+|++   .++|++|++||+||+||+||++||+||++++.++.  + 
T Consensus        26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~--~-   99 (421)
T PTZ00037         26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE--Q-   99 (421)
T ss_pred             cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC--C-
Confidence            36799999999999999999999999999999999853   58999999999999999999999999998775321  1 


Q ss_pred             CCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCcccc
Q 010831          155 SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAK  234 (499)
Q Consensus       155 ~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~  234 (499)
                         ..++.|+|+.|||+   +.         +  +.+..+|.|+.+.|.|||+|+|+|++++|.+++.+.|+.|+|+|..
T Consensus       100 ---~~d~~d~f~~~Fgg---g~---------~--~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~  162 (421)
T PTZ00037        100 ---PADASDLFDLIFGG---GR---------K--PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGP  162 (421)
T ss_pred             ---CcchhhhHHHhhcc---cc---------c--cccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCC
Confidence               13567889988873   10         0  0123468999999999999999999999999999999999999986


Q ss_pred             cCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc--eeeeeccCceEEEeeeeEEEEeCCCCCCCCEEE
Q 010831          235 MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       235 ~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                      .+ .+.+|+.|+|+|.+++..+.++..+++.++|+.|+|+|++|.  ++|..|+|.|++.+.++|+|+||+|+.+|++|+
T Consensus       163 ~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~  241 (421)
T PTZ00037        163 KD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKIT  241 (421)
T ss_pred             CC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEE
Confidence            55 578999999999988777665523345689999999999986  899999999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEE
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLV  389 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~  389 (499)
                      |+|+|++.+ ++.||||||+|++++|+.|+|+|+|||+++.|+|.|||||+++.|+||||+ +.|+||+|  ++||++++
T Consensus       242 ~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~  320 (421)
T PTZ00037        242 FHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKV  320 (421)
T ss_pred             EecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEE
Confidence            999999976 578999999999999999999999999999999999999999999999997 78999998  99999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcC--CCCCHHHHHHHHHHHhh
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIP--NRISAKERELLEELASL  433 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P--~~Ls~~q~~lL~~l~~~  433 (499)
                      |+|+|||..++++.+|||||+|+|+||  +.||++|+++|++|+..
T Consensus       321 I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~  366 (421)
T PTZ00037        321 INNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ  366 (421)
T ss_pred             eCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence            999999987655578999999999999  99999999999999864

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.5e-82  Score=660.27  Aligned_cols=353  Identities=37%  Similarity=0.692  Sum_probs=298.5

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC--
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG--  151 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~--  151 (499)
                      +.+|||+||||+++|+.+|||+|||+||++||||+|+ ++.++++|++|++||+|||||+||++||+||+++...+..  
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~   86 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR   86 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence            4689999999999999999999999999999999997 4578999999999999999999999999999753221110  


Q ss_pred             -----CCCCCCccC----CCCccccccCCC----CCCC----CCCCCCCCCcccccccccCcceEEeeeeccccccccee
Q 010831          152 -----GGSSAYTTN----PFDLFETFFGPS----MGGF----PGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAE  214 (499)
Q Consensus       152 -----g~~~~~~~~----~~diF~~fFg~~----~gg~----~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~  214 (499)
                           ++.++|..+    .+| |++||+..    +++|    +++.+.+.+..+..+..++.|+++.|.|+|+|+|+|++
T Consensus        87 ~~~~~~~~~g~~~~~~~~~~d-~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~  165 (392)
T PRK14279         87 RFDGGGGFGGFGTGGDGAEFN-LNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVT  165 (392)
T ss_pred             cccCCCCCCCccccccccCcC-hhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeE
Confidence                 011111100    011 22333211    0001    11000000001112345789999999999999999999


Q ss_pred             eeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEee
Q 010831          215 KEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLK  294 (499)
Q Consensus       215 k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~  294 (499)
                      ++|.+++.+.|+.|+|+|...+..+.+|+.|+|+|.++..+    |+|++.++|+.|+|+|++|.++|..|+|.|++.+.
T Consensus       166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~  241 (392)
T PRK14279        166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRT  241 (392)
T ss_pred             EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEe
Confidence            99999999999999999999998999999999999887653    67778899999999999999999999999999999


Q ss_pred             eeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeE
Q 010831          295 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS  374 (499)
Q Consensus       295 k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~  374 (499)
                      ++++|.||+|+++|++|+|+|+|++.++++++|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||++
T Consensus       242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i  321 (392)
T PRK14279        242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV  321 (392)
T ss_pred             eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence            99999999999999999999999998888889999999999999999999999999999999999999999999999999


Q ss_pred             eEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          375 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       375 ~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +|+||+|+++|++++|+|+|||...  +.+|||||+|+|+||++|+++|+++|++|+++.
T Consensus       322 ~v~Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~  379 (392)
T PRK14279        322 GVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE  379 (392)
T ss_pred             EEEECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999999999632  468999999999999999999999999999863

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.5e-81  Score=651.10  Aligned_cols=346  Identities=33%  Similarity=0.665  Sum_probs=306.3

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-C
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-G  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-~  153 (499)
                      ..|||+||||+++||.+|||+|||+||++||||+|+. +.++++|++|++||+||+||.+|+.||+||+++++++.++ +
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            5799999999999999999999999999999999974 6788999999999999999999999999999887643211 1


Q ss_pred             C-CCC---c---cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecc
Q 010831          154 S-SAY---T---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCE  226 (499)
Q Consensus       154 ~-~~~---~---~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~  226 (499)
                      . +++   .   .++.|+|++|||+..   +.        .+..+..++.|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~---~~--------~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~  150 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGNR---GQ--------DKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE  150 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCCc---CC--------CCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence            1 111   1   123467777776311   00        0111235789999999999999999999999999999999


Q ss_pred             cccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCC
Q 010831          227 VCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS  306 (499)
Q Consensus       227 ~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  306 (499)
                      .|+|+|...+..+.+|+.|+|+|+++.    .+|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|++
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~  226 (365)
T PRK14285        151 SCLGKKSEKGTSPSICNMCNGSGRVMQ----GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGID  226 (365)
T ss_pred             CCCCcccCCCCCCccCCCccCceeEEe----cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCC
Confidence            999999999998999999999998764    4588888899999999999999999999999999999999999999999


Q ss_pred             CCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCC
Q 010831          307 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPG  385 (499)
Q Consensus       307 ~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g  385 (499)
                      +|++|+|+|+|++.++++.+|||||+|++++|+.|+|+|+|||++++|+|.|||+|+++.|+||||+ ++|+||+|+++|
T Consensus       227 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g  306 (365)
T PRK14285        227 DNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTEND  306 (365)
T ss_pred             CCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCC
Confidence            9999999999999887788999999999999999999999999999999999999999999999996 799999999999


Q ss_pred             cEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcCCC
Q 010831          386 DVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT  437 (499)
Q Consensus       386 ~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~~~  437 (499)
                      ++++|+|+|||..+.. .+|||||+|+|++|+.|+.+|+++|++|++...+-
T Consensus       307 ~~irl~GkG~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~~  357 (365)
T PRK14285        307 EQIIIKNEGMPILHTE-KFGNLILIIKIKTPKNLNSNAIKLLENLSKELKDI  357 (365)
T ss_pred             cEEEECCCCccCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhccc
Confidence            9999999999976543 57999999999999999999999999999887653

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.1e-81  Score=653.37  Aligned_cols=354  Identities=42%  Similarity=0.745  Sum_probs=302.0

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhccc----ccccCcccc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQ----YGEAGVKST  149 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~----~G~~~~~~~  149 (499)
                      |..|||+||||+++|+.+|||+|||+||++||||+|+. +.++++|++|++||+||+||.+|++||+    ||++++..+
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            56899999999999999999999999999999999974 5689999999999999999999999999    999887632


Q ss_pred             cC-CCCCCCccCCCCccccccCCC-CCCCC----CCCCCCCCc-ccccccccCcceEEeeeecccccccceeeeeeccee
Q 010831          150 VG-GGSSAYTTNPFDLFETFFGPS-MGGFP----GMNQTGFRT-RRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHL  222 (499)
Q Consensus       150 ~~-g~~~~~~~~~~diF~~fFg~~-~gg~~----~~~~~~~~~-~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~  222 (499)
                      .+ ++.++|.+++.++|..+++.+ +++++    .+....|+. ++..+..++.|+++.|.|||+|+|+|++++|.+++.
T Consensus        87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~  166 (389)
T PRK14295         87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQ  166 (389)
T ss_pred             CCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeecc
Confidence            11 111223333344443322110 00000    000000110 011224578999999999999999999999999999


Q ss_pred             eecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeC
Q 010831          223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVP  302 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP  302 (499)
                      +.|++|+|+|.+.+..+.+|+.|+|+|.++..+    |+|++.++|+.|+|+|+++.++|..|.|.|++.+.++++|.||
T Consensus       167 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip  242 (389)
T PRK14295        167 APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIP  242 (389)
T ss_pred             ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeC
Confidence            999999999999999899999999999987653    6777889999999999999999999999999999999999999


Q ss_pred             CCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCC-eEeEEeCCC
Q 010831          303 PGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPG  381 (499)
Q Consensus       303 ~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~g  381 (499)
                      +|+++|++|+|+|+|++.+.++.+|||||+|+|++|+.|+|+|+|||+++.|+|.+||+|++++|+|||| .++|+||+|
T Consensus       243 ~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g  322 (389)
T PRK14295        243 AGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPG  322 (389)
T ss_pred             CCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCc
Confidence            9999999999999999987788899999999999999999999999999999999999999999999999 579999999


Q ss_pred             CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       382 tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      +++|++++|+|+|||..+  +.+|||||+|+|.||+.|+++|+++|++|++..
T Consensus       323 ~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~  373 (389)
T PRK14295        323 TPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFREAT  373 (389)
T ss_pred             cCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999999999743  458999999999999999999999999999754

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.9e-81  Score=650.01  Aligned_cols=345  Identities=44%  Similarity=0.795  Sum_probs=302.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|++ ++++++|++|++||+||+||.+|+.||+||+++++++++  +
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~--~   80 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG--F   80 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCC--C
Confidence            4799999999999999999999999999999999974 568899999999999999999999999999988764211  1


Q ss_pred             CCCc--cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCcc
Q 010831          155 SAYT--TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTG  232 (499)
Q Consensus       155 ~~~~--~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG  232 (499)
                      ++|.  .++|+.|++||+..||+ ++.+     ..+..+..++.|+.+.|.|+|+|+|+|+++++.+++.+.|+.|+|+|
T Consensus        81 ~g~~~~~~~~~~f~d~f~~~fg~-g~~~-----~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G  154 (373)
T PRK14301         81 GGFSSAEDIFSHFSDIFGDLFGF-SGGG-----SRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSG  154 (373)
T ss_pred             CCcccccccccchHHHHHHHhhc-cCcc-----cccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcc
Confidence            2221  12233333344322221 0100     00112245789999999999999999999999999999999999999


Q ss_pred             cccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEE
Q 010831          233 AKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       233 ~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                      ...+..+.+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|+||+|+++|++|+
T Consensus       155 ~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~  230 (373)
T PRK14301        155 AAPGTSPETCRHCGGSGQVRQSQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLR  230 (373)
T ss_pred             cCCCCCCcccCCccCeeEEEEEe----eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEE
Confidence            99998899999999999886542    77888899999999999999999999999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEecc
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAK  392 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G  392 (499)
                      |+|+|++++.++++|||||+|+|++|+.|+|+|+|||++++|+|.+||+|+++.|+||||+++|+||+|+++|++++|+|
T Consensus       231 ~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~ri~g  310 (373)
T PRK14301        231 LRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRLRG  310 (373)
T ss_pred             EeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEEEcC
Confidence            99999998877889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          393 KGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       393 ~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      +|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+.+
T Consensus       311 ~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~  350 (373)
T PRK14301        311 KGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEAL  350 (373)
T ss_pred             CCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99998654 36899999999999999999999999999975

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-80  Score=647.80  Aligned_cols=349  Identities=44%  Similarity=0.799  Sum_probs=308.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc-C-
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV-G-  151 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~-~-  151 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+.  +.++++|++|++||+||+||++|++||+||++++.... + 
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            4799999999999999999999999999999999974  46889999999999999999999999999988764211 0 


Q ss_pred             CCCCCC-c-----c-CC--CCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeeccee
Q 010831          152 GGSSAY-T-----T-NP--FDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHL  222 (499)
Q Consensus       152 g~~~~~-~-----~-~~--~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~  222 (499)
                      ++.++| .     + ++  .|+|+.|||++    ++.      ...+.+..+++|+++.|.|||+|+|+|+++++.+++.
T Consensus        83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~----~~~------~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~  152 (369)
T PRK14282         83 ESGGGFFEDIFKDFENIFNRDIFDIFFGER----RTQ------EEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRY  152 (369)
T ss_pred             CCCCcccccccccccccccchhhhHhhccc----CCc------ccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeec
Confidence            111111 1     0 11  15666666521    110      0011223578999999999999999999999999999


Q ss_pred             eecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeC
Q 010831          223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVP  302 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP  302 (499)
                      +.|+.|+|+|...+..+.+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++|+|.||
T Consensus       153 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip  232 (369)
T PRK14282        153 ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIP  232 (369)
T ss_pred             ccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeC
Confidence            99999999999999889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC
Q 010831          303 PGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG  381 (499)
Q Consensus       303 ~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g  381 (499)
                      +|+.+|++|+|+|+|++++.++++|||||+|+|++|+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+|
T Consensus       233 ~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g  312 (369)
T PRK14282        233 AGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPG  312 (369)
T ss_pred             CCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCC
Confidence            99999999999999999888889999999999999999999999999999999999999999999999997 79999999


Q ss_pred             CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 010831          382 TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  435 (499)
Q Consensus       382 tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~  435 (499)
                      +++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|++++.
T Consensus       313 ~~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~~  365 (369)
T PRK14282        313 TQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKRG  365 (369)
T ss_pred             cCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999997543 3589999999999999999999999999998644

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.6e-80  Score=645.32  Aligned_cols=346  Identities=40%  Similarity=0.764  Sum_probs=305.7

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc--C--
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV--G--  151 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~--~--  151 (499)
                      ..|||+||||+++||.+|||+|||+||++||||+++++.++++|++|++||+||+||.+|+.||+||++++..+.  +  
T Consensus         2 ~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~   81 (372)
T PRK14300          2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG   81 (372)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence            479999999999999999999999999999999998778899999999999999999999999999998775321  1  


Q ss_pred             CCCCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCc
Q 010831          152 GGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGT  231 (499)
Q Consensus       152 g~~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~Gs  231 (499)
                      ++.++|..++.++|++||+..+|+.+.       ..+.....++.|+.+.|.|+|+|+|+|++++|.+.+.+.|+.|+|+
T Consensus        82 g~~~~~~~~~~~~f~~~f~~~~gg~~~-------~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~  154 (372)
T PRK14300         82 GNHGGFHPDINDIFGDFFSDFMGGSRR-------SRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGS  154 (372)
T ss_pred             CCCCccccchhhhHHHHHHhhcCCCCC-------CCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCc
Confidence            111222223446788888753332100       0111112478999999999999999999999999999999999999


Q ss_pred             ccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEE
Q 010831          232 GAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL  311 (499)
Q Consensus       232 G~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~I  311 (499)
                      |...+..+.+|+.|+|+|.++..    +|++++..+|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++|
T Consensus       155 g~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  230 (372)
T PRK14300        155 GSEKGETVTTCDACSGVGATRMQ----QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI  230 (372)
T ss_pred             ccCCCCCCccCCCccCeEEEEEe----eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence            99999889999999999987653    37888889999999999999999999999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCC-eEeEEeCCCCCCCcEEEe
Q 010831          312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLVL  390 (499)
Q Consensus       312 rl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~gtq~g~~~~l  390 (499)
                      +|+|+|+++..++.+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+|| .++|+||+|+++|++++|
T Consensus       231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri  310 (372)
T PRK14300        231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL  310 (372)
T ss_pred             EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence            9999999987788899999999999999999999999999999999999999999999998 579999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          391 AKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       391 ~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      +|+|||..+. ..+|||||+|+|.+|+.||++|+++|++|+++
T Consensus       311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~  352 (372)
T PRK14300        311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKE  352 (372)
T ss_pred             CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999997653 36899999999999999999999999999863

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-80  Score=644.54  Aligned_cols=345  Identities=49%  Similarity=0.882  Sum_probs=305.0

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|+.||+||+++++++..++.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~~   82 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGF   82 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCCc
Confidence            479999999999999999999999999999999998 4678899999999999999999999999999988763211111


Q ss_pred             CCCc---cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCc
Q 010831          155 SAYT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGT  231 (499)
Q Consensus       155 ~~~~---~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~Gs  231 (499)
                      ++|.   .++.|+|++|||.  |++++       .....+..+++|+++.|.|+|+|+|+|+++++.+.+.+.|+.|+|+
T Consensus        83 ~~~~~~~~~~~d~f~~~fg~--g~~~~-------~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~  153 (366)
T PRK14294         83 SGFDDIFSSFGDIFEDFFGF--GGGRR-------GRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGS  153 (366)
T ss_pred             CccccchhhhhhhHHHhhcc--CCCcC-------CcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCc
Confidence            2221   1234677777761  11100       0011123578999999999999999999999999999999999999


Q ss_pred             ccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEE
Q 010831          232 GAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL  311 (499)
Q Consensus       232 G~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~I  311 (499)
                      |...+..+.+|+.|+|+|.++..    .|+|++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++|
T Consensus       154 G~~~~~~~~~C~~C~G~G~~~~~----~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i  229 (366)
T PRK14294        154 GCEPGTSPTTCPQCGGSGQVTQS----QGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRL  229 (366)
T ss_pred             cccCCCCcccCCCcCCeEEEEEE----eeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEE
Confidence            99998889999999999988653    27788889999999999999999999999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEec
Q 010831          312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLA  391 (499)
Q Consensus       312 rl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~  391 (499)
                      +|+|+|++++.++.+|||||+|+|++|+.|+|+|+|||+++.|+|.+||+|+++.|+||||++.|+||+|+++|++++|+
T Consensus       230 ~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~  309 (366)
T PRK14294        230 RLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFK  309 (366)
T ss_pred             EEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEEC
Confidence            99999999877888999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             cCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          392 KKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       392 G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      |+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|+++.
T Consensus       310 G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  351 (366)
T PRK14294        310 GKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLE  351 (366)
T ss_pred             CCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            999997654 368999999999999999999999999999864

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-79  Score=639.37  Aligned_cols=344  Identities=44%  Similarity=0.811  Sum_probs=302.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC-CC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG-GG  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~-g~  153 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|+.||+||++++..+.+ ++
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG   82 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence            479999999999999999999999999999999997 4568899999999999999999999999999988763321 11


Q ss_pred             CCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccc
Q 010831          154 SSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGA  233 (499)
Q Consensus       154 ~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~  233 (499)
                      .+++ .++.|+|++||+..||+.++       . .+.+..++.|+.+.|.|||+|+|+|++++|.+++.+.|+.|+|+|.
T Consensus        83 ~~~~-~~~~~~f~~~f~~~fgg~~~-------~-~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~  153 (371)
T PRK10767         83 FGGG-GGFGDIFGDIFGDIFGGGRG-------G-GRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGA  153 (371)
T ss_pred             CCCc-cccccchhhhhhhhccCCcc-------c-cCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCccc
Confidence            1111 11224455555443322100       0 1112457899999999999999999999999999999999999999


Q ss_pred             ccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEE
Q 010831          234 KMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       234 ~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                      ..+....+|+.|+|+|.++..+    |++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++|+|
T Consensus       154 ~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~  229 (371)
T PRK10767        154 KPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRL  229 (371)
T ss_pred             CCCCCCccCCCCCCeeEEEEee----ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEE
Confidence            9998889999999999876543    777778999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccC
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKK  393 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~  393 (499)
                      +|+|+++..++.+|||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||.++|+||+|+++|++++|+|+
T Consensus       230 ~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~  309 (371)
T PRK10767        230 SGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGK  309 (371)
T ss_pred             ecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEECCC
Confidence            99999987778899999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          394 GAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       394 GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      |||..+. ..+|||||+|+|.+|+.|+.+|+++|++|++.
T Consensus       310 G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~  348 (371)
T PRK10767        310 GVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES  348 (371)
T ss_pred             CcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9997654 36899999999999999999999999999974

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.1e-79  Score=637.89  Aligned_cols=355  Identities=43%  Similarity=0.725  Sum_probs=309.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC-CC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG-GG  153 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~-g~  153 (499)
                      ..|||++|||+++|+.+|||+|||+||++||||+|+. ++++++|++|++||++|+||.+|++||+||+++++.+.+ ++
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~~   83 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG   83 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCCC
Confidence            5799999999999999999999999999999999974 578999999999999999999999999999987753211 11


Q ss_pred             CCCCccCCCCccc---cccCCCCCCCCCCCCCCCCcc-cccccccCcceEEeeeecccccccceeeeeecceeeeccccc
Q 010831          154 SSAYTTNPFDLFE---TFFGPSMGGFPGMNQTGFRTR-RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCT  229 (499)
Q Consensus       154 ~~~~~~~~~diF~---~fFg~~~gg~~~~~~~~~~~~-~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~  229 (499)
                      +++...++.++|.   ++|++.++++++++  .+... ...+..++.|+++.|.|+|+|+|+|++++|.+++.+.|+.|+
T Consensus        84 ~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~--~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  161 (386)
T PRK14289         84 FSGEGMSMEDIFSMFGDIFGGHGGGFGGFG--GFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH  161 (386)
T ss_pred             CCCCCcChhhhhHHhhhhhcccccCccccc--ccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence            1110112334443   33654332221110  01111 111235789999999999999999999999999999999999


Q ss_pred             CcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCC
Q 010831          230 GTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       230 GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  309 (499)
                      |+|........+|+.|+|+|.++..+++++|++++..+|+.|+|+|+++.++|..|+|.|++.+.++++|+||+|+++|+
T Consensus       162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  241 (386)
T PRK14289        162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM  241 (386)
T ss_pred             CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCC
Confidence            99999888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEE
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLV  389 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~  389 (499)
                      +|+|+|+|++.+.++.+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+++|+||+|+++|++++
T Consensus       242 ~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~r  321 (386)
T PRK14289        242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVLR  321 (386)
T ss_pred             EEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEEE
Confidence            99999999998777889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      |+|+|||..++ ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       322 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~  364 (386)
T PRK14289        322 LRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS  364 (386)
T ss_pred             ECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            99999997654 36899999999999999999999999999985

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=4.5e-79  Score=633.21  Aligned_cols=346  Identities=53%  Similarity=0.926  Sum_probs=310.5

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC---CC
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG---GS  154 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g---~~  154 (499)
                      |||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|+.||+||+++++.+.++   +.
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~   80 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF   80 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence            799999999999999999999999999999999877889999999999999999999999999999887642211   11


Q ss_pred             CCCc----cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccC
Q 010831          155 SAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTG  230 (499)
Q Consensus       155 ~~~~----~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~G  230 (499)
                      .++.    .++.|+|+.|||+++|+  +       ..+..+..+++|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|
T Consensus        81 ~~~~~~~~~~~~~~f~~~fg~~~g~--~-------~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G  151 (354)
T TIGR02349        81 NGFDIGFFGDFGDIFGDFFGGGGGS--G-------RRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHG  151 (354)
T ss_pred             CCccccCcCchhhhHHHHhccCccc--C-------ccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCC
Confidence            1111    13447788888742110  0       011123457899999999999999999999999999999999999


Q ss_pred             cccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCE
Q 010831          231 TGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       231 sG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  310 (499)
                      +|...+....+|+.|+|+|.++..+++++|++++.++|+.|+|+|+++.++|..|+|.|++.+.++++|.||+|+++|++
T Consensus       152 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  231 (354)
T TIGR02349       152 TGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQR  231 (354)
T ss_pred             CCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCE
Confidence            99998888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEe
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVL  390 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l  390 (499)
                      |+|+|+|++.+.++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||.++|+||+++++|++++|
T Consensus       232 i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i  311 (354)
T TIGR02349       232 LRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRL  311 (354)
T ss_pred             EEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEEE
Confidence            99999999977778899999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          391 AKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       391 ~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      +|+|||..+.. .+|||||+|+|.+|+.|+.+|+++|++|++.
T Consensus       312 ~g~G~p~~~~~-~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       312 KGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             CCCCcCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999976543 6899999999999999999999999999864

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.1e-79  Score=637.63  Aligned_cols=356  Identities=41%  Similarity=0.765  Sum_probs=305.7

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC--C
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG--G  152 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~--g  152 (499)
                      |..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||++++..+.+  +
T Consensus         1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~   80 (382)
T PRK14291          1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ   80 (382)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence            35799999999999999999999999999999999988889999999999999999999999999999987753211  1


Q ss_pred             CCCCCc----cCCCCccccccCCC-CCC-CCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecc
Q 010831          153 GSSAYT----TNPFDLFETFFGPS-MGG-FPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCE  226 (499)
Q Consensus       153 ~~~~~~----~~~~diF~~fFg~~-~gg-~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~  226 (499)
                      +.++|.    .++.|+|.+||+.. +++ |++++....++....+..++.|+.+.|.|||+|+|+|+++++.+++.+.|+
T Consensus        81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  160 (382)
T PRK14291         81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE  160 (382)
T ss_pred             cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence            111221    23446777775321 011 111100000000112235789999999999999999999999999999999


Q ss_pred             cccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCC
Q 010831          227 VCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS  306 (499)
Q Consensus       227 ~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~  306 (499)
                      .|+|+|...+....+|+.|+|+|.++..    .|++++.++|+.|+|+|. +.++|..|+|.|++.+.++|+|+||||+.
T Consensus       161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  235 (382)
T PRK14291        161 ACGGTGYDPGSGEKVCPTCGGSGEIYQR----GGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVD  235 (382)
T ss_pred             CCccccCCCCCCCccCCCCCCceEEEEe----cceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCC
Confidence            9999999999999999999999988664    367777899999999994 78999999999999999999999999999


Q ss_pred             CCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCC
Q 010831          307 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPG  385 (499)
Q Consensus       307 ~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g  385 (499)
                      +|++|+|+|+|++++.++.+|||||+|++++|+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+|+++|
T Consensus       236 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G  315 (382)
T PRK14291        236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEG  315 (382)
T ss_pred             CCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCC
Confidence            9999999999999888899999999999999999999999999999999999999999999999996 799999999999


Q ss_pred             cEEEeccCCCCCCCCCCCCCcEEEEEEEEcCC--CCC------HHHHHHHHHHHhhcCC
Q 010831          386 DVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPN--RIS------AKERELLEELASLRNT  436 (499)
Q Consensus       386 ~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~--~Ls------~~q~~lL~~l~~~~~~  436 (499)
                      ++++|+|+|||..+. ..+|||||+|+|+||+  .||      ++|++||++|++++..
T Consensus       316 ~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~~~  373 (382)
T PRK14291        316 DKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLLPE  373 (382)
T ss_pred             CEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhcCC
Confidence            999999999998654 3689999999999998  599      9999999999987653

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-78  Score=633.85  Aligned_cols=351  Identities=44%  Similarity=0.798  Sum_probs=305.4

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSS  155 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~~  155 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||++++.+. +. .+
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~-~~-~~   81 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF-SQ-ED   81 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc-cc-cc
Confidence            57999999999999999999999999999999999888899999999999999999999999999999876521 10 01


Q ss_pred             CCc-cCCCCccccccCCCCCC-CCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccc
Q 010831          156 AYT-TNPFDLFETFFGPSMGG-FPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGA  233 (499)
Q Consensus       156 ~~~-~~~~diF~~fFg~~~gg-~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~  233 (499)
                      .|. .++.++|..|+++ ++. |..+   +|++....+..++.|+.++|.|+|+|+|+|+++++.+++.+.|+.|+|+|.
T Consensus        82 ~~~~~~~~~~~~~~~~~-~~~~f~~~---~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~  157 (378)
T PRK14283         82 IFNNINFEDIFQGFGFG-IGNIFDMF---GFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRA  157 (378)
T ss_pred             cccccCccccccccccc-hhhhcccc---ccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCcccc
Confidence            010 1122333332210 000 0000   000000112347899999999999999999999999999999999999999


Q ss_pred             ccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEE
Q 010831          234 KMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       234 ~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                      ..+....+|+.|+|+|.++..+++.+|++++..+|+.|+|+|+.+.++|..|+|.|.+.+.++++|.||+|+++|++|+|
T Consensus       158 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l  237 (378)
T PRK14283        158 EPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV  237 (378)
T ss_pred             CCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence            99888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccC
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKK  393 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~  393 (499)
                      +|+|++.+.++.+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||.+.|+||+|+++|++++|+|+
T Consensus       238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~  317 (378)
T PRK14283        238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH  317 (378)
T ss_pred             eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence            99999987778899999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 010831          394 GAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  433 (499)
Q Consensus       394 GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~  433 (499)
                      |||.... ..+|||||+|+|+||+.|+++|+++|++|++.
T Consensus       318 G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~  356 (378)
T PRK14283        318 GMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI  356 (378)
T ss_pred             CCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            9997653 36899999999999999999999999999865

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3e-78  Score=630.47  Aligned_cols=354  Identities=57%  Similarity=1.001  Sum_probs=313.4

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC-CCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG-GGS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~-g~~  154 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||+++++++.+ ++.
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~   81 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM   81 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence            5799999999999999999999999999999999988889999999999999999999999999999987753211 011


Q ss_pred             CCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCcccc
Q 010831          155 SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAK  234 (499)
Q Consensus       155 ~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~  234 (499)
                      +++ .++.|+|++|||+. +++   ++.++. .+..+..++.|+.+.|.|+|+|+|.|+++++.+++.+.|+.|+|+|..
T Consensus        82 ~~~-~~~~d~f~~~fg~~-~~~---~~~~~~-~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~  155 (374)
T PRK14293         82 GDM-GGFADIFETFFSGF-GGA---GGQGGR-RRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAK  155 (374)
T ss_pred             ccc-cchHHHHHHHhccc-CCC---CCCCcc-ccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCC
Confidence            111 12347888888631 111   100000 011123578999999999999999999999999999999999999999


Q ss_pred             cCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEc
Q 010831          235 MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV  314 (499)
Q Consensus       235 ~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~  314 (499)
                      .+....+|+.|+|+|.++..+++++|+|++..+|+.|.|+|+++.++|.+|.|.|++.+.++++|.||+|+++|++|+|+
T Consensus       156 ~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~  235 (374)
T PRK14293        156 PGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS  235 (374)
T ss_pred             CCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence            98889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCC
Q 010831          315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKG  394 (499)
Q Consensus       315 G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~G  394 (499)
                      |+|++...++.+|||||+|+|++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++|++++|+|+|
T Consensus       236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G  315 (374)
T PRK14293        236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG  315 (374)
T ss_pred             cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence            99998776778999999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 010831          395 APKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  435 (499)
Q Consensus       395 mP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~  435 (499)
                      ||..+..+.+|||||+|+|++|+.|+++|+++|++|+++.+
T Consensus       316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~~  356 (374)
T PRK14293        316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIKG  356 (374)
T ss_pred             CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            99766544689999999999999999999999999998643

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-78  Score=628.43  Aligned_cols=346  Identities=40%  Similarity=0.728  Sum_probs=306.8

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc-CCCCC
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV-GGGSS  155 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~-~g~~~  155 (499)
                      .|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||+++..+.. +++.+
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~   81 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG   81 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence            58999999999999999999999999999999998888999999999999999999999999999987642211 11112


Q ss_pred             CCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccccc
Q 010831          156 AYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKM  235 (499)
Q Consensus       156 ~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~  235 (499)
                      ++.+++.|+|+.|||+.  ++++    +.  .+ .+..++.|+.+.+.|+|+|+|+|+++++.+++.+.|+.|+|+|...
T Consensus        82 ~~~~d~~d~f~~~fg~~--~~~~----~~--~~-~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~  152 (371)
T PRK14292         82 GMGFDPMDIFEQLFGGA--GFGG----GR--GR-RGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEP  152 (371)
T ss_pred             ccCCChHHHHHHhhCCC--CcCC----CC--Cc-ccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCC
Confidence            22335668899998742  1110    00  00 1235789999999999999999999999999999999999999987


Q ss_pred             Ccc-eeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEc
Q 010831          236 GSK-MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV  314 (499)
Q Consensus       236 g~~-~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~  314 (499)
                      +.. +.+|+.|+|+|.++..+++.+|++++.++|+.|+|+|+.+.++|..|+|.|++.+.++++|.||+|+++|++|+|+
T Consensus       153 ~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~  232 (371)
T PRK14292        153 GGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVA  232 (371)
T ss_pred             CCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEe
Confidence            754 7899999999999888888889999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCC
Q 010831          315 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKG  394 (499)
Q Consensus       315 G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~G  394 (499)
                      |+|++++++.  |||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+|+++|++++|+|+|
T Consensus       233 G~G~~~~~~~--GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G  310 (371)
T PRK14292        233 GMGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQG  310 (371)
T ss_pred             cCcCCCCCCC--CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCC
Confidence            9999976543  99999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          395 APKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       395 mP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      ||..++. .+|||||+|+|.+|+.|+++|+++|++|++..
T Consensus       311 ~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  349 (371)
T PRK14292        311 MPRLQGA-GTGDLIVEYEIAVPKQLSPEAREALEAYARAV  349 (371)
T ss_pred             CCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9976543 57999999999999999999999999998653

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.8e-77  Score=620.32  Aligned_cols=351  Identities=37%  Similarity=0.689  Sum_probs=302.2

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC-
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-  152 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g-  152 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|++.  .++++|++|++||+||+||.+|++||+||+.+++++.++ 
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~   81 (365)
T PRK14290          2 AKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNF   81 (365)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCc
Confidence            46999999999999999999999999999999999753  688999999999999999999999999999877532111 


Q ss_pred             CCCCC--ccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccC
Q 010831          153 GSSAY--TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTG  230 (499)
Q Consensus       153 ~~~~~--~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~G  230 (499)
                      +.+++  ..++.|+|..|||+.+++ ..++  +.+. ......++.|+.+.|.|||+|+|+|++++|.+.+.+.|+.|+|
T Consensus        82 ~~~~~~~~~~~~d~f~~~fg~~~~~-~~~~--~~~~-~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G  157 (365)
T PRK14290         82 NWDNFTHFSDINDIFNQIFGGNFGS-DFFS--GFGN-QQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSG  157 (365)
T ss_pred             cccccccccchhHHHHHHhcCcccc-cccc--cccc-ccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcc
Confidence            10111  124568889998742111 0000  0000 1111234789999999999999999999999999999999999


Q ss_pred             cccccCcceeeccCCCCcceEEEEeeCCccceee--eeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCC
Q 010831          231 TGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQ--VSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTG  308 (499)
Q Consensus       231 sG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~--~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G  308 (499)
                      +|...+ ...+|+.|+|+|.++..+.  +|++.+  ..+|+.|+|.|+++.++|..|+|.|++.+.++++|.||+|+.+|
T Consensus       158 ~g~~~~-~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G  234 (365)
T PRK14290        158 TGAKNG-KLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDN  234 (365)
T ss_pred             ccCCCC-CCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCC
Confidence            999876 6789999999998776653  566543  57999999999999999999999999999999999999999999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEE
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVL  388 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~  388 (499)
                      ++|+|+|+|+.  .++.+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|++|.++|+||+|+++|+++
T Consensus       235 ~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~i  312 (365)
T PRK14290        235 LRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVL  312 (365)
T ss_pred             cEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEE
Confidence            99999999996  4788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhcCC
Q 010831          389 VLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT  436 (499)
Q Consensus       389 ~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~~~  436 (499)
                      +|+|+|||..+.. .+|||||+|+|.+|+.|+++|+++|++|+.+++.
T Consensus       313 ri~g~G~p~~~~~-~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~~  359 (365)
T PRK14290        313 KIKGAGMPHLNGH-GSGDLLVRINVEVPKRLTSKQKELIREFFDIKEN  359 (365)
T ss_pred             EECCCCCCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhhc
Confidence            9999999976543 5899999999999999999999999999987654

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.8e-70  Score=549.80  Aligned_cols=329  Identities=42%  Similarity=0.744  Sum_probs=296.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSS  155 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~~  155 (499)
                      ...||+||||+++||++|||||||+||++||||+|++  +.++|++|++||||||||+||++||+||+++++.+++++  
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~--   78 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG--   78 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC--
Confidence            4679999999999999999999999999999999965  889999999999999999999999999999996543222  


Q ss_pred             CCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccCccccc
Q 010831          156 AYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKM  235 (499)
Q Consensus       156 ~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~  235 (499)
                      ++    +. |++||+  +|+.++        +   +..+|.|+.+.+.|+|+|+|.|.++++.+++...|+.|+|+|.+.
T Consensus        79 g~----~~-f~~~F~--~g~~~~--------~---~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgks  140 (337)
T KOG0712|consen   79 GF----GG-FSQFFG--FGGNGG--------R---GRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKS  140 (337)
T ss_pred             CC----cc-HHHhcc--CCCcCc--------c---ccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCC
Confidence            11    11 888887  222211        1   122399999999999999999999999999999999999999998


Q ss_pred             CcceeeccCCCCcceEEEEeeCCccceeee-eeCCCCCCCCEEE--ceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEE
Q 010831          236 GSKMRICSTCGGRGQVMRTDQTPFGLFSQV-SVCPSCGGEGEVI--SEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       236 g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~-~~C~~C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                      ++.+ .|+.|.|+|..+++.++.+|+.++. ..|..|+|.|.+|  .+.|+.|.|.+++.+.+.++|.|++|+.++++|.
T Consensus       141 g~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~  219 (337)
T KOG0712|consen  141 GSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKIT  219 (337)
T ss_pred             CCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceee
Confidence            8765 8999999999999999999988876 7899999999984  6899999999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEE
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLV  389 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~  389 (499)
                      +.|++++.+ +..+||++|.|..++|+.|.|.|+||++...|++.||++|+...+.||||+ +.|.++||  ++||++++
T Consensus       220 f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~  298 (337)
T KOG0712|consen  220 FKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKR  298 (337)
T ss_pred             eeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEe
Confidence            999999866 556999999999999999999999999999999999999999999999998 58889998  79999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHH
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  431 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~  431 (499)
                      |+|+|||+.+++  +|||||+|+|+||+ |++++...|+.++
T Consensus       299 v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  299 VEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             ecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            999999999886  89999999999999 9999999998763

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.9e-61  Score=484.31  Aligned_cols=275  Identities=43%  Similarity=0.732  Sum_probs=229.8

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC----
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG----  151 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~----  151 (499)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||++|+.||+||++++..+..    
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~   82 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP   82 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence            5799999999999999999999999999999999988889999999999999999999999999999886542110    


Q ss_pred             --CCCCCCc----cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeec
Q 010831          152 --GGSSAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETC  225 (499)
Q Consensus       152 --g~~~~~~----~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C  225 (499)
                        ++.++|.    .++.|+|+.|||+. +++++++ ..+.. .....++|.|+++.+.|+|+|++.|+++++.+.     
T Consensus        83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~-~~~~~~g-~~~~~-~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~-----  154 (291)
T PRK14299         83 GPPGGGDFSGFNVGDFSDFFQQLFGGR-GGFGGFG-DLFGS-VGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA-----  154 (291)
T ss_pred             CCCCCCCccccCcCCHHHHHHHHhCCC-CCCCCcc-ccccc-ccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC-----
Confidence              1111121    13346788888631 1111111 00110 011235789999999999999999998877541     


Q ss_pred             ccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCC
Q 010831          226 EVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGV  305 (499)
Q Consensus       226 ~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv  305 (499)
                                                                                          .++++|+||+|+
T Consensus       155 --------------------------------------------------------------------g~~~~V~Ip~G~  166 (291)
T PRK14299        155 --------------------------------------------------------------------GERLSVRIPPGV  166 (291)
T ss_pred             --------------------------------------------------------------------CEEEEEecCCCc
Confidence                                                                                146889999999


Q ss_pred             CCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCC
Q 010831          306 STGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPG  385 (499)
Q Consensus       306 ~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g  385 (499)
                      ++|++|+++|+|++.      |||||+|++++|+.|+|+|+|||+++.|++.+|++|+++.|+|+||.++|+||+++++|
T Consensus       167 ~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g  240 (291)
T PRK14299        167 REGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAG  240 (291)
T ss_pred             CCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCC
Confidence            999999999999863      99999999999999999999999999999999999999999999999899999999999


Q ss_pred             cEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          386 DVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       386 ~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      ++++|+|+|||..  .+.+|||||+|+|.+|+.|+++|+++|++|+++.
T Consensus       241 ~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~  287 (291)
T PRK14299        241 RKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAELY  287 (291)
T ss_pred             CEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence            9999999999963  2468999999999999999999999999998753

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=1.6e-59  Score=477.65  Aligned_cols=286  Identities=31%  Similarity=0.562  Sum_probs=237.6

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccccc----CcccccC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEA----GVKSTVG  151 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~----~~~~~~~  151 (499)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||..    ++....+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~   82 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ   82 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence            369999999999999999999999999999999998888999999999999999999999999999864    2221111


Q ss_pred             C-CCCCCc-cCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccccc
Q 010831          152 G-GSSAYT-TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCT  229 (499)
Q Consensus       152 g-~~~~~~-~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~  229 (499)
                      . +...+. .++.++|+.|||+.    ++.     .  +.....++.|+.+.+.|+|+|+++|+.+++.+++.+      
T Consensus        83 ~~~~~~~~~~~~~~~f~~~~g~~----~~~-----~--~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~------  145 (306)
T PRK10266         83 HGDGQSFNAEDFDDIFSSIFGQH----ARQ-----S--RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV------  145 (306)
T ss_pred             cCCCCCCCCCCHHHHHHHHhCCC----CCC-----C--CCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc------
Confidence            0 111121 23446777777631    110     0  011234689999999999999999999988876531      


Q ss_pred             CcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCC
Q 010831          230 GTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       230 GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  309 (499)
                                     |.|.|.+..                                      ...++++|.||+|+++|+
T Consensus       146 ---------------~~g~G~~~~--------------------------------------~~~~~~~V~Ip~G~~~G~  172 (306)
T PRK10266        146 ---------------YNAFGMIEQ--------------------------------------EIPKTLNVKIPAGVGNGQ  172 (306)
T ss_pred             ---------------ccCCCeEEE--------------------------------------eeeEEEEEEECCCCcCCc
Confidence                           223332110                                      113679999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEE
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLV  389 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~  389 (499)
                      +|+++|+|++..+++.+|||||+|+|++|+.|+|+|+||++++.|++.+|++|+++.|+|+||++.|+||+++++|++++
T Consensus       173 ~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~r  252 (306)
T PRK10266        173 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLR  252 (306)
T ss_pred             EEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEE
Confidence            99999999998777889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  434 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~~~  434 (499)
                      |+|+|||..+   .+|||||+|+|.+|++|+++|+++|++|+++.
T Consensus       253 i~g~G~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~~  294 (306)
T PRK10266        253 VKGKGLVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADAQ  294 (306)
T ss_pred             ECCCCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999642   48999999999999999999999999999863

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.8e-45  Score=366.62  Aligned_cols=255  Identities=43%  Similarity=0.805  Sum_probs=223.6

Q ss_pred             ccccccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           68 FGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        68 ~~~~~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      ++........|||+||||+++|+.+|||+||++|||+||||.|+++++.++|++|.+|||||+|++||++||++|..+. 
T Consensus        34 ~~~s~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-  112 (288)
T KOG0715|consen   34 FHASRIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-  112 (288)
T ss_pred             eeecccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-
Confidence            3443333344999999999999999999999999999999999999999999999999999999999999999997651 


Q ss_pred             cccCCCCCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccc
Q 010831          148 STVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEV  227 (499)
Q Consensus       148 ~~~~g~~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~  227 (499)
                             +.+..+++++|..+|++.      +          .+...+.++.+++.++|+||.+|..+.+.+.....|.+
T Consensus       113 -------~~~~g~~~~~~~~~~~~~------~----------~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t  169 (288)
T KOG0715|consen  113 -------GEFGGNPFDVFLEFFGGK------M----------NKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCET  169 (288)
T ss_pred             -------ccccCCccchHHHhhccc------c----------cccccCcccccccccCHHHHhhccccceEEEeeccccc
Confidence                   122347899999998740      1          12245678899999999999999999999999999999


Q ss_pred             ccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCC
Q 010831          228 CTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST  307 (499)
Q Consensus       228 C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~  307 (499)
                      |.|.|..++.+...|..|.|+|.+......+|..   . +|..|.|.|.++.+.|..|.|.|.|...+.+.|.||+|+.+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~---~-~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~  245 (288)
T KOG0715|consen  170 CFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFIL---Y-TCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRS  245 (288)
T ss_pred             ccCcCcccccccccchhhhCcccccccccCCcce---e-ecccccccceeccchHHHhhcchhhhhheeEEeecCccccc
Confidence            9999999999999999999999776654444432   2 99999999999999999999999999999999999999999


Q ss_pred             CCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHh
Q 010831          308 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLD  358 (499)
Q Consensus       308 G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~e  358 (499)
                      +.+|++.+.|..        ||+|.+.|.+++.|+|+|.|+++++.|++++
T Consensus       246 ~~~l~~~~~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  246 ADTLRFAGHGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             ccEEEEecCCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            999999998764        9999999999999999999999999999864

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=9.3e-42  Score=367.35  Aligned_cols=125  Identities=17%  Similarity=0.187  Sum_probs=114.2

Q ss_pred             EEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEec
Q 010831          290 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKT  369 (499)
Q Consensus       290 ~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~t  369 (499)
                      .+...++|+|+||+|+++|++|||+|+|+.+++ + +|||||+|++++|+.|+|+|+|||+++.|+|.+||||+++.|+|
T Consensus       692 tvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpg-g-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpT  769 (871)
T TIGR03835       692 TTNEAITLEIQLPITSQLNISAIFKGFGHDFGN-G-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFG  769 (871)
T ss_pred             eeeeeEEEEEecCCCCCCCCEEEeccccCCCCC-C-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeC
Confidence            455678999999999999999999999998653 3 49999999999999999999999999999999999999999999


Q ss_pred             cCCeEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEE-cCCC
Q 010831          370 VEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT-IPNR  418 (499)
Q Consensus       370 ldG~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~-~P~~  418 (499)
                      |||++.|+||+|+++|++++|+|+|||..+  +.||||||+|+|. ++++
T Consensus       770 LDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k~  817 (871)
T TIGR03835       770 PNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMKK  817 (871)
T ss_pred             CCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeecccc
Confidence            999989999999999999999999999543  4689999999997 5554

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2e-43  Score=351.41  Aligned_cols=315  Identities=34%  Similarity=0.490  Sum_probs=241.8

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCccccc
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTV  150 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~  150 (499)
                      .+...+|||+||||+++|+.+|||+||||||++||||+|+ +|.|.++|++|+.||||||||++|+.||+||++++....
T Consensus        11 ~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~   90 (336)
T KOG0713|consen   11 AVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN   90 (336)
T ss_pred             hhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc
Confidence            4556789999999999999999999999999999999999 489999999999999999999999999999999987431


Q ss_pred             CCCCCCCccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeecccccC
Q 010831          151 GGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTG  230 (499)
Q Consensus       151 ~g~~~~~~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~G  230 (499)
                      ..+.++-  +..++|..||+..+..+++.       .......+|.++...+..+++++|.|...+..-...+.|. |.|
T Consensus        91 ~~~~~g~--~~~~~f~~~f~dfg~~~~g~-------~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g  160 (336)
T KOG0713|consen   91 KDGEGGG--GGNDIFSAFFGDFGVTVGGN-------PLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APG  160 (336)
T ss_pred             cccccCC--cccchHHHhhcccccccCCC-------cccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCc
Confidence            0011110  11477777777421111111       1111256899999999999999999987666555544443 222


Q ss_pred             cccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCE
Q 010831          231 TGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       231 sG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~  310 (499)
                      +-           .|+-+ ..+..++...|.+++.+            ...|.+|.+.+.+.++++++|.+..|..+|..
T Consensus       161 ~~-----------~~~~~-~~~~~~~~~~g~~~~~q------------~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~  216 (336)
T KOG0713|consen  161 TR-----------KCNCR-LEMFTQQEGPGRFQMLQ------------EAVCDECPNVKLVLEEDPLEVEFERGDADGPE  216 (336)
T ss_pred             cc-----------ccCCh-hhheeeccCCChhhhhh------------hhhhccCCccceeecCCceeeeeeecccCCce
Confidence            11           11111 11222223333333221            23555555567777889999999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEE
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLV  389 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~  389 (499)
                      .....+|.+.. -+.+||+++.+...+|+.|.|.++||++++.|++.+++.|+..++.++|+. +.+.-..++-|+..++
T Consensus       217 ~~~~~~~~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~  295 (336)
T KOG0713|consen  217 EIFELEGEPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTR  295 (336)
T ss_pred             eeeeccCCcce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhh
Confidence            99999998754 578999999999999999999999999999999999999999999999997 3555556789999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcCC-CCCH
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIPN-RISA  421 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~-~Ls~  421 (499)
                      ..++|||...+....|.++++|.+.+|. .++.
T Consensus       296 ~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  296 KKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hhhccchhhhccchhcceeEEecccCcccccch
Confidence            9999999887767789999999999995 4665

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=1.1e-22  Score=203.38  Aligned_cols=263  Identities=33%  Similarity=0.486  Sum_probs=180.4

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCcccccC-
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVG-  151 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~-  151 (499)
                      |..|||++|+|.+.|+.+|||+||+++|++||||+|+.+  .++++|++|.+||++|+|+.+|..||+||++++.+... 
T Consensus         1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~   80 (306)
T KOG0714|consen    1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF   80 (306)
T ss_pred             CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence            467999999999999999999999999999999999876  56668999999999999999999999999976664211 


Q ss_pred             -CC--CC---CCccCCCCccccccCCCCCCCCC---------------------CCCCCCCcc--------cccccccCc
Q 010831          152 -GG--SS---AYTTNPFDLFETFFGPSMGGFPG---------------------MNQTGFRTR--------RRSTVTKGE  196 (499)
Q Consensus       152 -g~--~~---~~~~~~~diF~~fFg~~~gg~~~---------------------~~~~~~~~~--------~~~~~~~g~  196 (499)
                       +.  .+   ....++.++|.+|||........                     .........        ......+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (306)
T KOG0714|consen   81 SSSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSP  160 (306)
T ss_pred             CCCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCC
Confidence             10  11   11234456788888732110000                     000000000        000000111


Q ss_pred             ceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCE
Q 010831          197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  276 (499)
Q Consensus       197 di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~  276 (499)
                      .+...+.+++++.+.+..+...+.+..                                                     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------  187 (306)
T KOG0714|consen  161 PVEHPLRVSLEDLYKGESKKMKISRQS-----------------------------------------------------  187 (306)
T ss_pred             CccCCcceeHHHhccccceeeeccccc-----------------------------------------------------
Confidence            122222223444444433333222110                                                     


Q ss_pred             EEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEE--eee
Q 010831          277 VISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST--ISI  354 (499)
Q Consensus       277 ~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~--~~I  354 (499)
                        .......    .......+.+.+.+++..|..+....+|+..+. ..|-++++.+..++|..|.++++||+..  ..|
T Consensus       188 --~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~  260 (306)
T KOG0714|consen  188 --FTSNGRE----GSSRSRYLSISIKPGWKEGTKITFPEEGDEEPG-ILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEI  260 (306)
T ss_pred             --ccCCccc----ccCccceeEEeccCCcccccceeccccccccCC-cCcceeEEEEecCCcccccCCCccceeccccee
Confidence              0000000    112356788999999999999999999987653 6788999999999999999999999999  999


Q ss_pred             CHHhhhCCCEEEEeccCCeE-eEEeC-CCCCCCcEEEeccCCCCC
Q 010831          355 SYLDAIMGTVVKVKTVEGIS-ELQVP-PGTQPGDVLVLAKKGAPK  397 (499)
Q Consensus       355 sl~eAllG~~~~I~tldG~~-~l~ip-~gtq~g~~~~l~G~GmP~  397 (499)
                      ++.+|++|....++++++.. .+.+. .-..++...+++++|+|.
T Consensus       261 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  261 SLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             ehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            99999999999999999973 44444 456899999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.86  E-value=7.8e-22  Score=162.53  Aligned_cols=80  Identities=38%  Similarity=0.737  Sum_probs=70.6

Q ss_pred             ceEEEeeeCHHhhhCCCEEEEeccCC-eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHH
Q 010831          347 DLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERE  425 (499)
Q Consensus       347 DL~~~~~Isl~eAllG~~~~I~tldG-~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~  425 (499)
                      |||++++|+++||++|+++.|+|+|| .++|+||+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++||+
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            89999999999999999999999999 67999999999999999999999998776689999999999999999999998


Q ss_pred             H
Q 010831          426 L  426 (499)
Q Consensus       426 l  426 (499)
                      |
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            6

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=1.2e-19  Score=176.15  Aligned_cols=72  Identities=60%  Similarity=0.980  Sum_probs=68.6

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      ..|+|+||||+++|+.++||||||+||++||||++++ |++.++|++||+||+||+||.+|..||.||+.++.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            5689999999999999999999999999999999986 88999999999999999999999999999987765

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=2.6e-18  Score=164.11  Aligned_cols=69  Identities=59%  Similarity=0.862  Sum_probs=64.2

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG--ATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~--~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      .+..|||+||||+++|+..|||+|||++|++||||+++...  ++++|++|++||++|+|+.+|+.||+++
T Consensus         3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            45679999999999999999999999999999999998543  8899999999999999999999999973

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.75  E-value=8.5e-19  Score=194.23  Aligned_cols=77  Identities=36%  Similarity=0.587  Sum_probs=71.0

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      .+....+||+||||+++|+..|||+|||+||++||||+++++.+.++|++|++||+|||||.+|+.||+||.+++..
T Consensus       568 ~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~  644 (1136)
T PTZ00341        568 IEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG  644 (1136)
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence            33456899999999999999999999999999999999987778899999999999999999999999999987653

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.3e-18  Score=178.90  Aligned_cols=73  Identities=55%  Similarity=0.946  Sum_probs=68.5

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP----GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~----~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      +.|||.+|+|+++||.+|||+||||+++.||||+..++    .|++.|+.|.+||||||||++|++||.||+.|++.
T Consensus         8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t   84 (546)
T KOG0718|consen    8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT   84 (546)
T ss_pred             hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence            46899999999999999999999999999999998754    58899999999999999999999999999999983

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=5e-18  Score=174.73  Aligned_cols=74  Identities=50%  Similarity=0.728  Sum_probs=67.7

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .++..||+||||.++|++.|||++||+||++||||+||+  .++.++|+.|+.||+|||||+.|++||..-+.-+.
T Consensus         5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~   80 (508)
T KOG0717|consen    5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILR   80 (508)
T ss_pred             hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhc
Confidence            356789999999999999999999999999999999986  57889999999999999999999999987765444

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.70  E-value=1.2e-17  Score=130.96  Aligned_cols=62  Identities=53%  Similarity=0.879  Sum_probs=59.0

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHhhcchhhhhhhcc
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG--ATEKFKEISAAYEVLSDDKKRAMYD  139 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~--~~~~f~~i~~AY~vLsd~~kR~~YD  139 (499)
                      |||+||||+++++.+|||+||+++++++|||++....  +.+.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6999999999999999999999999999999987654  7899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=1.6e-17  Score=166.56  Aligned_cols=88  Identities=49%  Similarity=0.792  Sum_probs=76.7

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS  154 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~  154 (499)
                      ..|||+||||+.+|+.+||+||||+.|++||||+|| +|.|.++|+++.+||+||+|+.+|+.||.+|..+....     
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~-----   78 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ-----   78 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch-----
Confidence            679999999999999999999999999999999999 58899999999999999999999999999997654321     


Q ss_pred             CCCccCCCCccccccC
Q 010831          155 SAYTTNPFDLFETFFG  170 (499)
Q Consensus       155 ~~~~~~~~diF~~fFg  170 (499)
                       . -.+++++|...|+
T Consensus        79 -~-~~d~~~~~r~~f~   92 (296)
T KOG0691|consen   79 -G-REDQADGFRKKFG   92 (296)
T ss_pred             -h-hhhHHHHHHHHhh
Confidence             0 1355677777776

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.65  E-value=1.8e-16  Score=158.63  Aligned_cols=71  Identities=49%  Similarity=0.764  Sum_probs=64.3

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP----GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~----~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .+|||.||||.++|+..||.|||||||.+||||...++    .++++|..|..|-|||+||++|++||. |++-++
T Consensus       393 kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD  467 (504)
T KOG0624|consen  393 KRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD  467 (504)
T ss_pred             cchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence            67999999999999999999999999999999988764    478999999999999999999999998 554443

>PHA03102 Small T antigen; Reviewed

Probab=99.64  E-value=1.7e-16  Score=144.98  Aligned_cols=83  Identities=24%  Similarity=0.353  Sum_probs=69.7

Q ss_pred             cCcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCCC
Q 010831           77 GDYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS  154 (499)
Q Consensus        77 ~d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~~  154 (499)
                      ..+|+||||+++|  |.+|||+|||++|+++|||+++   .+++|++|++||++|+|+.+|..||.+|........    
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~----   77 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE----   77 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCccccccc----
Confidence            4689999999999  9999999999999999999974   458999999999999999999999999976543210    


Q ss_pred             CCCccCCCCccccccC
Q 010831          155 SAYTTNPFDLFETFFG  170 (499)
Q Consensus       155 ~~~~~~~~diF~~fFg  170 (499)
                          ..+.++|..+||
T Consensus        78 ----~~~~~~f~~~fg   89 (153)
T PHA03102         78 ----DVPSGYVGATFG   89 (153)
T ss_pred             ----ccHHHHhhhhcC
Confidence                125566666665

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=1.8e-16  Score=150.79  Aligned_cols=69  Identities=51%  Similarity=0.828  Sum_probs=63.8

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---cchHHHHHHHHHHHhhcchhhhhhhccccccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE---PGATEKFKEISAAYEVLSDDKKRAMYDQYGEA  144 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~---~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~  144 (499)
                      ..|+|+||||.++|+.+||++||++||+++|||+++.   .++.++|+.++.||.||+|.++|++||+.|.-
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            4599999999999999999999999999999999963   46889999999999999999999999998753

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.60  E-value=1e-15  Score=118.25  Aligned_cols=58  Identities=66%  Similarity=0.950  Sum_probs=53.9

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CcchHHHHHHHHHHHhhcchhhh
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK--EPGATEKFKEISAAYEVLSDDKK  134 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~--~~~~~~~f~~i~~AY~vLsd~~k  134 (499)
                      .|||+||||+++++.++||+||+++++++|||++.  .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999997  46788999999999999999853

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.60  E-value=3.5e-15  Score=153.32  Aligned_cols=118  Identities=33%  Similarity=0.692  Sum_probs=91.4

Q ss_pred             eeeecccccCcccccCcc-------eeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee---------
Q 010831          221 HLETCEVCTGTGAKMGSK-------MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK---------  284 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~~-------~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~---------  284 (499)
                      ..++|++|+|+|.....+       .++|++|+|+|.++.            .+|++|+|.|.+....-.+         
T Consensus       158 ~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~------------~pC~~C~G~G~v~~~~~i~V~IPaGv~~  225 (371)
T COG0484         158 DPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIK------------DPCGKCKGKGRVKKKKSISVNIPAGVDD  225 (371)
T ss_pred             CCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECC------------CCCCCCCCCCeEeeeeEEEEECCCCCcc
Confidence            568999999999643322       689999999998864            7899999999965432222         


Q ss_pred             -----ccCceEE-------------------------------------------------EeeeeEEEEeCCCCCCCCE
Q 010831          285 -----CSGEGRI-------------------------------------------------RLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       285 -----C~G~G~v-------------------------------------------------~~~k~l~V~IP~Gv~~G~~  310 (499)
                           ..|+|..                                                 +....++|+||||+++|++
T Consensus       226 g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~  305 (371)
T COG0484         226 GDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEV  305 (371)
T ss_pred             CCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcE
Confidence                 2222221                                                 2334489999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEE
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  350 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~  350 (499)
                      +||+|+|.+..++...|||||+|+|..+..+......|+.
T Consensus       306 ~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~  345 (371)
T COG0484         306 FRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLE  345 (371)
T ss_pred             EEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHH
Confidence            9999999998888888999999999999887766665543

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.58  E-value=2.7e-15  Score=113.76  Aligned_cols=54  Identities=70%  Similarity=1.073  Sum_probs=51.3

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcch
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSD  131 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd  131 (499)
                      |||+||||+++++.++||++||+|+++||||++.. +.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            69999999999999999999999999999999976 6688999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=2.4e-15  Score=142.09  Aligned_cols=72  Identities=42%  Similarity=0.676  Sum_probs=66.7

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      ..|+||||||++.|++.|||||||+|.++||||++++ .+.++.|.+|+.||+.|+|+..|..|..||+....
T Consensus        98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp  170 (230)
T KOG0721|consen   98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP  170 (230)
T ss_pred             cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence            4599999999999999999999999999999999987 67788899999999999999999999999987543

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.55  E-value=8.4e-15  Score=115.99  Aligned_cols=65  Identities=49%  Similarity=1.107  Sum_probs=55.7

Q ss_pred             cccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEE-ceeeeeccCce
Q 010831          225 CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI-SEYCRKCSGEG  289 (499)
Q Consensus       225 C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i-~~~C~~C~G~G  289 (499)
                      |+.|+|+|++++..+.+|+.|+|+|++++.++++++++++.++|+.|+|+|++| .++|+.|+|+|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            899999999999999999999999999999999999999999999999999999 99999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.50  E-value=1.3e-14  Score=148.45  Aligned_cols=89  Identities=43%  Similarity=0.676  Sum_probs=73.0

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG  152 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g  152 (499)
                      .-+|||.||||+++|+..|||+|||++|+.+|||+|..  .+++.+|++|-+||.+|+||.+|..||..- .--..+ ++
T Consensus       371 kRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~-dle~~~-~~  448 (486)
T KOG0550|consen  371 KRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQ-DLEEVG-SG  448 (486)
T ss_pred             hhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccccc-chhhhc-CC
Confidence            35799999999999999999999999999999999863  578899999999999999999999999732 211111 11


Q ss_pred             CCCCCccCCCCccccc
Q 010831          153 GSSAYTTNPFDLFETF  168 (499)
Q Consensus       153 ~~~~~~~~~~diF~~f  168 (499)
                      + +  +++|+++|..|
T Consensus       449 ~-a--~~dp~~~~~a~  461 (486)
T KOG0550|consen  449 G-A--GFDPFNIFRAF  461 (486)
T ss_pred             C-c--CcChhhhhhhc
Confidence            1 2  45888888877

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=2.6e-13  Score=142.18  Aligned_cols=119  Identities=34%  Similarity=0.686  Sum_probs=89.8

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-----------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-----------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-----------  285 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            ..|+.|+|.|.+......+.           
T Consensus       159 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  226 (371)
T PRK10767        159 PKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK------------DPCKKCHGQGRVEKEKTLSVKIPAGVDTGDR  226 (371)
T ss_pred             CccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC------------CCCCCCCCCceEeeeeeEEEecCCCCCCCcE
Confidence            457999999996421     23568999999998753            67999999998654321111           


Q ss_pred             ---cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCCEEEE
Q 010831          286 ---SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       286 ---~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                         .|.          |.+                                       .....++|+||+|+++|++++|
T Consensus       227 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i  306 (371)
T PRK10767        227 IRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRL  306 (371)
T ss_pred             EEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEE
Confidence               221          111                                       1133689999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEe
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  352 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~  352 (499)
                      +|+|.+...++..|||||+|+|..|+.|++++.+|+.++
T Consensus       307 ~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        307 RGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             CCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            999998765667899999999999999999999887543

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.45  E-value=9.3e-15  Score=140.46  Aligned_cols=92  Identities=34%  Similarity=0.631  Sum_probs=77.0

Q ss_pred             eceeeeecccccccCCCCCCCCCCCCCCccccccccccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcch
Q 010831           36 HKNFAALTLSADSCPFGGSKLNSSNARSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGA  115 (499)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~  115 (499)
                      +..|++..+...+|.+.+              +.....+-..|+|+||||++.|+.+||+||||+||++||||+++++++
T Consensus         6 t~rw~Lvl~~Llp~l~vg--------------l~egLYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~   71 (329)
T KOG0722|consen    6 TERWCLVLILLLPSLFVG--------------LSEGLYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPES   71 (329)
T ss_pred             chHHHHHHHHHHHHHHHh--------------hhhhhcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchh
Confidence            345666665555555443              222355667899999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHHhhcchhhhhhhcccc
Q 010831          116 TEKFKEISAAYEVLSDDKKRAMYDQY  141 (499)
Q Consensus       116 ~~~f~~i~~AY~vLsd~~kR~~YD~~  141 (499)
                      .+.|+.|.+|||+|.|.+.|..||-+
T Consensus        72 k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   72 KKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             hhhhhhhhcccccccchhhHHhHHHH
Confidence            89999999999999999999999974

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=3.1e-13  Score=141.51  Aligned_cols=118  Identities=31%  Similarity=0.608  Sum_probs=89.4

Q ss_pred             eeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee---------
Q 010831          222 LETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR---------  283 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~---------  283 (499)
                      ...|+.|+|+|.....         ...+|+.|+|+|+++.            ..|..|+|.|.+....-.         
T Consensus       169 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  236 (369)
T PRK14282        169 YVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG------------EYCHECGGSGRIRRRVRTTVKIPAGVE  236 (369)
T ss_pred             CcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC------------CCCCCCCCceeEEEEEEEEEEeCCCCC
Confidence            4679999999965321         3568999999998753            679999999975432111         


Q ss_pred             -----eccCc----------eEE----------------------------------------EeeeeEEEEeCCCCCCC
Q 010831          284 -----KCSGE----------GRI----------------------------------------RLKKNIKVKVPPGVSTG  308 (499)
Q Consensus       284 -----~C~G~----------G~v----------------------------------------~~~k~l~V~IP~Gv~~G  308 (499)
                           .-.|+          |.+                                        ...++++|+||+|+++|
T Consensus       237 ~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g  316 (369)
T PRK14282        237 DGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPE  316 (369)
T ss_pred             CCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCC
Confidence                 11111          111                                        12356899999999999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEE
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  351 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~  351 (499)
                      ++|+|+|+|++...++.+|||||+|+|+.|+.|++++.+|+..
T Consensus       317 ~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        317 TVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             CEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            9999999999865556689999999999999999999988754

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.41  E-value=2.2e-13  Score=127.00  Aligned_cols=66  Identities=30%  Similarity=0.450  Sum_probs=57.1

Q ss_pred             CcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhcccc
Q 010831           76 SGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMYDQY  141 (499)
Q Consensus        76 ~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~YD~~  141 (499)
                      +.|||++|||++.  ++..+|+++||+|+++||||++..+.    +.+.+..||+||++|+||.+|+.|+.-
T Consensus         1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~   72 (166)
T PRK01356          1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL   72 (166)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            3689999999996  78999999999999999999986421    234578999999999999999999753

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=4.3e-13  Score=140.19  Aligned_cols=119  Identities=31%  Similarity=0.654  Sum_probs=91.3

Q ss_pred             eeeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee-------
Q 010831          221 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK-------  284 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~-------  284 (499)
                      ....|+.|+|+|.....         ...+|+.|+|+|++++            ..|+.|+|.|.+....-.+       
T Consensus       164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  231 (365)
T PRK14290        164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPE------------EKCPRCNGTGTVVVNEDISVKIPKGA  231 (365)
T ss_pred             CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEcc------------CCCCCCCCceeEEEeeEEEEEECCCC
Confidence            35689999999964221         2468999999998743            6899999999865431111       


Q ss_pred             -------ccCce--------EE---------------------------------------EeeeeEEEEeCCCCCCCCE
Q 010831          285 -------CSGEG--------RI---------------------------------------RLKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       285 -------C~G~G--------~v---------------------------------------~~~k~l~V~IP~Gv~~G~~  310 (499)
                             -.|+|        .+                                       ...++++|+||+|+++|++
T Consensus       232 ~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~  311 (365)
T PRK14290        232 TDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEV  311 (365)
T ss_pred             CCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcE
Confidence                   12221        11                                       1235689999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEE
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  351 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~  351 (499)
                      |+|+|+|++.+.+..+|||||+|+|..|+.|++++.+|+.+
T Consensus       312 iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~  352 (365)
T PRK14290        312 LKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIRE  352 (365)
T ss_pred             EEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999876666789999999999999999999988765

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.40  E-value=3.5e-13  Score=126.28  Aligned_cols=64  Identities=31%  Similarity=0.542  Sum_probs=56.7

Q ss_pred             cCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccc
Q 010831           77 GDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        77 ~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      .|||++|||++.  ++..+|+++||+|+++||||+.....      +.+.|..||+||++|+||.+|+.|+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            389999999995  78899999999999999999975421      45689999999999999999999984

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.37  E-value=1e-12  Score=137.38  Aligned_cols=118  Identities=31%  Similarity=0.604  Sum_probs=89.1

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee-------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR-------------  283 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~-------------  283 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            ..|..|.|.|.+....-.             
T Consensus       161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  228 (366)
T PRK14294        161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV------------SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSR  228 (366)
T ss_pred             cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC------------cCCCCCCCceEeecceeEEEecCCCCcCCcE
Confidence            467999999996431     13578999999998753            679999999986543111             


Q ss_pred             -eccCce----------EE---------------------------------------EeeeeEEEEeCCCCCCCCEEEE
Q 010831          284 -KCSGEG----------RI---------------------------------------RLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       284 -~C~G~G----------~v---------------------------------------~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                       ...|.|          .+                                       .....++|.||+|+++|++|+|
T Consensus       229 i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri  308 (366)
T PRK14294        229 LRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRF  308 (366)
T ss_pred             EEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEE
Confidence             112221          11                                       1224579999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEE
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  351 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~  351 (499)
                      +|+|++.+.++.+|||||+|+|..|+.|++++.+|+..
T Consensus       309 ~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  346 (366)
T PRK14294        309 KGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTE  346 (366)
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999876656789999999999999999998887754

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=1.4e-12  Score=136.79  Aligned_cols=119  Identities=34%  Similarity=0.618  Sum_probs=89.0

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            ..|+.|.|.|.+....-.+.       
T Consensus       158 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IppG~~  225 (377)
T PRK14298        158 PKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE------------SPCPVCSGTGKVRKTRKITVNVPAGAD  225 (377)
T ss_pred             CCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC------------CCCCCCCCccEEEEEEEEEecCCCCCC
Confidence            357999999996432         12578999999998653            57999999998654311111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|+||+|+++|+
T Consensus       226 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~  305 (377)
T PRK14298        226 SGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHS  305 (377)
T ss_pred             CCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCC
Confidence                   111          111                                       123348999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEe
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  352 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~  352 (499)
                      +++|+|+|.+...++..|||||+|+|..|+.|++++.+|+.++
T Consensus       306 ~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        306 VFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999998665566899999999999999999998877543

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=3.3e-12  Score=134.56  Aligned_cols=114  Identities=31%  Similarity=0.585  Sum_probs=83.0

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK------------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~------------  284 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            .+|..|.|.|.+....-.+            
T Consensus       183 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  250 (389)
T PRK14295        183 PRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD------------DPCLVCKGSGRAKSSRTMQVRIPAGVSDGQR  250 (389)
T ss_pred             CcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec------------cCCCCCCCCceEeeeeEEEEEeCCCCCCCCE
Confidence            467999999996421     23568999999998754            6799999999765421111            


Q ss_pred             --ccCc----------eEE----------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          285 --CSGE----------GRI----------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       285 --C~G~----------G~v----------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                        -.|+          |.+                                        ...++++|+||+|+++|++|+
T Consensus       251 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~ir  330 (389)
T PRK14295        251 IRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLR  330 (389)
T ss_pred             EEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEE
Confidence              1111          111                                        123479999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      |+|+|.+.. ++..|||||+|+|..+..+..+...|
T Consensus       331 i~G~G~p~~-~~~~GDL~i~~~v~~P~~Ls~~qk~~  365 (389)
T PRK14295        331 VRGKGAVRK-DGTRGDLLVTVEVAVPKDLSGKAREA  365 (389)
T ss_pred             ECCCCcCCC-CCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999864 45689999999999887665444443

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=1.6e-12  Score=135.96  Aligned_cols=117  Identities=24%  Similarity=0.531  Sum_probs=88.2

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-----------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-----------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-----------  285 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            .+|..|+|.|.+....-.++           
T Consensus       163 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  230 (365)
T PRK14285        163 PSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS------------NPCKSCKGKGSLKKKETIELKIPAGIDDNQQ  230 (365)
T ss_pred             CccCCCccCceeEEecCceeEEeeecCCCCCcccccC------------CCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence            467999999996421     23678999999998753            67999999997654311111           


Q ss_pred             ---cCc----------eEE----------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          286 ---SGE----------GRI----------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       286 ---~G~----------G~v----------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                         .|+          |.+                                        ...++|+|+||+|+++|++|+
T Consensus       231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir  310 (365)
T PRK14285        231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII  310 (365)
T ss_pred             EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence               111          211                                        123579999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEE
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  350 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~  350 (499)
                      |+|+|++.+.+...|||||+|+|+.|+.|++++..|+.
T Consensus       311 l~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~  348 (365)
T PRK14285        311 IKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLE  348 (365)
T ss_pred             ECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            99999987655557999999999999999988876654

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.33  E-value=1.9e-12  Score=121.30  Aligned_cols=65  Identities=28%  Similarity=0.405  Sum_probs=57.9

Q ss_pred             CcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccc
Q 010831           76 SGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        76 ~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      ..|||++|||++.  .+..+|+++||+|+++||||++....      +.+.|..||+||++|+||.+|+.|+.
T Consensus         3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            5689999999996  67899999999999999999986422      45689999999999999999999995

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.32  E-value=1.9e-12  Score=121.73  Aligned_cols=65  Identities=31%  Similarity=0.434  Sum_probs=56.3

Q ss_pred             CcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCC-cch-----HHHHHHHHHHHhhcchhhhhhhccc
Q 010831           76 SGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKE-PGA-----TEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        76 ~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~-~~~-----~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      ..|||++|||++.  ++..+|+++||+|++++|||++.. +..     .+.+..||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            3699999999995  689999999999999999999863 222     3446899999999999999999985

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.6e-12  Score=133.61  Aligned_cols=117  Identities=29%  Similarity=0.667  Sum_probs=87.3

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK------------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~------------  284 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|.|.|.+....-.+            
T Consensus       175 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  242 (391)
T PRK14284        175 IKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT------------DPCSVCRGQGRIKDKRSVHVHIPAGVDSGMR  242 (391)
T ss_pred             CeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC------------CcCCCCCCcceecceEEEEEEECCCCCCCCE
Confidence            467999999996421     13569999999998754            6799999999764321111            


Q ss_pred             --ccCce----------EE---------------------------------------Eee--eeEEEEeCCCCCCCCEE
Q 010831          285 --CSGEG----------RI---------------------------------------RLK--KNIKVKVPPGVSTGSIL  311 (499)
Q Consensus       285 --C~G~G----------~v---------------------------------------~~~--k~l~V~IP~Gv~~G~~I  311 (499)
                        -.|+|          .+                                       ...  +.++|+||+|+++|+++
T Consensus       243 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~  322 (391)
T PRK14284        243 LKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTIL  322 (391)
T ss_pred             EEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEE
Confidence              12211          11                                       122  67899999999999999


Q ss_pred             EEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEE
Q 010831          312 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  350 (499)
Q Consensus       312 rl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~  350 (499)
                      +|+|+|.+...++.+|||||+|+|..++.++.+..+|+.
T Consensus       323 ~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~  361 (391)
T PRK14284        323 KVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLR  361 (391)
T ss_pred             EECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Confidence            999999987655678999999999999888877766553

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.31  E-value=1.2e-12  Score=135.53  Aligned_cols=66  Identities=42%  Similarity=0.638  Sum_probs=64.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQY  141 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~  141 (499)
                      ..|.|.+|||+.++++++|||.|||+|...|||+|..+.|+|.|+.++.|||+|+|+++|..||.-
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            679999999999999999999999999999999999999999999999999999999999999974

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=3.3e-12  Score=133.90  Aligned_cols=115  Identities=26%  Similarity=0.560  Sum_probs=85.2

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-----------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-----------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-----------  285 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+....-.+.           
T Consensus       162 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  229 (372)
T PRK14300        162 VTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIK------------NPCKKCHGMGRYHKQRNLSVNIPAGVENGTR  229 (372)
T ss_pred             CccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeC------------CCCCCCCCceEEEeeEEEEEEECCCCCCCcE
Confidence            467999999997531     13568999999998754            67999999998743211111           


Q ss_pred             ---cCc----------eEE---------------------------------------E-eeeeEEEEeCCCCCCCCEEE
Q 010831          286 ---SGE----------GRI---------------------------------------R-LKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       286 ---~G~----------G~v---------------------------------------~-~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                         .|.          |.+                                       . ..+.|+|+||+|+++|++|+
T Consensus       230 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~ir  309 (372)
T PRK14300        230 IRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLR  309 (372)
T ss_pred             EEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEE
Confidence               111          111                                       1 13579999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      |+|+|++.+++..+|||||+|+|+.|..|+-+...|
T Consensus       310 i~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk~~  345 (372)
T PRK14300        310 LRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQREL  345 (372)
T ss_pred             ECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999876666789999999999998776554443

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.4e-12  Score=132.85  Aligned_cols=117  Identities=31%  Similarity=0.636  Sum_probs=87.0

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            ..|..|+|.|.+......+.       
T Consensus       155 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  222 (371)
T PRK14287        155 PETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIK------------QKCATCGGKGKVRKRKKINVKVPAGID  222 (371)
T ss_pred             CcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcccc------------ccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence            467999999996432         12568999999998754            67999999987643322211       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|+||+|+++|+
T Consensus       223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  302 (371)
T PRK14287        223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT  302 (371)
T ss_pred             CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence                   221          111                                       123458999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEE
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  350 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~  350 (499)
                      +++|+|+|.+...++..|||||+|+|..|+.++++...|+.
T Consensus       303 ~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~  343 (371)
T PRK14287        303 SFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMR  343 (371)
T ss_pred             EEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHH
Confidence            99999999987665668999999999999988877766553

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.3e-12  Score=133.01  Aligned_cols=117  Identities=29%  Similarity=0.564  Sum_probs=86.5

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK------------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~------------  284 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            ..|+.|+|.|.+....-.+            
T Consensus       161 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  228 (373)
T PRK14301        161 PETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT------------HPCPKCKGSGIVQQTRELKVRIPAGVDTGSR  228 (373)
T ss_pred             CcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC------------CCCCCCCCCceeccceEEEEEeCCCCcCCCE
Confidence            467999999996421     23678999999998754            6799999999864321111            


Q ss_pred             --ccCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCCEEEE
Q 010831          285 --CSGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGSILRV  313 (499)
Q Consensus       285 --C~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~~Irl  313 (499)
                        -.|+          |.+                                       .....++|+||+|+++|++++|
T Consensus       229 i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~ri  308 (373)
T PRK14301        229 LRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRL  308 (373)
T ss_pred             EEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEEE
Confidence              1111          211                                       1234489999999999999999


Q ss_pred             cccCCCCCCCCCCccEEEEEEEEeccccccCCcceEE
Q 010831          314 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  350 (499)
Q Consensus       314 ~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~  350 (499)
                      +|+|.+...++..|||||+|+|..|+.++.+..+|+.
T Consensus       309 ~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~  345 (373)
T PRK14301        309 RGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLR  345 (373)
T ss_pred             cCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            9999987666678999999999999888766655543

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.30  E-value=7.2e-12  Score=131.54  Aligned_cols=115  Identities=29%  Similarity=0.601  Sum_probs=84.2

Q ss_pred             eeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee--------
Q 010831          222 LETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK--------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~--------  284 (499)
                      ...|+.|+|+|.....         ...+|+.|+|+|.++.            .+|+.|.|.|.+....-.+        
T Consensus       156 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  223 (378)
T PRK14278        156 PVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIP------------DPCHECAGDGRVRARREITVKIPAGVG  223 (378)
T ss_pred             ceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeC------------CCCCCCCCceeEecceEEEEEECCCCC
Confidence            4679999999964221         2568999999998754            5799999999865431111        


Q ss_pred             ------ccCc----------eEE---------------------------------------Ee-eeeEEEEeCCCCCCC
Q 010831          285 ------CSGE----------GRI---------------------------------------RL-KKNIKVKVPPGVSTG  308 (499)
Q Consensus       285 ------C~G~----------G~v---------------------------------------~~-~k~l~V~IP~Gv~~G  308 (499)
                            -.|+          |.+                                       .. .+.++|.||+|+++|
T Consensus       224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g  303 (378)
T PRK14278        224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG  303 (378)
T ss_pred             CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence                  1111          111                                       12 567899999999999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      ++++|+|+|.+...++..|||||+|+|..+..+..+...|
T Consensus       304 ~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~  343 (378)
T PRK14278        304 SVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIEL  343 (378)
T ss_pred             cEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHH
Confidence            9999999999876556789999999999887665444433

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.28  E-value=3.7e-12  Score=110.93  Aligned_cols=51  Identities=27%  Similarity=0.429  Sum_probs=47.7

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcc
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLS  130 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLs  130 (499)
                      .++|+||||+++|+.+|||++||+|++++|||++   ++.+.|++|++|||+|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999985   45689999999999995

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.27  E-value=1.1e-11  Score=129.98  Aligned_cols=116  Identities=33%  Similarity=0.557  Sum_probs=84.8

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceee--------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC--------------  282 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C--------------  282 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            .+|..|+|.|.+....-              
T Consensus       167 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  234 (372)
T PRK14286        167 PTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS------------NPCKTCGGQGLQEKRRTINIKIPPGVETGSR  234 (372)
T ss_pred             CccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec------------ccCCCCCCCcEEecceEEEEEECCCCCCCCE
Confidence            367999999996421     23568999999998754            57999999998654211              


Q ss_pred             eeccCc----------eEE----------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          283 RKCSGE----------GRI----------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       283 ~~C~G~----------G~v----------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                      ....|+          |.+                                        ...+.++|+||+|+++|++++
T Consensus       235 i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~r  314 (372)
T PRK14286        235 LKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFR  314 (372)
T ss_pred             EEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEE
Confidence            111111          221                                        113468999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcceE
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  349 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~  349 (499)
                      |+|+|.+...++..|||||+|+|..++.++.+..+|+
T Consensus       315 i~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l  351 (372)
T PRK14286        315 LKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELI  351 (372)
T ss_pred             ECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence            9999998765556899999999999987766555443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.26  E-value=6.5e-12  Score=130.91  Aligned_cols=116  Identities=33%  Similarity=0.736  Sum_probs=85.5

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee---------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR---------  283 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~---------  283 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|++++            ..|+.|.|.|.+....-.         
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  227 (354)
T TIGR02349       160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK------------EPCSTCKGKGRVKERKTITVKIPAGVD  227 (354)
T ss_pred             CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC------------CCCCCCCCCcEecccceEEEEECCCCC
Confidence            467999999995321         12468999999998754            579999999976432111         


Q ss_pred             -----eccCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          284 -----KCSGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       284 -----~C~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                           .-.|+          |.+                                       ....+++|.||+|+++|+
T Consensus       228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~  307 (354)
T TIGR02349       228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT  307 (354)
T ss_pred             CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence                 11111          111                                       112368999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceE
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  349 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~  349 (499)
                      +++|+|+|++...+..+|||||+|+|..++.|++++.+++
T Consensus       308 ~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l  347 (354)
T TIGR02349       308 VFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELL  347 (354)
T ss_pred             EEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            9999999998766667899999999999998887776554

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=1e-11  Score=130.01  Aligned_cols=116  Identities=23%  Similarity=0.508  Sum_probs=85.2

Q ss_pred             eeeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec----------
Q 010831          221 HLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC----------  285 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C----------  285 (499)
                      ....|+.|+|+|....     ....+|+.|+|+|.++.            ..|..|+|.|.+....-.+.          
T Consensus       155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~  222 (369)
T PRK14288        155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK------------TPCQACKGKTYILKDEEIDAIIPEGIDDQN  222 (369)
T ss_pred             CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc------------ccCccCCCcceEEEEEEEEEecCCCCCCCC
Confidence            4578999999996421     23568999999998754            67999999998654321111          


Q ss_pred             ----cCc---------eEE----------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          286 ----SGE---------GRI----------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       286 ----~G~---------G~v----------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                          .|+         |.+                                        ...+.++|+||+|+++|++++
T Consensus       223 ~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~  302 (369)
T PRK14288        223 RMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA  302 (369)
T ss_pred             EEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence                111         111                                        123468999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      |+|+|.+.+.+...|||||+|+|+.|+.|+.+...+
T Consensus       303 i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~  338 (369)
T PRK14288        303 FRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQEL  338 (369)
T ss_pred             EcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999866544569999999999998877665443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=9.2e-12  Score=131.57  Aligned_cols=115  Identities=33%  Similarity=0.673  Sum_probs=84.1

Q ss_pred             eeeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee-------
Q 010831          221 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK-------  284 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~-------  284 (499)
                      ....|+.|+|+|.....         ...+|+.|+|+|+++.            ..|+.|.|.|.+....-.+       
T Consensus       178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  245 (397)
T PRK14281        178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVK------------DRCPACYGEGIKQGEVTVKVTVPAGV  245 (397)
T ss_pred             CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeC------------CCCCCCCCCccEecceEEEEecCCCC
Confidence            35689999999964221         2568999999998754            6799999999875431111       


Q ss_pred             -------ccCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCC
Q 010831          285 -------CSGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTG  308 (499)
Q Consensus       285 -------C~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G  308 (499)
                             ..|+          |.+                                       ..+..++|+||+|+++|
T Consensus       246 ~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G  325 (397)
T PRK14281        246 QDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPE  325 (397)
T ss_pred             CCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCC
Confidence                   1221          111                                       12345899999999999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcc
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGID  347 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~D  347 (499)
                      ++++|+|+|.+...++..|||||+|+|..+..++.+...
T Consensus       326 ~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~  364 (397)
T PRK14281        326 TMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKE  364 (397)
T ss_pred             cEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHH
Confidence            999999999987655678999999999988766544443

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=8e-12  Score=131.34  Aligned_cols=115  Identities=25%  Similarity=0.558  Sum_probs=82.7

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            .+|+.|.|.|.+....-.+.       
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (380)
T PRK14276        163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIK------------EPCQTCHGTGHEKQAHTVSVKIPAGVE  230 (380)
T ss_pred             CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcccc------------CCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence            457999999986421         12568999999998754            57999999987643311111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|+||+|+++|+
T Consensus       231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~  310 (380)
T PRK14276        231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK  310 (380)
T ss_pred             CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence                   111          211                                       123458999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      +++|+|+|.+...++.+|||||+|+|..+..+..+...+
T Consensus       311 ~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~  349 (380)
T PRK14276        311 KFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEA  349 (380)
T ss_pred             EEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999999876556789999999999887766554443

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.25  E-value=1.5e-11  Score=129.62  Aligned_cols=114  Identities=30%  Similarity=0.608  Sum_probs=83.0

Q ss_pred             eeeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee-----------
Q 010831          221 HLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK-----------  284 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~-----------  284 (499)
                      ....|+.|+|+|....     ....+|+.|+|+|+++.            ..|..|.|.|.+....-.+           
T Consensus       189 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  256 (392)
T PRK14279        189 SPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE------------DPCEECKGTGVTTRTRTINVRIPPGVEDGQ  256 (392)
T ss_pred             CCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC------------CcCCCCCCCeEEEEeeeeEEEeCCCCCCCc
Confidence            3468999999996522     13579999999998754            6799999999875431111           


Q ss_pred             ---ccCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          285 ---CSGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       285 ---C~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                         -.|+          |.+                                       .....++|+||+|+++|++|+
T Consensus       257 ~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~g~~~g~~ir  336 (392)
T PRK14279        257 RIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILR  336 (392)
T ss_pred             EEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEECCCCCCCCEEE
Confidence               1111          211                                       123458999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEeccccccCCcc
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGID  347 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~D  347 (499)
                      |+|+|++.. ++..|||||+|+|..++.+..+...
T Consensus       337 i~g~G~p~~-~~~~GDL~I~~~v~~P~~Ls~~q~~  370 (392)
T PRK14279        337 VRGRGVPKR-SGGAGDLLVTVKVAVPPNLDGAAAE  370 (392)
T ss_pred             ECCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHH
Confidence            999999863 4568999999999988766544443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=2e-11  Score=128.16  Aligned_cols=115  Identities=34%  Similarity=0.651  Sum_probs=82.3

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            .+|+.|+|.|.+....-...       
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~i~V~Ip~G~~  227 (376)
T PRK14280        160 KETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK------------EKCPTCHGKGKVRKRKKINVKIPAGVD  227 (376)
T ss_pred             CccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec------------CCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence            467999999996421         13568999999998753            67999999997643211111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|+||+|+++|+
T Consensus       228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~  307 (376)
T PRK14280        228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT  307 (376)
T ss_pred             CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence                   111          111                                       123458999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      +++|+|+|.+...+...|||||+|+|..+..++.+...|
T Consensus       308 ~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q~~~  346 (376)
T PRK14280        308 QFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKEL  346 (376)
T ss_pred             EEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            999999999866555689999999999887665444433

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=1.4e-11  Score=129.30  Aligned_cols=118  Identities=26%  Similarity=0.548  Sum_probs=87.4

Q ss_pred             eeecccccCccccc-------C--cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee--------
Q 010831          222 LETCEVCTGTGAKM-------G--SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK--------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~-------g--~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~--------  284 (499)
                      ...|+.|+|+|...       +  ....+|+.|+|+|+++.            ..|..|.|.|.+....-.+        
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~IppG~~  227 (374)
T PRK14293        160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIE------------DPCDACGGQGVKQVTKKLKINIPAGVD  227 (374)
T ss_pred             CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEec------------cCCCCCCCCcccccceEEEEEeCCCCC
Confidence            46799999999642       1  12468999999998754            5799999999764321111        


Q ss_pred             ------ccC----------ceEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          285 ------CSG----------EGRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       285 ------C~G----------~G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                            -.|          .|.+                                       .....++|+||+|+++|+
T Consensus       228 ~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~  307 (374)
T PRK14293        228 TGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNT  307 (374)
T ss_pred             CCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCC
Confidence                  111          1211                                       113347899999999999


Q ss_pred             EEEEcccCCCCCCC-CCCccEEEEEEEEeccccccCCcceEEE
Q 010831          310 ILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDGIDLFST  351 (499)
Q Consensus       310 ~Irl~G~G~~~~~g-g~~GDL~V~i~v~~h~~f~R~G~DL~~~  351 (499)
                      +++|+|+|.+...+ +..|||||+|+|..|+.+++++.+|+..
T Consensus       308 ~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~  350 (374)
T PRK14293        308 VLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEK  350 (374)
T ss_pred             EEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999986543 3579999999999999999998887654

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=2e-11  Score=128.59  Aligned_cols=114  Identities=31%  Similarity=0.609  Sum_probs=83.5

Q ss_pred             eeeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee--------
Q 010831          221 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR--------  283 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~--------  283 (499)
                      ....|+.|+|+|.....         ...+|+.|+|+|+++.            ..|..|+|.|.+....-.        
T Consensus       170 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  237 (386)
T PRK14289        170 GSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIK------------KKCKKCGGEGIVYGEEVITVKIPAGV  237 (386)
T ss_pred             CCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccC------------cCCCCCCCCcEEeeeEEEEEEeCCCC
Confidence            45789999999975322         2568999999998753            579999999986543111        


Q ss_pred             ------eccCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCC
Q 010831          284 ------KCSGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTG  308 (499)
Q Consensus       284 ------~C~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G  308 (499)
                            .-.|+          |.+                                       .....++|.||+|+++|
T Consensus       238 ~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g  317 (386)
T PRK14289        238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPG  317 (386)
T ss_pred             CCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCC
Confidence                  11111          211                                       12345899999999999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCc
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGI  346 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~  346 (499)
                      ++++|+|+|.+.+.++..|||||+|+|+-+..+..+..
T Consensus       318 ~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~  355 (386)
T PRK14289        318 KVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEK  355 (386)
T ss_pred             cEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHH
Confidence            99999999998766667899999999998866554433

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.22  E-value=2.6e-11  Score=127.49  Aligned_cols=114  Identities=28%  Similarity=0.584  Sum_probs=82.4

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            ..|..|+|.|.+....-...       
T Consensus       165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~i~V~Ip~G~~  232 (380)
T PRK14297        165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIE------------DPCNKCHGKGKVRKNRKIKVNVPAGVD  232 (380)
T ss_pred             CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcC------------CCCCCCCCCeEEEeEeEEEEEeCCCCC
Confidence            467999999996521         23678999999998753            67999999996533211111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|+||+|+++|+
T Consensus       233 ~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~  312 (380)
T PRK14297        233 TGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGT  312 (380)
T ss_pred             CCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCC
Confidence                   111          111                                       123458999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcc
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGID  347 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~D  347 (499)
                      +++|+|+|.+...++..|||||+|+|..+..+..+...
T Consensus       313 ~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~  350 (380)
T PRK14297        313 VFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKE  350 (380)
T ss_pred             EEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHHHH
Confidence            99999999986666678999999999988766544443

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.21  E-value=3.3e-11  Score=126.98  Aligned_cols=115  Identities=32%  Similarity=0.625  Sum_probs=83.1

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|.++.            ..|..|+|.|.+....-.+.       
T Consensus       172 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  239 (386)
T PRK14277        172 PVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIIT------------DPCNKCGGTGRIRRRRKIKVNIPAGID  239 (386)
T ss_pred             CccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeecc------------CCCCCCCCCcEEeeeeEEEEecCCCcc
Confidence            467999999996421         12468999999998754            67999999998644322111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       ..+..++|.||+|+++|+
T Consensus       240 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~  319 (386)
T PRK14277        240 DGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGT  319 (386)
T ss_pred             CCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCC
Confidence                   221          111                                       112347999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      +++|+|+|.+...+...|||||+|+|..+..++.+..++
T Consensus       320 ~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk~~  358 (386)
T PRK14277        320 KFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKEL  358 (386)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHH
Confidence            999999999866555679999999999887665544443

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.20  E-value=1.1e-11  Score=124.08  Aligned_cols=57  Identities=46%  Similarity=0.609  Sum_probs=51.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHhhcchh
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--------PGATEKFKEISAAYEVLSDD  132 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--------~~~~~~f~~i~~AY~vLsd~  132 (499)
                      -.|+|+||||++++|.+|||+|||+|+++||||++..        +.++++|++|++||++|+..
T Consensus       199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999642        24779999999999999863

>PHA02624 large T antigen; Provisional

Probab=99.19  E-value=1.5e-11  Score=133.37  Aligned_cols=60  Identities=32%  Similarity=0.538  Sum_probs=56.4

Q ss_pred             CcCcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhc
Q 010831           76 SGDYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY  138 (499)
Q Consensus        76 ~~d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~Y  138 (499)
                      ..++|++|||+++|  +.+|||+|||++|++||||++   +++++|++|++||++|+|+.+|..|
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhc
Confidence            35899999999999  999999999999999999997   4578999999999999999999999

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.19  E-value=5.2e-11  Score=124.82  Aligned_cols=115  Identities=22%  Similarity=0.535  Sum_probs=81.6

Q ss_pred             eeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeee--------
Q 010831          222 LETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK--------  284 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~--------  284 (499)
                      ...|+.|+|+|.....         ...+|+.|+|+|.+++            ..|+.|+|.|.+....-.+        
T Consensus       166 ~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  233 (372)
T PRK14296        166 IHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK------------NKCKNCKGKGKYLERKKIEVNIPKGIR  233 (372)
T ss_pred             CccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec------------ccccCCCCceEEEEEEEEEEEECCCCC
Confidence            4679999999975322         2468999999998764            6799999999754321111        


Q ss_pred             ------ccCc----------eEE----------------------------------------EeeeeEEEEeCCCCCCC
Q 010831          285 ------CSGE----------GRI----------------------------------------RLKKNIKVKVPPGVSTG  308 (499)
Q Consensus       285 ------C~G~----------G~v----------------------------------------~~~k~l~V~IP~Gv~~G  308 (499)
                            -.|+          |.+                                        ..+..++|+||+|+++|
T Consensus       234 ~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~~g  313 (372)
T PRK14296        234 PNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSN  313 (372)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccCCC
Confidence                  1111          111                                        12334899999999999


Q ss_pred             CEEEEcccCCCCC-CCCCCccEEEEEEEEeccccccCCcce
Q 010831          309 SILRVVGEGDAGP-RGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       309 ~~Irl~G~G~~~~-~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      ++++|+|+|.+.. .++..|||||+|+|.-+..+..+...|
T Consensus       314 ~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~  354 (372)
T PRK14296        314 ELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKEL  354 (372)
T ss_pred             cEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHH
Confidence            9999999999733 234579999999999887666544443

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.18  E-value=3.3e-11  Score=126.63  Aligned_cols=115  Identities=29%  Similarity=0.609  Sum_probs=83.1

Q ss_pred             eeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec-------
Q 010831          222 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC-------  285 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C-------  285 (499)
                      ...|+.|+|+|....         ....+|+.|+|+|..+.            .+|..|+|.|.+....-.++       
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IppG~~  230 (378)
T PRK14283        163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVE------------KPCSNCHGKGVVRETKTISVKIPAGVE  230 (378)
T ss_pred             CccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecC------------CCCCCCCCceeeccceeEEEEECCCCC
Confidence            457999999997531         12578999999998753            67999999997644311111       


Q ss_pred             -------cCc----------eEE---------------------------------------EeeeeEEEEeCCCCCCCC
Q 010831          286 -------SGE----------GRI---------------------------------------RLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       286 -------~G~----------G~v---------------------------------------~~~k~l~V~IP~Gv~~G~  309 (499)
                             .|+          |.+                                       .....++|.||+|+++|+
T Consensus       231 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~  310 (378)
T PRK14283        231 TGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGT  310 (378)
T ss_pred             CCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCC
Confidence                   111          111                                       123368999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      +|+|+|+|.+...+...|||||+|+|..++.++.+...|
T Consensus       311 ~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~l  349 (378)
T PRK14283        311 TFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKEL  349 (378)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHH
Confidence            999999999866555789999999999887665544443

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.17  E-value=3.3e-11  Score=126.43  Aligned_cols=117  Identities=27%  Similarity=0.593  Sum_probs=85.6

Q ss_pred             eeeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEce-----------
Q 010831          221 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISE-----------  280 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~-----------  280 (499)
                      ....|..|+|+|.....         ...+|+.|+|.|+++.            .+|..|.|.|.+...           
T Consensus       156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  223 (371)
T PRK14292        156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIIT------------DPCTVCRGRGRTLKAETVKVKLPRGI  223 (371)
T ss_pred             CCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecC------------CCCCCCCCceEEeecceEEEEECCCC
Confidence            35679999999965422         1468999999998643            679999999876432           


Q ss_pred             ---eeeeccCce--------EE------------------------------------E---eeeeEEEEeCCCCCCCCE
Q 010831          281 ---YCRKCSGEG--------RI------------------------------------R---LKKNIKVKVPPGVSTGSI  310 (499)
Q Consensus       281 ---~C~~C~G~G--------~v------------------------------------~---~~k~l~V~IP~Gv~~G~~  310 (499)
                         .-....|+|        .+                                    .   ....++|.||+|+++|++
T Consensus       224 ~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~  303 (371)
T PRK14292        224 DEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDL  303 (371)
T ss_pred             CCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcE
Confidence               111223332        11                                    1   123457999999999999


Q ss_pred             EEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceE
Q 010831          311 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  349 (499)
Q Consensus       311 Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~  349 (499)
                      ++|+|+|++...+..+|||||+|+|+.|+.|+.+...|+
T Consensus       304 ~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll  342 (371)
T PRK14292        304 HRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREAL  342 (371)
T ss_pred             EEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            999999998766667899999999999988876665544

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.14  E-value=2.1e-10  Score=120.78  Aligned_cols=105  Identities=34%  Similarity=0.675  Sum_probs=77.6

Q ss_pred             eeecccccCcccccC-----cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee-------------
Q 010831          222 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR-------------  283 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~-------------  283 (499)
                      ...|+.|+|+|....     ....+|+.|+|+|. ++            ..|..|+|.|.+....-.             
T Consensus       173 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  239 (382)
T PRK14291        173 EKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LR------------EPCSKCNGRGLVIKKETIKVRIPPGVDNGSK  239 (382)
T ss_pred             CccCCCCCCceEEEEecceEEEEecCCCCCCceE-Ec------------cCCCCCCCCceEEeeeEEEEEeCCCCCCCCE
Confidence            567999999996421     23578999999994 22            579999999976432111             


Q ss_pred             -eccCceE----------E----------------------------------------EeeeeEEEEeCCCCCCCCEEE
Q 010831          284 -KCSGEGR----------I----------------------------------------RLKKNIKVKVPPGVSTGSILR  312 (499)
Q Consensus       284 -~C~G~G~----------v----------------------------------------~~~k~l~V~IP~Gv~~G~~Ir  312 (499)
                       ...|+|.          +                                        ...+.++|+||+|+++|++|+
T Consensus       240 i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~  319 (382)
T PRK14291        240 LRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIR  319 (382)
T ss_pred             EEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEE
Confidence             1122221          0                                        123468999999999999999


Q ss_pred             EcccCCCCCCCCCCccEEEEEEEEecc
Q 010831          313 VVGEGDAGPRGGPPGDLYVYLDVEEIP  339 (499)
Q Consensus       313 l~G~G~~~~~gg~~GDL~V~i~v~~h~  339 (499)
                      |+|+|++...+..+|||||+|+|..+.
T Consensus       320 i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        320 VPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             ECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            999999876556789999999999885

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.12  E-value=1e-10  Score=124.14  Aligned_cols=115  Identities=24%  Similarity=0.534  Sum_probs=81.9

Q ss_pred             eeeecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee--------
Q 010831          221 HLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR--------  283 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~--------  283 (499)
                      ....|+.|+|+|....         ....+|+.|+|+|.++...          .+|..|+|.|.+....-.        
T Consensus       165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~----------~~C~~C~G~g~v~~~~~l~V~Ip~G~  234 (421)
T PTZ00037        165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPES----------KKCKNCSGKGVKKTRKILEVNIDKGV  234 (421)
T ss_pred             CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecccc----------ccCCcCCCcceeeeeeEEEEeeCCCC
Confidence            3467999999996321         1256899999999876422          579999999986543111        


Q ss_pred             ------eccCceE---------E----------------------------------------EeeeeEEEEeCCC--CC
Q 010831          284 ------KCSGEGR---------I----------------------------------------RLKKNIKVKVPPG--VS  306 (499)
Q Consensus       284 ------~C~G~G~---------v----------------------------------------~~~k~l~V~IP~G--v~  306 (499)
                            .-.|+|.         +                                        ...+.|+|+||+|  ++
T Consensus       235 ~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~  314 (421)
T PTZ00037        235 PNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVK  314 (421)
T ss_pred             CCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccC
Confidence                  1122221         1                                        2245689999999  99


Q ss_pred             CCCEEEEcccCCCCCCC-CCCccEEEEEEEEec--cccccCC
Q 010831          307 TGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEI--PGIQRDG  345 (499)
Q Consensus       307 ~G~~Irl~G~G~~~~~g-g~~GDL~V~i~v~~h--~~f~R~G  345 (499)
                      +|++++|+|+|.+...+ +..|||||+|+|..+  ..++.+.
T Consensus       315 pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~q  356 (421)
T PTZ00037        315 PGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEE  356 (421)
T ss_pred             CCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHH
Confidence            99999999999985443 457999999999988  6555443

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.06  E-value=9.9e-11  Score=120.73  Aligned_cols=73  Identities=36%  Similarity=0.614  Sum_probs=66.2

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE------PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~------~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      ..|+|||||++.+++..|||++||+|..|||||+.+.      .+.+|++++|+.||+.|+|...|+.|=.||.....+
T Consensus        97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~pQ  175 (610)
T COG5407          97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSPQ  175 (610)
T ss_pred             CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCCc
Confidence            4599999999999999999999999999999999764      356899999999999999999999999999876553

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.95  E-value=1.1e-09  Score=102.72  Aligned_cols=64  Identities=23%  Similarity=0.317  Sum_probs=55.7

Q ss_pred             CcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhcc
Q 010831           76 SGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYD  139 (499)
Q Consensus        76 ~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD  139 (499)
                      +.|||++|||++.  .+..+++++||+|.+++|||+.....      +.+.-..||+||.+|+||.+|+.|=
T Consensus         1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL   72 (173)
T PRK01773          1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI   72 (173)
T ss_pred             CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence            4699999999996  89999999999999999999975432      3345678999999999999999983

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.88  E-value=2.3e-09  Score=99.27  Aligned_cols=53  Identities=30%  Similarity=0.448  Sum_probs=46.2

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHhhcchhhhhhhcccc
Q 010831           89 ASGKEIKAAYRKLARQYHPDVNKEP------GATEKFKEISAAYEVLSDDKKRAMYDQY  141 (499)
Q Consensus        89 as~~eIk~ayrkla~~~HPD~~~~~------~~~~~f~~i~~AY~vLsd~~kR~~YD~~  141 (499)
                      .+..+|+++||+|+++||||+....      .+.+.|..||+||++|+||.+|+.|+.-
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~   61 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS   61 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence            4778999999999999999986432      1567899999999999999999999864

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.86  E-value=7.3e-09  Score=105.26  Aligned_cols=72  Identities=29%  Similarity=0.442  Sum_probs=64.2

Q ss_pred             cccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCC
Q 010831          341 IQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI  419 (499)
Q Consensus       341 f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~L  419 (499)
                      +.|+|.||++++.|+|.||++|+++.| +++|. ++|+||+|+++|++++++|+|++.       |||||+|+|.-+..+
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f  196 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF  196 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence            457899999999999999999999998 78884 799999999999999999999873       999999999876654


Q ss_pred             C
Q 010831          420 S  420 (499)
Q Consensus       420 s  420 (499)
                      .
T Consensus       197 ~  197 (291)
T PRK14299        197 R  197 (291)
T ss_pred             E
Confidence            3

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.76  E-value=1.3e-08  Score=88.22  Aligned_cols=61  Identities=36%  Similarity=0.743  Sum_probs=50.0

Q ss_pred             ceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEE
Q 010831          220 SHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  292 (499)
Q Consensus       220 ~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~  292 (499)
                      ...+.|..|+|+|..      +|+.|+|+|.++...   .+.+++..+|+.|+|.|++   +|..|+|.|++.
T Consensus        39 ~~~v~C~~C~GsG~~------~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~   99 (111)
T PLN03165         39 ENTQPCFPCSGTGAQ------VCRFCVGSGNVTVEL---GGGEKEVSKCINCDGAGSL---TCTTCQGSGIQP   99 (111)
T ss_pred             ccCCCCCCCCCCCCc------CCCCCcCcCeEEEEe---CCcEEEEEECCCCCCccee---eCCCCCCCEEEe
Confidence            345789999999973      899999999987543   2346667899999999985   499999999864

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.75  E-value=8.6e-09  Score=84.85  Aligned_cols=49  Identities=43%  Similarity=0.758  Sum_probs=38.4

Q ss_pred             eeEEEEeCCCCCCCCEEEEcccCCCCCCCC-CCccEEEEEEEEecccccc
Q 010831          295 KNIKVKVPPGVSTGSILRVVGEGDAGPRGG-PPGDLYVYLDVEEIPGIQR  343 (499)
Q Consensus       295 k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg-~~GDL~V~i~v~~h~~f~R  343 (499)
                      ++++|.||+|+++|++++++|+|.+...+. ..|||||+|+|.-+..++.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~   76 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSP   76 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSH
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCH
Confidence            478899999999999999999999765554 7999999999998876653

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.70  E-value=1.1e-08  Score=99.62  Aligned_cols=73  Identities=38%  Similarity=0.446  Sum_probs=63.6

Q ss_pred             cccccccCcCcchhcCCCC---CCCHHHHHHHHHHHHHHhCCCCCC---CcchHHHHHHHHHHHhhcchhhhhhhcccc
Q 010831           69 GRSVVCASGDYYATLGVPK---SASGKEIKAAYRKLARQYHPDVNK---EPGATEKFKEISAAYEVLSDDKKRAMYDQY  141 (499)
Q Consensus        69 ~~~~~~~~~d~Y~vLgv~~---~as~~eIk~ayrkla~~~HPD~~~---~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~  141 (499)
                      |...-+...|+|.+|||+.   .|++.+|.+|.++.+.+||||+..   +.+..+.|+.|+.||+||+|+.+|.+||.-
T Consensus        35 ~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~  113 (379)
T COG5269          35 EDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN  113 (379)
T ss_pred             hhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence            4445566789999999987   688999999999999999999863   346778999999999999999999999974

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.66  E-value=7.4e-08  Score=98.61  Aligned_cols=74  Identities=18%  Similarity=0.370  Sum_probs=61.6

Q ss_pred             cCCcceEEEeeeCHHhhhCCCEEEE----eccC--C--------eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEE
Q 010831          343 RDGIDLFSTISISYLDAIMGTVVKV----KTVE--G--------ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL  408 (499)
Q Consensus       343 R~G~DL~~~~~Isl~eAllG~~~~I----~tld--G--------~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~  408 (499)
                      +.|.||++++.|+|.||+.|+..+|    ++++  |        .++|+||+|+++|++++++|+|+|..++ ..+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence            4688999999999999999996554    4444  3        3588899999999999999999997543 4689999


Q ss_pred             EEEEEEcCCC
Q 010831          409 FTVKVTIPNR  418 (499)
Q Consensus       409 V~~~V~~P~~  418 (499)
                      |+|+|. |..
T Consensus       194 v~i~v~-ph~  202 (306)
T PRK10266        194 LVIHIA-PHP  202 (306)
T ss_pred             EEEEEc-CCC
Confidence            999999 654

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.61  E-value=3.4e-08  Score=92.51  Aligned_cols=63  Identities=30%  Similarity=0.481  Sum_probs=57.3

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhh
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAM  137 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~  137 (499)
                      -+-|+|+||.|.+..+.++||+.||+|+...|||+|++  +.|...|.-|..||..|-|+..|..
T Consensus        51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr  115 (250)
T KOG1150|consen   51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR  115 (250)
T ss_pred             cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            36789999999999999999999999999999999996  5688899999999999999986543

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.35  E-value=6.9e-07  Score=91.36  Aligned_cols=46  Identities=35%  Similarity=0.480  Sum_probs=40.9

Q ss_pred             eeeeEEEEeCCC--CCCCCEEEEcccCCCCCCCCCCccEEEEEEEEecc
Q 010831          293 LKKNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  339 (499)
Q Consensus       293 ~~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~  339 (499)
                      ..+.|++.++||  +.+|+++++.|+|++-.+.. .|||||.++|+.++
T Consensus       277 dGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  277 DGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK  324 (337)
T ss_pred             CCceEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence            357789999999  89999999999999976554 99999999999887

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.24  E-value=1.1e-06  Score=84.06  Aligned_cols=55  Identities=33%  Similarity=0.655  Sum_probs=51.3

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHh-hcchh
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYE-VLSDD  132 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~-vLsd~  132 (499)
                      .||.+|||...|+.+|++.||.+||+++|||...+....++|.+|.+||. ||+..
T Consensus        48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~  103 (342)
T KOG0568|consen   48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEK  103 (342)
T ss_pred             HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999887778899999999998 88753

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.23  E-value=8.6e-07  Score=83.84  Aligned_cols=49  Identities=31%  Similarity=0.642  Sum_probs=44.9

Q ss_pred             eeeCCCCCCCCEEEc--eeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEc
Q 010831          265 VSVCPSCGGEGEVIS--EYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV  314 (499)
Q Consensus       265 ~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~  314 (499)
                      ..+|+.|+|+|++|.  ++|++|+|.|+++.+.++.+++ .|+.+|++|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            478999999999987  7899999999999999999999 999999999874

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.16  E-value=2e-06  Score=96.57  Aligned_cols=54  Identities=35%  Similarity=0.508  Sum_probs=46.3

Q ss_pred             CcCcchhcCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcch
Q 010831           76 SGDYYATLGVPKS----ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSD  131 (499)
Q Consensus        76 ~~d~Y~vLgv~~~----as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd  131 (499)
                      ..+-|+||.|+-+    -..+.||++|+|||.+||||+||  +-.++|..||+|||.|+.
T Consensus      1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP--EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP--EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred             hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHH
Confidence            3578999999763    23478999999999999999994  678999999999999983

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.73  E-value=4.7e-05  Score=64.83  Aligned_cols=52  Identities=29%  Similarity=0.365  Sum_probs=45.2

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchh
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD  132 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~  132 (499)
                      .--.||||+++++.+.||+|+||+....|||+...|   ..-.+||||+++|...
T Consensus        57 EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   57 EAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhcc
Confidence            456799999999999999999999999999998544   5566899999999753

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.66  E-value=2.7e-05  Score=83.55  Aligned_cols=68  Identities=31%  Similarity=0.736  Sum_probs=45.0

Q ss_pred             eecccccCcccccCcceeeccCCCCcceEEEEee--------CCccceee-eeeCCCCCCCCEEE-ceeeeeccCceEE
Q 010831          223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ--------TPFGLFSQ-VSVCPSCGGEGEVI-SEYCRKCSGEGRI  291 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~--------~~~g~~~~-~~~C~~C~G~G~~i-~~~C~~C~G~G~v  291 (499)
                      ..|+.|+|+|...- ....|+.|+|+|.+-....        -..-.|.. ..+|+.|.|+|++- -+.|..|.|.|.+
T Consensus         3 ~~C~~C~g~G~i~v-~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv   80 (715)
T COG1107           3 KKCPECGGKGKIVV-GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKV   80 (715)
T ss_pred             ccccccCCCceEee-eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeE
Confidence            46888988886543 3467999999887622110        00112223 35888888888875 4788888888876

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.50  E-value=5.8e-05  Score=59.71  Aligned_cols=44  Identities=32%  Similarity=0.881  Sum_probs=30.8

Q ss_pred             eeeecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCC
Q 010831          221 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  275 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G  275 (499)
                      ....|+.|+|+|.....         ...+|+.|+|+|+++ .          ..+|+.|+|.|
T Consensus        14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~----------~~~C~~C~G~g   66 (66)
T PF00684_consen   14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-E----------KDPCKTCKGSG   66 (66)
T ss_dssp             T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--T----------SSB-SSSTTSS
T ss_pred             CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-C----------CCCCCCCCCcC
Confidence            34589999999976432         267899999999886 1          17899999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.49  E-value=0.00035  Score=77.93  Aligned_cols=71  Identities=55%  Similarity=0.918  Sum_probs=67.2

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .|||+||||+++|+.++||+|||+||++||||+++.+.+.++|++|++||++|+||.+|+.||+||..+..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            58999999999999999999999999999999998878889999999999999999999999999987654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.09  E-value=0.00048  Score=69.20  Aligned_cols=31  Identities=35%  Similarity=0.761  Sum_probs=19.4

Q ss_pred             eCCCCCCCCEEEceeeeeccCceEEEeeeeEEEE
Q 010831          267 VCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVK  300 (499)
Q Consensus       267 ~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~  300 (499)
                      .|++|.|.|.   .+|.+|.|.|-+..-..+.|.
T Consensus       247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence            4666666654   578888888876544444443

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=96.79  E-value=0.0013  Score=59.87  Aligned_cols=65  Identities=25%  Similarity=0.465  Sum_probs=52.0

Q ss_pred             cCcCcchhcCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHhhcchhhhhhhcc
Q 010831           75 ASGDYYATLGVPK--SASGKEIKAAYRKLARQYHPDVNKE------PGATEKFKEISAAYEVLSDDKKRAMYD  139 (499)
Q Consensus        75 ~~~d~Y~vLgv~~--~as~~eIk~ayrkla~~~HPD~~~~------~~~~~~f~~i~~AY~vLsd~~kR~~YD  139 (499)
                      ...+||.++|...  ...+.-++.-|--..++.|||+...      .-+.+.-.++|+||.+|.||-+|+.|=
T Consensus         6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi   78 (168)
T KOG3192|consen    6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL   78 (168)
T ss_pred             hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            3568999998544  5566667768999999999998431      236678899999999999999999994

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.46  E-value=0.0021  Score=69.45  Aligned_cols=45  Identities=33%  Similarity=0.886  Sum_probs=35.9

Q ss_pred             eeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc---------------------eeeeeccCceEEEe
Q 010831          239 MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS---------------------EYCRKCSGEGRIRL  293 (499)
Q Consensus       239 ~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~---------------------~~C~~C~G~G~v~~  293 (499)
                      ..+|+.|+|+|++...          ...|+.|+|+|++-.                     -+|..|+|.|.|..
T Consensus         2 ~~~C~~C~g~G~i~v~----------~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v   67 (715)
T COG1107           2 IKKCPECGGKGKIVVG----------EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV   67 (715)
T ss_pred             CccccccCCCceEeee----------eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE
Confidence            3689999999987543          368999999998521                     19999999998853

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.36  E-value=0.0027  Score=55.36  Aligned_cols=40  Identities=30%  Similarity=0.829  Sum_probs=31.1

Q ss_pred             ecccccCcccccC------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEE
Q 010831          224 TCEVCTGTGAKMG------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  278 (499)
Q Consensus       224 ~C~~C~GsG~~~g------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i  278 (499)
                      .|+.|+|+|....      ....+|+.|+|+|++               .|+.|.|.|.+.
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---------------~C~~C~G~G~~~   99 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---------------TCTTCQGSGIQP   99 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---------------eCCCCCCCEEEe
Confidence            7999999987532      125689999999952               499999999864

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.92  E-value=0.0044  Score=58.41  Aligned_cols=53  Identities=42%  Similarity=0.552  Sum_probs=46.0

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHhhc
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--------PGATEKFKEISAAYEVL  129 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--------~~~~~~f~~i~~AY~vL  129 (499)
                      .|.|.+|++...+...+|+++|+++...+|||+-..        ..+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999997432        24678899999999853

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=95.85  E-value=0.0056  Score=58.15  Aligned_cols=29  Identities=31%  Similarity=0.807  Sum_probs=14.6

Q ss_pred             eeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEE
Q 010831          240 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  278 (499)
Q Consensus       240 ~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i  278 (499)
                      .+|+.|+|+|.+++..          .+|+.|+|+|++.
T Consensus       100 ~~C~~C~G~G~~i~~~----------~~C~~C~G~G~v~  128 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQ----------RECDTCAGTGRFR  128 (186)
T ss_pred             CcCCCCCCeeEEecCC----------CCCCCCCCccEEe
Confidence            3455555555544311          3466666666543

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.38  E-value=0.01  Score=55.99  Aligned_cols=63  Identities=33%  Similarity=0.536  Sum_probs=49.1

Q ss_pred             CcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccc
Q 010831           78 DYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        78 d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      ||+..+|..+.+  ..+.++..|+.+++.||||+.....      +.+.+..++.||.+|.||.+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            456666666644  3456899999999999999986432      23578899999999999999999853

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=93.90  E-value=0.028  Score=56.87  Aligned_cols=59  Identities=25%  Similarity=0.599  Sum_probs=43.0

Q ss_pred             eeecccccCcccc--cCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEE
Q 010831          222 LETCEVCTGTGAK--MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  292 (499)
Q Consensus       222 ~~~C~~C~GsG~~--~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~  292 (499)
                      ...|+.|+|+|..  .-..+..|++|-|-  +.+       ..-+...|..|+|+|.   .+|.+|.|.|...
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~--~~~-------k~gt~~~C~~C~G~G~---~~C~tC~grG~k~  258 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGV--PPP-------KIGTHDLCYMCHGRGI---KECHTCKGRGKKP  258 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccCC--CCC-------CCCccchhhhccCCCc---ccCCcccCCCCcc
Confidence            5789999999953  12247889999881  111       1223478999999997   6899999999864

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=93.34  E-value=0.09  Score=56.85  Aligned_cols=28  Identities=29%  Similarity=0.396  Sum_probs=24.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCc
Q 010831           86 PKSASGKEIKAAYRKLARQYHPDVNKEP  113 (499)
Q Consensus        86 ~~~as~~eIk~ayrkla~~~HPD~~~~~  113 (499)
                      ..=.+.+++||||||..+..||||.+..
T Consensus       397 tDLVtp~~VKKaYrKA~L~VHPDKlqq~  424 (453)
T KOG0431|consen  397 TDLVTPAQVKKAYRKAVLCVHPDKLQQK  424 (453)
T ss_pred             hhccCHHHHHHHHHhhhheeCcccccCC
Confidence            3346899999999999999999998754

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=92.73  E-value=0.23  Score=44.43  Aligned_cols=55  Identities=24%  Similarity=0.288  Sum_probs=42.0

Q ss_pred             CcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhh
Q 010831           78 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR  135 (499)
Q Consensus        78 d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR  135 (499)
                      .-..||||++.++.++|.+.|.+|-...+|++.   ++...=.+|..|.|.|..+.+.
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~El~~  113 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQELKE  113 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999986   5666667899999999876544

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=90.03  E-value=0.45  Score=48.53  Aligned_cols=52  Identities=37%  Similarity=0.712  Sum_probs=38.4

Q ss_pred             eeecceeeecccccCcccc-----cCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc
Q 010831          216 EFELSHLETCEVCTGTGAK-----MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  279 (499)
Q Consensus       216 ~i~v~~~~~C~~C~GsG~~-----~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~  279 (499)
                      .........|..|.|.|..     ......+|..|+|.|.+..            ..|..|.|.|.+..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~------------~~c~~~~g~~~v~~  231 (288)
T KOG0715|consen  175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR------------DNCQACSGAGQVRR  231 (288)
T ss_pred             cccccccccchhhhCcccccccccCCcceeecccccccceecc------------chHHHhhcchhhhh
Confidence            4456677899999999932     2222337999999998764            44999999996543

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=81.38  E-value=1.4  Score=44.20  Aligned_cols=50  Identities=32%  Similarity=0.584  Sum_probs=31.5

Q ss_pred             eecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeec
Q 010831          223 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC  285 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C  285 (499)
                      -.|..|.|-+.      ..|..|+|+-++...    ....-....|..|+--|-+.   |+.|
T Consensus       230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~----~~~~~~~~rC~~CNENGLvr---Cp~C  279 (281)
T KOG2824|consen  230 GVCESCGGARF------LPCSNCHGSCKVHEE----EEDDGGVLRCLECNENGLVR---CPVC  279 (281)
T ss_pred             CcCCCcCCcce------EecCCCCCceeeeee----ccCCCcEEECcccCCCCcee---CCcc
Confidence            56777777654      468888888776552    11222336788888877753   5555

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=81.13  E-value=2.9  Score=40.23  Aligned_cols=40  Identities=35%  Similarity=0.434  Sum_probs=31.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchh
Q 010831           86 PKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD  132 (499)
Q Consensus        86 ~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~  132 (499)
                      +++|+.+||++|+.++..+|--|       ++.-.+|..||+.+.=.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~ILM~   40 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAILME   40 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHHHH
Confidence            57899999999999999999433       45566788999865433

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>PRK14714 DNA polymerase II large subunit; Provisional

Probab=80.02  E-value=1.1  Score=53.27  Aligned_cols=67  Identities=27%  Similarity=0.527  Sum_probs=42.0

Q ss_pred             cccccc--------cceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCE
Q 010831          205 EFSESI--------FGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  276 (499)
Q Consensus       205 tl~ea~--------~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~  276 (499)
                      ++.+|+        .+...++++. ...|+.|.....     ...|+.|+..-..             ...|+.|+..=.
T Consensus       643 ~I~kAa~~a~~~~d~~G~ieVEV~-~rkCPkCG~~t~-----~~fCP~CGs~te~-------------vy~CPsCGaev~  703 (1337)
T PRK14714        643 DVAKAAKHAPDMSDEGGVIEVEVG-RRRCPSCGTETY-----ENRCPDCGTHTEP-------------VYVCPDCGAEVP  703 (1337)
T ss_pred             cHHHHHHhhhhccccCCeEEEEEE-EEECCCCCCccc-----cccCcccCCcCCC-------------ceeCccCCCccC
Confidence            456666        4455555554 578999987543     2489999875311             147999998410


Q ss_pred             ---EEceeeeeccCceE
Q 010831          277 ---VISEYCRKCSGEGR  290 (499)
Q Consensus       277 ---~i~~~C~~C~G~G~  290 (499)
                         .....|+.|...-.
T Consensus       704 ~des~a~~CP~CGtplv  720 (1337)
T PRK14714        704 PDESGRVECPRCDVELT  720 (1337)
T ss_pred             CCccccccCCCCCCccc
Confidence               01338999976554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	499
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		2e-20
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		5e-18
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		2e-17
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		9e-05
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		6e-17
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		2e-16
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		2e-16
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-16
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		5e-16
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		1e-15
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		1e-15
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		9e-15
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		1e-14
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-14
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-14
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		3e-14
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		3e-14
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-13
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		3e-13
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		4e-13
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		6e-11
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		6e-10
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		2e-09
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-07
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-07
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		4e-07
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		5e-06
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		6e-06
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		7e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		3e-04
2ys8_A	90	Solution Structure Of The Dnaj-Like Domain From Hum		8e-04
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		9e-04

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 58/72 (80%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY TLG+ + AS +EIK AYR+ A +YHPD NKEPGA EKFKEI+ AY+VLSD +KR +
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63
Query: 138 YDQYGEAGVKST 149
           +D+YGE G+K +
Sbjct: 64  FDRYGEEGLKGS 75

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           +SGDYY  LGVP++AS KEIK AY +LA++YHPD NK +P A EKF +++ AYEVLSD+ 
Sbjct: 5   SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV 64
Query: 134 KRAMYDQYG 142
           KR  YD YG
Sbjct: 65  KRKQYDAYG 73

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 116/268 (43%), Gaps = 52/268 (19%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYYA LGV  +   K IK AYR+LAR+YHPDV+KE  A  KFK+++ A+EVL D+++RA 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88
Query: 138 YDQY----GEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTV 192
           YDQ      + G          +Y+   F D+F +                   RRR   
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQA-----------HQRRRQHA 137
Query: 193 TKGEDLRYDIVLEFSESIFGAEKEFELSH---------------LETCEVCTGTGAKMGS 237
            +G DL  ++ +   E++  AE+   +S+                +T  V    G   G 
Sbjct: 138 ARGHDLEIEVAVFLEETL--AEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQ 195
Query: 238 KMRI--CSTCGGRGQVMRTDQTPFG-LFSQVSVCPS-----CGGEGEVISEYCRKCSGEG 289
           ++R+    T G  G        P G L+  + + P       G   E++       +  G
Sbjct: 196 RIRLKGQGTPGENG-------GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALG 248
Query: 290 R----IRLKKNIKVKVPPGVSTGSILRV 313
                  LK++I + VPPG   G  LR+
Sbjct: 249 AKVTVPTLKESILLTVPPGSQAGQRLRI 276

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 295 KNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISI 354
           K + VK+P GV  G  +R+              DL++ + +   P     G +L   + +
Sbjct: 181 KTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPL 240
Query: 355 SYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT 414
           +  +A +G  V V T++    L VPPG+Q G  L +  KG   L   +  GD    +K+ 
Sbjct: 241 APWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKG---LVSKTHTGDLFAVIKIV 297
Query: 415 IPNR 418
           +P +
Sbjct: 298 MPTK 301

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/63 (60%), Positives = 50/63 (79%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYYA +GV  +   K IK AYR+LAR+YHPDV+KEP A  +FKE++ A+EVLSD+++RA 
Sbjct: 6   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 65
Query: 138 YDQ 140
           YDQ
Sbjct: 66  YDQ 68

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKK 134
           +SGDYY  LGV + AS +++K AYR+LA ++HPD N  PGATE FK I  AY VLS+ +K
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEK 64
Query: 135 RAMYDQYG 142
           R  YDQ+G
Sbjct: 65  RKQYDQFG 72

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 70  RSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVL 129
           +S+     D Y  LGV ++AS  +IK AY+KLAR++HPD NK+PGA ++F +IS AYE+L
Sbjct: 10  QSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEIL 69
Query: 130 SDDKKRAMYDQYG 142
           S+++KR  YD YG
Sbjct: 70  SNEEKRTNYDHYG 82

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           A  DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 134 KRAMYDQYGEAG 145
           KRA YDQYG A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           A  DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 134 KRAMYDQYGEAG 145
           KRA YDQYG A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 48/73 (65%)
Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY 138
           YY  LGVPKSAS ++IK A+ KLA +YHPD NK P A  KF+EI+ AYE LSD  +R  Y
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 139 DQYGEAGVKSTVG 151
           D  G +   S  G
Sbjct: 69  DTLGHSAFTSGKG 81

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           A  DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 134 KRAMYDQYGEAG 145
           KRA YDQYG A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG--ATEKFKEISAAYEVLSDDKKRA 136
           YY  L VP+SAS  +IK AYR+ A Q+HPD N +    A +KFKE++ AYEVLSD  KR 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 137 MYDQYGEAGVKSTVGGGSSA 156
           +YD+YG  G+  T  G S A
Sbjct: 64  IYDRYGREGLTGTGTGPSRA 83

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY 138
           YY  LGV   AS  E+K AYRK+A ++HPD  K P   E+FK+IS AYEVLSD+KKR +Y
Sbjct: 10  YYDVLGVKPDASDNELKKAYRKMALKFHPD--KNPDGAEQFKQISQAYEVLSDEKKRQIY 67
Query: 139 DQYGE 143
           DQ GE
Sbjct: 68  DQGGE 72

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 79  YYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMY 138
           YY  LGV  +A+ +E+K AYRKLA +YHPD N  P   EKFK+IS AYEVLSD KKR +Y
Sbjct: 8   YYDVLGVKPNATQEELKKAYRKLALKYHPDKN--PNEGEKFKQISQAYEVLSDAKKRELY 65
Query: 139 DQYGE 143
           D+ GE
Sbjct: 66  DKGGE 70

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVN-KEPGATEKFKEISAAYEVLSDDKKRA 136
           ++Y+ LGV K+AS +EI+ A++KLA + HPD N   P A   F +I+ AYEVL D+  R 
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81
Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDL 164
            YD+YGE G++   GG   +++   +D 
Sbjct: 82  KYDKYGEKGLEDNQGGQYESWSYYRYDF 109

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKR 135
           DYY  L VP+ AS + IK AYRKLA ++HPD N E    A  +FK+++ AYEVLSD KKR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69
Query: 136 AMYDQYG 142
            +YD+YG
Sbjct: 70  DIYDRYG 76

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVN-KEPGATEKFKEISAAYEVLSDDKKRA 136
           ++Y+ LGV K+AS +EI+ A++KLA + HPD N   P A   F +I+ AYEVL D+  R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDL 164
            YD+YGE G++   GG   +++   +D 
Sbjct: 63  KYDKYGEKGLEDNQGGQYESWSYYRYDF 90

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 70  RSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEV 128
           RS+  +    Y  LG+ K+A+  +IK +YRKLA +YHPD N + P A +KFKEI+ A+ +
Sbjct: 10  RSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAI 69
Query: 129 LSDDKKRAMYDQYGEAGV 146
           L+D  KR +YD+YG  G+
Sbjct: 70  LTDATKRNIYDKYGSLGL 87

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 80  YATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYD 139
           Y  LGV  SA+ +E+K  YRK A +YHPD  K  G TEKFKEIS A+E+L+D +KR +YD
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQKREIYD 68
Query: 140 QYGEAGVKS 148
           QYG    +S
Sbjct: 69  QYGLEAARS 77

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 77  GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVN--KEPGATEKFKEISAAYEVLSDDKK 134
            +YY  LGV  SAS ++IK AYRKLA ++HPD N   +  A +KFK +S AYEVLSD KK
Sbjct: 9   ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68
Query: 135 RAMYDQYG 142
           R++YD+ G
Sbjct: 69  RSLYDRAG 76

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 215 KEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV-MRTDQTPFGLFSQVSVCPSCGG 273
           KE  +  LE C+VC G+GAK G++ + C TC G GQV MR      G F+    CP C G
Sbjct: 4   KEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ-----GFFAVQQTCPHCQG 58
Query: 274 EGEVISEYCRKCSGEGRI 291
            G +I + C KC G GR+
Sbjct: 59  RGTLIKDPCNKCHGHGRV 76

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 253
           +G+D++++I     E   G   +  L+    C+ C G G K G+ ++ C++C G+G    
Sbjct: 10  RGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFV 68
Query: 254 TDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 311
           T Q    +    + C  C G G++I   + C+ C+G+     +K ++V V PG+  G   
Sbjct: 69  TRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQ-- 126
Query: 312 RVVXXXXXXXXXXXXXDLYVYLDVEEIP--GIQRDGIDLFSTISISYLDAIMGTVVKVKT 369
           R+V                V++ V E P    +RDG DL     I  L AI G    ++ 
Sbjct: 127 RIVFKGEADQAPDVIPGDVVFI-VSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEH 185
Query: 370 VEGISELQVPPGTQPGDVL------VLAKKGAP 396
           V G   L+V  G  PG+V+      V+  KG P
Sbjct: 186 VSG-DWLKV--GIVPGEVIAPGMRKVIEGKGMP 215

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 204 LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFS 263
           L F+++  G  KEF ++ ++TCE C G G + G+K++ C  CGG G  M T  T  G F 
Sbjct: 10  LTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG--METINT--GPFV 65
Query: 264 QVSVCPSCGGEGEVISEYCRKCSGEGRIRLKK 295
             S C  CGG G +I   C  C G G+ + KK
Sbjct: 66  MRSTCRRCGGRGSIIISPCVVCRGAGQAKQKK 97

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPD----VNKEPGATEKFKEISAAYEVLSDDK 133
           DYY  LGV ++A  +EI  AYRKLA Q+HPD      ++  A +KF +I+AA EVLSD +
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 134 KRAMYD 139
            R  +D
Sbjct: 443 XRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPD----VNKEPGATEKFKEISAAYEVLSDDK 133
           DYY  LGV ++A  +EI  AYRKLA Q+HPD      ++  A +KF +I+AA EVLSD +
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 134 KRAMYD 139
            R  +D
Sbjct: 443 MRKKFD 448

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 63  SSTYRFGRSVVCASGDYYATLGVPKSASGKE-IKAAYRKLARQYHPD--VNKEPG--ATE 117
           S+   F   + C   + Y  L V +    K+ +  AYR LAR++HPD   NKE    A E
Sbjct: 1   SNAVGFAPELYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEE 60
Query: 118 KFKEISAAYEVLSDDKKRAMYDQY 141
           +F+ I+ AYE L DD+ +  YD Y
Sbjct: 61  RFRVIATAYETLKDDEAKTNYDYY 84

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 80  YATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG-ATEKFKEISAAYEVLSDDKKRAMY 138
           Y  LGVP +A+  +IKAAY +    YHPD N     A E+F  IS AY VL     R  Y
Sbjct: 20  YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKY 79
Query: 139 DQ 140
           D+
Sbjct: 80  DR 81

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LG  + +S ++I A ++  A + HPD + E P A E F+++  A E+L++++ RA
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 137 MYDQY 141
            YD +
Sbjct: 81  RYDHW 85

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGAT-----EKFKEISAAYEVLS 130
           D+Y+ LG   SA+  ++K  Y+KL   YHPD      P  T     +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 131 DDKKRAMYD 139
           +++ +  YD
Sbjct: 71  NEETKREYD 79

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGAT-----EKFKEISAAYEVLS 130
           D+Y+ LG   SA+  ++K  Y+KL   YHPD      P  T     +KF EI  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 131 DDKKRAMYD 139
           +++ +  YD
Sbjct: 77  NEETKKKYD 85

>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 76  SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVL 129
           S D +  LGV   AS  E+  AYRKLA   HPD    PG+ + FK +  A   L
Sbjct: 26  SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTAL 79

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 294 KKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTIS 353
           K  I +++ PG   G+ +                 L   +  +  P  +RDG DL  T+ 
Sbjct: 35  KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94
Query: 354 ISYLDAIMGTVVKVKTVEG----ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLF 409
           +S+ ++++G    ++T++G    +S +Q     QP        +G P    PS RG+ + 
Sbjct: 95  LSFKESLLGFSKTIQTIDGRTLPLSRVQ---PVQPSQTSTYPGQGMPTPKNPSQRGNLIV 151
Query: 410 TVKVTIP 416
             KV  P
Sbjct: 152 KYKVDYP 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	499
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	1e-100
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	6e-79
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-44
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	6e-44
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	2e-42
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	2e-40
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	3e-40
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	5e-40
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-39
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	3e-39
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	9e-39
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	4e-38
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	6e-38
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	7e-38
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-37
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	2e-37
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	4e-37
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	7e-37
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-36
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	3e-36
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	8e-36
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	1e-35
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	9e-35
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	3e-34
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	2e-32
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-32
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	5e-31
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-30
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	1e-29
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	2e-27
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	6e-22
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	1e-20
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	5e-08
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-19
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	1e-19
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	3e-19
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	6e-17
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	3e-14
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	3e-13
2guz_A	71	Mitochondrial import inner membrane translocase su	3e-12
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	4e-12
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	5e-09
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  302 bits (776), Expect = e-100
 Identities = 95/364 (26%), Positives = 148/364 (40%), Gaps = 78/364 (21%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYYA LGV  +   K IK AYR+LAR+YHPDV+KE  A  KFK+++ A+EVL D+++RA 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88

Query: 138 YDQYGEAGVKSTVGGGSSAYTTNPF-----DLFETFFGPSMGGFPGMNQTGFRTRRRSTV 192
           YDQ  +       G     +  +       D+F + FG                RRR   
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFG-----------QQAHQRRRQHA 137

Query: 193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 252
            +G DL  ++ +   E++    +    +                          G  +  
Sbjct: 138 ARGHDLEIEVAVFLEETLAEQTRTISYN-------------------LPVYNVFGMIESE 178

Query: 253 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 312
                                                     K + VK+P GV  G  +R
Sbjct: 179 TP----------------------------------------KTLNVKIPAGVVDGQRIR 198

Query: 313 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 372
           + G+G  G  GGP GDL++ + +   P     G +L   + ++  +A +G  V V T++ 
Sbjct: 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE 258

Query: 373 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 432
              L VPPG+Q G  L +  KG       +  GD    +K+ +P +   K REL ++LA+
Sbjct: 259 SILLTVPPGSQAGQRLRIKGKGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAA 315

Query: 433 LRNT 436
              +
Sbjct: 316 AEAS 319

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  245 bits (629), Expect = 6e-79
 Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 8/247 (3%)

Query: 187 RRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCG 246
           +R     +G+D++++I     E   G   +  L+    C+ C G G K G+  + C++C 
Sbjct: 3   QRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKK-CTSCN 61

Query: 247 GRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY--CRKCSGEGRIRLKKNIKVKVPPG 304
           G+G    T Q    +    + C  C G G++I     C+ C+G+     +K ++V V PG
Sbjct: 62  GQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPG 121

Query: 305 VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTV 364
           +  G  +   GE D  P    PGD+   +        +RDG DL     I  L AI G  
Sbjct: 122 MKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGE 180

Query: 365 VKVKTVEG-ISELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISA 421
             ++ V G   ++ + PG    PG   V+  KG P        G+ +    +  P     
Sbjct: 181 FALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG-YGNLIIKFTIKDPENHFT 239

Query: 422 KERELLE 428
            E  L +
Sbjct: 240 SEENLKK 246

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  149 bits (378), Expect = 3e-44
 Identities = 39/85 (45%), Positives = 56/85 (65%)

Query: 63  SSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEI 122
           S +    +S+     D Y  LGV ++AS  +IK AY+KLAR++HPD NK+PGA ++F +I
Sbjct: 3   SGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQI 62

Query: 123 SAAYEVLSDDKKRAMYDQYGEAGVK 147
           S AYE+LS+++KR  YD YG     
Sbjct: 63  SKAYEILSNEEKRTNYDHYGSGPSS 87

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  148 bits (376), Expect = 6e-44
 Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 3/76 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY TLG+ + AS +EIK AYR+ A +YHPD NKEPGA EKFKEI+ AY+VLSD +KR +
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63

Query: 138 YDQYGEAGVKSTVGGG 153
           +D+YGE G+K   G G
Sbjct: 64  FDRYGEEGLK---GSG 76

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  144 bits (365), Expect = 2e-42
 Identities = 39/73 (53%), Positives = 50/73 (68%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKK 134
           +SGDYY  LGV + AS +++K AYR+LA ++HPD N  PGATE FK I  AY VLS+ +K
Sbjct: 5   SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEK 64

Query: 135 RAMYDQYGEAGVK 147
           R  YDQ+G     
Sbjct: 65  RKQYDQFGSGPSS 77

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  139 bits (353), Expect = 2e-40
 Identities = 40/76 (52%), Positives = 48/76 (63%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
            YY  LGVPKSAS ++IK A+ KLA +YHPD NK P A  KF+EI+ AYE LSD  +R  
Sbjct: 8   SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67

Query: 138 YDQYGEAGVKSTVGGG 153
           YD  G +   S  G  
Sbjct: 68  YDTLGHSAFTSGKGQS 83

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  139 bits (352), Expect = 3e-40
 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKR 135
            YY  L VP+SAS  +IK AYR+ A Q+HPD N +    A +KFKE++ AYEVLSD  KR
Sbjct: 3   SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGP 171
            +YD+YG  G+  T  G S A   +     E     
Sbjct: 63  EIYDRYGREGLTGTGTGPSRAEAGSGGPGLEHHHHH 98

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  139 bits (352), Expect = 5e-40
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 11/110 (10%)

Query: 70  RSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEV 128
           RS+  +    Y  LG+ K+A+  +IK +YRKLA +YHPD N + P A +KFKEI+ A+ +
Sbjct: 10  RSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAI 69

Query: 129 LSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPG 178
           L+D  KR +YD+YG  G+      G         +   T+F    G   G
Sbjct: 70  LTDATKRNIYDKYGSLGLYVAEQFG--------EENVNTYF--VSGPSSG 109

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  137 bits (348), Expect = 1e-39
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +KRA
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETFFGPSMGG 175
            YDQYG A  +    GG        F D+F   FG   GG
Sbjct: 64  AYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGG 103

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  140 bits (355), Expect = 3e-39
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 26/152 (17%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRA 136
           ++Y+ LGV K+AS +EI+ A++KLA + HPD N   P A   F +I+ AYEVL D+  R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 196
            YD+YGE G++   GG         ++ +  +                  R         
Sbjct: 63  KYDKYGEKGLEDNQGGQ--------YESWSYYRYDFGIYDDDPEIITLERRE-------- 106

Query: 197 DLRYDIVLEFSESIFGAEKEFELSHLETCEVC 228
                    F  ++   E  F   +   C  C
Sbjct: 107 ---------FDAAVNSGELWFVNFYSPGCSHC 129

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score =  135 bits (343), Expect = 9e-39
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 254
           G      + L F+++  G  KEF ++ ++TCE C G G + G+K++ C  CGG G     
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGME-TI 59

Query: 255 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVK 300
           +    G F   S C  CGG G +I   C  C G G+ + KK     
Sbjct: 60  NT---GPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGPS 102

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  133 bits (337), Expect = 4e-38
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
             Y  LGV  SA+ +E+K  YRK A +YHPD     G TEKFKEIS A+E+L+D +KR +
Sbjct: 9   KLYDLLGVSPSANEQELKKGYRKAALKYHPDKP--TGDTEKFKEISEAFEILNDPQKREI 66

Query: 138 YDQYGEAGVKSTVGGGSSA 156
           YDQYG    +S        
Sbjct: 67  YDQYGLEAARSGGPSFGPG 85

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  133 bits (336), Expect = 6e-38
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 2/81 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKR 135
           +YY  LGV  SAS ++IK AYRKLA ++HPD N +    A +KFK +S AYEVLSD KKR
Sbjct: 10  NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69

Query: 136 AMYDQYGEAGVKSTVGGGSSA 156
           ++YD+ G    ++  G    +
Sbjct: 70  SLYDRAGCDSWRAGGGASGPS 90

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  132 bits (334), Expect = 7e-38
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LGVP++AS KEIK AY +LA++YHPD NK +P A EKF +++ AYEVLSD+ KR 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67

Query: 137 MYDQYGEAGV 146
            YD YG    
Sbjct: 68  QYDAYGSGPS 77

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  131 bits (331), Expect = 2e-37
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKR 135
           DYY  L VP+ AS + IK AYRKLA ++HPD N E    A  +FK+++ AYEVLSD KKR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69

Query: 136 AMYDQYGEAGVK 147
            +YD+YG     
Sbjct: 70  DIYDRYGSGPSS 81

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  132 bits (333), Expect = 2e-37
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRA 136
           DYY  LG  + +S ++I A ++  A + HPD + E P A E F+++  A E+L++++ RA
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80

Query: 137 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMG 174
            YD +  + +        +       D  +T  GPS G
Sbjct: 81  RYDHWRRSQMSMPFQQWEAL-----NDSVKT-SGPSSG 112

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  133 bits (337), Expect = 4e-37
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)

Query: 284 KCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQR 343
              G      K  I +++ PG   G+ +    +GD  P+ G    L   +  +  P  +R
Sbjct: 25  GRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKR 84

Query: 344 DGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPS 402
           DG DL  T+ +S+ ++++G    ++T++G    L      QP        +G P    PS
Sbjct: 85  DGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPS 144

Query: 403 IRGDHLFTVKVTIPNRISAKERELLE 428
            RG+ +   KV  P  ++  ++  ++
Sbjct: 145 QRGNLIVKYKVDYPISLNDAQKRAID 170

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  129 bits (327), Expect = 7e-37
 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
            YY  LGV   AS  E+K AYRK+A ++HPD N  P   E+FK+IS AYEVLSD+KKR +
Sbjct: 9   GYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEKKRQI 66

Query: 138 YDQYGE 143
           YDQ GE
Sbjct: 67  YDQGGE 72

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  129 bits (326), Expect = 2e-36
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 63  SSTYRFGRSVVCASGDYYATLGVPKSA-SGKEIKAAYRKLARQYHPDVNKEP----GATE 117
           S+   F   + C   + Y  L V +     +++  AYR LAR++HPD  K       A E
Sbjct: 1   SNAVGFAPELYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEE 60

Query: 118 KFKEISAAYEVLSDDKKRAMYDQYGEAG 145
           +F+ I+ AYE L DD+ +  YD Y +  
Sbjct: 61  RFRVIATAYETLKDDEAKTNYDYYLDHP 88

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  128 bits (324), Expect = 3e-36
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 62  RSSTYRFGRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFK 120
             S+   G     +    Y  LGVP +A+  +IKAAY +    YHPD N     A E+F 
Sbjct: 3   SGSSGSQGDCSY-SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFT 61

Query: 121 EISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS 154
            IS AY VL     R  YD+   +       G  
Sbjct: 62  RISQAYVVLGSATLRRKYDRGLLSDEDLRGPGSG 95

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  129 bits (326), Expect = 8e-36
 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-------EPGATEKFKEISAAYEVLS 130
           D+Y+ LG   SA+  ++K  Y+KL   YHPD               +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 131 DDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDL---FETFFGPSMGGF 176
           +++ +  YD          VG   +              +F+     G 
Sbjct: 71  NEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGG 119

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  130 bits (328), Expect = 1e-35
 Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 271 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 330
             G+ + I    ++         +  ++V++ PG   G+ L   GEGD    G  PGDL 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 331 VYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG--TQPGDVL 388
           + +  +  P   RD   L   ++I  + A+ G    V T++    LQ+P      P    
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDN-RNLQIPIKEIVNPKTRK 136

Query: 389 VLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 430
           ++  +G P  N+P  +GD +    +  P  ++ ++++L++E 
Sbjct: 137 IVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEA 178

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  124 bits (313), Expect = 9e-35
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-------EPGATEKFKEISAAYEVLS 130
           D+Y+ LG   SA+  ++K  Y+KL   YHPD               +KF EI  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 131 DDKKRAMYDQYGEAG 145
           +++ +  YD      
Sbjct: 77  NEETKKKYDLQRSGP 91

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  122 bits (309), Expect = 3e-34
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 53  GSKLNSSNARSSTYRFGRSV--VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVN 110
           GS  +S ++ S T     ++  +  S D +  LGV   AS  E+  AYRKLA   HPD  
Sbjct: 1   GSSGSSGSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKC 60

Query: 111 KEPGATEKFKEISAAYEVLSDDKKRAMYD 139
             PG+ + FK +  A   L  + K     
Sbjct: 61  VAPGSEDAFKAVVNARTALLKNIKSGPSS 89

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  118 bits (298), Expect = 2e-32
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 78  DYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
                LG+ +SA G    ++ AY K  +++HPD     G  EK K+++  Y+ + D  K 
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKMEDGVKY 65

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPFDLF 165
           A    +G     + +    +      ++ F
Sbjct: 66  AHQPDFGGFWDATEIPTYGTDEWEQWWNAF 95

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  120 bits (303), Expect = 2e-32
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 19/99 (19%)

Query: 78  DYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
                LG+ +SA G    ++ AY K  +++HPD     G  EK K+++  Y+ + D  K 
Sbjct: 12  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKMEDGVKY 68

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMG 174
           A    +G                 +  ++F +   P + 
Sbjct: 69  AHQPDFGGFW--------------DATEVFASSLNPGVD 93

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  117 bits (295), Expect = 5e-31
 Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 5/166 (3%)

Query: 267 VCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPP 326
           +   C  + + IS       G+      K + ++V  G   G+ +    EGD       P
Sbjct: 16  IYSGCTKKMK-ISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIP 73

Query: 327 GDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG--TQP 384
            D+   L  +     +RDG D+     IS  +A+ G  V V T++G   + V      +P
Sbjct: 74  ADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG-RTIPVVFKDVIRP 132

Query: 385 GDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 430
           G    +  +G P    P  RGD +   +V  P RI    R +LE++
Sbjct: 133 GMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  113 bits (284), Expect = 1e-30
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKR 135
           +  + +         E K   R+L  ++HPD N E    A E FK +      L    K+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQ 73

Query: 136 AMYDQYGEAGVKST 149
           A  DQ  +   + T
Sbjct: 74  AFLDQNADRASRRT 87

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  122 bits (306), Expect = 1e-29
 Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 6/173 (3%)

Query: 69  GRSVVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYE 127
           G        ++Y+ LGV K+AS +EI+ A++KLA + HPD N   P A   F +I+ AYE
Sbjct: 13  GHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYE 72

Query: 128 VLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTR 187
           VL D+  R  YD+YGE G++   GG   +++   +D       P +              
Sbjct: 73  VLKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNS 132

Query: 188 RRSTV----TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMG 236
                    + G    +D+   + E     +    +  +  C          G
Sbjct: 133 GELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVN-CGDDRMLCRMKG 184

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score =  104 bits (261), Expect = 2e-27
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 271
           G  KE  +  LE C+VC G+GAK G++ + C TC G GQV +  Q   G F+    CP C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQV-QMRQ---GFFAVQQTCPHC 56

Query: 272 GGEGEVISEYCRKCSGEGRIR 292
            G G +I + C KC G GR+ 
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 97.4 bits (243), Expect = 6e-22
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 4/67 (5%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDK 133
           DYY  LGV ++A  +EI  AYRKLA Q+HPD  +       A +KF +I+AA EVLSD +
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442

Query: 134 KRAMYDQ 140
            R  +D 
Sbjct: 443 MRKKFDD 449

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 86.1 bits (214), Expect = 1e-20
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 342 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKP 401
              G +L   + ++  +A +G  V V T++    L VPPG+Q G  L +  KG       
Sbjct: 8   DIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLV---SK 64

Query: 402 SIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 436
           +  GD    +K+ +P +   K REL ++LA+   +
Sbjct: 65  THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEAS 99

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 49.9 bits (120), Expect = 5e-08
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 297 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVE 336
           I + VPPG   G  LR+ G+G         GDL+  + + 
Sbjct: 40  ILLTVPPGSQAGQRLRIKGKG--LVSKTHTGDLFAVIKIV 77

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 85.8 bits (212), Expect = 1e-19
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 10/99 (10%)

Query: 78  DYYATLGVPKSASG-------KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLS 130
            +Y                    ++  YR+L  Q+HPD+      +E+   ++ AY  L 
Sbjct: 12  TFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMA--QQGSEQSSTLNQAYHTLK 69

Query: 131 DDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFD-LFETF 168
           D  +R+ Y       +  T    S+  TT+    L +  
Sbjct: 70  DPLRRSQYMLKLLRNIDLTQEQTSNEVTTSDPQLLLKVL 108

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 85.0 bits (210), Expect = 1e-19
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 78  DYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPGATEK------FKEISAAYEVL 129
           DY+   G+P       + +   ++ L RQYHPD        E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 130 SDDKKRAMYD 139
                RA Y 
Sbjct: 62  RHPLMRAEYL 71

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 74.6 bits (183), Expect = 6e-17
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 78  DYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
                L +P+   G    ++ AY++ +   HPD     G+    +E+++ +     +   
Sbjct: 12  RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYN 68

Query: 136 AMYDQYG 142
              +  G
Sbjct: 69  LRMNLGG 75

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 70.5 bits (172), Expect = 3e-14
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 78  DYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPGATEK------FKEISAAYEVL 129
           DY++ +   +S      +++  Y++L R  HPD   +   TEK         ++ AY+ L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 130 SDDKKRAMYD 139
                R +Y 
Sbjct: 104 LAPLSRGLYL 113

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 67.2 bits (163), Expect = 3e-13
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK----EPGATEKFKEISAAYEVLSDDK 133
             +  +G+    + +++K  YRK     HPD       E  A   F E++ A+    +  
Sbjct: 118 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 177

Query: 134 KRAMY 138
           ++ +Y
Sbjct: 178 QKPLY 182

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 60.8 bits (148), Expect = 3e-12
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 78  DYYATLGVPKSA-SGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
           +    L + ++  + K++K  +RK+    HPD     G+     +I+ A + L      
Sbjct: 15  EALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 342 QRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPG--TQPGDVLVLAKKGAPKL 398
           +RDG DL     I  L AI G    ++ V G   ++ + PG    PG   V+  KG P  
Sbjct: 3   KRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIP 62

Query: 399 NKPSIRGDHLFTVKVTIPNR--ISAKERELLEEL 430
                 G+ +    +  P     S +  + LEE+
Sbjct: 63  KYGG-YGNLIIKFTIKFPENHFTSEENLKKLEEI 95

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 53.1 bits (127), Expect = 5e-09
 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 76  SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEIS-AAYEVLSDDKK 134
           SG  +  + +     G  ++ +Y++     HPD  ++ GA+   K ++   +E+L +   
Sbjct: 39  SGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQE--- 95

Query: 135 RAMYDQYGEAG 145
            A +D +   G
Sbjct: 96  -A-WDHFNTLG 104

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 80  YATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSD 131
           +  +G+    + +++K  YRK     HP           A   F E++ A+    +
Sbjct: 36  WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 54/433 (12%), Positives = 104/433 (24%), Gaps = 138/433 (31%)

Query: 93  EIKAAYRKLARQYHP------------DVNKEPGATEKFKEISAAYEVLSDDKKRAMY-- 138
           E +  Y+ +   +              D+ K   + E+   I     ++S D        
Sbjct: 13  EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI-----IMSKDAVSGTLRL 67

Query: 139 ----DQYGEAGVKSTVGGGSSA-YTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 193
                   E  V+  V       Y    F L            P M    +  +R     
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLRINY---KF-LMSPIKTEQRQ--PSMMTRMYIEQRDRLYN 121

Query: 194 KGEDL------RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGG 247
             +        R    L+  +++       EL   +   +        G  +       G
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALL------ELRPAKNVLID-------G--V------LG 160

Query: 248 RG------QVMRTDQT----PFGLF-SQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKN 296
            G       V  + +      F +F   +  C S     E++ +   +       R   +
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 297 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS------ 350
             +K+        + R++              L V L+V+          + F+      
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKP-YENC-----LLVLLNVQN-AKA----WNAFNLSCKIL 269

Query: 351 --TISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL 408
             T      D +        +++  S                                  
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMT-------------------------------- 297

Query: 409 FTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNE 468
            T              E+   L         R +  P+     TT+P    +  +AE   
Sbjct: 298 LT------------PDEVKSLLL---KYLDCRPQDLPR--EVLTTNPRR--LSIIAESIR 338

Query: 469 EPEDQNDPWKKLK 481
           +     D WK + 
Sbjct: 339 DGLATWDNWKHVN 351

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	499
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.94
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.92
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.9
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.87
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.87
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.84
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.83
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.82
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.82
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.82
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.82
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.82
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.8
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.8
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.78
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.76
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.76
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.75
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.71
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.71
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.7
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.68
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.68
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.66
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.64
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.64
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.63
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.62
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.61
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.59
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.58
2guz_A	71	Mitochondrial import inner membrane translocase su	99.58
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.57
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.31
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.97
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	98.97
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.91
2guz_B	65	Mitochondrial import inner membrane translocase su	98.72
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.57
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.56
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.48
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.41
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	98.12
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.72
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.64
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.53
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.5
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.1
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	96.7
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	89.89

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=5.1e-68  Score=542.33  Aligned_cols=287  Identities=33%  Similarity=0.557  Sum_probs=161.1

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC-
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG-  153 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~-  153 (499)
                      ...|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+|+..+...+.+++ 
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~  105 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR  105 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence            3579999999999999999999999999999999998888999999999999999999999999999544322111110 


Q ss_pred             ---CCCC-ccCCCCccccccCCCCCCCCCCCCCCCCcccccccccCcceEEeeeecccccccceeeeeecceeeeccccc
Q 010831          154 ---SSAY-TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCT  229 (499)
Q Consensus       154 ---~~~~-~~~~~diF~~fFg~~~gg~~~~~~~~~~~~~~~~~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~  229 (499)
                         .++| ..++.|||++|||++  +++        + ++.+..+|.|+.++|.|+|+|+|+|++++|.+++.+.|    
T Consensus       106 ~~~~~~f~~~~f~diF~~~Fg~~--g~~--------~-~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----  170 (329)
T 3lz8_A          106 QTHEQSYSQQDFDDIFSSMFGQQ--AHQ--------R-RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----  170 (329)
T ss_dssp             ------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----
T ss_pred             ccccCCcCCCchhhhhHhhhcCc--CCC--------C-CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----
Confidence               1112 124568888888731  110        0 11124679999999999999999999999998765421    


Q ss_pred             CcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCC
Q 010831          230 GTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGS  309 (499)
Q Consensus       230 GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~  309 (499)
                                       |.|++                                      .+...++|+|+||||+++|+
T Consensus       171 -----------------g~G~v--------------------------------------~~~~~~~l~V~IP~Gv~~G~  195 (329)
T 3lz8_A          171 -----------------VFGMI--------------------------------------ESETPKTLNVKIPAGVVDGQ  195 (329)
T ss_dssp             -----------------SCC-C--------------------------------------CEEEEEEEEEEECTTCCTTC
T ss_pred             -----------------CCeEE--------------------------------------EEecceEEEEeCCCCCCCCC
Confidence                             22221                                      12235689999999999999


Q ss_pred             EEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEE
Q 010831          310 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLV  389 (499)
Q Consensus       310 ~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~  389 (499)
                      +|||+|+|+++++++++|||||+|+|++|+.|+|+|+||+++++|+++|||||++++|+||||++.|+||+|+|||++++
T Consensus       196 ~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~r  275 (329)
T 3lz8_A          196 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR  275 (329)
T ss_dssp             EEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEE
T ss_pred             EEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEE
Confidence            99999999998888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHh-hc
Q 010831          390 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS-LR  434 (499)
Q Consensus       390 l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~~-~~  434 (499)
                      |+|+|||..   ..||||||+|+|+||++||++|+++|++|++ ..
T Consensus       276 l~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~  318 (329)
T 3lz8_A          276 IKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA  318 (329)
T ss_dssp             ETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT
T ss_pred             EcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            999999975   3689999999999999999999999999999 44

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=4.7e-61  Score=473.71  Aligned_cols=233  Identities=27%  Similarity=0.509  Sum_probs=209.6

Q ss_pred             cccCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccce-eeeeeCCC
Q 010831          192 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLF-SQVSVCPS  270 (499)
Q Consensus       192 ~~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~-~~~~~C~~  270 (499)
                      ..+|+|++++|.|||+|||+|++++|.+++.+.|+.|+|+|+++++ ..+|+.|+|+|++++.+++++ ++ ++.++|+.
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~   85 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV   85 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence            4579999999999999999999999999999999999999999998 599999999999988888776 44 44589999


Q ss_pred             CCCCCEEE--ceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 010831          271 CGGEGEVI--SEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  348 (499)
Q Consensus       271 C~G~G~~i--~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL  348 (499)
                      |+|+|++|  .++|..|+|.|++++.++|+|+||||+++|++|+|+|+|++++ ++++|||||+|+|++|+.|+|+|+||
T Consensus        86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL  164 (248)
T 1nlt_A           86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDL  164 (248)
T ss_dssp             CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred             CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEE
Confidence            99999999  8999999999999999999999999999999999999999975 56999999999999999999999999


Q ss_pred             EEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCC--CCHHH
Q 010831          349 FSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR--ISAKE  423 (499)
Q Consensus       349 ~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~--Ls~~q  423 (499)
                      |++++|+|+|||||++++|+||||+ +.|+||+|  ||||++++|+|+|||..+++ .+|||||+|+|+||++  ||++|
T Consensus       165 ~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q  243 (248)
T 1nlt_A          165 VYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEEN  243 (248)
T ss_dssp             EEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC--------
T ss_pred             EEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHH
Confidence            9999999999999999999999996 89999999  99999999999999987655 6899999999999999  99999


Q ss_pred             HHHHH
Q 010831          424 RELLE  428 (499)
Q Consensus       424 ~~lL~  428 (499)
                      +++|+
T Consensus       244 ~~~l~  248 (248)
T 1nlt_A          244 LKKLE  248 (248)
T ss_dssp             -----
T ss_pred             HHhhC
Confidence            99985

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=1.9e-46  Score=352.99  Aligned_cols=177  Identities=25%  Similarity=0.369  Sum_probs=158.8

Q ss_pred             CcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCC
Q 010831          195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  274 (499)
Q Consensus       195 g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~  274 (499)
                      ++|++++|.|||+|||+|+++++.+++                                                     
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~-----------------------------------------------------   28 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH-----------------------------------------------------   28 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence            468999999999999999999986532                                                     


Q ss_pred             CEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeee
Q 010831          275 GEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISI  354 (499)
Q Consensus       275 G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I  354 (499)
                            +|..|+|.|++++.++++|+||||+++|++|+|+|+|++++ ++++|||||+|++++|+.|+|+|+|||++++|
T Consensus        29 ------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I  101 (181)
T 3agx_A           29 ------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI  101 (181)
T ss_dssp             ------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred             ------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence                  24445555556678999999999999999999999999987 67999999999999999999999999999999


Q ss_pred             CHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHH
Q 010831          355 SYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  431 (499)
Q Consensus       355 sl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~  431 (499)
                      +++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|++|+
T Consensus       102 sl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~  179 (181)
T 3agx_A          102 SLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL  179 (181)
T ss_dssp             EHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred             CHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            9999999999999999995 7999999999999999999999987655678999999999999999999999999996

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.4e-45  Score=345.28  Aligned_cols=177  Identities=21%  Similarity=0.419  Sum_probs=163.4

Q ss_pred             cCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCC
Q 010831          194 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGG  273 (499)
Q Consensus       194 ~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G  273 (499)
                      +++|++++|.|||+|||+|+++++.+++.+.|+.                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            3689999999999999999999999998887631                                              


Q ss_pred             CCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEee
Q 010831          274 EGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS  353 (499)
Q Consensus       274 ~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~  353 (499)
                                     |++++.++++|+||||+++|++|+|+|+|+++..|+++|||||+|++++|+.|+|+|+|||++++
T Consensus        36 ---------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~  100 (180)
T 2q2g_A           36 ---------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVT  100 (180)
T ss_dssp             ---------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred             ---------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEE
Confidence                           33455789999999999999999999999997678999999999999999999999999999999


Q ss_pred             eCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHH
Q 010831          354 ISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  431 (499)
Q Consensus       354 Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~~l~  431 (499)
                      |+++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|++|+
T Consensus       101 Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~  179 (180)
T 2q2g_A          101 IPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL  179 (180)
T ss_dssp             EEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred             cCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            99999999999999999996 7899999999999999999999987665678999999999999999999999999986

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=7.4e-43  Score=325.39  Aligned_cols=169  Identities=22%  Similarity=0.449  Sum_probs=154.8

Q ss_pred             cceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCC
Q 010831          196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  275 (499)
Q Consensus       196 ~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G  275 (499)
                      +|++++|.|||+|||+|+++++.+++..    +                                               
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-----------------------------------------------   29 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-----------------------------------------------   29 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence            4789999999999999999999987641    0                                               


Q ss_pred             EEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceEEEeeeC
Q 010831          276 EVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISIS  355 (499)
Q Consensus       276 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~~~~~Is  355 (499)
                                  .|++ +.++++|+||||+++|++|+|+|+|+++.+|+++|||||+|++++|+.|+|+|+|||++++|+
T Consensus        30 ------------~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is   96 (170)
T 1c3g_A           30 ------------HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS   96 (170)
T ss_dssp             ------------TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred             ------------CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence                        1222 468899999999999999999999998888999999999999999999999999999999999


Q ss_pred             HHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHH
Q 010831          356 YLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLE  428 (499)
Q Consensus       356 l~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~Ls~~q~~lL~  428 (499)
                      ++||+||++++|+||||+ +.|+||+++|||++++|+|+|||..++++.||||||+|+|+||++||++|+++|+
T Consensus        97 l~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A           97 FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             HHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             HHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            999999999999999996 8999999999999999999999987665578999999999999999999999874

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.94  E-value=2.8e-27  Score=204.44  Aligned_cols=96  Identities=29%  Similarity=0.440  Sum_probs=90.6

Q ss_pred             EeccccccCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEc
Q 010831          336 EEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTI  415 (499)
Q Consensus       336 ~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~  415 (499)
                      ++|+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+|+|+|++++|+|+|||. .+  .+|||||+|+|+|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~--~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT--HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS--CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC--CCcCEEEEEEEEC
Confidence            68999999999999999999999999999999999999999999999999999999999998 32  6999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 010831          416 PNRISAKERELLEELASLR  434 (499)
Q Consensus       416 P~~Ls~~q~~lL~~l~~~~  434 (499)
                      |++||++|+++|++|+++.
T Consensus        79 P~~Ls~~q~~~l~~l~~~~   97 (109)
T 3i38_A           79 PTKPDEKARELWQQLAAAE   97 (109)
T ss_dssp             CSSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999974

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.92  E-value=4.3e-25  Score=194.27  Aligned_cols=94  Identities=29%  Similarity=0.420  Sum_probs=84.5

Q ss_pred             ccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010831          340 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP  416 (499)
Q Consensus       340 ~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P  416 (499)
                      .|+|+|+|||++++|+|.+|+||+++.|+||||+ +.|+||+|  +|||++++|+|+|||..+++ .+|||||+|+|+||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999997 89999999  99999999999999987665 68999999999999


Q ss_pred             CC--CCHHHHHHHHHHHhhc
Q 010831          417 NR--ISAKERELLEELASLR  434 (499)
Q Consensus       417 ~~--Ls~~q~~lL~~l~~~~  434 (499)
                      +.  |+++|+++|++|+...
T Consensus        80 ~~~~ls~~q~~~l~~l~~~~   99 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPPR   99 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCCC
T ss_pred             CCCCCCHHHHHHHHHHcccc
Confidence            99  9999999999998643

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.90  E-value=1.8e-24  Score=184.99  Aligned_cols=98  Identities=48%  Similarity=0.794  Sum_probs=70.5

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccccCCC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG  153 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~~~g~  153 (499)
                      |..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.||++|++++..+.+++
T Consensus         1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~   80 (103)
T 1bq0_A            1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGG   80 (103)
T ss_dssp             CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC---
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCC
Confidence            45799999999999999999999999999999999984 77899999999999999999999999999999887542111


Q ss_pred             CCCC--ccCCCCccccccCCCC
Q 010831          154 SSAY--TTNPFDLFETFFGPSM  173 (499)
Q Consensus       154 ~~~~--~~~~~diF~~fFg~~~  173 (499)
                       +++  ..++.++|++||+..|
T Consensus        81 -~~~~~~~~~~~~f~~~f~~~f  101 (103)
T 1bq0_A           81 -GGFGGGADFSDIFGDVFGDIF  101 (103)
T ss_dssp             ----------------------
T ss_pred             -CCCCCCCCHHHHHHHHHHhhc
Confidence             111  1245677888887543

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=2.6e-23  Score=178.15  Aligned_cols=103  Identities=34%  Similarity=0.697  Sum_probs=95.5

Q ss_pred             CcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCC
Q 010831          195 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  274 (499)
Q Consensus       195 g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~  274 (499)
                      |.|++++|.|+|+|||+|++++|.+++.+.|+.|+|+|.++++.+.+|+.|+|+|++...+    |+|++.++|+.|+|+
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~   76 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR   76 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence            3578899999999999999999999999999999999999999999999999999886653    678888999999999


Q ss_pred             CEEEceeeeeccCceEEEeeeeEEEEe
Q 010831          275 GEVISEYCRKCSGEGRIRLKKNIKVKV  301 (499)
Q Consensus       275 G~~i~~~C~~C~G~G~v~~~k~l~V~I  301 (499)
                      |++|.++|..|+|.|+++++++|+|+|
T Consensus        77 G~~i~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           77 GSIIISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred             ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence            999999999999999999999988875

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.87  E-value=1.1e-22  Score=164.59  Aligned_cols=74  Identities=61%  Similarity=1.030  Sum_probs=70.2

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      |..|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||++|.+++.+
T Consensus         1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            56799999999999999999999999999999999988889999999999999999999999999999887763

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=7.3e-22  Score=164.03  Aligned_cols=75  Identities=55%  Similarity=0.890  Sum_probs=70.2

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST  149 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~  149 (499)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++.+.+.++|++|++||++|+||.+|+.||++|+.++.++
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            357899999999999999999999999999999999888889999999999999999999999999998877643

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=1.9e-21  Score=161.56  Aligned_cols=74  Identities=50%  Similarity=0.864  Sum_probs=69.1

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG  145 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~  145 (499)
                      ......|||+||||+++|+.+|||+|||+|+++||||+++.+.++++|++|++||++|+||.+|+.||++|+..
T Consensus        12 ~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             hccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            44557899999999999999999999999999999999988889999999999999999999999999998753

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=3.6e-21  Score=156.43  Aligned_cols=71  Identities=61%  Similarity=1.022  Sum_probs=66.4

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG  145 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~  145 (499)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++ .+.+.++|++|++||++|+||.+|+.||++|..+
T Consensus         5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            3578999999999999999999999999999999997 4678999999999999999999999999998754

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=2.5e-21  Score=157.01  Aligned_cols=70  Identities=56%  Similarity=0.962  Sum_probs=66.8

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG  145 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~  145 (499)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+++.++|++|++||++|+||.+|+.||++|+.+
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            5689999999999999999999999999999999988889999999999999999999999999999764

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4e-21  Score=160.79  Aligned_cols=74  Identities=51%  Similarity=0.783  Sum_probs=68.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST  149 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~  149 (499)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  +.++++|++|++||++|+||.+|+.||++|.+++..+
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   83 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG   83 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence            4689999999999999999999999999999999975  3678999999999999999999999999998877643

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=4.9e-21  Score=156.76  Aligned_cols=72  Identities=53%  Similarity=0.858  Sum_probs=66.3

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|+.++.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~   81 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS   81 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence            46899999999999999999999999999999999753  5788999999999999999999999999976643

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.82  E-value=7e-21  Score=152.50  Aligned_cols=70  Identities=54%  Similarity=0.874  Sum_probs=62.4

Q ss_pred             cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccccc
Q 010831           73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEA  144 (499)
Q Consensus        73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~  144 (499)
                      |....|||+||||+++|+.+|||+|||+|+++||||++++  +.++|++|++||++|+||.+|+.||++|++
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            4456799999999999999999999999999999999963  468999999999999999999999999863

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.82  E-value=5.8e-21  Score=162.04  Aligned_cols=73  Identities=52%  Similarity=0.870  Sum_probs=64.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--GATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      +.|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|.+++.+
T Consensus         1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            36899999999999999999999999999999999753  47899999999999999999999999999887764

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.82  E-value=4.6e-21  Score=160.50  Aligned_cols=75  Identities=49%  Similarity=0.798  Sum_probs=68.1

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      .+.+..|||+||||+++|+.+|||+|||+|+++||||+++  ...++|++|++||++|+||.+|+.||++|++++..
T Consensus         3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   77 (92)
T 2o37_A            3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS   77 (92)
T ss_dssp             -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred             ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence            3456789999999999999999999999999999999985  34679999999999999999999999999888764

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=9.4e-21  Score=164.34  Aligned_cols=75  Identities=31%  Similarity=0.550  Sum_probs=69.3

Q ss_pred             cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||++|.+++.
T Consensus        16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            344689999999999999999999999999999999998 578899999999999999999999999999987653

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.80  E-value=2.6e-20  Score=157.98  Aligned_cols=69  Identities=41%  Similarity=0.583  Sum_probs=63.9

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||++.
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l   83 (99)
T 2yua_A           14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL   83 (99)
T ss_dssp             SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred             CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence            34679999999999999999999999999999999997 4678999999999999999999999999843

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.80  E-value=2.8e-20  Score=160.57  Aligned_cols=75  Identities=45%  Similarity=0.803  Sum_probs=68.9

Q ss_pred             cccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           73 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        73 ~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .....|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            3456799999999999999999999999999999999974 67889999999999999999999999999987654

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.78  E-value=5.3e-20  Score=154.41  Aligned_cols=70  Identities=31%  Similarity=0.563  Sum_probs=64.1

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-------PGATEKFKEISAAYEVLSDDKKRAMYDQYGE  143 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-------~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~  143 (499)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++.       +.+.++|++|++||+||+||.+|+.||.+..
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            346799999999999999999999999999999999863       4578999999999999999999999999753

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.76  E-value=2.1e-19  Score=171.15  Aligned_cols=73  Identities=47%  Similarity=0.835  Sum_probs=68.6

Q ss_pred             cCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831           77 GDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST  149 (499)
Q Consensus        77 ~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~  149 (499)
                      .|||+||||+++|+.+|||+|||+|+++||||+++ ++++.++|++|++||++|+||.+|+.||++|+.++...
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~   75 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   75 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence            58999999999999999999999999999999996 57789999999999999999999999999999887643

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.76  E-value=2.6e-19  Score=154.42  Aligned_cols=72  Identities=38%  Similarity=0.631  Sum_probs=66.3

Q ss_pred             ccccCcCcchhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831           72 VVCASGDYYATLGVPKSA-SGKEIKAAYRKLARQYHPDVNKE----PGATEKFKEISAAYEVLSDDKKRAMYDQYGE  143 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~a-s~~eIk~ayrkla~~~HPD~~~~----~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~  143 (499)
                      ......|||+||||+++| +.+|||+|||+|+++||||+++.    +.+.++|++|++||++|+||.+|+.||+++.
T Consensus        10 ~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           10 LYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             STTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             HHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            444578999999999999 99999999999999999999875    5678999999999999999999999999875

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=8.1e-19  Score=146.26  Aligned_cols=64  Identities=38%  Similarity=0.504  Sum_probs=60.6

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhh
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM  137 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~  137 (499)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++++++.++|++|++||++|+||.+|+.
T Consensus        24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            3468999999999999999999999999999999999988999999999999999999999875

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.71  E-value=1.2e-18  Score=151.37  Aligned_cols=65  Identities=31%  Similarity=0.510  Sum_probs=60.7

Q ss_pred             CcCcchhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831           76 SGDYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGE  143 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~--~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~  143 (499)
                      ..|||+||||+++|+.  +|||+|||+||++||||++++   .++|++|++||+||+||.+|+.||.||.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999999999  999999999999999999865   4799999999999999999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.71  E-value=6.2e-18  Score=154.71  Aligned_cols=69  Identities=32%  Similarity=0.549  Sum_probs=63.0

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-------hHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG-------ATEKFKEISAAYEVLSDDKKRAMYDQYGE  143 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~-------~~~~f~~i~~AY~vLsd~~kR~~YD~~G~  143 (499)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++...       +.++|++|++||++|+||.+|+.||.++.
T Consensus         8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            3579999999999999999999999999999999997542       56899999999999999999999998663

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.70  E-value=5.5e-18  Score=137.82  Aligned_cols=65  Identities=15%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             cCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831           77 GDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG  145 (499)
Q Consensus        77 ~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~  145 (499)
                      .++|+||||+++  |+.+|||+|||+|+++||||++.   +.++|++|++||++|+|+.+|.. |.||.++
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~   77 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLR-MNLGGTG   77 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence            589999999999  99999999999999999999984   46899999999999999999988 5577654

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.68  E-value=3.5e-18  Score=158.39  Aligned_cols=65  Identities=29%  Similarity=0.453  Sum_probs=58.1

Q ss_pred             CcCcchhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccc
Q 010831           76 SGDYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGE  143 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as--~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~  143 (499)
                      ..|||+||||+++|+  .+|||+|||+||+++|||++++   +++|++|++||++|+||.+|+.||+||.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            468999999999998  6999999999999999999865   3789999999999999999999999985

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.68  E-value=3.9e-17  Score=156.13  Aligned_cols=95  Identities=18%  Similarity=0.271  Sum_probs=70.0

Q ss_pred             ccccCCCCCCCCCC-CCCCccccccccccc-cCcCcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------h
Q 010831           46 ADSCPFGGSKLNSS-NARSSTYRFGRSVVC-ASGDYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEPG------A  115 (499)
Q Consensus        46 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~~------~  115 (499)
                      ...||.|+....+. ....-...+...+.. ...|||+||||+++  ++.++||+|||+|+++||||+++...      +
T Consensus        10 ~~~Cw~C~~~~~~~~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a   89 (207)
T 3bvo_A           10 YPRCWNCGGPWGPGREDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFS   89 (207)
T ss_dssp             -CBCSSSCCBCCSSCSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHH
T ss_pred             CCCCCCCCCCcccccccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence            45788887542111 111111122333332 36799999999986  79999999999999999999987532      4


Q ss_pred             HHHHHHHHHHHhhcchhhhhhhccc
Q 010831          116 TEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus       116 ~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      .++|++|++||+||+||.+|+.||.
T Consensus        90 ~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           90 EKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            5789999999999999999999996

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.66  E-value=2.4e-17  Score=136.71  Aligned_cols=64  Identities=22%  Similarity=0.201  Sum_probs=57.7

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMY  138 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~Y  138 (499)
                      ...++|+||||+++|+.+|||+|||+|+++||||++++  +.++++|++|++||++|+|...|..+
T Consensus        14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~   79 (88)
T 1iur_A           14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN   79 (88)
T ss_dssp             CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred             cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            35789999999999999999999999999999999986  34789999999999999999887443

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.64  E-value=2.1e-17  Score=186.23  Aligned_cols=78  Identities=44%  Similarity=0.749  Sum_probs=40.9

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhcchhhhhhhcccccccCcccc
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST  149 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~-~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~~  149 (499)
                      ......|||+||||+++|+.+|||+|||+||++||||+++ ++.+.++|++|++||++|+||.+|+.||+||++++..+
T Consensus        16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            4456789999999999999999999999999999999996 57788999999999999999999999999999888654

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.64  E-value=8.1e-17  Score=150.11  Aligned_cols=63  Identities=21%  Similarity=0.412  Sum_probs=59.0

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMY  138 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~Y  138 (499)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++...    ++++|++|++||+||+||.+|+.|
T Consensus       116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            469999999999999999999999999999999997543    788999999999999999999988

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.62  E-value=1.5e-16  Score=132.59  Aligned_cols=58  Identities=21%  Similarity=0.324  Sum_probs=52.0

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcch
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSD  131 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd  131 (499)
                      +...++|++|||++.|+.+|||+|||++|++||||+|++..    ++++|++|++||+||.+
T Consensus        30 ~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            33358999999999999999999999999999999997532    78899999999999986

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.61  E-value=2e-16  Score=147.05  Aligned_cols=65  Identities=28%  Similarity=0.455  Sum_probs=59.7

Q ss_pred             CcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           78 DYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPG------ATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        78 d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~------~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      |||+||||++++  +.++||+|||+|+++||||+++...      +.++|+.|++||+||+||.+|+.||...
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            799999999999  9999999999999999999987532      4579999999999999999999999864

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.59  E-value=1.8e-16  Score=135.81  Aligned_cols=61  Identities=13%  Similarity=0.262  Sum_probs=53.8

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------chHHHHHHHHHHHhhcchhh
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEP--------GATEKFKEISAAYEVLSDDK  133 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~--------~~~~~f~~i~~AY~vLsd~~  133 (499)
                      ..+...|||+|||++. |+.+|||+|||+||++||||+|+++        .++++|++|++||++|+|+.
T Consensus        36 ~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           36 ILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            4455689999999996 9999999999999999999998642        25789999999999999975

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.58  E-value=1.8e-15  Score=122.59  Aligned_cols=78  Identities=44%  Similarity=0.981  Sum_probs=70.3

Q ss_pred             ceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEE
Q 010831          212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  291 (499)
Q Consensus       212 G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v  291 (499)
                      |++++|.|++.+.|+.|+|+|..++....+|+.|+|+|+++..+    |+|++..+|+.|+|.|+++.++|..|+|.|++
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~   76 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence            56788999999999999999999888889999999999987643    77887889999999999999999999999988


Q ss_pred             Ee
Q 010831          292 RL  293 (499)
Q Consensus       292 ~~  293 (499)
                      ++
T Consensus        77 ~~   78 (79)
T 1exk_A           77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ee
Confidence            54

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.58  E-value=6.6e-16  Score=122.92  Aligned_cols=57  Identities=21%  Similarity=0.281  Sum_probs=52.0

Q ss_pred             cCcchhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhh
Q 010831           77 GDYYATLGVPK-SASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRA  136 (499)
Q Consensus        77 ~d~Y~vLgv~~-~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~  136 (499)
                      .++|+||||++ +|+.+|||+|||+|+++||||++   ++.++|++|++||++|+|+..|+
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhcC
Confidence            58999999999 79999999999999999999997   44679999999999999987663

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.57  E-value=6.2e-16  Score=144.81  Aligned_cols=66  Identities=24%  Similarity=0.477  Sum_probs=59.6

Q ss_pred             cCcCcchhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           75 ASGDYYATL------GVPK-SASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        75 ~~~d~Y~vL------gv~~-~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      ...|||+||      |+++ +|+.++||+|||+|+++||||+++.  +.++|++|++||+||+||.+|+.||...
T Consensus         9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            356999999      4665 8999999999999999999999975  6789999999999999999999999843

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.31  E-value=1.7e-12  Score=127.51  Aligned_cols=116  Identities=22%  Similarity=0.464  Sum_probs=79.4

Q ss_pred             eecccccCcccccC---------cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeee----------
Q 010831          223 ETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR----------  283 (499)
Q Consensus       223 ~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~----------  283 (499)
                      ..|+.|+|+|....         ....+|+.|+|+|+++..          ..+|+.|+|.|.+....-.          
T Consensus        55 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  124 (248)
T 1nlt_A           55 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKVENERKILEVHVEPGMKD  124 (248)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCEEEEEEEEEEEECTTCCT
T ss_pred             ccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc----------CCCCcccCCCceEeeeEEEEEEECCCccC
Confidence            78999999996421         235689999999986521          2689999999987543211          


Q ss_pred             ----eccCceE---------E---------------------------------------E-eeeeEEEEeCCC--CCCC
Q 010831          284 ----KCSGEGR---------I---------------------------------------R-LKKNIKVKVPPG--VSTG  308 (499)
Q Consensus       284 ----~C~G~G~---------v---------------------------------------~-~~k~l~V~IP~G--v~~G  308 (499)
                          .-.|+|.         +                                       . ..+.++|+||+|  +++|
T Consensus       125 G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g  204 (248)
T 1nlt_A          125 GQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPG  204 (248)
T ss_dssp             TCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTT
T ss_pred             CCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCC
Confidence                2233331         1                                       1 234699999999  9999


Q ss_pred             CEEEEcccCCCCCCCCCCccEEEEEEEEeccc--cccCCcce
Q 010831          309 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDL  348 (499)
Q Consensus       309 ~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~--f~R~G~DL  348 (499)
                      ++++|+|+|.+...+...|||||+|+|..+..  +..+..+|
T Consensus       205 ~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          205 MRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             CEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred             eEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            99999999998654435799999999998876  66555544

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.97  E-value=2.8e-10  Score=116.53  Aligned_cols=65  Identities=49%  Similarity=0.714  Sum_probs=55.9

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      ..++|++||+.+.++.++|+++|+++++++|||+.+.+.    ++++|++|++||++|+||++|+.||+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            348999999999999999999999999999999987643    78899999999999999999999997

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=98.97  E-value=3.8e-10  Score=96.97  Aligned_cols=52  Identities=27%  Similarity=0.524  Sum_probs=43.6

Q ss_pred             eEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccccccCCcceE
Q 010831          296 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  349 (499)
Q Consensus       296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~f~R~G~DL~  349 (499)
                      .++|+||+|+++|++++|+|+|.+. .+ ..|||||+|+|..+..+..+..+++
T Consensus        39 ~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l   90 (109)
T 3i38_A           39 SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELW   90 (109)
T ss_dssp             CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred             CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence            4789999999999999999999986 33 7899999999998887765554443

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.91  E-value=9.7e-10  Score=96.18  Aligned_cols=54  Identities=20%  Similarity=0.356  Sum_probs=41.7

Q ss_pred             eeEEEEeCCC--CCCCCEEEEcccCCCCCCCCCCccEEEEEEEEeccc--cccCCcce
Q 010831          295 KNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDL  348 (499)
Q Consensus       295 k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~~--f~R~G~DL  348 (499)
                      +.++|+||+|  +++|++++|+|+|.+..++...|||||+|+|..+..  +..+..++
T Consensus        34 ~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~   91 (121)
T 1xao_A           34 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK   91 (121)
T ss_dssp             CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred             CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence            3578999999  999999999999998665446799999999998876  66655544

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.72  E-value=9.5e-09  Score=79.87  Aligned_cols=52  Identities=15%  Similarity=0.121  Sum_probs=47.3

Q ss_pred             CcchhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchh
Q 010831           78 DYYATLGVPKS---ASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDD  132 (499)
Q Consensus        78 d~Y~vLgv~~~---as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~  132 (499)
                      +-|.||||+++   ++.++|+++||+|....|||+.   +......+|++|+++|...
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence            45899999999   9999999999999999999997   6678889999999999754

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.57  E-value=5e-08  Score=91.00  Aligned_cols=51  Identities=20%  Similarity=0.203  Sum_probs=42.3

Q ss_pred             eEEEEeCCCCCCCCEEEEcccCCCCCCC-CCCccEEEEEEEEeccccccCCc
Q 010831          296 NIKVKVPPGVSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDGI  346 (499)
Q Consensus       296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~g-g~~GDL~V~i~v~~h~~f~R~G~  346 (499)
                      .++|+||+|+++|++++|+|+|.+...+ +..|||||+|+|..+..+..+..
T Consensus       121 ~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~  172 (180)
T 2q2g_A          121 NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQK  172 (180)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHH
T ss_pred             EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHH
Confidence            5788999999999999999999986533 46799999999998876654443

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.56  E-value=5.1e-08  Score=91.07  Aligned_cols=51  Identities=25%  Similarity=0.262  Sum_probs=42.6

Q ss_pred             eEEEEeCCCCCCCCEEEEcccCCCCCC-CCCCccEEEEEEEEeccccccCCc
Q 010831          296 NIKVKVPPGVSTGSILRVVGEGDAGPR-GGPPGDLYVYLDVEEIPGIQRDGI  346 (499)
Q Consensus       296 ~l~V~IP~Gv~~G~~Irl~G~G~~~~~-gg~~GDL~V~i~v~~h~~f~R~G~  346 (499)
                      .++|+||+|+++|++++|+|+|.+... .+..|||||+|+|..+..++.+..
T Consensus       121 ~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~  172 (181)
T 3agx_A          121 TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSR  172 (181)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHH
T ss_pred             EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHH
Confidence            578899999999999999999998654 356799999999998876664443

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.48  E-value=1.3e-07  Score=96.17  Aligned_cols=74  Identities=18%  Similarity=0.294  Sum_probs=53.6

Q ss_pred             cCCcceEEEeeeCHHhhhCCCEEEEecc------CC--------eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEE
Q 010831          343 RDGIDLFSTISISYLDAIMGTVVKVKTV------EG--------ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL  408 (499)
Q Consensus       343 R~G~DL~~~~~Isl~eAllG~~~~I~tl------dG--------~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~  408 (499)
                      +.|.||..++.|+|.||+.|.+..|.--      .|        .++|+||+|++.|++|+|+|+|.|..++ +.+||||
T Consensus       138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~  216 (329)
T 3lz8_A          138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW  216 (329)
T ss_dssp             CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred             CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence            4566777777777777777766555321      22        3589999999999999999999987543 3589999


Q ss_pred             EEEEEEcCC
Q 010831          409 FTVKVTIPN  417 (499)
Q Consensus       409 V~~~V~~P~  417 (499)
                      |+|+|.-..
T Consensus       217 v~I~v~~h~  225 (329)
T 3lz8_A          217 LVIHIAPHP  225 (329)
T ss_dssp             EEECCCCCS
T ss_pred             EEEEEecCC
Confidence            998776543

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.41  E-value=4.2e-07  Score=83.96  Aligned_cols=72  Identities=17%  Similarity=0.244  Sum_probs=59.2

Q ss_pred             cceEEEeeeCHHhhhCCCEEEEecc----CC-----eEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010831          346 IDLFSTISISYLDAIMGTVVKVKTV----EG-----ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP  416 (499)
Q Consensus       346 ~DL~~~~~Isl~eAllG~~~~I~tl----dG-----~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P  416 (499)
                      .|+.+++.|||.||+.|++.+|.--    .|     .++|+||+|+..|++++++|+|-|...+ +..|||||+|+|.-.
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~~h   79 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSH   79 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEECCC
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEccC
Confidence            3899999999999999999888632    23     3689999999999999999999865433 357999999999765


Q ss_pred             CC
Q 010831          417 NR  418 (499)
Q Consensus       417 ~~  418 (499)
                      ..
T Consensus        80 ~~   81 (170)
T 1c3g_A           80 PN   81 (170)
T ss_dssp             SS
T ss_pred             Cc
Confidence            44

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=98.12  E-value=7.2e-08  Score=105.84  Aligned_cols=78  Identities=19%  Similarity=0.356  Sum_probs=60.3

Q ss_pred             EEeeeecccccccceeeeeecceeeecccccCcccccCc---ceeeccCCCCcceEEEE--------eeCCccce-eeee
Q 010831          199 RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---KMRICSTCGGRGQVMRT--------DQTPFGLF-SQVS  266 (499)
Q Consensus       199 ~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~---~~~~C~~C~G~G~v~~~--------~~~~~g~~-~~~~  266 (499)
                      .+++.|+|+|+++|.+++++|.+.+.|..|+|+|++++.   .+.+|+.|+|+......        ...=.|.| ++..
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            468899999999999999999999999999999999998   68999999999421110        01111333 2346


Q ss_pred             eCCCCCCCCE
Q 010831          267 VCPSCGGEGE  276 (499)
Q Consensus       267 ~C~~C~G~G~  276 (499)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            8999998775

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.72  E-value=7.1e-06  Score=60.96  Aligned_cols=30  Identities=40%  Similarity=0.858  Sum_probs=26.6

Q ss_pred             eeeCCCCCCCCEEEceeeeeccCceEEEee
Q 010831          265 VSVCPSCGGEGEVISEYCRKCSGEGRIRLK  294 (499)
Q Consensus       265 ~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~  294 (499)
                      .++|+.|+|+|++|.++|+.|+|.|++.+.
T Consensus         9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A            9 ETTCPNCNGSGREEPEPCPKCLGKGVILTA   38 (53)
T ss_dssp             EEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred             eccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence            478999999999999999999999988654

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.64  E-value=2.1e-05  Score=62.96  Aligned_cols=47  Identities=32%  Similarity=0.791  Sum_probs=37.5

Q ss_pred             cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc--------eeeeeccCceEEE
Q 010831          237 SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--------EYCRKCSGEGRIR  292 (499)
Q Consensus       237 ~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~--------~~C~~C~G~G~v~  292 (499)
                      .+..+|+.|+|+|...         .....+|+.|+|.|.++.        .+|+.|+|.|.+.
T Consensus         9 ~~~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~   63 (79)
T 1exk_A            9 PTLEECDVCHGSGAKP---------GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLI   63 (79)
T ss_dssp             CCEEECGGGTTTSBCS---------SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEEC
T ss_pred             ccceECCCCcccccCC---------CccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEEC
Confidence            4578999999999631         122368999999999874        5999999999764

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.53  E-value=3.7e-05  Score=65.01  Aligned_cols=47  Identities=34%  Similarity=0.887  Sum_probs=37.2

Q ss_pred             eeecccccCccccc---C--cceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEce
Q 010831          222 LETCEVCTGTGAKM---G--SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISE  280 (499)
Q Consensus       222 ~~~C~~C~GsG~~~---g--~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~  280 (499)
                      ...|+.|+|+|...   +  ....+|+.|+|+|+++.            .+|+.|+|.|.+...
T Consensus        45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~   96 (104)
T 2ctt_A           45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQK   96 (104)
T ss_dssp             CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECCC
T ss_pred             CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEEE
Confidence            46899999999642   1  23578999999998753            689999999998654

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.50  E-value=1.4e-05  Score=59.40  Aligned_cols=39  Identities=23%  Similarity=0.618  Sum_probs=27.7

Q ss_pred             eeecccccCcccccCcceeeccCCCCcceEEEEe-eCCcccee
Q 010831          222 LETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD-QTPFGLFS  263 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~-~~~~g~~~  263 (499)
                      ...|+.|+|+|....   .+|+.|+|.|+++..+ ++++|+++
T Consensus         9 ~~~C~~C~GsG~~~~---~~C~~C~G~G~v~~~qG~~~~g~~~   48 (53)
T 2bx9_A            9 EVACPKCERAGEIEG---TPCPACSGKGVILTAQGYTLLDFIQ   48 (53)
T ss_dssp             EEECTTTTTSSEETT---EECTTTTTSSEEECHHHHHHHHHHH
T ss_pred             cccCCCCcceeccCC---CCCccCCCCccEEEEecccHHHHHH
Confidence            457888888887753   5788888888877655 55555543

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.10  E-value=0.00021  Score=52.97  Aligned_cols=27  Identities=41%  Similarity=0.912  Sum_probs=15.7

Q ss_pred             eeCCCCCCCCEEEceeeeeccCceEEE
Q 010831          266 SVCPSCGGEGEVISEYCRKCSGEGRIR  292 (499)
Q Consensus       266 ~~C~~C~G~G~~i~~~C~~C~G~G~v~  292 (499)
                      .+|+.|+|.|.++..+|+.|+|.|++.
T Consensus        10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEIEGTPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred             ccCCCCcceeccCCCCCccCCCCccEE
Confidence            455555555555555666666666554

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=96.70  E-value=0.0007  Score=50.15  Aligned_cols=28  Identities=32%  Similarity=0.825  Sum_probs=15.7

Q ss_pred             eeecccccCcccccCcceeeccCCCCcceEE
Q 010831          222 LETCEVCTGTGAKMGSKMRICSTCGGRGQVM  252 (499)
Q Consensus       222 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~  252 (499)
                      ..+|+.|+|+|....   ..|+.|+|+|.+.
T Consensus         9 ~~~C~~C~GsG~~i~---~~C~~C~G~G~v~   36 (53)
T 3lcz_A            9 ETTCPNCNGSGREEP---EPCPKCLGKGVIL   36 (53)
T ss_dssp             EEECTTTTTSCEETT---EECTTTTTSSEEE
T ss_pred             eccCcCCcccccCCC---CcCCCCCCcEEEE
Confidence            345666666665442   4566666666543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=89.89  E-value=0.14  Score=56.25  Aligned_cols=48  Identities=23%  Similarity=0.333  Sum_probs=39.0

Q ss_pred             ccCcCcchhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhh
Q 010831           74 CASGDYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEV  128 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~--~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~v  128 (499)
                      ....|||.+||++.+...  .+|++|||+||+..+++       .+++..|..|+.|
T Consensus       626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV  675 (681)
T ss_dssp             SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence            346689999999777655  77999999999976555       4789999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	499
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	8e-25
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	5e-24
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-20
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	4e-20
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	1e-19
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-19
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-18
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-18
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-17
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	2e-17
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-17
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	2e-16
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	1e-13
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	0.002
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	4e-12
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	4e-04
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	6e-08
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-06
d1qo8a1	101	a.138.1.3 (A:2-102) Flavocytochrome c3 (respirator	4e-05

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 95.5 bits (237), Expect = 8e-25
 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 1/74 (1%)

Query: 75  ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDK 133
           A  DYY  LGV K+A  +EI+ AY++LA +YHPD N+ +  A  KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 134 KRAMYDQYGEAGVK 147
           KRA YDQYG A  +
Sbjct: 61  KRAAYDQYGHAAFE 74

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 5e-24
 Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 3/76 (3%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAM 137
           DYY TLG+ + AS +EIK AYR+ A +YHPD NKEPGA EKFKEI+ AY+VLSD +KR +
Sbjct: 4   DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63

Query: 138 YDQYGEAGVKSTVGGG 153
           +D+YGE G+K   G G
Sbjct: 64  FDRYGEEGLK---GSG 76

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.6 bits (206), Expect = 3e-20
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVN-------KEPGATEKFKEISAAYEVLS 130
           D+Y+ LG   SA+  ++K  Y+KL   YHPD               +KF EI  A+++L 
Sbjct: 17  DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 131 DDKKRAMYDQYG 142
           +++ +  YD   
Sbjct: 77  NEETKKKYDLQR 88

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 82.4 bits (203), Expect = 4e-20
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 78  DYYATLGVPKSAS--GKEIKAAYRKLARQYHPDVNKEPGATEK------FKEISAAYEVL 129
           DY+   G+P       + +   ++ L RQYHPD        E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 130 SDDKKRAMYD 139
                RA Y 
Sbjct: 62  RHPLMRAEYL 71

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 80.9 bits (199), Expect = 1e-19
 Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 271
           G  KE  +  LE C+VC G+GAK G++ + C TC G GQV        G F+    CP C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM----RQGFFAVQQTCPHC 56

Query: 272 GGEGEVISEYCRKCSGEGRIR 292
            G G +I + C KC G GR+ 
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 2e-19
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 78  DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKR 135
           +  + +         E K   R+L  ++HPD N E    A E FK +      L   +K+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 136 AMYDQYGEAGVKST 149
           A  DQ  +   + T
Sbjct: 74  AFLDQNADRASRRT 87

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 78.4 bits (193), Expect = 2e-18
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 72  VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGA----TEKFKEISAAYE 127
           V+ A    +  +G+    + +++K  YRK     HPD              F E++ A+ 
Sbjct: 28  VLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWS 87

Query: 128 VLSDDKKRAMY 138
              +  ++ +Y
Sbjct: 88  EFENQGQKPLY 98

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 77.3 bits (190), Expect = 2e-18
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 78  DYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
                L +P+   G    ++ AY++ +   HPD     G+    +E+++ +     +   
Sbjct: 12  RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYN 68

Query: 136 AMYDQYG 142
              +  G
Sbjct: 69  LRMNLGG 75

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 76.4 bits (187), Expect = 1e-17
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 78  DYYATLGVPKSASG--KEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKR 135
                LG+ +SA G    ++ AY K  +++HPD   +    EK K+++  Y+ + D  K 
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKY 65

Query: 136 AMYDQYGEAGVKSTVGGGSSAYTTNPF------DLF--ETFFG 170
           A    +G     + +    +      +      +LF  E    
Sbjct: 66  AHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPS 108

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.7 bits (183), Expect = 2e-17
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 224 TCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY-- 281
            C+ C G G K G+  + C++C G+G    T Q    +    + C  C G G++I     
Sbjct: 4   LCKECEGRGGKKGAVKK-CTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDR 62

Query: 282 CRKCSGEGRIR 292
           C+ C+G+    
Sbjct: 63  CKSCNGKKVEN 73

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.2 bits (182), Expect = 5e-17
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 342 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS-ELQVPPGTQPGDVLVLAKKGAPKLNK 400
           +RDG DL  T+ +S+ ++++G    ++T++G +  L      QP        +G P    
Sbjct: 3   KRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKN 62

Query: 401 PSIRGDHLFTVKVTIPNRISAKERELLE 428
           PS RG+ +   KV  P  ++  ++  ++
Sbjct: 63  PSQRGNLIVKYKVDYPISLNDAQKRAID 90

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 3/73 (4%)

Query: 223 ETCEVCTGTG---AKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS 279
             CE C   G   A    +   C +C G+   M     P       + C +         
Sbjct: 12  GGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQK 71

Query: 280 EYCRKCSGEGRIR 292
             C  C  +GR  
Sbjct: 72  PTCESCHDDGRTS 84

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.2 bits (156), Expect = 1e-13
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 271 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 330
             G+ +      +   G      K  I +++ PG   G+ +    +GD  P+ G    L 
Sbjct: 15  FVGKKKSFKIGRKGPHGASE---KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 331 VYLDVEEIP 339
             +  +  P
Sbjct: 72  FVIQEKSHP 80

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 10/76 (13%)

Query: 347 DLFSTISISYLDAIMGTVVKVK---------TVEGISELQVPPGTQPGDVLVLAKKGAPK 397
            +   + +S  D  +G     K         + +   ++Q+ PG + G  +    +G   
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYN 61

Query: 398 LNKPSIRGDHLFTVKV 413
                 R    F ++ 
Sbjct: 62  PQT-GRRKTLQFVIQE 76

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.6 bits (144), Expect = 4e-12
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 342 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGI---SELQVPPGTQPGDVLVLAKKGAPKL 398
           +RDG DL     I  L AI G    ++ V G      +       PG   V+  KG P  
Sbjct: 3   KRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIP 62

Query: 399 NKPSIRGDHLFTVKVTIP 416
                 G+ +    +  P
Sbjct: 63  KYGG-YGNLIIKFTIKDP 79

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 10/66 (15%)

Query: 271 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 330
            GGE  +                   + +     ++ G    + G+G   P+ G  G+L 
Sbjct: 22  AGGEFALEHVSGDWL----------KVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71

Query: 331 VYLDVE 336
           +   ++
Sbjct: 72  IKFTIK 77

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (112), Expect = 6e-08
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 343 RDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPS 402
           + G D+   IS S  +   G   K+     I E+ V PG + G  +V   +     +   
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDV-- 59

Query: 403 IRGDHLFTVKV 413
           I GD +F V  
Sbjct: 60  IPGDVVFIVSE 70

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 295 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEE 337
           K ++V V PG+  G  +   GE D  P    PGD+   +    
Sbjct: 31  KILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERP 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	499
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.91
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.88
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.82
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.79
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.69
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.66
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.65
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.63
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.62
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.62
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.6
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.49
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.35
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.84
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.82
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.66
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	97.61
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.59
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.2
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	81.27

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=9.6e-26  Score=186.32  Aligned_cols=89  Identities=25%  Similarity=0.480  Sum_probs=84.7

Q ss_pred             ccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcCCC
Q 010831          340 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR  418 (499)
Q Consensus       340 ~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P~~  418 (499)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ +.|+||+++|+|++++|+|+|||..++++.||||||+|+|++|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            4999999999999999999999999999999996 689999999999999999999999877778999999999999999


Q ss_pred             CCHHHHHHHH
Q 010831          419 ISAKERELLE  428 (499)
Q Consensus       419 Ls~~q~~lL~  428 (499)
                      ||++|+++||
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999985

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.2e-24  Score=169.88  Aligned_cols=74  Identities=61%  Similarity=1.030  Sum_probs=71.0

Q ss_pred             cCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccCccc
Q 010831           75 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS  148 (499)
Q Consensus        75 ~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~~  148 (499)
                      |.+|||+||||+++|+.+|||+||++|++++|||++.++.+.++|+.|++||+||+||.+|+.||+||++++++
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            67899999999999999999999999999999999998899999999999999999999999999999998864

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=9.4e-24  Score=168.34  Aligned_cols=72  Identities=56%  Similarity=0.916  Sum_probs=67.1

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhcchhhhhhhcccccccCcc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVK  147 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~~~  147 (499)
                      .+|||+||||+++||.+|||+|||+|+++||||+++. +.++++|++|++||+||+||.+|+.||+||+.++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            5799999999999999999999999999999999974 56788999999999999999999999999987653

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=4.7e-21  Score=154.42  Aligned_cols=77  Identities=29%  Similarity=0.428  Sum_probs=71.5

Q ss_pred             ccccCCcceEEEeeeCHHhhhCCCEEEEeccCCe-EeEEeCCC--CCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEEcC
Q 010831          340 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP  416 (499)
Q Consensus       340 ~f~R~G~DL~~~~~Isl~eAllG~~~~I~tldG~-~~l~ip~g--tq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~~P  416 (499)
                      .|+|+|+||+++++|++.||++|++++|+|+||. ++|+||++  +++|++++|+|+|||..++ +.+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSS-CSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCc-CCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999996 57788876  9999999999999999875 479999999999999


Q ss_pred             C
Q 010831          417 N  417 (499)
Q Consensus       417 ~  417 (499)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=1.4e-20  Score=156.05  Aligned_cols=69  Identities=32%  Similarity=0.570  Sum_probs=62.6

Q ss_pred             ccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           74 CASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-------PGATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        74 ~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~-------~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      .+.+|||+||||+++|+.+|||+||++|+++||||+++.       +.++++|++|++||+||+||.+|+.||+..
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            346799999999999999999999999999999999864       246788999999999999999999999864

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=1.1e-20  Score=162.30  Aligned_cols=67  Identities=28%  Similarity=0.427  Sum_probs=61.3

Q ss_pred             CcCcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhcccccccC
Q 010831           76 SGDYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAG  145 (499)
Q Consensus        76 ~~d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~~  145 (499)
                      ..|||+||||+++|  +.++||+|||+||++||||+++++   ++|++|++||+||+||.+|+.||.++...
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~---e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT---TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH---HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            46899999999999  788999999999999999999753   58999999999999999999999988654

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.69  E-value=4.5e-18  Score=135.97  Aligned_cols=64  Identities=14%  Similarity=0.261  Sum_probs=58.7

Q ss_pred             CcCcchhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcchhhhhhhccccc
Q 010831           76 SGDYYATLGVPKSA--SGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYG  142 (499)
Q Consensus        76 ~~d~Y~vLgv~~~a--s~~eIk~ayrkla~~~HPD~~~~~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G  142 (499)
                      ..+||+||||++++  +.+|||+|||+++++||||++.   ..++|++|++||++|+|+.+|..||..+
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g---~~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC---CHHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            46899999999988  9999999999999999999984   4579999999999999999999999743

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=4.3e-17  Score=130.58  Aligned_cols=78  Identities=44%  Similarity=0.963  Sum_probs=71.0

Q ss_pred             ceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEE
Q 010831          212 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  291 (499)
Q Consensus       212 G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v  291 (499)
                      |++++|.|++.+.|+.|+|+|++++..+.+|+.|+|+|++..    .+|+|++.++|+.|+|+|++|.++|..|+|.|+|
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~----~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v   76 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM----RQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEE----EETTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEE----ecccceeeEECcccCcceeECCCCCCCCCCceEe
Confidence            678899999999999999999999999999999999998743    3477888899999999999999999999999998


Q ss_pred             Ee
Q 010831          292 RL  293 (499)
Q Consensus       292 ~~  293 (499)
                      ++
T Consensus        77 ~k   78 (79)
T d1exka_          77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.3e-17  Score=131.19  Aligned_cols=63  Identities=29%  Similarity=0.508  Sum_probs=56.0

Q ss_pred             CcchhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHhhcchhhhhhhccc
Q 010831           78 DYYATLGVPKS--ASGKEIKAAYRKLARQYHPDVNKEP------GATEKFKEISAAYEVLSDDKKRAMYDQ  140 (499)
Q Consensus        78 d~Y~vLgv~~~--as~~eIk~ayrkla~~~HPD~~~~~------~~~~~f~~i~~AY~vLsd~~kR~~YD~  140 (499)
                      |||++|||++.  ++.+|||+|||+++++||||+....      .+.+.|+.|++||+||+||.+|+.|+.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            79999999985  4589999999999999999997532      256789999999999999999999975

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=2.6e-16  Score=126.23  Aligned_cols=80  Identities=20%  Similarity=0.405  Sum_probs=68.1

Q ss_pred             cceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCC
Q 010831          196 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  275 (499)
Q Consensus       196 ~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G  275 (499)
                      +++.++|.|||+|+|.|+++++.+.+.    .                 |+|.+                          
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~----~-----------------~~g~~--------------------------   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK----G-----------------PHGAS--------------------------   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE----E-----------------TTTEE--------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee----c-----------------ccCCC--------------------------
Confidence            478999999999999999999886532    1                 22221                          


Q ss_pred             EEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEecc
Q 010831          276 EVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  339 (499)
Q Consensus       276 ~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~  339 (499)
                                       +.++++|+||||+++|++|+|+|+|++.++++.+|||+|+|++++||
T Consensus        34 -----------------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 -----------------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             -----------------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             -----------------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                             24679999999999999999999999988888999999999999997

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.62  E-value=6.1e-17  Score=134.82  Aligned_cols=67  Identities=22%  Similarity=0.420  Sum_probs=60.4

Q ss_pred             ccccCcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhcchhhhhhhc
Q 010831           72 VVCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPG----ATEKFKEISAAYEVLSDDKKRAMY  138 (499)
Q Consensus        72 ~~~~~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~~~----~~~~f~~i~~AY~vLsd~~kR~~Y  138 (499)
                      +.+...++|++|||+..++.+|||+|||+++++||||+++++.    +++.|+.|++||++|+||.+|+.|
T Consensus        28 vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          28 VLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             hcCCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            3455668899999999999999999999999999999987543    678999999999999999999998

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8.9e-17  Score=131.02  Aligned_cols=66  Identities=26%  Similarity=0.309  Sum_probs=58.3

Q ss_pred             CcCcchhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhcchhhhhhhccccccc
Q 010831           76 SGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE--PGATEKFKEISAAYEVLSDDKKRAMYDQYGEA  144 (499)
Q Consensus        76 ~~d~Y~vLgv~~~as~~eIk~ayrkla~~~HPD~~~~--~~~~~~f~~i~~AY~vLsd~~kR~~YD~~G~~  144 (499)
                      .+|+|+||+|+.+||.+|||+|||+|+++||||+|++  +.++++|++|++||++|++   ++.||++...
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~~   82 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNADR   82 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSSC
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccchH
Confidence            4699999999999999999999999999999999985  3578999999999999974   6777776543

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=1.2e-15  Score=120.45  Aligned_cols=73  Identities=26%  Similarity=0.476  Sum_probs=65.2

Q ss_pred             ccCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCC
Q 010831          193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  272 (499)
Q Consensus       193 ~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~  272 (499)
                      ++|+|++++|.|||+|||.|+++++.+.                                                    
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~----------------------------------------------------   29 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALN----------------------------------------------------   29 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEE----------------------------------------------------
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeec----------------------------------------------------
Confidence            5789999999999999999998876531                                                    


Q ss_pred             CCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCCCCCCccEEEEEEEEecc
Q 010831          273 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  339 (499)
Q Consensus       273 G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h~  339 (499)
                                           .++++|+||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+
T Consensus        30 ---------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 ---------------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             ---------------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             ---------------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                                 2578999999999999999999999976 67899999999999995

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=1.2e-14  Score=114.70  Aligned_cols=72  Identities=28%  Similarity=0.652  Sum_probs=63.9

Q ss_pred             eeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc--eeeeeccCceEEEe
Q 010831          221 HLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRL  293 (499)
Q Consensus       221 ~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~--~~C~~C~G~G~v~~  293 (499)
                      +.+.|+.|+|+|.+.++ ..+|+.|+|+|+++...+++++++++..+|+.|+|+|++|.  ++|..|+|.|.+++
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            46899999999998875 57899999999999999998887777799999999999874  69999999998764

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=5.8e-13  Score=104.76  Aligned_cols=70  Identities=27%  Similarity=0.384  Sum_probs=64.0

Q ss_pred             cCCcceEEEeeeCHHhhhCCCEEEEeccCCeEeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEE
Q 010831          343 RDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT  414 (499)
Q Consensus       343 R~G~DL~~~~~Isl~eAllG~~~~I~tldG~~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~  414 (499)
                      |.|.||+++++|||.||++|+++.|.+..+.+.|+||+|+++|++++++|+|.+..+  +.+|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPD--VIPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTT--CBCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecCccEEEEecccccCCeEEEecCCcCCCCC--CCCCCEEEEEEec
Confidence            689999999999999999999999998777789999999999999999999998754  3589999999874

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=8.6e-10  Score=89.49  Aligned_cols=82  Identities=22%  Similarity=0.328  Sum_probs=66.9

Q ss_pred             ccCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCC
Q 010831          193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  272 (499)
Q Consensus       193 ~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~  272 (499)
                      ++|.|+.+.+.|+|.||+.|++++|..-                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4689999999999999999998776421                                                    


Q ss_pred             CCCEEEceeeeeccCceEEEeeeeEEEEeCCCCCCCCEEEEcccCCCCCC-CCCCccEEEEEEEEeccccccCCc
Q 010831          273 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPR-GGPPGDLYVYLDVEEIPGIQRDGI  346 (499)
Q Consensus       273 G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~Gv~~G~~Irl~G~G~~~~~-gg~~GDL~V~i~v~~h~~f~R~G~  346 (499)
                                          ..++++|+||+|+++|++++++|+|.+... .+..|||||+|+|..+..++.+..
T Consensus        32 --------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~qk   86 (90)
T d1c3ga2          32 --------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQK   86 (90)
T ss_dssp             --------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHH
T ss_pred             --------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHHHH
Confidence                                025788999999999999999999997543 356799999999998776665443

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=2.5e-09  Score=84.71  Aligned_cols=74  Identities=26%  Similarity=0.447  Sum_probs=61.2

Q ss_pred             ccCcceEEeeeecccccccceeeeeecceeeecccccCcccccCcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCC
Q 010831          193 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  272 (499)
Q Consensus       193 ~~g~di~~~l~ltl~ea~~G~~k~i~v~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~  272 (499)
                      +.|.|+.++++|+|.||+.|+++++...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4589999999999999999988776521                                                    


Q ss_pred             CCCEEEceeeeeccCceEEEeeeeEEEEeCCC--CCCCCEEEEcccCCCCCCCCCCccEEEEEEEEec
Q 010831          273 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEI  338 (499)
Q Consensus       273 G~G~~i~~~C~~C~G~G~v~~~k~l~V~IP~G--v~~G~~Irl~G~G~~~~~gg~~GDL~V~i~v~~h  338 (499)
                                          ..+.++|+||++  +++|++++++|+|.+..+++..|||||+++|+-+
T Consensus        32 --------------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2          32 --------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             --------------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECC
T ss_pred             --------------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcC
Confidence                                024567777776  9999999999999988777788999999999754

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=4e-08  Score=77.57  Aligned_cols=68  Identities=18%  Similarity=0.285  Sum_probs=56.6

Q ss_pred             cceEEEeeeCHHhhhCCCEEEEe----ccCCe-----EeEEeCCCCCCCcEEEeccCCCCCCCCCCCCCcEEEEEEEE
Q 010831          346 IDLFSTISISYLDAIMGTVVKVK----TVEGI-----SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT  414 (499)
Q Consensus       346 ~DL~~~~~Isl~eAllG~~~~I~----tldG~-----~~l~ip~gtq~g~~~~l~G~GmP~~~~~~~rGDL~V~~~V~  414 (499)
                      +||..++.|+|.||..|++..|.    ..+|.     +.|.||||++.|++++++|+|....+. +.+|||+|+|++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCC-CCCCCEEEEEEeC
Confidence            47899999999999999977664    34552     589999999999999999999876543 3579999999875

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=97.61  E-value=4.4e-07  Score=72.68  Aligned_cols=69  Identities=20%  Similarity=0.434  Sum_probs=54.6

Q ss_pred             ecccccCcccccCc---ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEceeeeeccCceEEE
Q 010831          224 TCEVCTGTGAKMGS---KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  292 (499)
Q Consensus       224 ~C~~C~GsG~~~g~---~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~  292 (499)
                      .|..|+|.|.....   ...+|..|+|+|..........+.+++-..|..|+|.|..+.+.|..|++.|++.
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            69999999865433   3468999999997655555555556566889999999999999999999999753

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=1e-05  Score=63.14  Aligned_cols=46  Identities=33%  Similarity=0.804  Sum_probs=36.1

Q ss_pred             eeecccccCccccc-----CcceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEEc
Q 010831          222 LETCEVCTGTGAKM-----GSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  279 (499)
Q Consensus       222 ~~~C~~C~GsG~~~-----g~~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i~  279 (499)
                      ...|+.|+|+|...     .....+|+.|+|+|+++.            .+|..|+|.|.+.+
T Consensus        28 ~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~k   78 (79)
T d1exka_          28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEEC
T ss_pred             ceeCCCccceeEEEEecccceeeEECcccCcceeECC------------CCCCCCCCceEeec
Confidence            46799999999542     122568999999998753            58999999998864

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.20  E-value=3.8e-05  Score=59.07  Aligned_cols=46  Identities=28%  Similarity=0.690  Sum_probs=34.3

Q ss_pred             eecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEEE
Q 010831          223 ETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  278 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~i  278 (499)
                      ..|+.|+|+|.....         ...+|+.|+|+|+++..          ..+|+.|+|.|.+.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCC----------CCCCCCCCCeeEeC
Confidence            469999999964321         24679999999976431          15899999999764

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=81.27  E-value=0.1  Score=40.18  Aligned_cols=43  Identities=21%  Similarity=0.480  Sum_probs=29.1

Q ss_pred             eecccccCcccccCc---------ceeeccCCCCcceEEEEeeCCccceeeeeeCCCCCCCCEE
Q 010831          223 ETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  277 (499)
Q Consensus       223 ~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~v~~~~~~~~g~~~~~~~C~~C~G~G~~  277 (499)
                      ..|..|+|++.....         .-..|..|+|.|..+            ...|..|++.|.+
T Consensus        32 ~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~------------~~~C~~CH~~gr~   83 (90)
T d1m1qa_          32 AQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQ------------KPTCESCHDDGRT   83 (90)
T ss_dssp             HHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTC------------CCCSTTTCSSCCC
T ss_pred             CcCcccCCCceeEeeccccccCccccccCccccCCCCcC------------CCccccccCCCcc
Confidence            479999999865321         124566666766432            2579999999864