Citrus Sinensis ID: 010832

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
MATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKHD
cccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHcccccccccccEEEcccEEEEEEcHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccEEEccccEEEEEccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHHccccccccccccccEEEcccEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHcc
cccccccHHHHHHHHHHHHHHHHHHHcccccccccEEccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHccccEEccccEEEEEccHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHcccEEEccccEEEEEccccccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHccccccccccccEEEEEccEEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHEEEEcccccccccEEEEHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHccc
mateeentgnvKRELEKVFDLALkatvpnetdvrpLIAACTAKfgdyqcnnaMGLWSkikgkgtefkgpqpvgqaimknlppsemiescsvagpgfVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVvdfsspniakemhvgHLRSTIIGDSLARMLEFSNVEVLrrnhvgdwgtQFGMLIEYLFekfpnsedanETAIGELQEFYRRsknrfdsdpafKERAQQAVVRLqsgepkyhEAWAQICEISRKEFDKVYKRLRVDLEekgesfynpyipgvidelskqglveesqgaRVIFIEGVNIPLIIvksdggfnyasTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKragwlsaddstypkashvgfglvlgedgkrlRTRFSEVVRLVDLLDEAKNRSKAVLIergkdkewtEEELEQTAEAVGYGaakyfdlknnrltnytfsfdqmlndkgnTAVYLLYAHARICSIIRKSGKDIEELKKHD
mateeentgnvkrelEKVFDLALkatvpnetdvrPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSspniakemhvghLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVrlqsgepkyhEAWAQICEISRKEFDKVYKRLRVDLeekgesfynpyipGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVgfglvlgedgkrlrTRFSEVVRlvdlldeaknrskavliergkdkewteeELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIrksgkdieelkkhd
MATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKewteeeleqtaeaVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKHD
***************EKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGT********************MIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP*********************************************PKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER*****W****LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIR*************
******N***VKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLV************KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRS****************ELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI*******
***********KRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKHD
*****ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKD********
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MATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKHD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query499 2.2.26 [Sep-21-2011]
P37880 661 Arginine--tRNA ligase, cy yes no 0.969 0.732 0.498 1e-135
Q8KPU9584 Arginine--tRNA ligase OS= yes no 0.939 0.803 0.5 1e-134
Q5N643584 Arginine--tRNA ligase OS= yes no 0.939 0.803 0.5 1e-134
A7YW98 660 Arginine--tRNA ligase, cy yes no 0.961 0.727 0.498 1e-134
Q6P1S4 660 Arginine--tRNA ligase, cy yes no 0.963 0.728 0.491 1e-134
Q9VXN4665 Probable arginine--tRNA l yes no 0.973 0.730 0.482 1e-132
Q9D0I9 660 Arginine--tRNA ligase, cy yes no 0.957 0.724 0.492 1e-132
P40329 660 Arginine--tRNA ligase, cy yes no 0.969 0.733 0.486 1e-132
P54136 660 Arginine--tRNA ligase, cy yes no 0.969 0.733 0.492 1e-132
Q5RA20 660 Arginine--tRNA ligase, cy yes no 0.969 0.733 0.488 1e-132
>sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS PE=2 SV=1 Back     alignment and function desciption
 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/495 (49%), Positives = 334/495 (67%), Gaps = 11/495 (2%)

Query: 6   ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
           +N  N+   L+ VF  A+KA  P+  D  PL+   +   KFGDYQCN+AMG+   +K K 
Sbjct: 72  KNMININSRLQDVFGCAIKAAYPD-LDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKE 130

Query: 64  TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
            +   P+ + + I K+LP +E I+   +AGPGF+NV L K+++++ +  +LV+GI+   P
Sbjct: 131 QKV-NPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQL--P 187

Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
            L   KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+  +VLR NHVGDWGTQFG
Sbjct: 188 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFG 247

Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
           MLI +L ++FP+    +   IG+LQ FY+ SK RFD++  FK+RA Q VV LQS +P + 
Sbjct: 248 MLIAHLQDQFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVSLQSKDPDFI 306

Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
           +AW  IC++SR EF+K+Y  L + L E+GESFY   +  ++ E   +G V+   G +++F
Sbjct: 307 KAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGYVQVDDGRKIVF 366

Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
           + G +IPL IVKSDGGF Y ++DLAA+  RL EEKA  IIYV D GQ +HF  +F+AA+ 
Sbjct: 367 VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAVHFQTIFAAAQM 426

Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
            GW    D    + +HVGFG+VLGED K+ +TR  E VRLVDLL E   RS   L E+ +
Sbjct: 427 IGWY---DPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGLKRSMDKLKEKER 483

Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
           DK  TEEEL     ++ YG  KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA  RI 
Sbjct: 484 DKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIR 543

Query: 483 SIIRKSGKDIEELKK 497
           SI R +  D E L+K
Sbjct: 544 SIARLANVDEEMLQK 558
Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis. Modulates the secretion of AIMP1 and may be involved in generation of the inflammatory cytokine EMAP2 from AIMP1.
Cricetulus griseus (taxid: 10029)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9
>sp|Q8KPU9|SYR_SYNE7 Arginine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942) GN=argS PE=3 SV=2 Back     alignment and function description
>sp|Q5N643|SYR_SYNP6 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=argS PE=3 SV=1 Back     alignment and function description
>sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1 Back     alignment and function description
>sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars PE=2 SV=1 Back     alignment and function description
>sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster GN=Aats-arg PE=2 SV=1 Back     alignment and function description
>sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2 SV=2 Back     alignment and function description
>sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars PE=1 SV=2 Back     alignment and function description
>sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2 Back     alignment and function description
>sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query499
224064484590 predicted protein [Populus trichocarpa] 0.995 0.842 0.839 0.0
255546293592 arginyl-tRNA synthetase, putative [Ricin 0.993 0.837 0.830 0.0
449435790590 PREDICTED: arginine--tRNA ligase, cytopl 0.995 0.842 0.824 0.0
225445067 649 PREDICTED: arginyl-tRNA synthetase-like 0.995 0.765 0.805 0.0
15236164 642 Arginyl-tRNA synthetase, class Ic [Arabi 0.995 0.774 0.783 0.0
297799374590 arginyl-tRNA synthetase [Arabidopsis lyr 0.995 0.842 0.783 0.0
2632106590 arginyl-tRNA synthetase [Arabidopsis tha 0.995 0.842 0.783 0.0
297738741 691 unnamed protein product [Vitis vinifera] 0.995 0.719 0.738 0.0
15219682590 arginyl-tRNA synthetase [Arabidopsis tha 0.991 0.838 0.776 0.0
2632103589 arginyl-tRNA synthetase [Arabidopsis tha 0.991 0.840 0.776 0.0
>gi|224064484|ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/498 (83%), Positives = 449/498 (90%), Gaps = 1/498 (0%)

Query: 1   MATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIK 60
           MA E+EN GN+K++L K+F L+L+ATVP E D+ PL+AACTAKFGDYQCNNAMGLWSKIK
Sbjct: 1   MAAEQENAGNLKQKLAKLFQLSLEATVPGEPDIEPLVAACTAKFGDYQCNNAMGLWSKIK 60

Query: 61  GK-GTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIE 119
           G+ G EF+GP  VGQAIMKNLP SEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIE
Sbjct: 61  GRPGIEFRGPPAVGQAIMKNLPQSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIE 120

Query: 120 TWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGT 179
           TWAPKL +K+AVVDFSSPNIAKEMHVGHLRSTIIGD+LA MLEFSNVEVLRRNHVGDWGT
Sbjct: 121 TWAPKLSIKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLASMLEFSNVEVLRRNHVGDWGT 180

Query: 180 QFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEP 239
           QFGMLIE+LFEKFPN ED NETAIG+LQ FY+ SK RFD D  FK+RAQ+AVVRLQSGE 
Sbjct: 181 QFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVDAEFKDRAQKAVVRLQSGEQ 240

Query: 240 KYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGAR 299
            Y +AWAQICEISR+EFD+VY+RL V LEEKGESFYNPYIPGVI+ L+ QGLVEES+GAR
Sbjct: 241 MYRKAWAQICEISRREFDQVYQRLGVHLEEKGESFYNPYIPGVIEALTNQGLVEESKGAR 300

Query: 300 VIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSA 359
           VIFIEG+NIPLI+VKSDGG+NYASTD+ ALWYRL EEKAEWIIYVTDVGQQ HFDM F A
Sbjct: 301 VIFIEGINIPLIVVKSDGGYNYASTDMTALWYRLTEEKAEWIIYVTDVGQQQHFDMFFKA 360

Query: 360 AKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIE 419
           AKRAGWL ADD  YPKASHVGFGLVLGEDGKR RTR +EVVRL DLLDEAK RSKA LIE
Sbjct: 361 AKRAGWLPADDRQYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAKTRSKAALIE 420

Query: 420 RGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 479
           RGK  EWTEEELEQTAEAVGYGA KY DLKNNRLTNYTF FDQMLNDKGNTAVYLLYAHA
Sbjct: 421 RGKAAEWTEEELEQTAEAVGYGAVKYADLKNNRLTNYTFDFDQMLNDKGNTAVYLLYAHA 480

Query: 480 RICSIIRKSGKDIEELKK 497
           RICSIIRKSGKD  ELKK
Sbjct: 481 RICSIIRKSGKDTGELKK 498

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255546293|ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis] gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449435790|ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus] gi|449489808|ref|XP_004158422.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225445067|ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|15236164|ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297799374|ref|XP_002867571.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297313407|gb|EFH43830.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|2632106|emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297738741|emb|CBI27986.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15219682|ref|NP_176826.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|12322268|gb|AAG51163.1|AC074025_13 arginyl-tRNA synthetase [Arabidopsis thaliana] gi|14030685|gb|AAK53017.1|AF375433_1 At1g66530/F28G11_14 [Arabidopsis thaliana] gi|20334712|gb|AAM16217.1| At1g66530/F28G11_14 [Arabidopsis thaliana] gi|332196400|gb|AEE34521.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|2632103|emb|CAB11467.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query499
TAIR|locus:2136794642 emb1027 "embryo defective 1027 0.995 0.774 0.761 3.6e-208
TAIR|locus:2028982590 AT1G66530 [Arabidopsis thalian 0.991 0.838 0.758 1.6e-205
ZFIN|ZDB-GENE-030131-9014 661 rars "arginyl-tRNA synthetase" 0.965 0.729 0.480 3.6e-121
UNIPROTKB|A7YW98 660 RARS "Arginine--tRNA ligase, c 0.961 0.727 0.490 7.4e-121
UNIPROTKB|E2QRR5 660 RARS "Uncharacterized protein" 0.969 0.733 0.488 9.5e-121
UNIPROTKB|J9P440643 RARS "Uncharacterized protein" 0.969 0.752 0.488 9.5e-121
UNIPROTKB|P54136 660 RARS "Arginine--tRNA ligase, c 0.969 0.733 0.484 4.7e-119
RGD|1309215 660 Rars "arginyl-tRNA synthetase" 0.969 0.733 0.476 2e-118
MGI|MGI:1914297 660 Rars "arginyl-tRNA synthetase" 0.969 0.733 0.478 3.3e-118
FB|FBgn0027093665 Aats-arg "Arginyl-tRNA synthet 0.971 0.729 0.474 8.8e-118
TAIR|locus:2136794 emb1027 "embryo defective 1027" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2013 (713.7 bits), Expect = 3.6e-208, P = 3.6e-208
 Identities = 379/498 (76%), Positives = 433/498 (86%)

Query:     1 MATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT-AKFGDYQCNNAMGLWSKI 59
             MA  EE TGN+KR+L K+FD++LK TVP+E  V PL+AA    KFGDYQCNNAMGLWS I
Sbjct:    53 MAANEEFTGNLKRQLAKLFDVSLKLTVPDEPSVEPLVAASALGKFGDYQCNNAMGLWSII 112

Query:    60 KGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIE 119
             KGKGT+FKGP  VGQA++K+LP SEM+ESCSVAGPGF+NVVLS  WMAK+I+ ML+DG++
Sbjct:   113 KGKGTQFKGPPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVD 172

Query:   120 TWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGT 179
             TWAP L VK+AVVDFSSPNIAKEMHVGHLRSTIIGD+LARMLE+S+VEVLRRNHVGDWGT
Sbjct:   173 TWAPTLSVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGT 232

Query:   180 QFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEP 239
             QFGMLIEYLFEKFP+++   ETAIG+LQ FY+ SK++FD D AFKE+AQQAVVRLQ G+P
Sbjct:   233 QFGMLIEYLFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGDP 292

Query:   240 KYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGAR 299
              Y +AWA+IC+ISR EF KVY+RLRV+LEEKGESFYNP+I  VI+EL+ +GLVEES+GAR
Sbjct:   293 VYRKAWAKICDISRTEFAKVYQRLRVELEEKGESFYNPHIAKVIEELNSKGLVEESEGAR 352

Query:   300 VIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSA 359
             VIF+EG +IPL++VKSDGGFNYASTDL ALWYRLNEEKAEWIIYVTDVGQQ HF+M F A
Sbjct:   353 VIFLEGFDIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQQHFNMFFKA 412

Query:   360 AKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIE 419
             A++AGWL  +D TYP+ +HVGFGLVLGEDGKR RTR ++VVRLVDLLDEAK RSK  LIE
Sbjct:   413 ARKAGWLPDNDKTYPRVNHVGFGLVLGEDGKRFRTRATDVVRLVDLLDEAKTRSKLALIE 472

Query:   420 RGKDKXXXXXXXXXXXXXVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 479
             RGKDK             VGYGA KY DLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA
Sbjct:   473 RGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 532

Query:   480 RICSIIRKSGKDIEELKK 497
             RICSIIRKSGKDI+ELKK
Sbjct:   533 RICSIIRKSGKDIDELKK 550
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0004814 "arginine-tRNA ligase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006420 "arginyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP;NAS
GO:0005739 "mitochondrion" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010564 "regulation of cell cycle process" evidence=RCA
GO:0048366 "leaf development" evidence=RCA
GO:0048825 "cotyledon development" evidence=RCA
TAIR|locus:2028982 AT1G66530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9014 rars "arginyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A7YW98 RARS "Arginine--tRNA ligase, cytoplasmic" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRR5 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9P440 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P54136 RARS "Arginine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1309215 Rars "arginyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914297 Rars "arginyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0027093 Aats-arg "Arginyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B1X0N5SYR_CYAA56, ., 1, ., 1, ., 1, 90.4840.94780.8085yesno
Q3M769SYR_ANAVT6, ., 1, ., 1, ., 1, 90.50100.90180.7653yesno
B7KCT7SYR_CYAP76, ., 1, ., 1, ., 1, 90.45960.93980.8017yesno
Q5L6U4SYR_CHLAB6, ., 1, ., 1, ., 1, 90.43720.90380.8024yesno
Q5N643SYR_SYNP66, ., 1, ., 1, ., 1, 90.50.93980.8030yesno
Q8YQU9SYR_NOSS16, ., 1, ., 1, ., 1, 90.50320.88570.7517yesno
Q10XL4SYR_TRIEI6, ., 1, ., 1, ., 1, 90.47990.95590.8153yesno
Q8KPU9SYR_SYNE76, ., 1, ., 1, ., 1, 90.50.93980.8030yesno
B7JVP5SYR_CYAP86, ., 1, ., 1, ., 1, 90.44620.95190.8119yesno
B8HSK8SYR_CYAP46, ., 1, ., 1, ., 1, 90.50100.90180.7692yesno
Q2SMY0SYR_HAHCH6, ., 1, ., 1, ., 1, 90.42090.93380.8062yesno
Q824H4SYR_CHLCV6, ., 1, ., 1, ., 1, 90.43630.90980.8049yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.190.914
3rd Layer6.1.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
PLN02286576 PLN02286, PLN02286, arginine-tRNA ligase 0.0
COG0018577 COG0018, ArgS, Arginyl-tRNA synthetase [Translatio 1e-137
PRK01611507 PRK01611, argS, arginyl-tRNA synthetase; Reviewed 1e-126
TIGR00456566 TIGR00456, argS, arginyl-tRNA synthetase 1e-112
pfam00750345 pfam00750, tRNA-synt_1d, tRNA synthetases class I 1e-106
PRK12451562 PRK12451, PRK12451, arginyl-tRNA synthetase; Revie 7e-92
cd00671212 cd00671, ArgRS_core, catalytic core domain of argi 2e-68
cd07956156 cd07956, Anticodon_Ia_Arg, Anticodon-binding domai 1e-20
pfam0348584 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas 1e-15
smart0101685 smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta 9e-13
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 2e-07
smart00836122 smart00836, DALR_1, DALR anticodon binding domain 4e-04
pfam05746117 pfam05746, DALR_1, DALR anticodon binding domain 0.001
>gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase Back     alignment and domain information 
 Score =  977 bits (2529), Expect = 0.0
 Identities = 391/486 (80%), Positives = 430/486 (88%), Gaps = 3/486 (0%)

Query: 13  RELEKVFDLALKATVPNETDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
           REL K+F+ +L+ TVP+E  V PL+AACT  KFGDYQCNNAMGLWSK+KGKGT FK P+ 
Sbjct: 1   RELAKLFEASLRLTVPDEPSVEPLVAACTNPKFGDYQCNNAMGLWSKLKGKGTSFKNPRA 60

Query: 72  VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAV 131
           V QAI+KNLP SEMIES SVAGPGFVNV LS +W+AK I++MLVDGI+TWAP L VK+AV
Sbjct: 61  VAQAIVKNLPASEMIESTSVAGPGFVNVRLSASWLAKRIERMLVDGIDTWAPTLPVKRAV 120

Query: 132 VDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEK 191
           VDFSSPNIAKEMHVGHLRSTIIGD+LARMLEFS VEVLRRNHVGDWGTQFGMLIE+LFEK
Sbjct: 121 VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSGVEVLRRNHVGDWGTQFGMLIEHLFEK 180

Query: 192 FPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEI 251
           FPN E  ++ AIG+LQEFY+ +K RFD D  FK RAQQAVVRLQ G+P+Y  AWA+ICEI
Sbjct: 181 FPNWESVSDQAIGDLQEFYKAAKKRFDEDEEFKARAQQAVVRLQGGDPEYRAAWAKICEI 240

Query: 252 SRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLI 311
           SR+EF+KVY+RLRV+LEEKGESFYNPYIPGVI+EL  +GLV ES GARVIF+EG +IPLI
Sbjct: 241 SRREFEKVYQRLRVELEEKGESFYNPYIPGVIEELESKGLVVESDGARVIFVEGFDIPLI 300

Query: 312 IVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDS 371
           +VKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQ HFDMVF AAKRAGWL   + 
Sbjct: 301 VVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQQHFDMVFKAAKRAGWL--PED 358

Query: 372 TYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEEL 431
           TYP+  HVGFGLVLGEDGKR RTR  EVVRLVDLLDEAK+RSKA LIERGKD EWT EEL
Sbjct: 359 TYPRLEHVGFGLVLGEDGKRFRTRSGEVVRLVDLLDEAKSRSKAALIERGKDSEWTPEEL 418

Query: 432 EQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKD 491
           EQ AEAVGYGA KY DLKNNRLTNYTFSFDQML+ KGNTAVYLLYAHARICSIIRKSGKD
Sbjct: 419 EQAAEAVGYGAVKYADLKNNRLTNYTFSFDQMLDLKGNTAVYLLYAHARICSIIRKSGKD 478

Query: 492 IEELKK 497
           I+ELKK
Sbjct: 479 IDELKK 484

Length = 576
>gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) Back     alignment and domain information
>gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153410 cd07956, Anticodon_Ia_Arg, Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain Back     alignment and domain information
>gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|214846 smart00836, DALR_1, DALR anticodon binding domain Back     alignment and domain information
>gnl|CDD|218729 pfam05746, DALR_1, DALR anticodon binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 499
PLN02286576 arginine-tRNA ligase 100.0
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 100.0
PRK12451562 arginyl-tRNA synthetase; Reviewed 100.0
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 100.0
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 100.0
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 100.0
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 100.0
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 100.0
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 100.0
COG0215 464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 100.0
PLN02946 557 cysteine-tRNA ligase 100.0
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 100.0
PRK14536 490 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PRK14534 481 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 100.0
PRK00260 463 cysS cysteinyl-tRNA synthetase; Validated 100.0
PRK14535 699 cysS cysteinyl-tRNA synthetase; Provisional 100.0
TIGR00435 465 cysS cysteinyl-tRNA synthetase. This model finds t 100.0
PRK12418384 cysteinyl-tRNA synthetase; Provisional 100.0
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 100.0
KOG2007 586 consensus Cysteinyl-tRNA synthetase [Translation, 99.97
PRK11893 511 methionyl-tRNA synthetase; Reviewed 99.95
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.95
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.94
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.93
cd00674353 LysRS_core_class_I catalytic core domain of class 99.93
TIGR00398 530 metG methionyl-tRNA synthetase. The methionyl-tRNA 99.92
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.92
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 99.91
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.91
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 99.91
COG0143 558 MetG Methionyl-tRNA synthetase [Translation, ribos 99.9
PRK12268 556 methionyl-tRNA synthetase; Reviewed 99.9
TIGR00464 470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 99.89
PLN02224 616 methionine-tRNA ligase 99.89
PRK12267 648 methionyl-tRNA synthetase; Reviewed 99.88
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.88
PRK01406 476 gltX glutamyl-tRNA synthetase; Reviewed 99.87
PRK00750 510 lysK lysyl-tRNA synthetase; Reviewed 99.87
TIGR00467 515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.84
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 99.84
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 99.84
PRK14895 513 gltX glutamyl-tRNA synthetase; Provisional 99.83
PLN02610 801 probable methionyl-tRNA synthetase 99.81
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 99.81
PRK12558 445 glutamyl-tRNA synthetase; Provisional 99.81
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 99.8
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 99.78
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 99.73
PLN02943 958 aminoacyl-tRNA ligase 99.72
PF0348585 Arg_tRNA_synt_N: Arginyl tRNA synthetase N termina 99.72
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 99.72
PLN02627 535 glutamyl-tRNA synthetase 99.72
PRK04156 567 gltX glutamyl-tRNA synthetase; Provisional 99.71
cd00808239 GluRS_core catalytic core domain of discriminating 99.71
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 99.69
COG1384 521 LysS Lysyl-tRNA synthetase (class I) [Translation, 99.68
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 99.68
cd09287240 GluRS_non_core catalytic core domain of non-discri 99.68
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 99.66
PF00133 601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 99.66
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 99.65
KOG0436 578 consensus Methionyl-tRNA synthetase [Translation, 99.65
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 99.65
PLN02843 974 isoleucyl-tRNA synthetase 99.61
COG0008 472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 99.6
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 99.56
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 99.52
PLN03233 523 putative glutamate-tRNA ligase; Provisional 99.48
TIGR00463 560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 99.43
PTZ00402 601 glutamyl-tRNA synthetase; Provisional 99.42
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 99.39
PRK05347 554 glutaminyl-tRNA synthetase; Provisional 99.39
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 99.39
PLN02907 722 glutamate-tRNA ligase 99.38
KOG1149 524 consensus Glutamyl-tRNA synthetase (mitochondrial) 99.32
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 99.3
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 99.24
PLN02859 788 glutamine-tRNA ligase 99.24
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 99.24
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 99.23
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 99.22
TIGR00440 522 glnS glutaminyl-tRNA synthetase. This protein is a 99.22
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 99.18
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 99.18
PLN02381 1066 valyl-tRNA synthetase 99.17
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 99.16
PLN02563 963 aminoacyl-tRNA ligase 99.16
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 99.08
PTZ00437 574 glutaminyl-tRNA synthetase; Provisional 99.04
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 99.03
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 99.01
PLN02882 1159 aminoacyl-tRNA ligase 99.0
PLN02959 1084 aminoacyl-tRNA ligase 98.91
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 98.87
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 98.61
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 98.59
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 98.53
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 98.48
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 98.39
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 98.33
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 98.31
PLN02882 1159 aminoacyl-tRNA ligase 98.29
KOG1247 567 consensus Methionyl-tRNA synthetase [Translation, 98.27
PLN02381 1066 valyl-tRNA synthetase 98.12
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 98.06
PLN02959 1084 aminoacyl-tRNA ligase 98.04
PLN02563 963 aminoacyl-tRNA ligase 98.03
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 97.98
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 97.93
KOG1147 712 consensus Glutamyl-tRNA synthetase [Translation, r 97.47
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 97.46
PRK05912408 tyrosyl-tRNA synthetase; Validated 97.44
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 97.4
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 97.39
PRK13354410 tyrosyl-tRNA synthetase; Provisional 97.36
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 97.34
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 97.32
PRK08560329 tyrosyl-tRNA synthetase; Validated 97.24
PLN02486383 aminoacyl-tRNA ligase 97.18
KOG0433 937 consensus Isoleucyl-tRNA synthetase [Translation, 97.11
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 97.01
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 96.78
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 96.62
KOG0433 937 consensus Isoleucyl-tRNA synthetase [Translation, 96.49
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 96.41
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 95.68
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 94.0
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 93.92
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 93.41
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 92.48
PRK12284 431 tryptophanyl-tRNA synthetase; Reviewed 92.45
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 92.21
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 89.95
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 89.67
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 89.19
KOG1148 764 consensus Glutaminyl-tRNA synthetase [Translation, 87.32
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 86.68
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 83.88
>PLN02286 arginine-tRNA ligase Back     alignment and domain information 
Probab=100.00  E-value=7.4e-110  Score=902.55  Aligned_cols=455  Identities=82%  Similarity=1.310  Sum_probs=419.5

Q ss_pred             cccccc-CCCCcccccchHHHHHHhhcCCCCCCCChHHHHHHHHHhCCCCCCeeeEEEecCCeEEEEeChhHHHHHHHHH
Q 010832           35 PLIAAC-TAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM  113 (499)
Q Consensus        35 ~~v~~~-~~~~gd~~~~~a~~lak~~~~~~~~~~~p~~iA~~i~~~l~~~~~~~~v~vag~GfiN~~l~~~~~~~~~~~~  113 (499)
                      ..+++| +++|||||||+||.|||.++++++..++|++||++|++.|...+.|++|+++|||||||+|++.++.+.+..+
T Consensus        23 ~~i~~~~~~~~GD~a~n~a~~lak~~~~~~~~~k~P~~iA~~i~~~l~~~~~i~~v~vagpGfiNf~l~~~~l~~~l~~~  102 (576)
T PLN02286         23 PLVAACTNPKFGDYQCNNAMGLWSKLKGKGTSFKNPRAVAQAIVKNLPASEMIESTSVAGPGFVNVRLSASWLAKRIERM  102 (576)
T ss_pred             eEEecCCCCCCCCcccchHHHHHHHhCccccccCCHHHHHHHHHHhCccccceeeEEEcCCCeEEEEECHHHHHHHHHHH
Confidence            445544 7899999999999999999988888899999999999999776779999999999999999999999999988


Q ss_pred             HHcCCCCCCCcCCCceEEEEecCCCCCCCCccchhhHhHHHHHHHHHHHHCCCeEEEEeccCCcchHHHHHHHHHHhhCC
Q 010832          114 LVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP  193 (499)
Q Consensus       114 ~~~~~~~~~~~~~~~~v~Ve~~SpNp~~plHiGH~R~~iiGD~larll~~~G~~V~~~~yi~D~G~Qi~~l~~~~~~~~~  193 (499)
                      +..+..++.+...+++|+||||||||||||||||+||++|||+|||+|+++||+|+++|||||||+||++++.++...+|
T Consensus       103 ~~~~~~~g~~~~~~~~v~VEfsSpNp~kplHvGHlRsaiiGdsLaril~~~G~~V~r~nyinD~G~Qi~~l~~~~~~~~~  182 (576)
T PLN02286        103 LVDGIDTWAPTLPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSGVEVLRRNHVGDWGTQFGMLIEHLFEKFP  182 (576)
T ss_pred             HHcCcccCCCCCCCceEEEEecCCCCCCCCccccccchhhHHHHHHHHHHcCCceEEEEeecchHHHHHHHHHHHHHhcC
Confidence            87765544343456899999999999999999999999999999999999999999999999999999999988866677


Q ss_pred             CCCccccchHHHHHHHHHHHhcccCCChHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeeccc
Q 010832          194 NSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGES  273 (499)
Q Consensus       194 ~~~~~~~~~i~~l~~~y~~~~~~~~~~~~~~~~a~~~~~~~e~gd~~~~~~w~~~~~~~~~~~~~~~~~LgI~fd~~~es  273 (499)
                      +...+.+.++.++..+|+++++.++.+|++.+++++.+.+||+||+++..+|++++++++..|+++|++|||+||..+||
T Consensus       183 ~~~~~~~~~i~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~le~gd~~~~~lw~~~~~~~~~~~~~~y~~l~V~fd~~ges  262 (576)
T PLN02286        183 NWESVSDQAIGDLQEFYKAAKKRFDEDEEFKARAQQAVVRLQGGDPEYRAAWAKICEISRREFEKVYQRLRVELEEKGES  262 (576)
T ss_pred             cccccCcccHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCch
Confidence            64434567899998899999999999999999999999999999999999999999999999999999999999877889


Q ss_pred             cccCcHHHHHHHHHHCCCeEeecCeEEEEecCCCCCeEEEcCCCcccccchhHHHHHHHHhhcCCCeEEEEecCCccccH
Q 010832          274 FYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHF  353 (499)
Q Consensus       274 ~~~~~v~~~i~~L~~~g~~y~~dGa~~~~~~g~~~d~vl~ksDG~~~Y~t~DiA~~~~k~~~~~~d~~i~V~g~~q~~hf  353 (499)
                      +|.+.+.++++.|+++|++|++||++|+++++.+.++||+||||++||+|+|||||.||++.+++|++|||||++|+.||
T Consensus       263 ~y~~~~~~vi~~L~~~g~~~e~dGa~~v~l~~~~~~~vl~ksDGt~tY~t~DIA~~~~k~~~~~~d~~IyVvg~~q~~hf  342 (576)
T PLN02286        263 FYNPYIPGVIEELESKGLVVESDGARVIFVEGFDIPLIVVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQQHF  342 (576)
T ss_pred             hhhhhHHHHHHHHHHCCCEEeeCCceEeeccCCCCceEEEECCCchhhHHHHHHHHHHHHhccCCCEEEEEEeCcHHHHH
Confidence            99988999999999999999999999998876657899999999999999999999999987799999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCcEEEEEeEEEecCCCCccccccCCcccHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Q 010832          354 DMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQ  433 (499)
Q Consensus       354 ~~~~~~~~~lG~~~~~~~~~~~~~Hv~~g~V~~~~g~KMSkR~G~~v~l~dll~e~~~~a~~~~~~~~~~~~~~~~~~~~  433 (499)
                      +|++++++++|+.++  +++.++.|+.||||++.+|+|||||+|++|+|+||++++.++|++.+.++++.+++++++.++
T Consensus       343 ~~v~~~l~~lG~~~~--~~~~~l~h~~~g~V~~~~g~kmStR~G~~v~L~dlldea~~~a~~~~~~~~~~~~~~~~~~~~  420 (576)
T PLN02286        343 DMVFKAAKRAGWLPE--DTYPRLEHVGFGLVLGEDGKRFRTRSGEVVRLVDLLDEAKSRSKAALIERGKDSEWTPEELEQ  420 (576)
T ss_pred             HHHHHHHHHcCCCcc--ccCCceEEEeeccEECCCCCcccCCCCCeeEHHHHHHHHHHHHHHHHHhccCccccchhhHHH
Confidence            999999999998410  124579999999998788989999999999999999999999999999987667799999999


Q ss_pred             HHHHhhhhHHHHHhhcCCCCCCccccHHHHhcccCCchhHHHHHHHHHHHHHHHhCCC
Q 010832          434 TAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKD  491 (499)
Q Consensus       434 ~a~~vg~~airy~~L~~~~~~~~~Fd~~~~~~~~~n~~~YlqYa~aR~~silrk~~~~  491 (499)
                      +|+.+|++|+||++|++++.++++|||+++++++|||+|||||||||+||||||++.+
T Consensus       421 ~a~~vg~~Airy~~L~~~~~~~~~Fd~d~~l~~~g~t~pYlQYahAR~~SIlrKa~~~  478 (576)
T PLN02286        421 AAEAVGYGAVKYADLKNNRLTNYTFSFDQMLDLKGNTAVYLLYAHARICSIIRKSGKD  478 (576)
T ss_pred             HHHHhhhhhhhhhhhhcCCCCCCccCHHHHHhhcCCChHHHHHHHHHHHHHHHhccCc
Confidence            9999999999999999999999999999999999999999999999999999999753

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
1bs2_A607 Yeast Arginyl-Trna Synthetase Length = 607 2e-43
1iq0_A592 Thermus Thermophilus Arginyl-Trna Synthetase Length 7e-21
2zue_A629 Crystal Structure Of Pyrococcus Horikoshii Arginyl- 2e-17
3gdz_A109 Crystal Structure Of Arginyl-Trna Synthetase From K 5e-05
>pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 Back     alignment and structure 
Iteration: 1

 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 216/444 (48%), Gaps = 29/444 (6%)
Query: 67  KGPQPVGQAIM--KNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPK 124
           KG  P   A+   +  P  + +E     GP F+    +  ++AK +   ++   E +   
Sbjct: 79  KGANPKDLAVQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSC 137
Query: 125 LRV--KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
             V  KK +++FSSPNIAK  H GHLRSTIIG  LA + E    EV+R N++GDWG QFG
Sbjct: 138 KLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFG 197
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRF----DSDP---AFKERAQQAVVRLQ 235
           +L    FE++ N E   +  I  L + Y R         DS P   +   +A++   R++
Sbjct: 198 LL-AVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRME 256
Query: 236 SGEPKYHEAWAQICEISRKEFDKVYKRLRVDLE-EKGES-FYNPYIPGVIDELSKQGLVE 293
            G+ +  + W +  E S +++   Y RL +  +   GES      +   ID   ++GL  
Sbjct: 257 DGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTH 316
Query: 294 ESQGARVIFIEGVNIPL---IIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQ 350
           E +GA +I +   N  L   I+ KSDG   Y + D+ A   R  +   + +IYV    Q 
Sbjct: 317 EDKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQD 376
Query: 351 LHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAK 410
           LH    F   K+ G+  A D       HV FG+V G     + TR   VV L ++L+E K
Sbjct: 377 LHAAQFFEILKQMGFEWAKD-----LQHVNFGMVQG-----MSTRKGTVVFLDNILEETK 426
Query: 411 NRSKAVLIERGKDKXXXXXXXXXXXXXVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNT 470
            +   V+ ++ ++K             VG  A    D++  R+ NY F +++ML+ +G+T
Sbjct: 427 EKMHEVM-KKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDT 485
Query: 471 AVYLLYAHARICSIIRKSGKDIEE 494
             YL YAH+R+ S+ R +    +E
Sbjct: 486 GPYLQYAHSRLRSVERNASGITQE 509
>pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592 Back     alignment and structure
>pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 Back     alignment and structure
>pdb|3GDZ|A Chain A, Crystal Structure Of Arginyl-Trna Synthetase From Klebsiella Pneumoniae Subsp. Pneumoniae Length = 109 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 0.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 1e-169
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 1e-157
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 2e-20
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 7e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 Back     alignment and structure
 Score =  581 bits (1499), Expect = 0.0
 Identities = 141/504 (27%), Positives = 231/504 (45%), Gaps = 37/504 (7%)

Query: 10  NVKRELEKVFDLALKATVPNETD-VRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFK 67
           N+   +       L      ++  + P +      + GD           +IKG      
Sbjct: 30  NIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPR---LRIKGAN---- 82

Query: 68  GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIET--WAPKL 125
            P+ +     +  P  + +E     GP F+    +  ++AK +   ++   E       +
Sbjct: 83  -PKDLAVQWAEKFPCGDFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLV 140

Query: 126 RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLI 185
             KK +++FSSPNIAK  H GHLRSTIIG  LA + E    EV+R N++GDWG QFG+L 
Sbjct: 141 ENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLA 200

Query: 186 EYLFEKFPNSEDANETAIGELQEFYRRSKNRFD-------SDPAFKERAQQAVVRLQSGE 238
              FE++ N E   +  I  L + Y R     +        + +   +A++   R++ G+
Sbjct: 201 VG-FERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGD 259

Query: 239 PKYHEAWAQICEISRKEFDKVYKRLRVDL-EEKGES-FYNPYIPGVIDELSKQGLVEESQ 296
            +  + W +  E S +++   Y RL +      GES      +   ID   ++GL  E +
Sbjct: 260 EEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDK 319

Query: 297 GARVIFIEGVNIPL---IIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHF 353
           GA +I +   N  L   I+ KSDG   Y + D+ A   R  +   + +IYV    Q LH 
Sbjct: 320 GAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHA 379

Query: 354 DMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRS 413
              F   K+ G+  A         HV FG+V G     + TR   VV L ++L+E K + 
Sbjct: 380 AQFFEILKQMGFEWAK-----DLQHVNFGMVQG-----MSTRKGTVVFLDNILEETKEKM 429

Query: 414 KAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVY 473
             V +++ ++K    E  E+ A+ VG  A    D++  R+ NY F +++ML+ +G+T  Y
Sbjct: 430 HEV-MKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPY 488

Query: 474 LLYAHARICSIIRKSGKDIEELKK 497
           L YAH+R+ S+ R +    +E   
Sbjct: 489 LQYAHSRLRSVERNASGITQEKWI 512
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query499
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 100.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 100.0
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 100.0
1li5_A 461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 100.0
3tqo_A 462 Cysteinyl-tRNA synthetase; protein synthesis, liga 100.0
3sp1_A 501 Cysteinyl-tRNA synthetase; structural genomics, se 100.0
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 100.0
4dlp_A 536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
3kfl_A 564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
2csx_A 497 Methionyl-tRNA synthetase; ligase, riken structura 99.98
2d5b_A 500 Methionyl-tRNA synthetase; rossmann fold, class 1A 99.97
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 99.97
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 99.96
2o5r_A 481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 99.94
1irx_A 523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.94
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 99.93
3al0_C 592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 99.93
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 99.91
1wkb_A 810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 99.89
3afh_A 488 Glutamyl-tRNA synthetase 2; protein-substrate comp 99.88
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.87
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 99.85
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 99.84
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 99.84
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 99.84
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 99.82
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 99.82
4g6z_A 490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 99.82
2cfo_A 492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 99.82
1j09_A 468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 99.79
2ja2_A 498 Glutamyl-tRNA synthetase; non-discriminating gluta 99.76
3aii_A 553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 99.74
4gri_A 512 Glutamate--tRNA ligase; structural genomics, seatt 99.74
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 99.71
1qtq_A 553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 99.64
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 99.63
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 98.22
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 98.19
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 98.0
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 97.54
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 97.53
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 97.3
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 97.22
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 96.76
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 95.1
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 94.79
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 94.5
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 93.97
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 93.95
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 93.86
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 93.59
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 93.23
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 93.1
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 93.08
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 92.57
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 92.49
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 92.32
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 92.3
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 92.22
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 92.18
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 91.94
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 91.25
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 91.22
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 91.18
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 91.06
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 89.86
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 89.59
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 85.24
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 84.69
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 81.79
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-99  Score=824.70  Aligned_cols=463  Identities=29%  Similarity=0.459  Sum_probs=400.3

Q ss_pred             HhHHHHHHHHHHHHHHhhCCCCC-CCccccccc-CCCCcccccchHHHHHHhhcCCCCCCCChHHHHHHHHHhCCCCCCe
Q 010832            9 GNVKRELEKVFDLALKATVPNET-DVRPLIAAC-TAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMI   86 (499)
Q Consensus         9 ~~~~~~~~~~l~~~l~~~~~~~~-~~~~~v~~~-~~~~gd~~~~~a~~lak~~~~~~~~~~~p~~iA~~i~~~l~~~~~~   86 (499)
                      +++.+.+++.|.++|...+.... ...+.+++| ++.||||+||+||  +|.+|      ++|++||++|+++|+..+.|
T Consensus        29 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~v~~~~~~~~GD~a~~~~~--~k~~~------~~P~~iA~~i~~~l~~~~~i  100 (607)
T 1f7u_A           29 VNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPR--LRIKG------ANPKDLAVQWAEKFPCGDFL  100 (607)
T ss_dssp             TCHHHHHHHHHHHHHHHHHCCCHHHHGGGCEECSSGGGCSEEEEGGG--GCCTT------CCHHHHHHHHHHTCCCTTTE
T ss_pred             ccHHHHHHHHHHHHHHHHhCCCccccccceeCCCCCCCCchhhHHHH--HHhcC------CCHHHHHHHHHHhccccCce
Confidence            35666777777777766532111 122345555 7899999999776  38777      99999999999999877789


Q ss_pred             eeEEEecCCeEEEEeChhHHHHHH-HHHHHcCCCCCC-CcCCCceEEEEecCCCCCCCCccchhhHhHHHHHHHHHHHHC
Q 010832           87 ESCSVAGPGFVNVVLSKNWMAKNI-QKMLVDGIETWA-PKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFS  164 (499)
Q Consensus        87 ~~v~vag~GfiN~~l~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~v~Ve~~SpNp~~plHiGH~R~~iiGD~larll~~~  164 (499)
                      ++++++|| ||||+|+++++.+.+ ..++..++.++. +.+.+++|+||||||||||||||||+|++|+||+|+|+|+++
T Consensus       101 ~~ve~ag~-fiN~~l~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~V~ve~~spN~~~plHvGHlRs~iiGD~laRil~~~  179 (607)
T 1f7u_A          101 EKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKL  179 (607)
T ss_dssp             EEEEEETT-EEEEEECHHHHHHHHHHHHHHHGGGTTCCCCSSCCEEEEECCCCBTTSCCBGGGHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEcCC-EEEEEECHHHHHHHHHHHHHhhhhhcCCCcccCCCeEEEEecCCCCCCCCccchHHHHHHHHHHHHHHHHc
Confidence            99999996 999999999999754 456666655443 346789999999999999999999999999999999999999


Q ss_pred             CCeEEEEeccCCcchHHHHHHHHHHhhCCCCCccccchHHHHHHHHHHHhcccCCC-------hHHHHHHHHHHHHhccC
Q 010832          165 NVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSD-------PAFKERAQQAVVRLQSG  237 (499)
Q Consensus       165 G~~V~~~~yi~D~G~Qi~~l~~~~~~~~~~~~~~~~~~i~~l~~~y~~~~~~~~~~-------~~~~~~a~~~~~~~e~g  237 (499)
                      ||+|+++|||||||+||++|+.+ ..++++......+++.++.++|+++++.++.+       +.+.++|++.+.+||+|
T Consensus       180 G~~V~~~~~i~D~G~Q~~~l~~~-~~~~g~~~~~~~~~i~~l~~~Y~~~~~~~~~~~e~g~~~~~i~~~A~~~~~~le~g  258 (607)
T 1f7u_A          180 GWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDG  258 (607)
T ss_dssp             TCEEEEEEEEBCCSHHHHHHHHH-HHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHSTTSSCHHHHSSHHHHHHHHHHHHT
T ss_pred             CCCeeEEEeecCcchHHHHHHHH-HHHhCchhhccCCChHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHhhCC
Confidence            99999999999999999999977 45566432223457888999999999988877       88999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHcCCeee-eecccccc-CcHHHHHHHHHHCCCeEeecCeEEEEec--CCCCC-eEE
Q 010832          238 EPKYHEAWAQICEISRKEFDKVYKRLRVDLE-EKGESFYN-PYIPGVIDELSKQGLVEESQGARVIFIE--GVNIP-LII  312 (499)
Q Consensus       238 d~~~~~~w~~~~~~~~~~~~~~~~~LgI~fd-~~~es~~~-~~v~~~i~~L~~~g~~y~~dGa~~~~~~--g~~~d-~vl  312 (499)
                      ++++.++|+.+++++++.|+++|++|||+|| |.+||.|. +.+.++++.|+++|++|+++|++||+++  |++.| +|+
T Consensus       259 d~e~~~~w~~~~~~~~~~~~~~~~~L~V~fD~~~~ES~~~~~~~~~vi~~L~~kG~~ye~dGa~~~~~~~~g~~~d~~v~  338 (607)
T 1f7u_A          259 DEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIV  338 (607)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEGGGCCHHHHHHHHHHHHHTTCEEEETTEEEEEGGGTCTTTCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHcCCcceeecCcchhhhhHHHHHHHHHHhCCCEEEECCcEEEEecccCCCCCceeE
Confidence            9999999999999999999999999999995 67899887 7899999999999999999999999998  44544 899


Q ss_pred             EcCCCcccccchhHHHHHHHHhhcCCCeEEEEecCCccccHHHHHHHHHHcCCCCCCCCCCCcEEEEEeEEEecCCCCcc
Q 010832          313 VKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRL  392 (499)
Q Consensus       313 ~ksDG~~~Y~t~DiA~~~~k~~~~~~d~~i~V~g~~q~~hf~~~~~~~~~lG~~~~~~~~~~~~~Hv~~g~V~~~~g~KM  392 (499)
                      +||||+++|.|+|||||+||+..+++|++|||||++|++||+|++++++++|+     +++..|+|++||+|.     ||
T Consensus       339 ~KsDG~~~Y~t~Dia~~~~k~~~~~~d~~IyV~g~~q~~~f~q~~~~~~~lG~-----~~~~~~~Hv~fg~v~-----kM  408 (607)
T 1f7u_A          339 QKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGF-----EWAKDLQHVNFGMVQ-----GM  408 (607)
T ss_dssp             ECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGGGHHHHHHHHHHHHHTTC-----GGGGGEEEECCCCEE-----SC
T ss_pred             eccCCCcCCCCCcHHHHHHHHhhcCCCcEEEEEcChHhhHHHHHHHHHHHcCC-----CcCcEEEEecccccc-----cc
Confidence            99999999999999999999977899999999999999999999999999999     456689999999997     49


Q ss_pred             ccccCCcccHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhhhhHHHHHhhcCCCCCCccccHHHHhcccCCchh
Q 010832          393 RTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAV  472 (499)
Q Consensus       393 SkR~G~~v~l~dll~e~~~~a~~~~~~~~~~~~~~~~~~~~~a~~vg~~airy~~L~~~~~~~~~Fd~~~~~~~~~n~~~  472 (499)
                      |||+||+|+|+||++++..+|.+.+.++ +......++..++|++||+++|||++|+.+++++++|||+++++++|||||
T Consensus       409 SkR~G~~v~L~dLlde~~~~a~~~~~~~-~~~~~~~~e~~~~a~~vgi~avry~~Ls~~~~s~~~Fd~d~~~~~~g~t~p  487 (607)
T 1f7u_A          409 STRKGTVVFLDNILEETKEKMHEVMKKN-ENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP  487 (607)
T ss_dssp             CGGGTCCCBHHHHHHHHHHHHHHHHHTC-HHHHTTCSCHHHHHHHHHHHHHHHHHHSSCTTCCEECCHHHHHCCSSSSHH
T ss_pred             cCCCCCcccHHHHHHHHHHHHHHHHHhC-cccccchhhHHHHHHHHHHHHHHHHHhccCCCCCcccCHHHHHHHhccchH
Confidence            9999999999999999999998766522 110011367889999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHh-CCCh
Q 010832          473 YLLYAHARICSIIRKS-GKDI  492 (499)
Q Consensus       473 YlqYa~aR~~silrk~-~~~~  492 (499)
                      |||||||||||||||+ +.+.
T Consensus       488 ylqYa~aRi~SIlrka~~~~~  508 (607)
T 1f7u_A          488 YLQYAHSRLRSVERNASGITQ  508 (607)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCH
T ss_pred             HHHHHHHHHHHHHHHhcCCCc
Confidence            9999999999999999 6554
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 499
d1f7ua2348 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR 3e-77
d1iq0a2370 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS 4e-64
d1iq0a1126 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgR 7e-09
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 3e-08
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 3e-08
d1f7ua1124 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgR 4e-08
d1iq0a396 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), 1e-07
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 7e-05
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 3e-04
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 0.001
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Arginyl-tRNA synthetase (ArgRS)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  244 bits (622), Expect = 3e-77
 Identities = 111/353 (31%), Positives = 176/353 (49%), Gaps = 24/353 (6%)

Query: 128 KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEY 187
           KK +++FSSPNIAK  H GHLRSTIIG  LA + E    EV+R N++GDWG QFG+L   
Sbjct: 8   KKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG 67

Query: 188 LFEKFPNSEDANETAIGELQEFYRRSKNRFDSD-------PAFKERAQQAVVRLQSGEPK 240
            FE++ N E   +  I  L + Y R     + +        +   +A++   R++ G+ +
Sbjct: 68  -FERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEE 126

Query: 241 YHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPY--IPGVIDELSKQGLVEESQGA 298
             + W +  E S +++   Y RL +  +            +   ID   ++GL  E +GA
Sbjct: 127 ALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGA 186

Query: 299 RVIFIEGVNIPL---IIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDM 355
            +I +   N  L   I+ KSDG   Y + D+ A   R  +   + +IYV    Q LH   
Sbjct: 187 VLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQ 246

Query: 356 VFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKA 415
            F   K+ G+  A D       HV FG+V     + + TR   VV L ++L+E K +   
Sbjct: 247 FFEILKQMGFEWAKDLQ-----HVNFGMV-----QGMSTRKGTVVFLDNILEETKEKMHE 296

Query: 416 VLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKG 468
           V +++ ++K    E  E+ A+ VG  A    D++  R+ NY F +++ML+ +G
Sbjct: 297 V-MKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEG 348
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 Back     information, alignment and structure
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 126 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query499
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 100.0
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 100.0
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 100.0
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.96
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.95
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.95
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.94
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.91
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.91
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.86
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 99.77
d1h3na3 494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.76
d1iq0a396 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 99.73
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 99.61
d1f7ua3134 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 99.44
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 99.36
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 97.9
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 97.52
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 96.69
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 96.52
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 96.38
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Arginyl-tRNA synthetase (ArgRS)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-75  Score=599.98  Aligned_cols=333  Identities=32%  Similarity=0.505  Sum_probs=289.8

Q ss_pred             cCCCceEEEEecCCCCCCCCccchhhHhHHHHHHHHHHHHCCCeEEEEeccCCcchHHHHHHHHHHhhCCCCCccccchH
Q 010832          124 KLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAI  203 (499)
Q Consensus       124 ~~~~~~v~Ve~~SpNp~~plHiGH~R~~iiGD~larll~~~G~~V~~~~yi~D~G~Qi~~l~~~~~~~~~~~~~~~~~~i  203 (499)
                      .+++++|+||||||||||||||||+||+|+||+|||+|+++||+|+|+|||||||+||++|+.++.. ++........++
T Consensus         4 ~~~~kki~vE~~SaNpt~plHvGH~R~aiiGd~larlL~~~G~~V~re~yvnD~G~Qi~~l~~~~~~-~~~~~~~~~~~~   82 (348)
T d1f7ua2           4 LVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFER-YGNEEALVKDPI   82 (348)
T ss_dssp             CSSCCEEEEECCCCBTTSCCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHHH-HCCHHHHHHCHH
T ss_pred             CCCCCEEEEEecCCCCCCCcchhhhhhHHHHHHHHHHHHHCCCeEEEEEEECCchHHHHHHHHHHHH-hccccccccccc
Confidence            3678999999999999999999999999999999999999999999999999999999999987643 332111123455


Q ss_pred             HHHHHHHHHHhcccCC-------ChHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHHcCCeee-eeccc-c
Q 010832          204 GELQEFYRRSKNRFDS-------DPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLE-EKGES-F  274 (499)
Q Consensus       204 ~~l~~~y~~~~~~~~~-------~~~~~~~a~~~~~~~e~gd~~~~~~w~~~~~~~~~~~~~~~~~LgI~fd-~~~es-~  274 (499)
                      .++.++|.+..+.+..       .+.+.+++++.+.+++++|+++.++|+.+++.+++.++++|++|||+|| |++|| +
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~l~~~~~~~~~l~i~fD~~~~Es~~  162 (348)
T d1f7ua2          83 HHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQV  162 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSSCHHHHSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEGGGC
T ss_pred             hhHHHHHHHHHhhhcccchhhhhhhhhHhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc
Confidence            5666666665543321       2456778889999999999999999999999999999999999999996 67775 5


Q ss_pred             ccCcHHHHHHHHHHCCCeEeecCeEEEEec--CCCCCe-EEEcCCCcccccchhHHHHHHHHhhcCCCeEEEEecCCccc
Q 010832          275 YNPYIPGVIDELSKQGLVEESQGARVIFIE--GVNIPL-IIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQL  351 (499)
Q Consensus       275 ~~~~v~~~i~~L~~~g~~y~~dGa~~~~~~--g~~~d~-vl~ksDG~~~Y~t~DiA~~~~k~~~~~~d~~i~V~g~~q~~  351 (499)
                      +.+...++++.|.++|++++++|++|++.+  |++.++ +++||||++||+|+|||||.+|+..+++|++|||||++|++
T Consensus       163 ~~~~~~~v~~~L~~~~~~~~~~ga~~~~~~~~g~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~D~~I~V~g~dq~~  242 (348)
T d1f7ua2         163 SKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDL  242 (348)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEETTEEEEEGGGTCTTTCEEEEECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGGGHH
T ss_pred             cccchHHHHHHHHhhccccccCCcccccchhhccccccceeccCCCccceecchHHhhhhhhhccCCCEEEEecccccch
Confidence            555677899999999999999999999987  566555 66899999999999999999999877999999999999999


Q ss_pred             cHHHHHHHHHHcCCCCCCCCCCCcEEEEEeEEEecCCCCccccccCCcccHHHHHHHHHHHHHHHHHHhcCCCCCCHHHH
Q 010832          352 HFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEEL  431 (499)
Q Consensus       352 hf~~~~~~~~~lG~~~~~~~~~~~~~Hv~~g~V~~~~g~KMSkR~G~~v~l~dll~e~~~~a~~~~~~~~~~~~~~~~~~  431 (499)
                      ||+|+++++++||+     +++..+.|+.||+|.     |||||+||+|+|+|||+++.++|.+.+.++. ....+.++.
T Consensus       243 ~~~~l~~~l~~lg~-----~~~~~~~h~~~g~v~-----kMStR~G~~i~l~dll~e~~~~a~~~~~~~~-~~~~~~~~~  311 (348)
T d1f7ua2         243 HAAQFFEILKQMGF-----EWAKDLQHVNFGMVQ-----GMSTRKGTVVFLDNILEETKEKMHEVMKKNE-NKYAQIEHP  311 (348)
T ss_dssp             HHHHHHHHHHHTTC-----GGGGGEEEECCCCEE-----SCCGGGTCCCBHHHHHHHHHHHHHHHHHTCH-HHHTTCSCH
T ss_pred             hhhhHHHHHHHhCC-----CcccceeeecCCccc-----cccccCCCceEHHHHHHHHHHHHHHHHHhcc-CcCCChhhH
Confidence            99999999999998     356789999999996     5999999999999999999999999887652 223355678


Q ss_pred             HHHHHHhhhhHHHHHhhcCCCCCCccccHHHHhcccC
Q 010832          432 EQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKG  468 (499)
Q Consensus       432 ~~~a~~vg~~airy~~L~~~~~~~~~Fd~~~~~~~~~  468 (499)
                      +++|++||++||||++|+++|.++++|||+++++|+|
T Consensus       312 ~~ia~~vgv~ai~y~~L~~~~~~~~~Fd~d~~l~~eG  348 (348)
T d1f7ua2         312 EEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEG  348 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTCCEECCHHHHHCCSS
T ss_pred             HHHHHHhhHHheehhhhhcCCCCCCEECHHHhcCCCC
Confidence            9999999999999999999999999999999999986
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure