Citrus Sinensis ID: 010926

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------

MMNAESTSTTNPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

cccccccccccccEEEEcccccccccccccccccccEEEEccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccEEEEEEEcccccccccccEEEEEEcccEEEEEEEEEccEEEEEEEEEEccccEEEEEEEccccccEEEEEEEccccccccEEccccEEEEEEEcccccccccccccccccccEEEEEEEEEEEcccccEEEEcccEEEEEcccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccEEEEccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHccccccc

cccccccccccccEEEEcccHHHHHHccccccccEEEEEEcccccEEEEEcHcHcccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccEEEEcccccccccccccEEEEccccEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEcccccEEEEEEEcccccccEEEccccEEEEEEcccccccccccccccccccEEEEEEEEEEEEEccccEEEEcccEEEEEcccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccEEEEccccHHHccccccccccccccccHHHHHHHcccccHHHHHHHHHHccEEEEEccccccccccccccEccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccEEEEccccHHHcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHcHHHcc

mmnaeststtnplkitfngpakhftdaipigngrlgamvwggvpsetlklnedtlwtgvpgdytnpdapkalsDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIelefddshLKYAEETYRRELDLNTATARVKYSvgnveftrehfssnpdqVIVTKIsgsesgslsfnvsldslldnhsyvngnnqiimegrcpgkrippkananddpkgiqFSAILEIkisddrgtisaledkklkvegSDWAVLLLVASssfdgpfinpsdskkdptsESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSiqlsrspkdivtdtcseenidtvpsaervksfqtdedpsLVELLFQFGRYLLisssrpgtqvanlqgiwnedlsptwdsaphvninlemnywqslpcnlsecqepLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

mmnaeststtnplkiTFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEftrehfssnpdqVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASssfdgpfinpsdskkdptsESMSALQSIRNLSYSDLYTRHLDDYQKLFHrvsiqlsrspkdivtdtcseenidtvpsaervksfqtdedPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

*************KITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYT**********VRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFS***DQVIVTKI*******LSFNVSLDSLLDNHSYVNGNNQIIMEGR******************IQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASSSF*************************RNLSYSDLYTRHLDDYQKLFHRVSIQLS*****IV***************************SLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFL*

**************ITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDN*SYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIV**TCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

**********NPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPS**************QSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

********TTNPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRS***************TVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSISCLFLG

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		497	2.2.26 [Sep-21-2011]
Q8L7W8		843	Alpha-L-fucosidase 2 OS=A	yes	no	0.939	0.553	0.634	0.0
Q5AU81		809	Alpha-fucosidase A OS=Eme	no	no	0.871	0.535	0.296	9e-47
A2R797		793	Probable alpha-fucosidase	no	no	0.865	0.542	0.301	8e-46
Q2USL3		723	Probable alpha-fucosidase	no	no	0.863	0.593	0.257	1e-30

>sp\|Q8L7W8\|FUCO2_ARATH Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At4g34260 PE=2 SV=1	Back alignment and function desciption

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/484 (63%), Positives = 374/484 (77%), Gaps = 17/484 (3%)

Query: 10  TNPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAP 69
           + PLK+TF GP++++TDAIPIGNGRLGA +WGGV SE L +NEDT+WTGVP DYTN  AP
Sbjct: 49  SRPLKLTFGGPSRNWTDAIPIGNGRLGATIWGGVSSEILNINEDTIWTGVPADYTNQKAP 108

Query: 70  KALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELD 129
           +AL++VR LVD   YAEAT+ +VKL G P+DVYQ++GD+ LEFD SH KY + +YRRELD
Sbjct: 109 EALAEVRRLVDERNYAEATSEAVKLSGQPSDVYQIVGDLNLEFDSSHRKYTQASYRRELD 168

Query: 130 LNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNG 189
           L TA A+V YSVG V+F+RE F+SNPDQVI+ KI  S+ GSLSF VS DS L +HS  N 
Sbjct: 169 LETAVAKVSYSVGAVDFSREFFASNPDQVIIAKIYASKPGSLSFKVSFDSELHHHSETNP 228

Query: 190 N-NQIIMEGRCPGKRIP----PKANAN----DDPKGIQFSAILEIKISDDRGTISALEDK 240
             NQI+M G C  KR+P       NA     DD KG+QF++ILE+++S+  G++S+L  K
Sbjct: 229 KANQILMRGSCRPKRLPVNLKKSINATNIPYDDHKGLQFASILEVRVSNG-GSVSSLGGK 287

Query: 241 KLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDD 300
           KL VE +DWAVLLL ASS+FDGPF  P DSK DP  E ++ + S++  SYSDLY RHL D
Sbjct: 288 KLSVEKADWAVLLLAASSNFDGPFTMPVDSKIDPAKECVNRISSVQKYSYSDLYARHLGD 347

Query: 301 YQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYL 360
           YQKLF+RVS+ LS S       + +E       +AERV+SF+TD+DPSLVELLFQ+GRYL
Sbjct: 348 YQKLFNRVSLHLSGS-------STNETVQQATSTAERVRSFKTDQDPSLVELLFQYGRYL 400

Query: 361 LISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLT 420
           LISSSRPGTQVANLQGIWN D+ P WD APH+NINL+MNYW SLP N+ ECQEPLFD+++
Sbjct: 401 LISSSRPGTQVANLQGIWNRDIQPPWDGAPHLNINLQMNYWHSLPGNIRECQEPLFDYMS 460

Query: 421 YLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNY 480
            L+ING KTAQVNY ASGWV H  +DIWAK+S DRG+ VWALWPMGGAWLCTH WEHY Y
Sbjct: 461 ALAINGRKTAQVNYGASGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCTHAWEHYTY 520

Query: 481 TMDR 484
           TMD+
Sbjct: 521 TMDK 524

Hydrolyzes alpha-1,2-linked fucose. Also active on fucosylated xyloglucan oligosaccharides.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 1

>sp\|Q5AU81\|AFCA_EMENI Alpha-fucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=afcA PE=2 SV=1	Back alignment and function description

>sp\|A2R797\|AFCA_ASPNC Probable alpha-fucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=afcA PE=3 SV=1	Back alignment and function description

>sp\|Q2USL3\|AFCA_ASPOR Probable alpha-fucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=afcA PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		497
255573091		840	conserved hypothetical protein [Ricinus	0.959	0.567	0.739	0.0
224103687		803	predicted protein [Populus trichocarpa]	0.959	0.594	0.725	0.0
224103693		836	predicted protein [Populus trichocarpa]	0.971	0.577	0.705	0.0
224056204		808	predicted protein [Populus trichocarpa]	0.969	0.596	0.701	0.0
356574288		876	PREDICTED: alpha-L-fucosidase 2-like [Gl	0.953	0.541	0.688	0.0
356575686		874	PREDICTED: alpha-L-fucosidase 2-like [Gl	0.969	0.551	0.668	0.0
359475494		817	PREDICTED: alpha-L-fucosidase 2-like [Vi	0.933	0.567	0.731	0.0
356536151		877	PREDICTED: alpha-L-fucosidase 2-like [Gl	0.951	0.539	0.675	0.0
255573093		849	conserved hypothetical protein [Ricinus	0.951	0.557	0.676	0.0
449446103		803	PREDICTED: alpha-L-fucosidase 2-like [Cu	0.957	0.592	0.679	0.0

>gi\|255573091\|ref\|XP_002527475.1\| conserved hypothetical protein [Ricinus communis] gi\|223533115\|gb\|EEF34873.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/492 (73%), Positives = 416/492 (84%), Gaps = 15/492 (3%)

Query: 8   STTNPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPD 67
           S   PLK+TFNGPAKH+TD+IPIGNGR+GAM+ GG+ SE ++LNEDTLWTGVPG+YTNP+
Sbjct: 20  SYNKPLKVTFNGPAKHWTDSIPIGNGRIGAMISGGMQSEIIQLNEDTLWTGVPGNYTNPN 79

Query: 68  APKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRE 127
           A +ALS+VR LVD G YAEATAASVK FG+PADVYQLLGD++LEFDDSHL YA+ETY RE
Sbjct: 80  ALEALSEVRKLVDDGLYAEATAASVKFFGNPADVYQLLGDVKLEFDDSHLTYADETYYRE 139

Query: 128 LDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYV 187
           LDL+TATARV+YSVG+V+FT+E+F+SNPDQV V KISGS+SGSLSF VSLDS LD+H YV
Sbjct: 140 LDLDTATARVQYSVGDVKFTKEYFASNPDQVAVIKISGSKSGSLSFTVSLDSKLDHHCYV 199

Query: 188 NGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGS 247
           N  NQIIMEG CP KRIPPK +AN++PKGI+FSA+L++ +SD  G I  L++KKLKVEGS
Sbjct: 200 NVENQIIMEGSCPEKRIPPKMSANENPKGIKFSAVLDLHVSDGVGVIHVLDNKKLKVEGS 259

Query: 248 DWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHR 307
           DW VLLL ASSSF+ P   PSDSKKDPTSES+ AL++I NLSYSDLY RHL DYQKLFHR
Sbjct: 260 DWGVLLLAASSSFESPLTKPSDSKKDPTSESLRALKAITNLSYSDLYARHLHDYQKLFHR 319

Query: 308 VSIQLSRSPKDIVTDTCSEEN---------------IDTVPSAERVKSFQTDEDPSLVEL 352
           VS QL +S   IV D     N                D VP+ ER+KSFQ+DEDPSLVEL
Sbjct: 320 VSFQLWKSSNRIVGDESQLTNNLIPSANALYVKGIKDDAVPTVERIKSFQSDEDPSLVEL 379

Query: 353 LFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQ 412
           LFQFGRYLLIS SRPGTQVANLQG+WN+DL PTWDSAPH+NINLEMNYW SLPCNL+ECQ
Sbjct: 380 LFQFGRYLLISCSRPGTQVANLQGVWNKDLEPTWDSAPHLNINLEMNYWLSLPCNLNECQ 439

Query: 413 EPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCT 472
           EPLFDF+  LS+NGSKTAQVNY ASGWVIHHK+DIWAKSSADRG  VWALWP+GGAWLCT
Sbjct: 440 EPLFDFIKSLSVNGSKTAQVNYGASGWVIHHKSDIWAKSSADRGDAVWALWPIGGAWLCT 499

Query: 473 HLWEHYNYTMDR 484
           HLWEHYNYTMD+
Sbjct: 500 HLWEHYNYTMDK 511

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224103687\|ref\|XP_002313154.1\| predicted protein [Populus trichocarpa] gi\|222849562\|gb\|EEE87109.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224103693\|ref\|XP_002313157.1\| predicted protein [Populus trichocarpa] gi\|222849565\|gb\|EEE87112.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224056204\|ref\|XP_002298754.1\| predicted protein [Populus trichocarpa] gi\|222846012\|gb\|EEE83559.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356574288\|ref\|XP_003555281.1\| PREDICTED: alpha-L-fucosidase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|356575686\|ref\|XP_003555969.1\| PREDICTED: alpha-L-fucosidase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|359475494\|ref\|XP_002270199.2\| PREDICTED: alpha-L-fucosidase 2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356536151\|ref\|XP_003536603.1\| PREDICTED: alpha-L-fucosidase 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|255573093\|ref\|XP_002527476.1\| conserved hypothetical protein [Ricinus communis] gi\|223533116\|gb\|EEF34874.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|449446103\|ref\|XP_004140811.1\| PREDICTED: alpha-L-fucosidase 2-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		497
TAIR\|locus:2116154		843	FUC95A [Arabidopsis thaliana (	0.959	0.565	0.625	4.7e-167
UNIPROTKB\|G4NET6		827	MGG_00050 "Uncharacterized pro	0.406	0.244	0.408	1.9e-63
ASPGD\|ASPL0000008702		831	afcB [Emericella nidulans (tax	0.909	0.543	0.327	1.2e-53
ASPGD\|ASPL0000014922		809	afcA [Emericella nidulans (tax	0.871	0.535	0.301	1.4e-48
UNIPROTKB\|Q5AU81		809	afcA "Alpha-fucosidase A" [Asp	0.871	0.535	0.301	1.4e-48
ASPGD\|ASPL0000035173		757	afcC [Emericella nidulans (tax	0.430	0.282	0.368	9.2e-37

TAIR\|locus:2116154 FUC95A [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1625 (577.1 bits), Expect = 4.7e-167, P = 4.7e-167
 Identities = 311/497 (62%), Positives = 382/497 (76%)

Query:     1 MMNAESTSTTNPLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVP 60
             +M+ +  S   PLK+TF GP++++TDAIPIGNGRLGA +WGGV SE L +NEDT+WTGVP
Sbjct:    42 LMDGQDLS--RPLKLTFGGPSRNWTDAIPIGNGRLGATIWGGVSSEILNINEDTIWTGVP 99

Query:    61 GDYTNPDAPKALSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYA 120
              DYTN  AP+AL++VR LVD   YAEAT+ +VKL G P+DVYQ++GD+ LEFD SH KY 
Sbjct:   100 ADYTNQKAPEALAEVRRLVDERNYAEATSEAVKLSGQPSDVYQIVGDLNLEFDSSHRKYT 159

Query:   121 EETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSL 180
             + +YRRELDL TA A+V YSVG V+F+RE F+SNPDQVI+ KI  S+ GSLSF VS DS 
Sbjct:   160 QASYRRELDLETAVAKVSYSVGAVDFSREFFASNPDQVIIAKIYASKPGSLSFKVSFDSE 219

Query:   181 LDNHSYVNGN-NQIIMEGRCPGKRIPP--KANAN------DDPKGIQFSAILEIKISDDR 231
             L +HS  N   NQI+M G C  KR+P   K + N      DD KG+QF++ILE+++S+  
Sbjct:   220 LHHHSETNPKANQILMRGSCRPKRLPVNLKKSINATNIPYDDHKGLQFASILEVRVSNG- 278

Query:   232 GTISALEDKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYS 291
             G++S+L  KKL VE +DWAVLLL ASS+FDGPF  P DSK DP  E ++ + S++  SYS
Sbjct:   279 GSVSSLGGKKLSVEKADWAVLLLAASSNFDGPFTMPVDSKIDPAKECVNRISSVQKYSYS 338

Query:   292 DLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVE 351
             DLY RHL DYQKLF+RVS+ LS S  +   +T  +       +AERV+SF+TD+DPSLVE
Sbjct:   339 DLYARHLGDYQKLFNRVSLHLSGSSTN---ETVQQ----ATSTAERVRSFKTDQDPSLVE 391

Query:   352 LLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSEC 411
             LLFQ+GRYLLISSSRPGTQVANLQGIWN D+ P WD APH+NINL+MNYW SLP N+ EC
Sbjct:   392 LLFQYGRYLLISSSRPGTQVANLQGIWNRDIQPPWDGAPHLNINLQMNYWHSLPGNIREC 451

Query:   412 QEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLC 471
             QEPLFD+++ L+ING KTAQVNY ASGWV H  +DIWAK+S DRG+ VWALWPMGGAWLC
Sbjct:   452 QEPLFDYMSALAINGRKTAQVNYGASGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLC 511

Query:   472 THLWEHYNYTMDRVRFL 488
             TH WEHY YTMD+  FL
Sbjct:   512 THAWEHYTYTMDK-EFL 527

GO:0003824 "catalytic activity" evidence=IEA

GO:0004560 "alpha-L-fucosidase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0047513 "1,2-alpha-L-fucosidase activity" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

UNIPROTKB\|G4NET6 MGG_00050 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000008702 afcB [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000014922 afcA [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5AU81 afcA "Alpha-fucosidase A" [Aspergillus nidulans FGSC A4 (taxid:227321)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000035173 afcC [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		497
PF14498		236	Glyco_hyd_65N_2: Glycosyl hydrolase family 65, N-t	100.0
PRK13807		756	maltose phosphorylase; Provisional	99.49
COG1554		772	ATH1 Trehalose and maltose hydrolases (possible ph	99.4
PF10222		604	DUF2152: Uncharacterized conserved protein (DUF215	98.25
PF03632		370	Glyco_hydro_65m: Glycosyl hydrolase family 65 cent	97.47
KOG4125		682	consensus Acid trehalase [Carbohydrate transport a	97.4
PF03636		255	Glyco_hydro_65N: Glycosyl hydrolase family 65, N-t	87.73

>PF14498 Glyco_hyd_65N_2: Glycosyl hydrolase family 65, N-terminal domain; PDB: 2EAE_A 2EAB_B 2EAC_A 2EAD_B 2RDY_A	Back alignment and domain information

Probab=100.00  E-value=2.9e-55  Score=429.63  Aligned_cols=231  Identities=41%  Similarity=0.731  Sum_probs=190.8

Q ss_pred             EEEcCCCCCcccccccccCccceeeecCCceeEEEEeccceecCCCCCCCCCCchhhHHHHHHHHHcCChHHHHHHHHhh
Q 010926           15 ITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAASVKL   94 (497)
Q Consensus        15 l~~~~PA~~W~ealplGNGrlGamv~G~~~~e~i~lne~tlWsg~p~~~~~~~~~~~l~~iR~ll~~g~~~~A~~l~~~~   94 (497)
                      |||++||..|+||||||||||||||||+|.+|+|+|||+|||||+|.+..+++.++.|++||+++++|||++|++|++++
T Consensus         1 Lwy~~PA~~W~ealPiGNG~lGamv~G~~~~E~i~lNe~tlWsg~p~~~~~~~~~~~L~~iR~l~~~g~~~~A~~l~~~~   80 (236)
T PF14498_consen    1 LWYDKPASDWEEALPIGNGRLGAMVYGGPAKERIQLNEDTLWSGGPSDRTPPDAAEYLPEIRELLFEGDYEEAEELAEEN   80 (236)
T ss_dssp             EEESS-GCCHHHSEEEESSSEEEEE---SSEEEEEEEETT-BSSSTTSSSSHHHHHHHHHHHHHHHTT-CCHHHHHHCCS
T ss_pred             CccCChhhhhhhhcEecCccceEEecCCCCeEEEEEcchheECCCCccccCccHHHHHHHHHHHHHcCChhHHHHHHHHh
Confidence            89999999999999999999999999999999999999999999999888888899999999999999999999999876


Q ss_pred             cC-CCC-CCCCCceeEEEEecCCCCccccCCeEEEEeccCcEEEEEEEeCCEEEEEEEEeecCCCEEEEEEEcCCCCceE
Q 010926           95 FG-HPA-DVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLS  172 (497)
Q Consensus        95 ~g-~~~-~~y~p~G~l~l~~~~~~~~~~~~~Y~R~LDl~~a~~~v~~~~~g~~~~r~~FvS~pd~Viv~~l~~~~~~~l~  172 (497)
                      ++ .+. ++|||+|+|.|++......  +++|+|+|||++|+++|+|+.+|+.|+|++|||+||+|||+||+++++++++
T Consensus        81 ~~~~~~~~~y~p~g~L~i~~~~~~~~--~~~Y~R~LDl~~a~~~v~~~~~g~~~~re~FaS~pd~viv~r~~~~~~~~l~  158 (236)
T PF14498_consen   81 FGGEPGYGSYQPLGDLYIDFFPDAGD--VSDYRRELDLETAVATVSYTDGGVRYRREYFASRPDDVIVIRISASKPGGLN  158 (236)
T ss_dssp             -B---HH--B---EEEEEEESSSS-----CEEEEEEETTTTEEEEEEEETTEEEEEEEEEETTTTEEEEEEEESSTT-EE
T ss_pred             ccCCCccccCCcceEEEEEEeCCCCC--CCcEEEEEEccCcEEEEEEEECCEEEEEEEEEECCCCEEEEEEEcCCCCcEE
Confidence            54 333 7899999999995433334  5699999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEccCCC--CcccccCCceEEEEEecCCCCCCCCCCCCCCCCCceEEEEEEEEEeCCCcEEEEecCCeEEEeCCcEE
Q 010926          173 FNVSLDSLLD--NHSYVNGNNQIIMEGRCPGKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKVEGSDWA  250 (497)
Q Consensus       173 ~~i~l~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~f~~~~~v~~~g~~G~v~~~~~~~l~v~~a~~v  250 (497)
                      ++++|.++..  ......+++.+.++|++|            ..+|++|+++++|+.+|  |+|+ ..+++|+|++|++|
T Consensus       159 ~~l~l~~~~~~~~~~~~~~~~~l~~~g~~~------------~~~g~~~~~~~~v~~~g--G~v~-~~~~~l~v~~A~~v  223 (236)
T PF14498_consen  159 LTLSLDRPLRTRSAVVTAGGGTLTLRGQAP------------GDNGMRFAGRVRVVATG--GTVT-ADGGGLRVEGADEV  223 (236)
T ss_dssp             EEEEEEBSTTSCEEEEEEETTEEEEEEEE-------------TTTS-EEEEEEEEEECC--CECE-CCTTCEEEEEESEE
T ss_pred             EEEEecCCcccccceEeecCCEEEEEEEeC------------CCCCeEEEEEEEEEeCC--CEEE-eeCCEEEEeCCCEE
Confidence            9999999863  333345678999999985            24799999999997665  8885 46779999999999


Q ss_pred             EEEEEeeecCCC
Q 010926          251 VLLLVASSSFDG  262 (497)
Q Consensus       251 ~l~~~~~t~y~~  262 (497)
                      +|++++.|+|++
T Consensus       224 ~l~~~~~T~y~~  235 (236)
T PF14498_consen  224 TLYVSAATDYRG  235 (236)
T ss_dssp             EEEEEEEESEET
T ss_pred             EEEEEEEecCCC
Confidence            999999999974

>PRK13807 maltose phosphorylase; Provisional	Back alignment and domain information

>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF10222 DUF2152: Uncharacterized conserved protein (DUF2152); InterPro: IPR018795 This entry includes mainly uncharacterised proteins, though some are described as belonging to the glycoside hydrolase family 65	Back alignment and domain information

>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF03636 Glyco_hydro_65N: Glycosyl hydrolase family 65, N-terminal domain ; InterPro: IPR005196 O-Glycosyl hydrolases 3	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		497
2rdy_A		803	Crystal Structure Of A Putative Glycoside Hydrolase		2e-97
2eae_A		898	Crystal Structure Of 1,2-A-L-Fucosidase From Bifido		6e-46
2eab_A		899	Crystal Structure Of 1,2-A-L-Fucosidase From Bifido		6e-46
2ead_A		899	Crystal Structure Of 1,2-A-L-Fucosidase From Bifido		6e-46

>pdb|2RDY|A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans Length = 803

Back alignment and structure

Iteration: 1

Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 200/485 (41%), Positives = 269/485 (55%), Gaps = 35/485 (7%) Query: 13 LKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKAL 72 LKI F+ PA +T+A+PIGNG LGA V+G V E + LNEDTLW+G P D+ NP A + L Sbjct: 3 LKIQFDFPASFWTEALPIGNGNLGAXVFGKVEKERIALNEDTLWSGYPKDWNNPKAKEVL 62 Query: 73 SDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNT 132 VR L+ +Y EA S G Y GD+ + D H + Y RELDL+T Sbjct: 63 PKVRELIAQEKYEEADQLSRDXXGPYTQSYLPFGDLNIFXD--HGQVVAPHYHRELDLST 120 Query: 133 ATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNNQ 192 V Y++G V++TRE F + PD+ IV +++ S+ G LSF LDSLL + S V G Sbjct: 121 GIVTVTYTIGGVQYTRELFVTYPDRAIVVRLTASKEGFLSFRAKLDSLLRHVSSV-GAEH 179 Query: 193 IIMEGRCP--------GKRIPPKANANDDPKGIQFSAILEIKISDDRGTISALEDKKLKV 244 + G P + P + D +G F L + + G ++ L V Sbjct: 180 YTISGTAPEHVSPSYYDEENPVRYGHPDXSQGXTFHGRL---AAVNEGGSLKVDADGLHV 236 Query: 245 EGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKL 304 G+ A L AS+SFD P S ++DP+ ++ +++I Y ++ RHL+DY KL Sbjct: 237 XGATCATLYFSASTSFD-PSTGASCLERDPSLRTIETIKAICKRGYKEIVNRHLEDYTKL 295 Query: 305 FHRVSIQLSRS--PKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLI 362 F+RVS+ L S P D TD +R+K + + D LVELLFQ+GRYL I Sbjct: 296 FNRVSLHLGESIAPADXSTD-------------QRIKEYGS-RDLGLVELLFQYGRYLXI 341 Query: 363 SSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYL 422 +SSRPGTQ ANLQGIWNE+ W S +NIN E NYW + CNL+E +PL F+ L Sbjct: 342 ASSRPGTQPANLQGIWNEETRAPWSSNYTLNINAEXNYWPAETCNLAELHKPLIHFIERL 401 Query: 423 SINGSKTAQVNYLASGWVIHHKTDIWAKSSA----DRGKVVWALWPMGGAWLCTHLWEHY 478 + NG KTA++NY A GWV HH D+W +++ G VWA WP GG WL HLWEHY Sbjct: 402 AANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPXGGVWLTQHLWEHY 461 Query: 479 NYTMD 483 + D Sbjct: 462 TFGED 466

PyMOL of 2rdy

>pdb|2EAE|A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products Length = 898

Back alignment and structure

>pdb|2EAB|A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) Length = 899

Back alignment and structure

>pdb|2EAD|A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate Length = 899

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		497
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	1e-138
2eab_A		899	Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi	1e-115
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Length = 803	Back alignment and structure

 Score =  417 bits (1073), Expect = e-138
 Identities = 198/485 (40%), Positives = 270/485 (55%), Gaps = 31/485 (6%)

Query: 12  PLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKA 71
            LKI F+ PA  +T+A+PIGNG LGAMV+G V  E + LNEDTLW+G P D+ NP A + 
Sbjct: 2   SLKIQFDFPASFWTEALPIGNGNLGAMVFGKVEKERIALNEDTLWSGYPKDWNNPKAKEV 61

Query: 72  LSDVRSLVDSGQYAEATAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLN 131
           L  VR L+   +Y EA   S  + G     Y   GD+ +  D   +      Y RELDL+
Sbjct: 62  LPKVRELIAQEKYEEADQLSRDMMGPYTQSYLPFGDLNIFMDHGQVVAPH--YHRELDLS 119

Query: 132 TATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHSYVNGNN 191
           T    V Y++G V++TRE F + PD+ IV +++ S+ G LSF   LDSLL + S V G  
Sbjct: 120 TGIVTVTYTIGGVQYTRELFVTYPDRAIVVRLTASKEGFLSFRAKLDSLLRHVSSV-GAE 178

Query: 192 QIIMEGRCPGKRIPPKANAN--------DDPKGIQFSAILEIKISDDRGTISALEDKKLK 243
              + G  P    P   +          D  +G+ F   L        G++   +   L 
Sbjct: 179 HYTISGTAPEHVSPSYYDEENPVRYGHPDMSQGMTFHGRLAAVNEG--GSLKV-DADGLH 235

Query: 244 VEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQK 303
           V G+  A L   AS+SFD P    S  ++DP+  ++  +++I    Y ++  RHL+DY K
Sbjct: 236 VMGATCATLYFSASTSFD-PSTGASCLERDPSLRTIETIKAICKRGYKEIVNRHLEDYTK 294

Query: 304 LFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLIS 363
           LF+RVS+ L  S                + + +R+K + +  D  LVELLFQ+GRYL+I+
Sbjct: 295 LFNRVSLHLGESIAP-----------ADMSTDQRIKEYGS-RDLGLVELLFQYGRYLMIA 342

Query: 364 SSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLS 423
           SSRPGTQ ANLQGIWNE+    W S   +NIN EMNYW +  CNL+E  +PL  F+  L+
Sbjct: 343 SSRPGTQPANLQGIWNEETRAPWSSNYTLNINAEMNYWPAETCNLAELHKPLIHFIERLA 402

Query: 424 INGSKTAQVNYLASGWVIHHKTDIWAKSSA----DRGKVVWALWPMGGAWLCTHLWEHYN 479
            NG KTA++NY A GWV HH  D+W +++       G  VWA WPMGG WL  HLWEHY 
Sbjct: 403 ANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPMGGVWLTQHLWEHYT 462

Query: 480 YTMDR 484
           +  D 
Sbjct: 463 FGEDE 467

PyMOL of 2rdy

>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* Length = 899	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		497
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	100.0
2eab_A		899	Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi	100.0
1h54_A		754	Maltose phosphorylase; hydrolase, maltose metaboli	100.0
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	95.33

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=7.5e-101  Score=865.71  Aligned_cols=461  Identities=43%  Similarity=0.772  Sum_probs=406.4

Q ss_pred             CceEEEcCCCCCcccccccccCccceeeecCCceeEEEEeccceecCCCCCCCCCCchhhHHHHHHHHHcCChHHHHHHH
Q 010926           12 PLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAAS   91 (497)
Q Consensus        12 ~~~l~~~~PA~~W~ealplGNGrlGamv~G~~~~e~i~lne~tlWsg~p~~~~~~~~~~~l~~iR~ll~~g~~~~A~~l~   91 (497)
                      +++|||++||+.|+||||||||||||||||++..|+|+|||+|||+|+|.+..+|++.+.|++||+++++|++.+|++++
T Consensus         2 ~~~lwy~~Pa~~w~eaLpiGNG~lGamv~G~~~~e~i~lne~tlW~g~p~~~~~~~~~~~l~~ir~~~~~g~~~~A~~l~   81 (803)
T 2rdy_A            2 SLKIQFDFPASFWTEALPIGNGNLGAMVFGKVEKERIALNEDTLWSGYPKDWNNPKAKEVLPKVRELIAQEKYEEADQLS   81 (803)
T ss_dssp             -CEEEESSCCSSGGGSEEEECSSEEEEECCCSSEEEEEEEETTCBSSCSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             CcceEeCCcccchhhhceecCCceeEEecCCCCeEEEEEcCCccCcCCCCCCCCcchHHHHHHHHHHHHCCChHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HhhcCCCCCCCCCceeEEEEecCCCCccccCCeEEEEeccCcEEEEEEEeCCEEEEEEEEeecCCCEEEEEEEcCCCCce
Q 010926           92 VKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSL  171 (497)
Q Consensus        92 ~~~~g~~~~~y~p~G~l~l~~~~~~~~~~~~~Y~R~LDl~~a~~~v~~~~~g~~~~r~~FvS~pd~Viv~~l~~~~~~~l  171 (497)
                      +.++|+..++|||+|+|.|+|++....  +++|+|+|||++|+++|+|+.+|+.|+|++|||+||+|||+||++++++++
T Consensus        82 ~~~~~~~~~~y~~lG~l~l~~~~~~~~--~~~y~r~LDl~~a~~~~~~~~~g~~~~re~f~s~~d~viv~~l~a~~~~~~  159 (803)
T 2rdy_A           82 RDMMGPYTQSYLPFGDLNIFMDHGQVV--APHYHRELDLSTGIVTVTYTIGGVQYTRELFVTYPDRAIVVRLTASKEGFL  159 (803)
T ss_dssp             TTSCCCCCCCBCCCEEEEEEESSCSCC--CSCCEEEEETTTTEEEEEEEETTEEEEEEEEEETTTTEEEEEEEESSTTCE
T ss_pred             HHhccCCCCCccccEEEEEecCCCCCC--ccceeEEEEccceEEEEEEEECCEEEEEEEEEecCCCEEEEEEecCCCCcE
Confidence            546677788999999999999642213  569999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEccCCCCcccccCCceEEEEEecCCCCCCCCC--------CCCCCCCCceEEEEEEEEEeCCCcEEEEecCCeEE
Q 010926          172 SFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKA--------NANDDPKGIQFSAILEIKISDDRGTISALEDKKLK  243 (497)
Q Consensus       172 ~~~i~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~g~~f~~~~~v~~~g~~G~v~~~~~~~l~  243 (497)
                      +|+++|.++......+ +++.+++.|+.+....+.+.        ......+|++|+++++|...|  |+++.. +++|+
T Consensus       160 ~~~~~l~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~v~~~g--g~~~~~-~~~l~  235 (803)
T 2rdy_A          160 SFRAKLDSLLRHVSSV-GAEHYTISGTAPEHVSPSYYDEENPVRYGHPDMSQGMTFHGRLAAVNEG--GSLKVD-ADGLH  235 (803)
T ss_dssp             EEEEEEECSSCCEEEC---CCEEEEEECCSEECCTTCCCSSCEECCCTTTCCSCEEEEEEEEEEES--SEEEEE-TTEEE
T ss_pred             EEEEEeccCCCCceee-cCCEEEEEEEcCCCCccccccccccccccccCCCCCeEEEEEEEEEeCC--cEEEec-CCEEE
Confidence            9999999876544322 46688899998753211100        011234789999999987655  788764 45899


Q ss_pred             EeCCcEEEEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcceeEEecCCCCCCcccc
Q 010926          244 VEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDT  323 (497)
Q Consensus       244 v~~a~~v~l~~~~~t~y~~~~~~~~~~~~~~~~~~~~~l~~a~~~~y~~L~~~H~~~~~~l~~R~~l~L~~~~~~~~~~~  323 (497)
                      |++|++|+|++++.|+|+.... ..+.+.|+.+.|.+.|++|..++|++|+++|+++|++||+|++|+|++++.      
T Consensus       236 v~~a~~~~l~~~~~T~~~~~~~-~~~~~~d~~~~a~~~l~~a~~~~y~~L~~~H~~~w~~~w~r~~i~l~g~~~------  308 (803)
T 2rdy_A          236 VMGATCATLYFSASTSFDPSTG-ASCLERDPSLRTIETIKAICKRGYKEIVNRHLEDYTKLFNRVSLHLGESIA------  308 (803)
T ss_dssp             EEEESEEEEEEEEEESEETTTT-EECTTCCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTCEEECCCCCS------
T ss_pred             EECCcEEEEEEEEeecCCCccc-ccccCCCHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHhhCceEEEeCCCcc------
Confidence            9999999999999999975311 012246788999999999989999999999999999999999999986532      


Q ss_pred             CCcCCCCCCCHHHHHHhcCCCCChHHHHHHHHhhhHhhhhcCCCCCCCCCCcccCCCCCCCCCCCCCccccccccccccc
Q 010926          324 CSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQS  403 (497)
Q Consensus       324 ~~~~~~~~~pt~~rl~~~~~~~d~~L~~l~f~~GRYLLissSR~g~lP~nLQGiWn~~~~ppW~sdY~~NiN~QMnYW~a  403 (497)
                           ...+|||+||++|+.+ ||+|+++||+|||||||||||+|++|+|||||||+++.|+|+|+||+|||+||||||+
T Consensus       309 -----~~~~~td~rl~~~~~~-d~~l~~l~~~~~rYlL~sssr~g~~P~~LqGlw~~~~~~~W~g~y~~n~N~em~ywP~  382 (803)
T 2rdy_A          309 -----PADMSTDQRIKEYGSR-DLGLVELLFQYGRYLMIASSRPGTQPANLQGIWNEETRAPWSSNYTLNINAEMNYWPA  382 (803)
T ss_dssp             -----CTTCCHHHHHHHHGGG-SHHHHHHHHHHHHHHHHHHCCTTSCCCBTTBTCCCCTTCGGGGCEETTTHHHHHTTTT
T ss_pred             -----cccCChHHHHHHhccC-CHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccCCCCCCCCCCccceeehhhhhhHhhh
Confidence                 3579999999999877 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCChhhhhHHHHHHHHHhhHhhHHHHHHhcCCccEEEecccCCCCCcCCCC----CCCccccccchHHHHHHHHHHHhc
Q 010926          404 LPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADR----GKVVWALWPMGGAWLCTHLWEHYN  479 (497)
Q Consensus       404 ~~~nl~E~~~pl~~~~~~l~~~gr~tA~~~Yg~~G~~~h~~td~wg~t~p~~----~~~~~~~w~~g~aWl~~~lwehY~  479 (497)
                      +.+|+|||++||++|+.++++.+|++||++||++||++||++|+|+.+.|.+    +.++|++||++++|+|+|+|+||+
T Consensus       383 ~~~n~pE~~~~ll~y~~~~l~~ar~~A~~~~G~~Ga~~p~~td~w~~~~p~g~~G~~~~~~~~w~~~~awla~~lw~yy~  462 (803)
T 2rdy_A          383 ETCNLAELHKPLIHFIERLAANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPMGGVWLTQHLWEHYT  462 (803)
T ss_dssp             TTTTCGGGGHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCSEECTTCCCSCCSGGGTSCHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEeeccccccccCCccccCCCCcccccccchHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998852    345689999999999999999999


Q ss_pred             ccCCHHhHhhcc
Q 010926          480 YTMDRVRFLFSI  491 (497)
Q Consensus       480 yT~D~~fL~~~~  491 (497)
                      ||+|++||+++.
T Consensus       463 ~TgD~~fL~~~~  474 (803)
T 2rdy_A          463 FGEDEAYLRDTA  474 (803)
T ss_dssp             HHCCHHHHHHTH
T ss_pred             hhCCHHHHHhhc
Confidence            999999999874

PyMOL of 2rdy

>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*	Back alignment and structure

>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		497
d1h54a1		485	a.102.1.4 (A:269-753) Lactobacillus maltose phosph	8e-33

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Length = 485	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Lactobacillus maltose phosphorylase, central domain
species: Lactobacillus brevis [TaxId: 1580]

 Score =  128 bits (322), Expect = 8e-33
 Identities = 24/219 (10%), Positives = 55/219 (25%), Gaps = 44/219 (20%)

Query: 269 DSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEEN 328
           D+++  T+        +   SY DL   H   + + + +  + +    +           
Sbjct: 1   DTQESLTAAMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGDDES---------- 50

Query: 329 IDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANL--QGIWNEDLSPTW 386
                                 +   +F  + L S+        N+  +G   E     +
Sbjct: 51  ----------------------QQGIRFNLFQLFSTYYGEDARLNIGPKGFTGEK----Y 84

Query: 387 DSAPHVNINLEMNYWQS-LPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKT 445
                   + E   +   L     +    L  +           AQ   L  G +    T
Sbjct: 85  G--GATYWDTEAFAFPVYLGITDPKVTRNLLMYRYKQLDGAYINAQEQGLK-GALFPMVT 141

Query: 446 DIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDR 484
               +   +    +          +   ++ +  YT D 
Sbjct: 142 FDGIECHNEWE--ITFEEIHRNGDIAFAIYNYTRYTGDD 178

PyMOL of d1h54a1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		497
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	99.96
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	96.9
d1h54a2		268	Lactobacillus maltose phosphorylase, N-terminal do	90.56

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Lactobacillus maltose phosphorylase, central domain
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.96  E-value=5e-31  Score=279.23  Aligned_cols=177  Identities=13%  Similarity=0.035  Sum_probs=150.7

Q ss_pred             hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcceeEEecCCCCCCccccCCcCCCCCCCHHHHHHhcCCCCChHHHHHH
Q 010926          274 PTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTDEDPSLVELL  353 (497)
Q Consensus       274 ~~~~~~~~l~~a~~~~y~~L~~~H~~~~~~l~~R~~l~L~~~~~~~~~~~~~~~~~~~~pt~~rl~~~~~~~d~~L~~l~  353 (497)
                      +.+++.+.+++|.+++|++|+++|+++|++||+|++|+|+++                               + ..+.+
T Consensus         6 ~~~~~~~~~~~a~~~~y~~L~~~h~~~w~~~~~r~~i~l~~d-------------------------------~-~l~~~   53 (485)
T d1h54a1           6 LTAAMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGD-------------------------------D-ESQQG   53 (485)
T ss_dssp             HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCEEEESC-------------------------------H-HHHHH
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCceEEeCCC-------------------------------H-HHHHH
Confidence            344556678889999999999999999999999999999742                               1 23357


Q ss_pred             HHhhhHhhhhcCCCCCCCCCC--cccCCCCCCCCCCCCCccccccccccccccC-CChhhhhHHHHHHHHHhhHhhHHHH
Q 010926          354 FQFGRYLLISSSRPGTQVANL--QGIWNEDLSPTWDSAPHVNINLEMNYWQSLP-CNLSECQEPLFDFLTYLSINGSKTA  430 (497)
Q Consensus       354 f~~GRYLLissSR~g~lP~nL--QGiWn~~~~ppW~sdY~~NiN~QMnYW~a~~-~nl~E~~~pl~~~~~~l~~~gr~tA  430 (497)
                      |+++||+|+||||++..|.+|  ||+|++.    |.+.++  .|+||+|||... +|+|||+.|+++|+.++++.+|++|
T Consensus        54 ~~~~~Y~l~~s~~~~~~~~~~~~~Gl~~~~----~~G~~~--wd~~~~~~p~~l~~~~pe~~~~~~~~~~~~l~~ar~~A  127 (485)
T d1h54a1          54 IRFNLFQLFSTYYGEDARLNIGPKGFTGEK----YGGATY--WDTEAFAFPVYLGITDPKVTRNLLMYRYKQLDGAYINA  127 (485)
T ss_dssp             HHHHHHHHHHHCCSSCTTCCCCTTTTSCCT----TCSSBC--THHHHTHHHHHHHHSCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCCCCCCC----CCCccc--hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999888887  9999854    666544  479999999975 6999999999999999999999999


Q ss_pred             HHhcCCccEEEecccCCCCCcCCCCCCCccccccchHHHHHHHHHHHhcccCCHHhHhhcc
Q 010926          431 QVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRVRFLFSI  491 (497)
Q Consensus       431 ~~~Yg~~G~~~h~~td~wg~t~p~~~~~~~~~w~~g~aWl~~~lwehY~yT~D~~fL~~~~  491 (497)
                      ++ |||+|++.|+.++.++...+.  .+.+..+...++|+++++|+||+||+|++||+++.
T Consensus       128 ~~-~g~~G~~~p~~~~~~~~~~~~--~~~~~~~~~~~~wi~~~~~~yy~~TgD~~~L~e~~  185 (485)
T d1h54a1         128 QE-QGLKGALFPMVTFDGIECHNE--WEITFEEIHRNGDIAFAIYNYTRYTGDDSYVLHEG  185 (485)
T ss_dssp             HT-TTCCSCCCCSSBSSSSBCCCC--HHHHTTCTHHHHHHHHHHHHHHHHHCCCTTTTTHH
T ss_pred             HH-hccCCCccceeCCCCCCCCCC--CCCcccccccchHHHHHHHHHHHhcCcHHHHHhcc
Confidence            97 899999999999888776542  23445667788999999999999999999999985

PyMOL of d1h54a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d1h54a2 b.30.5.3 (A:1-268) Lactobacillus maltose phosphorylase, N-terminal domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure