Citrus Sinensis ID: 010950
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | 2.2.26 [Sep-21-2011] | |||||||
| O64765 | 502 | Probable UDP-N-acetylgluc | no | no | 0.997 | 0.988 | 0.805 | 0.0 | |
| Q91YN5 | 522 | UDP-N-acetylhexosamine py | yes | no | 0.921 | 0.877 | 0.424 | 1e-100 | |
| Q28CH3 | 511 | UDP-N-acetylhexosamine py | yes | no | 0.901 | 0.876 | 0.434 | 1e-100 | |
| Q16222 | 522 | UDP-N-acetylhexosamine py | yes | no | 0.913 | 0.869 | 0.417 | 1e-97 | |
| Q7ZWD4 | 505 | UDP-N-acetylhexosamine py | no | no | 0.913 | 0.899 | 0.416 | 5e-97 | |
| Q54GN5 | 487 | Probable UDP-N-acetylgluc | yes | no | 0.913 | 0.932 | 0.393 | 3e-91 | |
| Q3KQV9 | 507 | UDP-N-acetylhexosamine py | no | no | 0.923 | 0.905 | 0.416 | 4e-91 | |
| Q3TW96 | 507 | UDP-N-acetylhexosamine py | no | no | 0.808 | 0.792 | 0.433 | 3e-88 | |
| O74933 | 486 | UDP-N-acetylglucosamine p | N/A | no | 0.911 | 0.932 | 0.383 | 7e-88 | |
| P43123 | 477 | UDP-N-acetylglucosamine p | yes | no | 0.877 | 0.914 | 0.397 | 3e-86 |
| >sp|O64765|UAP1_ARATH Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis thaliana GN=At2g35020 PE=2 SV=1 | Back alignment and function desciption |
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Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/503 (80%), Positives = 448/503 (89%), Gaps = 7/503 (1%)
Query: 1 MREPTVVGTESNGGSVGSIAQ------SPPPQALLERLKDYGQEDAFALWDELSPDERDH 54
M+EPT E +V +I + P QAL+ERLKDYGQED F+LWDELSP+ERD
Sbjct: 1 MKEPTT-EIEIETSAVATILPPPLPPTASPHQALVERLKDYGQEDVFSLWDELSPEERDL 59
Query: 55 LVKDIESLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKA 114
L++DIE+LDLPR+DRIIRCSL SQGLPVAAIEPVPE VSTVEERT ++RE+WWKMGLKA
Sbjct: 60 LLRDIENLDLPRIDRIIRCSLHSQGLPVAAIEPVPENCVSTVEERTKEDREKWWKMGLKA 119
Query: 115 ISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEG 174
I +GKL V+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQ+QAERILCVQRLA+Q SE
Sbjct: 120 IYEGKLGVVLLSGGQGTRLGSSDPKGCYNIGLPSGKSLFQIQAERILCVQRLASQAMSEA 179
Query: 175 GGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET 234
+ I WYIMTSPFT + T+K+F+ HKYFGLE DQVTFFQQGT+PC+SKDG+FIMET
Sbjct: 180 SPTRPVTIQWYIMTSPFTHEPTQKFFKSHKYFGLEPDQVTFFQQGTLPCISKDGKFIMET 239
Query: 235 PYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKG 294
P+ ++KAPDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDN LVRVADPTFLGYFIDK
Sbjct: 240 PFSLSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKS 299
Query: 295 VSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354
++ AKVVRKAYPQEKVGVFVRRGKGGPLTVVEY+ELD S+ASA NQ+TGRL++CWSNVC
Sbjct: 300 AASAAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYTELDQSMASATNQQTGRLQYCWSNVC 359
Query: 355 LHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEV 414
LHMFTLDFLNQVANGLEKDSVYHLAEKKIPSI+G VG KLEQFIFD FPYAPSTALFEV
Sbjct: 360 LHMFTLDFLNQVANGLEKDSVYHLAEKKIPSINGDIVGLKLEQFIFDCFPYAPSTALFEV 419
Query: 415 LREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCS 474
LREEEFAPVKNANGSN+DTP+SARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCS
Sbjct: 420 LREEEFAPVKNANGSNYDTPESARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCS 479
Query: 475 YAGENLEAICRGRTFHAPCEIGF 497
YAGENLEAICRGRTFHAPCEI
Sbjct: 480 YAGENLEAICRGRTFHAPCEISL 502
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 2EC: 3 |
| >sp|Q91YN5|UAP1_MOUSE UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus GN=Uap1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q28CH3|UAP1L_XENTR UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus tropicalis GN=uap1l1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q7ZWD4|UAP1L_DANRE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio rerio GN=uap1l1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q54GN5|UAP1_DICDI Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium discoideum GN=uap1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q3KQV9|UAP1L_HUMAN UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Homo sapiens GN=UAP1L1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q3TW96|UAP1L_MOUSE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus GN=Uap1l1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O74933|UAP1_CANAX UDP-N-acetylglucosamine pyrophosphorylase OS=Candida albicans GN=UAP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P43123|UAP1_YEAST UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QRI1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | ||||||
| 217074416 | 492 | unknown [Medicago truncatula] gi|3884973 | 0.989 | 1.0 | 0.859 | 0.0 | |
| 356512205 | 490 | PREDICTED: probable UDP-N-acetylglucosam | 0.985 | 1.0 | 0.877 | 0.0 | |
| 449433495 | 503 | PREDICTED: probable UDP-N-acetylglucosam | 0.939 | 0.928 | 0.895 | 0.0 | |
| 225423637 | 485 | PREDICTED: probable UDP-N-acetylglucosam | 0.951 | 0.975 | 0.900 | 0.0 | |
| 356524976 | 490 | PREDICTED: probable UDP-N-acetylglucosam | 0.985 | 1.0 | 0.871 | 0.0 | |
| 297823295 | 498 | UTP--glucose-1-phosphate uridylyltransfe | 1.0 | 0.997 | 0.823 | 0.0 | |
| 295126562 | 505 | UTP:N-acetylglucosamine-1-P uridylyltran | 0.955 | 0.940 | 0.842 | 0.0 | |
| 30692244 | 505 | N-acetylglucosamine-1-phosphate uridylyl | 0.955 | 0.940 | 0.842 | 0.0 | |
| 15226877 | 502 | putative UDP-N-acetylglucosamine pyropho | 0.997 | 0.988 | 0.805 | 0.0 | |
| 21593885 | 502 | putative UDP-N-acetylglucosamine pyropho | 0.997 | 0.988 | 0.805 | 0.0 |
| >gi|217074416|gb|ACJ85568.1| unknown [Medicago truncatula] gi|388497374|gb|AFK36753.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/497 (85%), Positives = 461/497 (92%), Gaps = 5/497 (1%)
Query: 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
MREP+ E+NGG V SPPPQALLERLKDYGQED F+LWDELS +ERD LVKDIE
Sbjct: 1 MREPSTAIIETNGGGV----SSPPPQALLERLKDYGQEDVFSLWDELSNEERDFLVKDIE 56
Query: 61 SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
SLDL R+DRIIRCSLRSQGLP AAIEPVPE +VS VEER+ +ERERWWKMGLKAISDGK+
Sbjct: 57 SLDLSRIDRIIRCSLRSQGLPAAAIEPVPESNVSKVEERSQEERERWWKMGLKAISDGKV 116
Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
AVLLLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAA T+E S S
Sbjct: 117 AVLLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAHATNESSAS-SV 175
Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
IHWYIMTSPFTD+ATRK+FE HKYFGL+++QVTFF+QGTIPCVSKDGR I+ETPY+VAK
Sbjct: 176 QIHWYIMTSPFTDEATRKFFESHKYFGLDAEQVTFFRQGTIPCVSKDGRIILETPYRVAK 235
Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
APDGNGGVYSALKS+KLLEDMA++GIKY+DCYGVDNALVRVADP+F+GYFIDKGV+A AK
Sbjct: 236 APDGNGGVYSALKSTKLLEDMASKGIKYVDCYGVDNALVRVADPSFIGYFIDKGVTAAAK 295
Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTL 360
VVRKAYPQEKVGVFV+RGKGGPLTVVEYSELDPSLASA+NQ TGRLRFCWSNVCLHMFTL
Sbjct: 296 VVRKAYPQEKVGVFVQRGKGGPLTVVEYSELDPSLASAVNQTTGRLRFCWSNVCLHMFTL 355
Query: 361 DFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEF 420
DFLNQVANGLEKDS+YHLAEKKIPSIHG T+G KLEQFIFDAFPYAP+TALFEVLREEEF
Sbjct: 356 DFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPTTALFEVLREEEF 415
Query: 421 APVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENL 480
APVKNANGSN+DTPDSA++LV RLHTRWV+AAGGFLTHSVPLYATGVEVSPLCSYAGENL
Sbjct: 416 APVKNANGSNYDTPDSAKMLVFRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENL 475
Query: 481 EAICRGRTFHAPCEIGF 497
E ICRGRTFHAPCEI F
Sbjct: 476 EPICRGRTFHAPCEISF 492
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512205|ref|XP_003524811.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449433495|ref|XP_004134533.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] gi|449490659|ref|XP_004158669.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225423637|ref|XP_002276048.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase [Vitis vinifera] gi|297738002|emb|CBI27203.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356524976|ref|XP_003531103.1| PREDICTED: probable UDP-N-acetylglucosamine pyrophosphorylase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297823295|ref|XP_002879530.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325369|gb|EFH55789.1| UTP--glucose-1-phosphate uridylyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|295126562|gb|ADF80194.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-1 [synthetic construct] | Back alignment and taxonomy information |
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| >gi|30692244|ref|NP_564372.3| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|15450739|gb|AAK96641.1| At1g31070/F17F8_1 [Arabidopsis thaliana] gi|332193190|gb|AEE31311.1| N-acetylglucosamine-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15226877|ref|NP_181047.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|6136087|sp|O64765.1|UAP1_ARATH RecName: Full=Probable UDP-N-acetylglucosamine pyrophosphorylase gi|18087511|gb|AAL58890.1|AF462794_1 At2g35020/F19I3.25 [Arabidopsis thaliana] gi|3033397|gb|AAC12841.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] gi|56382033|gb|AAV85735.1| At2g35020 [Arabidopsis thaliana] gi|295126564|gb|ADF80195.1| UTP:N-acetylglucosamine-1-P uridylyltransferase-2 [Arabidopsis thaliana] gi|330253956|gb|AEC09050.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21593885|gb|AAM65852.1| putative UDP-N-acetylglucosamine pyrophosphorylase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 497 | ||||||
| TAIR|locus:2015791 | 505 | GlcNAc1pUT1 "N-acetylglucosami | 0.951 | 0.936 | 0.829 | 9.4e-217 | |
| TAIR|locus:2044787 | 502 | GlcNAc1pUT2 "N-acetylglucosami | 0.993 | 0.984 | 0.788 | 2.2e-215 | |
| UNIPROTKB|G4MYL3 | 504 | MGG_15671 "Uncharacterized pro | 0.943 | 0.930 | 0.42 | 4.5e-91 | |
| ASPGD|ASPL0000037237 | 505 | ungA [Emericella nidulans (tax | 0.917 | 0.902 | 0.418 | 1.5e-90 | |
| MGI|MGI:1334459 | 522 | Uap1 "UDP-N-acetylglucosamine | 0.839 | 0.798 | 0.437 | 3.4e-90 | |
| UNIPROTKB|F1P7W7 | 522 | UAP1 "Uncharacterized protein" | 0.832 | 0.793 | 0.440 | 1.5e-89 | |
| UNIPROTKB|F1MJP7 | 522 | UAP1 "Uncharacterized protein" | 0.832 | 0.793 | 0.443 | 1.5e-89 | |
| UNIPROTKB|F1S210 | 521 | UAP1 "Uncharacterized protein" | 0.832 | 0.794 | 0.440 | 1.9e-89 | |
| UNIPROTKB|Q16222 | 522 | UAP1 "UDP-N-acetylhexosamine p | 0.830 | 0.791 | 0.432 | 5.6e-88 | |
| ZFIN|ZDB-GENE-030131-1233 | 504 | uap1 "UDP-N-acteylglucosamine | 0.877 | 0.865 | 0.420 | 2e-86 |
| TAIR|locus:2015791 GlcNAc1pUT1 "N-acetylglucosamine-1-phosphate uridylyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2094 (742.2 bits), Expect = 9.4e-217, P = 9.4e-217
Identities = 393/474 (82%), Positives = 428/474 (90%)
Query: 22 SPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGLP 81
S P QAL+ERLKDYGQED F+LWDELSPDE+D LV+DIE+LDLPR+DRIIRCSL SQGLP
Sbjct: 31 SSPRQALVERLKDYGQEDIFSLWDELSPDEKDFLVRDIENLDLPRIDRIIRCSLHSQGLP 90
Query: 82 VAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGC 141
VAAIEPVPE VSTV+ RTM++RE+WWKMGLK I +GKL V+LLSGGQGTRLGSSDPKGC
Sbjct: 91 VAAIEPVPENWVSTVDGRTMEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGC 150
Query: 142 VNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE 201
NIGLPSGKSLFQ+QAERILCVQRLAAQV SEG IHWYIMTSPFTD+ATRKYF
Sbjct: 151 FNIGLPSGKSLFQIQAERILCVQRLAAQVVSEGP-IRPVTIHWYIMTSPFTDEATRKYFS 209
Query: 202 GHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDM 261
HKYFGLE DQ++FFQQGT+PCV+KDG+FIMETP+ +AKAPDGNGGVY+ALK S+LLEDM
Sbjct: 210 SHKYFGLEPDQISFFQQGTLPCVTKDGKFIMETPFSLAKAPDGNGGVYAALKCSRLLEDM 269
Query: 262 ATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEXXXXXXXXXXXX 321
A+RGIKY+DCYGVDN LVRVADPTFLGYFIDKG ++ AKVVRKAYPQE
Sbjct: 270 ASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKGAASAAKVVRKAYPQEQVGVFVRRGKGG 329
Query: 322 PLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEK 381
PLTVVEYSELD S+ASAINQ TGRL++CWSNVCLHMFTLDFLNQVA GLEKDSVYHLAEK
Sbjct: 330 PLTVVEYSELDQSMASAINQRTGRLQYCWSNVCLHMFTLDFLNQVATGLEKDSVYHLAEK 389
Query: 382 KIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLV 441
KIPS++G T+G KLEQFIFD+FPYAPSTALFEVLREEEFAPVKN NGSNFDTP+SARLLV
Sbjct: 390 KIPSMNGYTMGLKLEQFIFDSFPYAPSTALFEVLREEEFAPVKNVNGSNFDTPESARLLV 449
Query: 442 LRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 495
LRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI
Sbjct: 450 LRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 503
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| TAIR|locus:2044787 GlcNAc1pUT2 "N-acetylglucosamine-1-phosphate uridylyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MYL3 MGG_15671 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000037237 ungA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1334459 Uap1 "UDP-N-acetylglucosamine pyrophosphorylase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P7W7 UAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MJP7 UAP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S210 UAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q16222 UAP1 "UDP-N-acetylhexosamine pyrophosphorylase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-1233 uap1 "UDP-N-acteylglucosamine pyrophosphorylase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q54GN5 | UAP1_DICDI | 2, ., 7, ., 7, ., 2, 3 | 0.3932 | 0.9134 | 0.9322 | yes | no |
| Q16222 | UAP1_HUMAN | 2, ., 7, ., 7, ., 2, 3 | 0.4176 | 0.9134 | 0.8697 | yes | no |
| O64765 | UAP1_ARATH | 2, ., 7, ., 7, ., 2, 3 | 0.8051 | 0.9979 | 0.9880 | no | no |
| Q18493 | UAP1_CAEEL | 2, ., 7, ., 7, ., 2, 3 | 0.3360 | 0.8812 | 0.9049 | yes | no |
| Q91YN5 | UAP1_MOUSE | 2, ., 7, ., 7, ., 2, 3 | 0.4241 | 0.9215 | 0.8773 | yes | no |
| Q28CH3 | UAP1L_XENTR | 2, ., 7, ., 7, ., - | 0.4341 | 0.9014 | 0.8767 | yes | no |
| P43123 | UAP1_YEAST | 2, ., 7, ., 7, ., 2, 3 | 0.3978 | 0.8772 | 0.9140 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.7.23 | 0.824 |
| 3rd Layer | 2.7.7 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh2_kg.4__1527__AT2G35020.1 | annotation not avaliable (498 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
 | Al_scaffold_0006_1722 | • | • | • | 0.559 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 497 | |||
| PLN02435 | 493 | PLN02435, PLN02435, probable UDP-N-acetylglucosami | 0.0 | |
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 1e-175 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 1e-109 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 4e-85 | |
| cd04180 | 266 | cd04180, UGPase_euk_like, Eukaryotic UGPase-like i | 3e-62 | |
| pfam01704 | 417 | pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly | 5e-43 | |
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 3e-32 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 1e-24 | |
| cd00897 | 300 | cd00897, UGPase_euk, Eukaryotic UGPase catalyses t | 3e-11 | |
| PLN02474 | 469 | PLN02474, PLN02474, UTP--glucose-1-phosphate uridy | 6e-04 |
| >gnl|CDD|215238 PLN02435, PLN02435, probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
Score = 1007 bits (2606), Expect = 0.0
Identities = 433/497 (87%), Positives = 465/497 (93%), Gaps = 4/497 (0%)
Query: 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIE 60
M+EP V E+ + + PPQALLERLKDYGQEDAFALWDELSP+ERD LV+DIE
Sbjct: 1 MKEPVV---ENEAVTAPGPWGAAPPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIE 57
Query: 61 SLDLPRVDRIIRCSLRSQGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKL 120
SLDLPR+DRIIRCSLRSQGLPV AIEPVPE SVSTVEERT ++RERWWKMGLKAIS+GKL
Sbjct: 58 SLDLPRIDRIIRCSLRSQGLPVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKL 117
Query: 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSA 180
AV+LLSGGQGTRLGSSDPKGC NIGLPSGKSLFQLQAERILCVQRLAAQ +SEG G
Sbjct: 118 AVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAAQASSEGPG-RPV 176
Query: 181 AIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240
IHWYIMTSPFTD+ATRK+FE HKYFGLE+DQVTFFQQGT+PCVSKDG+FIMETP+KVAK
Sbjct: 177 TIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK 236
Query: 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300
APDGNGGVY+ALKSS+LLEDMA+RGIKY+DCYGVDNALVRVADPTFLGYFIDKGV++ AK
Sbjct: 237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAK 296
Query: 301 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTL 360
VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELD ++ASAINQ+TGRLR+CWSNVCLHMFTL
Sbjct: 297 VVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDQAMASAINQQTGRLRYCWSNVCLHMFTL 356
Query: 361 DFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEF 420
DFLNQVANGLEKDS+YHLAEKKIPSIHG T+G KLEQFIFDAFPYAPSTALFEVLREEEF
Sbjct: 357 DFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIFDAFPYAPSTALFEVLREEEF 416
Query: 421 APVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENL 480
APVKNANGSNFDTP+SARLLVLRLHTRWV+AAGGFLTHSVPLYATGVEVSPLCSYAGENL
Sbjct: 417 APVKNANGSNFDTPESARLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENL 476
Query: 481 EAICRGRTFHAPCEIGF 497
EAICRGRTFHAPCEI F
Sbjct: 477 EAICRGRTFHAPCEISF 493
|
Length = 493 |
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >gnl|CDD|132998 cd00897, UGPase_euk, Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >gnl|CDD|178092 PLN02474, PLN02474, UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 99.69 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 99.11 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 99.07 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 99.02 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 99.01 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 99.0 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 99.0 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.95 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 98.94 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.94 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 98.91 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.91 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 98.89 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.88 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 98.87 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 98.87 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 98.86 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 98.84 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.84 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 98.83 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 98.81 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 98.81 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 98.78 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 98.78 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.76 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.76 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 98.74 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 98.73 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 98.73 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 98.72 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 98.68 | |
| PLN02917 | 293 | CMP-KDO synthetase | 98.68 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.67 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 98.66 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 98.64 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 98.62 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.6 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 98.59 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 98.57 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.57 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 98.57 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 98.57 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 98.54 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 98.51 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 98.49 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 98.48 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 98.47 | |
| KOG1460 | 407 | consensus GDP-mannose pyrophosphorylase [Carbohydr | 98.43 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 98.42 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 98.34 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 98.33 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 98.33 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 98.03 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 98.02 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.98 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 97.93 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 97.89 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 97.88 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 97.87 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 97.76 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 97.7 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 97.65 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.61 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.6 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.46 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 97.46 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 97.45 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 97.39 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 97.36 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 97.26 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 97.18 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 97.16 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 97.08 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 97.07 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 97.07 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 96.97 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 96.93 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 96.87 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 96.86 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 96.81 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.8 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 96.76 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 96.69 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 96.6 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 96.55 | |
| COG1210 | 291 | GalU UDP-glucose pyrophosphorylase [Cell envelope | 96.04 | |
| COG4750 | 231 | LicC CTP:phosphocholine cytidylyltransferase invol | 95.6 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 93.84 | |
| COG2068 | 199 | Uncharacterized MobA-related protein [General func | 93.32 | |
| COG1212 | 247 | KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase | 82.27 | |
| PF14134 | 513 | DUF4301: Domain of unknown function (DUF4301) | 81.56 |
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-128 Score=1020.69 Aligned_cols=493 Identities=88% Similarity=1.401 Sum_probs=453.9
Q ss_pred CCCCceeeecccCCCCCCCCCCCCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCC
Q 010950 1 MREPTVVGTESNGGSVGSIAQSPPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQGL 80 (497)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~l~~ql~~iD~~~~~~~~~~~l~~~~~ 80 (497)
|.||.|-. .++..-++|..- +.++|+++|.++||+|||+||++|+++||++|++||+++|++++..++++++..++.
T Consensus 1 ~~~~~~~~--~~~~~~~~~~~~-~~~~l~~~l~~~gQ~HLl~~w~~ls~~e~~~L~~qL~~iD~~~l~~~~~~~~~~~~~ 77 (493)
T PLN02435 1 MKEPVVEN--EAVTAPGPWGAA-PPQALLERLKDYGQEDAFALWDELSPEERDLLVRDIESLDLPRIDRIIRCSLRSQGL 77 (493)
T ss_pred CCcccccc--ccCCCCCCCCcc-cHHHHHHHHHHcChHHHHHhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHhhccCC
Confidence 78886643 345555778764 456899999999999999999999999999999999999999999999888765555
Q ss_pred CCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHH
Q 010950 81 PVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERI 160 (497)
Q Consensus 81 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i 160 (497)
+++.++|+|++.+.++++.+.++.++|++.|+++|++||||||+||||||||||+++|||||+|++|++|||||++++||
T Consensus 78 ~~~~i~P~p~~~~~~~~~~~~~~~~~~~~~Gl~~I~~gkvavvlLAGGqGTRLG~~~PKg~~~Iglps~kslfql~~e~I 157 (493)
T PLN02435 78 PVPAIEPVPENSVSTVEERTPEDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERI 157 (493)
T ss_pred chhccCCCChhhccchhccChHHHHHHHHHHHHHHhcCCEEEEEeCCCcccccCCCCCccceecCCCCCCcHHHHHHHHH
Confidence 77889999988888887776667788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCcccc
Q 010950 161 LCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAK 240 (497)
Q Consensus 161 ~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~ 240 (497)
+++|+++.+..+.. ..+++.||||||||+.||++|++||++|+|||+++++|+||+|+++||++.+|+++|+++++++|
T Consensus 158 ~~lq~la~~~~~~~-~~~~~~IPl~IMTS~~T~~~T~~ff~~~~~FGl~~~~V~fF~Q~~~P~~~~dg~i~l~~~~~i~~ 236 (493)
T PLN02435 158 LCVQRLAAQASSEG-PGRPVTIHWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAK 236 (493)
T ss_pred HHHHHHHHhhcccc-cCCCCceeEEEeCCcchhHHHHHHHHhCCCCCCCccceEEEecCCcceECCCCCcccCCCccccc
Confidence 99999998765311 12578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCC
Q 010950 241 APDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKG 320 (497)
Q Consensus 241 ~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~ 320 (497)
+|+||||+|.+|+++|+|++|.++|++|+||+||||+|++++||.|||||+.++++|++||++|+.|+|+||+||+.+.+
T Consensus 237 ~P~GnGgiy~aL~~sG~Ld~l~~~Gi~yi~v~~vDN~L~~~~DP~flG~~~~~~~d~~~kVv~K~~~~EkvG~i~~~~~~ 316 (493)
T PLN02435 237 APDGNGGVYAALKSSRLLEDMASRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRRGKG 316 (493)
T ss_pred CCCCCcHHHHHHHHCCcHHHHHhcCCEEEEEEecccccccccCHHHHHHHHhcCCceEEEeeecCCCCCceeEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996568
Q ss_pred CCeEEEEeccCChhhhhhccccCCcccccccceeeEEEehHHHHHHhhccccCccceeeecccCccCCCcccchhhhhHh
Q 010950 321 GPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIF 400 (497)
Q Consensus 321 g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~~~~~~klE~fif 400 (497)
|+++||||+|+++++++.+++++|++.|++||||||||+++||+++++..+..+|||+|+|||||+|+.+||+|||+|||
T Consensus 317 g~~~vvEYsEl~~~~~~~~~~~~g~L~~~~gnI~~h~fs~~fL~~~~~~~~~~l~~H~A~Kkip~~~~~~ngiK~E~FiF 396 (493)
T PLN02435 317 GPLTVVEYSELDQAMASAINQQTGRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIHGYTMGLKLEQFIF 396 (493)
T ss_pred CCEEEEEeccCCHHHHhccCccccccccchhhHHHhhccHHHHHHHHHhhhhcCCceeeccccCccCCCcceEEeeeeee
Confidence 99999999999999988777667999999999999999999999998766667999999999999999999999999999
Q ss_pred hcCcCCCceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeccCCCCccCeEEecccCcccccch
Q 010950 401 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENL 480 (497)
Q Consensus 401 D~~~~~~~~~~~~V~R~~eFsPvKn~~g~~~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~~~~~~ieispl~sy~Ge~l 480 (497)
|+|++++++.+++|+|++|||||||++|.+.|||+|||++|+++|+|||+++|+.+.++.+.....|||||++||+||||
T Consensus 397 Dvf~~a~~~~~~eV~R~~EFaPlKN~~g~~~Dsp~tar~~l~~~~~~wl~~aG~~~~~~~~~~~~~vEisP~~sY~gE~L 476 (493)
T PLN02435 397 DAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPESARLLVLRLHTRWVVAAGGFLTHSVPLYATGVEVSPLCSYAGENL 476 (493)
T ss_pred cchhhcCceEEEEEchhhccCcccCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCEecCCccccCCcEEeCCceeeCCCCc
Confidence 99999999999999999999999999999899999999999999999999999987533321234699999999999999
Q ss_pred hhhhCCceecCCccccC
Q 010950 481 EAICRGRTFHAPCEIGF 497 (497)
Q Consensus 481 ~~~~~~~~~~~p~~i~~ 497 (497)
+.+++|++|+.|.+++|
T Consensus 477 ~~~~~~~~~~~~~~~~~ 493 (493)
T PLN02435 477 EAICRGRTFHAPCEISF 493 (493)
T ss_pred hhhcCCCeecCceeecC
Confidence 99999999999999876
|
|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
| >COG2068 Uncharacterized MobA-related protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF14134 DUF4301: Domain of unknown function (DUF4301) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 497 | ||||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 5e-96 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 7e-95 | ||
| 1vm8_A | 534 | Crystal Structure Of Udp-N-Acetylglucosamine Pyroph | 1e-94 | ||
| 2yqc_A | 486 | Crystal Structure Of Uridine-Diphospho-N-Acetylgluc | 2e-86 | ||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 1e-54 | ||
| 3r2w_A | 528 | Crystal Strucutre Of Udp-Glucose Pyrophosphorylase | 1e-04 | ||
| 2i5k_A | 488 | Crystal Structure Of Ugp1p Length = 488 | 1e-04 | ||
| 3gue_A | 484 | Crystal Structure Of Udp-Glucose Phosphorylase From | 5e-04 |
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
|
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
| >pdb|1VM8|A Chain A, Crystal Structure Of Udp-N-Acetylglucosamine Pyrophosphorylase (Agx2) From Mus Musculus At 2.50 A Resolution Length = 534 | Back alignment and structure |
| >pdb|2YQC|A Chain A, Crystal Structure Of Uridine-Diphospho-N-Acetylglucosamine Pyrophosphorylase From Candida Albicans, In The Apo-Like Form Length = 486 | Back alignment and structure |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
| >pdb|3R2W|A Chain A, Crystal Strucutre Of Udp-Glucose Pyrophosphorylase Of Homo Sapiens Length = 528 | Back alignment and structure |
| >pdb|2I5K|A Chain A, Crystal Structure Of Ugp1p Length = 488 | Back alignment and structure |
| >pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
Score = 469 bits (1208), Expect = e-163
Identities = 187/494 (37%), Positives = 280/494 (56%), Gaps = 32/494 (6%)
Query: 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLP-----RVDRIIRCSLRS 77
Q +++ K Q+ F +D L+ D++ + + +++ P V++ I+ S +
Sbjct: 4 KSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTN 63
Query: 78 QGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSD 137
+P ++ + + D + W ++GLKAI +G++AVLL++GGQGTRLGSS
Sbjct: 64 S--TSRNFTQLPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSA 121
Query: 138 PKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197
PKGC NI LPS KSLFQ+QAE+IL +++LA Q I+WYIMTS T +AT
Sbjct: 122 PKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPI---INWYIMTSGPTRNATE 178
Query: 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSK 256
+F + YFGL S QV FF QGT+PC + G + ++E + ++PDGNGG+Y ALK +
Sbjct: 179 SFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNG 238
Query: 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVR 316
+L+D+ ++GIK+I Y VDN LV+VADP F+G+ I K KVVRK E VG+ V
Sbjct: 239 ILDDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVL 298
Query: 317 RGKGGPLTVVEYSELDPSLASAIN-QETGRLRFCWSNVCLHMFTLDFLNQVAN---GLEK 372
V+EYSE+ LA+ + Q++ +L +N+ H ++++FLN++ +K
Sbjct: 299 DQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQK 358
Query: 373 DSVYHLAEKKIPSIHGQT---------VGFKLEQFIFDAFPYAPST--ALFEVLREEEFA 421
+H+A+KKIPS++ + G KLEQFIFD FP EV R +EF+
Sbjct: 359 YLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFPSVELNKFGCLEVDRLDEFS 418
Query: 422 PVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLE 481
P+KNA+G+ DTP + R L ++WVI GG + + VEV SY GE LE
Sbjct: 419 PLKNADGAKNDTPTTCRNHYLERSSKWVIQNGGVIDNQG-----LVEVDSKTSYGGEGLE 473
Query: 482 AICRGRTFHAPCEI 495
+ G+ F I
Sbjct: 474 FV-NGKHFKNGDII 486
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 99.55 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 99.05 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 98.99 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 98.83 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 98.8 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 98.77 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 98.76 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 98.74 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 98.72 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 98.71 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 98.71 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 98.7 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 98.67 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 98.62 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 98.6 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 98.56 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 98.55 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 98.47 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 98.46 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 98.45 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 98.42 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 98.41 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 98.4 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 98.4 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 98.39 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 98.33 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 98.23 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 98.19 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 98.15 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 98.13 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 98.11 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 98.09 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 98.08 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 98.06 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 97.97 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 97.97 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 97.94 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 97.88 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 97.85 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 97.83 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 97.76 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 97.56 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 97.54 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 97.38 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 97.29 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 97.2 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 97.15 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 96.84 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 96.83 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 95.98 |
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-109 Score=889.17 Aligned_cols=463 Identities=39% Similarity=0.681 Sum_probs=425.2
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCC-CC-CCcccCCCCCccccccC
Q 010950 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESL-DLPRVDRIIRCSLRSQGL-PV-AAIEPVPERSVSTVEER 99 (497)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~l~~ql~~i-D~~~~~~~~~~~l~~~~~-~~-~~~~p~p~~~~~~~~~~ 99 (497)
.+.++|+++|+++||+|||+||++|+++||++|++||+++ |++.+..+++++...+.. .. ..++|+|++.+.++.+.
T Consensus 4 ~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~~d~~~l~~~~~~~~~~~~~~~~~~~i~p~p~~~~~~~~~~ 83 (486)
T 2yqc_A 4 KSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTNSTSRNFTQLPNEQTASTLDL 83 (486)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTC----CCCEECCCGGGEEETTTS
T ss_pred hhHHHHHHHHHHcCcHHHhhhhccCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccccccccccccCCChhhccccccC
Confidence 4568999999999999999999999999999999999999 999999999888765432 22 24899999888888887
Q ss_pred ChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 010950 100 TMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGS 179 (497)
Q Consensus 100 ~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~ 179 (497)
+.+++++|++.|+++|++||+|+|+||||+|||||+++||||+||++|+||||||+++++|+++++++.+.++. ...
T Consensus 84 ~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~---~~~ 160 (486)
T 2yqc_A 84 SKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKS---TKK 160 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTC---SSC
T ss_pred ChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCC---CcC
Confidence 77888999999999999999999999999999999999999999999999999999999999999998766541 145
Q ss_pred cceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCC-ceeecCCCccccccCCCchhhHhhhhccHH
Q 010950 180 AAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKLL 258 (497)
Q Consensus 180 ~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g-~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l 258 (497)
+.||||||||++||+.|++||++|+|||++.++|+||+|+++||++.+| ++++++++.++|+|+||||+|.+|+++|+|
T Consensus 161 ~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~L 240 (486)
T 2yqc_A 161 PIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGIL 240 (486)
T ss_dssp CCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHH
T ss_pred CccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcH
Confidence 7899999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhh
Q 010950 259 EDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASA 338 (497)
Q Consensus 259 ~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~ 338 (497)
++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.|+|++|++|++..+|+++|+||+|+++++++.
T Consensus 241 d~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~ 320 (486)
T 2yqc_A 241 DDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANK 320 (486)
T ss_dssp HHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHC
T ss_pred HHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999986336899999999999998876
Q ss_pred ccccC--CcccccccceeeEEEehHHHHHHhhccccC---ccceeeecccCccCC---------CcccchhhhhHhhcCc
Q 010950 339 INQET--GRLRFCWSNVCLHMFTLDFLNQVANGLEKD---SVYHLAEKKIPSIHG---------QTVGFKLEQFIFDAFP 404 (497)
Q Consensus 339 ~~~~~--g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~---lp~h~a~Kki~~~~~---------~~~~~klE~fifD~~~ 404 (497)
+++ + |.+.|+++|||||||+++||++++...... ||||+++|||||+|. .+||+|||+||||+|+
T Consensus 321 ~~~-~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn~~klE~~~~d~~~ 399 (486)
T 2yqc_A 321 KDP-QDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFP 399 (486)
T ss_dssp EET-TEEEEESSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCCEEEEECCGGGGGG
T ss_pred ccc-cccccccccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCCeeeeeehHhhHHh
Confidence 642 3 678899999999999999999966555556 999999999999873 3689999999999999
Q ss_pred CCC--ceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeccCCCCccCeEEecccCcccccchhh
Q 010950 405 YAP--STALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEA 482 (497)
Q Consensus 405 ~~~--~~~~~~V~R~~eFsPvKn~~g~~~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~~~~~~ieispl~sy~Ge~l~~ 482 (497)
+++ ++.+++|+|++|||||||++|...|||+|||++|+++|+|||++||+.+..+ .+|||||++||+||||+
T Consensus 400 ~~~l~~~~~~~V~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~aG~~~~~~-----~~~eisp~~sy~ge~l~- 473 (486)
T 2yqc_A 400 SVELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRNHYLERSSKWVIQNGGVIDNQ-----GLVEVDSKTSYGGEGLE- 473 (486)
T ss_dssp GSCGGGEEEEEECHHHHCCBCCSCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEECTT-----CCCBCCTTTCSSSTTCG-
T ss_pred hcccCceEEEEECcccceeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecCC-----CcEEEcceeeECCCCch-
Confidence 999 9999999999999999999998899999999999999999999999988532 35999999999999999
Q ss_pred hhCCceecCCccc
Q 010950 483 ICRGRTFHAPCEI 495 (497)
Q Consensus 483 ~~~~~~~~~p~~i 495 (497)
+++||+|+.|.+|
T Consensus 474 ~~~~~~~~~~~~~ 486 (486)
T 2yqc_A 474 FVNGKHFKNGDII 486 (486)
T ss_dssp GGTTCEECTTCBC
T ss_pred hhcCccccCCccC
Confidence 6699999999875
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 497 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 1e-177 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 7e-98 | |
| d1w55a1 | 205 | c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, | 4e-05 | |
| d1w77a1 | 226 | c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl- | 2e-04 | |
| d2oi6a2 | 248 | c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate | 0.002 | |
| d1i52a_ | 225 | c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-eryt | 0.002 | |
| d2cu2a2 | 268 | c.68.1.20 (A:1-268) Putative mannose-1-phosphate g | 0.002 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 505 bits (1301), Expect = e-177
Identities = 205/498 (41%), Positives = 280/498 (56%), Gaps = 37/498 (7%)
Query: 26 QALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QG 79
L L GQE W+EL ++ L ++++++ ++ + ++ Q
Sbjct: 4 NDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQK 63
Query: 80 LPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPK 139
A +EPVP + + R D+ + W GL IS K+AVLLL+GGQGTRLG + PK
Sbjct: 64 NVDARMEPVPREVLGSAT-RDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPK 122
Query: 140 GCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKY 199
G ++GLPS K+LFQ+QAERIL +Q++A + I WYIMTS T ++T+++
Sbjct: 123 GMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKC-----IIPWYIMTSGRTMESTKEF 177
Query: 200 FEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLE 259
F HKYFGL+ + V FFQQG +P +S DG+ I+E KV+ APDGNGG+Y AL + ++E
Sbjct: 178 FTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVE 237
Query: 260 DMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK 319
DM RGI I Y VDN LV+VADP F+G+ I KG GAKVV K P E VGV R
Sbjct: 238 DMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--V 295
Query: 320 GGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLA 379
G VVEYSE+ + A GRL F N+ H FT+ FL V N E +H+A
Sbjct: 296 DGVYQVVEYSEISLATAQK-RSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVA 354
Query: 380 EKKIPSIH--GQTV------GFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNF 431
+KKIP + GQ + G K+E+F+FD F +A ++EVLRE+EF+P+KNA+ N
Sbjct: 355 QKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNG 414
Query: 432 -DTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATG-------------VEVSPLCSYAG 477
D P +AR ++ LH WV+ AGG E+SPL SYAG
Sbjct: 415 KDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRLKDANDVPIQCEISPLISYAG 474
Query: 478 ENLEAICRGRTFHAPCEI 495
E LE+ + FHAP I
Sbjct: 475 EGLESYVADKEFHAPLII 492
|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Length = 205 | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 226 | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 248 | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Length = 225 | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Length = 268 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 497 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 99.19 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 99.19 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 99.05 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 99.04 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 99.02 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 98.86 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 98.85 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 98.45 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 98.39 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 98.36 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 98.24 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 98.22 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.83 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 97.81 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 97.75 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 96.88 | |
| d1qwja_ | 228 | CMP acylneuraminate synthetase {Mouse (Mus musculu | 94.64 | |
| d1eyra_ | 225 | CMP acylneuraminate synthetase {Neisseria meningit | 94.59 | |
| d1vh1a_ | 246 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 93.33 | |
| d1vica_ | 255 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 87.73 | |
| d1h7ea_ | 245 | CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)syn | 83.71 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=6e-118 Score=950.78 Aligned_cols=465 Identities=43% Similarity=0.715 Sum_probs=426.7
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhc------CCCCCCCcccCCCCCcccc
Q 010950 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS------QGLPVAAIEPVPERSVSTV 96 (497)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~l~~ql~~iD~~~~~~~~~~~l~~------~~~~~~~~~p~p~~~~~~~ 96 (497)
|+.++|+++|+++||+|||++|++|+++||++|++||.+||++.+..+|++++.. ...++..++|+|+..+...
T Consensus 1 m~~~~l~~~L~~~gQ~HLl~~~~~l~~~ek~~L~~qL~~id~~~l~~~~~~a~~~~~~~~~~~~~~~~~~p~p~~~~~~~ 80 (501)
T d1jv1a_ 1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSA 80 (501)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC-----------CCBCCCGGGEEET
T ss_pred CCHHHHHHHHHHhCcHHHHhhhhhCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhhcccccCccccccCCChhhhccc
Confidence 5788999999999999999999999999999999999999999999999887653 1245678999987654444
Q ss_pred ccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCC
Q 010950 97 EERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGG 176 (497)
Q Consensus 97 ~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~ 176 (497)
.. ..++..+|++.|+++|++||||||+||||||||||+++|||++||++++++||||++++||+++++++.++.+
T Consensus 81 ~~-~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~~~~v~~~~~ksllql~~e~i~~l~~~a~~~~~---- 155 (501)
T d1jv1a_ 81 TR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG---- 155 (501)
T ss_dssp TT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS----
T ss_pred cc-ChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCceeeeeccCCCCcHHHHHHHHHHHHHHHHHHhcC----
Confidence 33 3456788999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred CCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhcc
Q 010950 177 SGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK 256 (497)
Q Consensus 177 ~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg 256 (497)
+++.||||||||+.||++|++||++|+|||+++++|+||+|+++||++.+|+++++++++++|+|+||||+|.+|.++|
T Consensus 156 -~~~~iPl~IMtS~~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG 234 (501)
T d1jv1a_ 156 -NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQN 234 (501)
T ss_dssp -SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTT
T ss_pred -CCCCceEEEECChhHhHHHHHHHHhccccCCCcCceEEEEecCcceECCCCCcccCCCCcccccCCCchHHHHHHHHCC
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhh
Q 010950 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA 336 (497)
Q Consensus 257 ~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~ 336 (497)
+|++|.++|++|++|+||||+|++++||.|||||+.+++++++||++|+.|+|+||++|+. +|+++|+||+|+|++++
T Consensus 235 ~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~lG~~~~~~~~~~~kvv~k~~~~e~~G~l~~~--dg~~~vvEysel~~~~~ 312 (501)
T d1jv1a_ 235 IVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATA 312 (501)
T ss_dssp HHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHH
T ss_pred cHHHHHHCCCEEEEEEecCCccccccCHHHHHHHHhcccceeEEEEEcCCCCcccceEEEE--CCeEEEEEeccCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 79999999999999998
Q ss_pred hhccccCCcccccccceeeEEEehHHHHHHhhccccCccceeeecccCccCC--------CcccchhhhhHhhcCcCCCc
Q 010950 337 SAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPS 408 (497)
Q Consensus 337 ~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~--------~~~~~klE~fifD~~~~~~~ 408 (497)
+.++ ++|++.|++||||||||+++||+++++.....||||+|+|||||+|. .+||+|||+||||+|+++++
T Consensus 313 ~~~~-~~g~l~f~~~Ni~~~~fsl~fl~~~~~~~~~~l~~hva~Kki~~~d~~~~~~~p~~~n~iklE~fifD~~~~~~~ 391 (501)
T d1jv1a_ 313 QKRS-SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKK 391 (501)
T ss_dssp HCBC-TTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSS
T ss_pred hhcc-CCCcccccccceeheeeEHHHHHHHHHhcccCCCceEeccccCccCCCCCcccCCCCcchhHHHHHHHHHHhccc
Confidence 8766 58999999999999999999999999876678999999999999873 47899999999999999999
Q ss_pred eeEEEEecCccccccccCCCC-CCCCHHHHHHHHHHHHHHHHHHcCceeccCCC-------------CccCeEEecccCc
Q 010950 409 TALFEVLREEEFAPVKNANGS-NFDTPDSARLLVLRLHTRWVIAAGGFLTHSVP-------------LYATGVEVSPLCS 474 (497)
Q Consensus 409 ~~~~~V~R~~eFsPvKn~~g~-~~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~-------------~~~~~ieispl~s 474 (497)
+.+++|+|++|||||||++|. +.|||+||+.+|+++|+|||+++|+.+..+.. .....|||||++|
T Consensus 392 ~~~~~V~R~~eFaPvKN~~~~~~~dsp~ta~~~l~~~~~~wl~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~EIsp~~s 471 (501)
T d1jv1a_ 392 FVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRLKDANDVPIQCEISPLIS 471 (501)
T ss_dssp EEEEEECHHHHCCBCCSCTTSSSSSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCSSCCCCSTTCCCCCEEECTTTC
T ss_pred eEEEEEchhhccccccCCCCCCCCCCHHHHHHHHHHHhHHHHHHcCCeEecccccccccccccccccCCCceEEECCccc
Confidence 999999999999999999885 58999999999999999999999998753210 0123599999999
Q ss_pred ccccchhhhhCCceecCCcccc
Q 010950 475 YAGENLEAICRGRTFHAPCEIG 496 (497)
Q Consensus 475 y~Ge~l~~~~~~~~~~~p~~i~ 496 (497)
|+||||+.+++|++|+.|++|.
T Consensus 472 y~GEgL~~~~~~~~~~~p~~l~ 493 (501)
T d1jv1a_ 472 YAGEGLESYVADKEFHAPLIID 493 (501)
T ss_dssp SSSCSCHHHHTTCEECSSEEEE
T ss_pred ccccCHHHhhCCCEecCceEEc
Confidence 9999999999999999999863
|
| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
| >d1vh1a_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KdsB [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]} | Back information, alignment and structure |
|---|