Citrus Sinensis ID: 011017

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-----

MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSFS

cccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccEEEHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccHHcccccccEEEcccHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHcccccccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccccEEEEEEccccEEccHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHccccccEEEEccccHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHccccEEEcc

cccccccccccccccccccEEEEHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHccccccccHHHHHHHHHHHHHHHHHcccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEccHHHHHHccccHEEEEcccHcHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHccccHHcccccccccEEEEEEcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHccccEEEEEEcccccEccccHHHHHHHHHHHHHHHHHHHcccEEEEEHHHccHHHHccccEEEEEccccccEEEEEcccHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccEEEEc

maskpgiltewpwkplgsykhvvlapwamhsiycfigsrkserdyaYFLIFPFLLLRMLHDQIWISLSRYRTAKrnnrivdkaiefdqvdrernwddqiVFNGLIFYIVRMlippsysnlrfwrsdGVILTILVHMGPVEFLYYWFHRALHHHYLysryhshhhssvvtepitsviHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFmnnmghcnfefipmwlftvfpplkflmytpsyhslhhtqfrtnyslfmpiydyiygtidrssdsVYEKSLkrsgeeeeesaddvdvvhlthlttpesiYHLRIGFaslaskphrytYTLSQWYLQLLWPFTASCSVLVSWIYGrtfvsesntldklklqtwVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLlnqgeelnrngeiylerqpnklkikvVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCqmgikvsfs

maskpgiltewpwkplGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSryrtakrnnrivdkaiefdqvdrernwdDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRsgeeeeesaddvdvVHLTHLttpesiyhLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVsesntldklklqtwvVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASslcqmgikvsfs

MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFhralhhhylysryhshhhssVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGeeeeeSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGtvtankvanavaSSLCQMGIKVSFS

******ILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTID************************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK****

***KPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSD******************DDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS**

MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSS*********************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSFS

*****GILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSFS

ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		495	2.2.26 [Sep-21-2011]
F4HVY0		625	Protein ECERIFERUM 1 OS=A	yes	no	0.961	0.761	0.659	0.0
F4HVX7		627	Protein CER1-like 1 OS=Ar	no	no	0.965	0.762	0.593	1e-158
F4IR05		613	Protein CER1-like 2 OS=Ar	no	no	0.953	0.769	0.589	1e-154
Q8H1Z0		632	Protein ECERIFERUM 3 OS=A	no	no	0.957	0.75	0.344	2e-79
Q8J207		356	C-5 sterol desaturase OS=	N/A	no	0.284	0.396	0.266	4e-08
Q6ZNB7		445	Alkylglycerol monooxygena	yes	no	0.250	0.278	0.300	3e-06
Q7SBB6		344	Probable C-5 sterol desat	N/A	no	0.294	0.424	0.252	2e-05
Q8BS35		447	Alkylglycerol monooxygena	yes	no	0.250	0.277	0.274	6e-05
Q96IV6		333	Uncharacterized protein C	no	no	0.375	0.558	0.213	6e-05
Q5M8F9		446	Alkylglycerol monooxygena	yes	no	0.252	0.280	0.263	7e-05

>sp\|F4HVY0\|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1	Back alignment and function desciption

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/493 (65%), Positives = 403/493 (81%), Gaps = 17/493 (3%)

Query: 1   MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLH 60
           MA+KPG+LT+WPW PLGS+K++V+APWA+HS Y F+     +RD  YFL+FPFLL R+LH
Sbjct: 1   MATKPGVLTDWPWTPLGSFKYIVIAPWAVHSTYRFVTDDPEKRDLGYFLVFPFLLFRILH 60

Query: 61  DQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNL 120
           +Q+WISLSRY T+    RIVDK I+F+QVDRE NWDDQI+FNG++FYI   L+P +   L
Sbjct: 61  NQVWISLSRYYTSSGKRRIVDKGIDFNQVDRETNWDDQILFNGVLFYIGINLLPEA-KQL 119

Query: 121 RFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFA 180
            +WR+DGV++  L+H GPVEFLYYW H+ALHHH+LYSRYHSHHHSS+VTEPITSVIHPFA
Sbjct: 120 PWWRTDGVLMAALIHTGPVEFLYYWLHKALHHHFLYSRYHSHHHSSIVTEPITSVIHPFA 179

Query: 181 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240
           EHI YF+LFAIPL+TT++ K ASI SF GYIIY+DFMNNMGHCNFE IP  LF +FPPLK
Sbjct: 180 EHIAYFILFAIPLLTTLLTKTASIISFAGYIIYIDFMNNMGHCNFELIPKRLFHLFPPLK 239

Query: 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV 300
           FL YTPSYHSLHHTQFRTNYSLFMP+YDYIYGT+D S+D++YEK+L+R         D V
Sbjct: 240 FLCYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDESTDTLYEKTLERGD-------DIV 292

Query: 301 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 360
           DVVHLTHLTTPESIYHLRIG AS AS P  Y     +W+++LLWPFT S S++ +  Y R
Sbjct: 293 DVVHLTHLTTPESIYHLRIGLASFASYPFAY-----RWFMRLLWPFT-SLSMIFTLFYAR 346

Query: 361 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 420
            FV+E N+ +KL LQ+WV+PRY +QY L WR+EAIN++IE+AILEAD KGVKV+SLGL+N
Sbjct: 347 LFVAERNSFNKLNLQSWVIPRYNLQYLLKWRKEAINNMIEKAILEADKKGVKVLSLGLMN 406

Query: 421 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480
           QGEELNRNGE+Y+   P+ +K+++VDGS LAAAVV+NS+PK T  V++ G +T  KVA  
Sbjct: 407 QGEELNRNGEVYIHNHPD-MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT--KVAYT 463

Query: 481 VASSLCQMGIKVS 493
           +AS+LCQ G++VS
Sbjct: 464 IASALCQRGVQVS 476

Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex. Involved in epicuticular wax biosynthesis and pollen fertility.
Arabidopsis thaliana (taxid: 3702)

>sp\|F4HVX7\|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1	Back alignment and function description

>sp\|F4IR05\|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1	Back alignment and function description

>sp\|Q8H1Z0\|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1	Back alignment and function description

>sp\|Q8J207\|ERG3_LEPMC C-5 sterol desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1	Back alignment and function description

>sp\|Q6ZNB7\|ALKMO_HUMAN Alkylglycerol monooxygenase OS=Homo sapiens GN=AGMO PE=1 SV=1	Back alignment and function description

>sp\|Q7SBB6\|ERG3_NEUCR Probable C-5 sterol desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1	Back alignment and function description

>sp\|Q8BS35\|ALKMO_MOUSE Alkylglycerol monooxygenase OS=Mus musculus GN=Agmo PE=2 SV=1	Back alignment and function description

>sp\|Q96IV6\|CE004_HUMAN Uncharacterized protein C5orf4 OS=Homo sapiens GN=C5orf4 PE=2 SV=1	Back alignment and function description

>sp\|Q5M8F9\|ALKMO_XENTR Alkylglycerol monooxygenase OS=Xenopus tropicalis GN=agmo PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		495
359489254		619	PREDICTED: protein WAX2-like [Vitis vini	0.961	0.768	0.695	0.0
297734710		631	unnamed protein product [Vitis vinifera]	0.961	0.754	0.689	0.0
359489252		619	PREDICTED: protein WAX2-like [Vitis vini	0.961	0.768	0.689	0.0
297734709		2763	unnamed protein product [Vitis vinifera]	0.961	0.172	0.681	0.0
359489250		619	PREDICTED: protein WAX2-like [Vitis vini	0.961	0.768	0.681	0.0
359489248		619	PREDICTED: protein WAX2-like [Vitis vini	0.961	0.768	0.681	0.0
225454042		620	PREDICTED: protein WAX2 [Vitis vinifera]	0.965	0.770	0.664	0.0
1209703		625	maize gl1 homolog [Arabidopsis thaliana]	0.961	0.761	0.657	0.0
225454040		620	PREDICTED: protein WAX2 [Vitis vinifera]	0.965	0.770	0.664	0.0
1199467		567	possible aldehyde decarbonylase [Arabido	0.961	0.839	0.659	0.0

>gi\|359489254\|ref\|XP_002265189.2\| PREDICTED: protein WAX2-like [Vitis vinifera] gi\|297734711\|emb\|CBI16762.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/493 (69%), Positives = 410/493 (83%), Gaps = 17/493 (3%)

Query: 1   MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLH 60
           MASKPGILT+WPW PLG++K+VVLAPWA+H+IY F+   + ERD ++FLIFPFLL RMLH
Sbjct: 1   MASKPGILTDWPWTPLGNFKYVVLAPWAIHAIYSFVVKDEKERDISHFLIFPFLLWRMLH 60

Query: 61  DQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNL 120
           +Q+WISLSR+RTAK NNRIVDK IEF+QVDRERNWDDQI+FNG+IFYI    +P   +++
Sbjct: 61  NQLWISLSRHRTAKGNNRIVDKGIEFEQVDRERNWDDQIIFNGIIFYITYFTVPGG-THM 119

Query: 121 RFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFA 180
            FWR+DGV++TIL+HMGPVEFLYYWFHRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFA
Sbjct: 120 PFWRADGVVITILLHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFA 179

Query: 181 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240
           EHI YFLLF+IPL+T +     SI SFVGYI Y+DFMNNMGHCNFE +P WLF++FP LK
Sbjct: 180 EHIGYFLLFSIPLLTVIFTGTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFSIFPFLK 239

Query: 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV 300
           +LMYTPS+HSLHHTQFRTNYSLFMP YDYIYGT+D+SSD +YEKSL R     EES    
Sbjct: 240 YLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTVDKSSDVLYEKSLTRP----EESP--- 292

Query: 301 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 360
           DVVHLTHLTTP+SIYH+R+GFAS+ASKP+     +S+WYL+L+WP T+   +L+ WI  R
Sbjct: 293 DVVHLTHLTTPDSIYHMRLGFASVASKPY-----ISKWYLRLMWPLTSWYMMLI-WICSR 346

Query: 361 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 420
           TFV E N  +KLKLQTWV+P+Y +QY L  + E INSLIEEAIL+AD +GVKV+SLG+LN
Sbjct: 347 TFVLERNHFNKLKLQTWVIPKYRIQYFLKGQNEPINSLIEEAILDADQRGVKVLSLGILN 406

Query: 421 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480
           QGEELN  GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA  
Sbjct: 407 QGEELNIYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYF 463

Query: 481 VASSLCQMGIKVS 493
            A +LCQ GI+V+
Sbjct: 464 TALALCQKGIQVA 476

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297734710\|emb\|CBI16761.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489252\|ref\|XP_002263787.2\| PREDICTED: protein WAX2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297734709\|emb\|CBI16760.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489250\|ref\|XP_003633900.1\| PREDICTED: protein WAX2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489248\|ref\|XP_002265685.2\| PREDICTED: protein WAX2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225454042\|ref\|XP_002262785.1\| PREDICTED: protein WAX2 [Vitis vinifera] gi\|297744850\|emb\|CBI38118.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|1209703\|gb\|AAB87721.1\| maize gl1 homolog [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|225454040\|ref\|XP_002262647.1\| PREDICTED: protein WAX2 [Vitis vinifera] gi\|297744851\|emb\|CBI38119.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|1199467\|dbj\|BAA11024.1\| possible aldehyde decarbonylase [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		495
UNIPROTKB\|Q7XDI3		621	Os10g0471100 "CER1 protein, pu	0.969	0.772	0.529	2.3e-142
UNIPROTKB\|Q109K1		595	LOC_Os10g33250 "CER1 protein,	0.620	0.515	0.551	8.2e-138
TAIR\|locus:2204813		627	AT1G02190 "AT1G02190" [Arabido	0.965	0.762	0.532	2.2e-137
TAIR\|locus:2040666		613	AT2G37700 "AT2G37700" [Arabido	0.953	0.769	0.530	1e-132
TAIR\|locus:2174368		632	CER3 "ECERIFERUM 3" [Arabidops	0.953	0.746	0.319	6.7e-65
UNIPROTKB\|Q6ETL8		628	P0544B02.10 "Os02g0178800 prot	0.951	0.75	0.298	4.3e-54

UNIPROTKB\|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

 Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
 Identities = 262/495 (52%), Positives = 339/495 (68%)

Query:     1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLH 60
             MA+ PG+ TEWPWK LGS+K+V+LAPW  H  Y        E D  Y  I P LLLRMLH
Sbjct:     1 MATNPGLFTEWPWKKLGSFKYVLLAPWVAHGWYEVATKGWREVDLGYIAILPSLLLRMLH 60

Query:    61 DQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNL 120
             +Q WI++SR + A+   +IV + IEFDQVDRERNWDDQI+ +G++ Y+  + +P    +L
Sbjct:    61 NQAWITISRLQNARGRRQIVRRGIEFDQVDRERNWDDQIILSGILLYLGALYVPGG-QHL 119

Query:   121 RFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITSVIHPFA 180
               WR+DG  L  L+H GPVEFLYYWF                    +VTEPITSVIHPFA
Sbjct:   120 PLWRTDGAGLIALLHAGPVEFLYYWFHRALHHHFLYTHYHSHHHSSIVTEPITSVIHPFA 179

Query:   181 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240
             E + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE +P WLFT FPPLK
Sbjct:   180 ELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFTWFPPLK 239

Query:   241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDV 300
             +LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SLK +        + V
Sbjct:   240 YLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNN-----EEEEAV 294

Query:   301 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 360
             DVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP +   S++++W YG 
Sbjct:   295 DVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPLSW-LSMVLTWTYGS 348

Query:   361 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 420
             +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EAD  G KV+SLGLLN
Sbjct:   349 SFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEADKNGAKVVSLGLLN 408

Query:   421 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXX 480
             Q   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V+L G          
Sbjct:   409 QAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQVILAGNVSKVARAVA 467

Query:   481 XXSSLCQMGIKVSFS 495
                +LC+  IKV+ +
Sbjct:   468 --QALCKKNIKVTMT 480

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

UNIPROTKB\|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

TAIR\|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
F4HVY0	CER1_ARATH	No assigned EC number	0.6592	0.9616	0.7616	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010554001	SubName- Full=Chromosome undetermined scaffold_268, whole genome shotgun sequence; (618 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		495
PLN02869		620	PLN02869, PLN02869, fatty aldehyde decarbonylase	0.0
pfam04116		114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	3e-17
COG3000		271	COG3000, ERG3, Sterol desaturase [Lipid metabolism	5e-16
pfam12076		164	pfam12076, Wax2_C, WAX2 C-terminal domain	0.004

>gnl\|CDD\|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase	Back alignment and domain information

 Score =  821 bits (2121), Expect = 0.0
 Identities = 359/493 (72%), Positives = 422/493 (85%), Gaps = 17/493 (3%)

Query: 1   MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLH 60
           MASKPGILT+WPWKPLGS+K+VVLAPW +HSIY F+   + ERD +YFLIFPFLL RMLH
Sbjct: 1   MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLH 60

Query: 61  DQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNL 120
           +Q+WISLSRYRTAK NNRIVDK IEF+QVDRERNWDDQI+FNG++FY+  M++P + S++
Sbjct: 61  NQLWISLSRYRTAKGNNRIVDKGIEFEQVDRERNWDDQILFNGILFYVGYMILPGA-SHM 119

Query: 121 RFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFA 180
             WR+DGV++TIL+HMGPVEFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFA
Sbjct: 120 PLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFA 179

Query: 181 EHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240
           EHI YFLLFAIPL+TT+    ASIA+F GYI Y+DFMNNMGHCNFE IP WLF++FPPLK
Sbjct: 180 EHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK 239

Query: 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDV 300
           +LMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGT+D+SSD++YEKSLKR     EE     
Sbjct: 240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKR----PEEI---P 292

Query: 301 DVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGR 360
           DVVHLTHLTTP+SIYHLR+GFASLASKP+       +WYL+L+WP T S S++++WIYGR
Sbjct: 293 DVVHLTHLTTPDSIYHLRLGFASLASKPYIS-----KWYLRLMWPVT-SWSMMLTWIYGR 346

Query: 361 TFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLN 420
           TFV E N  +KL LQTWV+P+Y +QY L W+ E+INSLIEEAILEAD +GVKV+SLGLLN
Sbjct: 347 TFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLN 406

Query: 421 QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480
           QGEELNR GE+Y+ R P KLKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA  
Sbjct: 407 QGEELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYF 463

Query: 481 VASSLCQMGIKVS 493
           +AS+LCQ GI+V+
Sbjct: 464 IASALCQRGIQVA 476

Length = 620

>gnl\|CDD\|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	Back alignment and domain information

>gnl\|CDD\|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|192933 pfam12076, Wax2_C, WAX2 C-terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		495
PLN02869		620	fatty aldehyde decarbonylase	100.0
KOG0873		283	consensus C-4 sterol methyl oxidase [Lipid transpo	100.0
COG3000		271	ERG3 Sterol desaturase [Lipid metabolism]	99.95
KOG0872		312	consensus Sterol C5 desaturase [Lipid transport an	99.89
KOG0874		287	consensus Sphingolipid hydroxylase [Lipid transpor	99.82
PF04116		114	FA_hydroxylase: Fatty acid hydroxylase superfamily	99.72
PLN02434		237	fatty acid hydroxylase	98.99
PRK14982		340	acyl-ACP reductase; Provisional	98.17
KOG0539		240	consensus Sphingolipid fatty acid hydroxylase [Lip	97.74
PLN02601		303	beta-carotene hydroxylase	97.42
PRK07424		406	bifunctional sterol desaturase/short chain dehydro	97.0
PF10520		178	Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme	94.03
PLN03209		576	translocon at the inner envelope of chloroplast su	91.05
COG5322		351	Predicted dehydrogenase [General function predicti	88.7
KOG1208		314	consensus Dehydrogenases with different specificit	86.45
KOG1014		312	consensus 17 beta-hydroxysteroid dehydrogenase typ	84.25
PRK07985		294	oxidoreductase; Provisional	83.71
PLN02780		320	ketoreductase/ oxidoreductase	82.59
COG1484		254	DnaC DNA replication protein [DNA replication, rec	82.54
PRK05866		293	short chain dehydrogenase; Provisional	82.2
PRK06128		300	oxidoreductase; Provisional	81.93

>PLN02869 fatty aldehyde decarbonylase	Back alignment and domain information

Probab=100.00  E-value=9.6e-160  Score=1274.12  Aligned_cols=476  Identities=75%  Similarity=1.309  Sum_probs=458.2

Q ss_pred             CCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccccCCccchhhHHHHHHHHHHHhHHHHhhcchhhHhcCcCC
Q 011017            1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIV   80 (495)
Q Consensus         1 ~~~~~~~l~~wpw~~lg~~ky~~~~p~~~~~~~~~~~~~~~~~~~~~~~il~~~llR~l~~~~wi~~~~~~~~~~k~KIq   80 (495)
                      ||++||+||+|||++||||||++|||+|++++|++.++++++.|+.|+++++++++|++++|+|++++|++++++|+||+
T Consensus         1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~   80 (620)
T PLN02869          1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV   80 (620)
T ss_pred             CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence            99999999999999999999999999999999999999877788889999999999999999999999999999999999


Q ss_pred             CCCCCcchhhhhhcchhhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccc
Q 011017           81 DKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYH  160 (495)
Q Consensus        81 ~~~~~~~qvdrE~~~~n~iil~~ll~~~~~~~~p~~~~~lP~W~~~g~i~~lll~llv~Df~fYw~HRllH~~~Ly~riH  160 (495)
                      +|+++|||+|||++||||||+|.++++++++.+| ..+++|.|+..|++..+++|+++.|++|||+||++|++++||++|
T Consensus        81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~H  159 (620)
T PLN02869         81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYH  159 (620)
T ss_pred             ccCCCceeeccccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            9999999999999999999999999999999999 789999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCcchhhcchhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhcccCceecccccccccCCcc
Q 011017          161 SHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK  240 (495)
Q Consensus       161 k~HHss~~p~p~ta~~~hplE~ll~~~l~~iPll~~~llg~~si~~~~~y~i~~~~~~~~~HsG~e~~P~~l~~~lp~L~  240 (495)
                      ++||++.+|+|+|+..+++.|++.+.+.+.+|+++..+.+..|+.++++|+++.++.++++|||+|++|+++++.+|+++
T Consensus       160 kvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLk  239 (620)
T PLN02869        160 SHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK  239 (620)
T ss_pred             hhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcch
Confidence            99999999999999854446888877778889987767777789999999999999999999999999999888889999


Q ss_pred             cccCChhhhHHHhhcCCCCcccccchhhhhcCCCCCCChhHHHHhhcCCCccccccCCCCCeEEecccCCccccccccch
Q 011017          241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIG  320 (495)
Q Consensus       241 ~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~~~~~g~~~~~~~~~~~pd~V~L~h~~~~~s~~h~~~~  320 (495)
                      |+++||++|++||+++++|||.+|++|||+|||+++++++.+|+...+.+       ++||||||||+||++|+||+|||
T Consensus       240 yll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~~~~-------~~pd~V~l~H~t~~~s~~h~~~~  312 (620)
T PLN02869        240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPE-------EIPDVVHLTHLTTPDSIYHLRLG  312 (620)
T ss_pred             heecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhcCcc-------cCCCEEEEeccCCHHHhhccchH
Confidence            99999999999999999999999999999999999999999999887655       79999999999999999999999


Q ss_pred             hhhhccCCCcccccccchhhhhhhhhHHHHHHHHHHHhcceeEeeccccCcccceeEEeeccCceeccchhhhhhHHHHH
Q 011017          321 FASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIE  400 (495)
Q Consensus       321 ~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~ie  400 (495)
                      |||+||+||+  +   +||||||||+| +++|+++|+|||||++|+|+|||+++|||+||||||||++|+++|+||++||
T Consensus       313 ~~s~as~p~~--~---~~~l~~~wp~~-~~~m~~~w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie  386 (620)
T PLN02869        313 FASLASKPYI--S---KWYLRLMWPVT-SWSMMLTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIE  386 (620)
T ss_pred             HHHhccCCcc--c---hhHHHHHHHHH-HHHHHHHHHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHH
Confidence            9999999999  7   99999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHH
Q 011017          401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA  480 (495)
Q Consensus       401 ~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a  480 (495)
                      |||+||||+||||+|||+|||||+|||||||||+||| +|||||||||||||||||||||+|||||||||++  ||||||
T Consensus       387 ~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p-~L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~--sK~~ra  463 (620)
T PLN02869        387 EAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNL--SKVAYF  463 (620)
T ss_pred             HHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCC-CcceEEEeCCchHHHHHHHhcCCCCceEEEecCc--cHHHHH
Confidence            9999999999999999999999999999999999999 9999999999999999999999999999999999  799999


Q ss_pred             HHHHHhhcCcEee
Q 011017          481 VASSLCQMGIKVS  493 (495)
Q Consensus       481 ~a~~lc~~~~~v~  493 (495)
                      ||+|||||||||+
T Consensus       464 ia~~lc~r~i~~~  476 (620)
T PLN02869        464 IASALCQRGIQVA  476 (620)
T ss_pred             HHHHHHhcCCeEe
Confidence            9999999999963

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]	Back alignment and domain information

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]	Back alignment and domain information

>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]	Back alignment and domain information

>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]	Back alignment and domain information

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases	Back alignment and domain information

>PLN02434 fatty acid hydroxylase	Back alignment and domain information

>PRK14982 acyl-ACP reductase; Provisional	Back alignment and domain information

>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]	Back alignment and domain information

>PLN02601 beta-carotene hydroxylase	Back alignment and domain information

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated	Back alignment and domain information

>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1	Back alignment and domain information

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional	Back alignment and domain information

>COG5322 Predicted dehydrogenase [General function prediction only]	Back alignment and domain information

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]	Back alignment and domain information

>PRK07985 oxidoreductase; Provisional	Back alignment and domain information

>PLN02780 ketoreductase/ oxidoreductase	Back alignment and domain information

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]	Back alignment and domain information

>PRK05866 short chain dehydrogenase; Provisional	Back alignment and domain information

>PRK06128 oxidoreductase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		495
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 44.1 bits (103), Expect = 1e-04
 Identities = 54/400 (13%), Positives = 115/400 (28%), Gaps = 102/400 (25%)

Query: 151 HHHYLYSRYHSHHHSSVVTEPI----TSVIHPFAEHIVY-FLLFAIPLVTTMVLKNASIA 205
           HHH        HHH    T         ++  F +  V  F    +  +   +L    I 
Sbjct: 1   HHH--------HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID 52

Query: 206 SFVG---------YI----------IYVDFMNNMGHCNFEFIPMWLFTVF------PPLK 240
             +           +          +   F+  +   N++    +L +        P + 
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK----FLMSPIKTEQRQPSMM 108

Query: 241 FLMYTPSYHSLH----------------HTQFRTN-YSLFMPIYDYIYGTIDRSSDSVYE 283
             MY      L+                + + R     L       I G +  S  +   
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG-SGKTWVA 167

Query: 284 KSLKRSGEEEEESADDVDVVHLTHLTTPESI--------YHLRIGFASLASKPHRYTYTL 335
             +  S + + +    +  ++L +  +PE++        Y +   + S +         +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 336 SQWYLQLLWPFTASCSVLVSWIYGRTF-----VSESNTLDKLKL--QTWVVPRYIVQYNL 388
                +L         +L S  Y         V  +   +   L  +  +  R+      
Sbjct: 228 HSIQAELR-------RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF------ 274

Query: 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI---YLERQPNKLKIKVV 445
              ++  + L         A     ISL   +     +    +   YL+ +P  L  +V+
Sbjct: 275 ---KQVTDFL--------SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL 485
             +    +++  S+    A       V  +K+   + SSL
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		495
3ctm_A		279	Carbonyl reductase; alcohol dehydrogenase, short-c	88.71
3ppi_A		281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	88.13
3tjr_A		301	Short chain dehydrogenase; structural genomics, se	86.41
1xg5_A		279	ARPG836; short chain dehydrogenase, human, SGC, st	86.08
4imr_A		275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	86.07
3uf0_A		273	Short-chain dehydrogenase/reductase SDR; gluconate	86.01
1yb1_A		272	17-beta-hydroxysteroid dehydrogenase type XI; shor	85.92
2c07_A		285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	85.88
3r1i_A		276	Short-chain type dehydrogenase/reductase; structur	85.59
4dry_A		281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	85.51
3ijr_A		291	Oxidoreductase, short chain dehydrogenase/reducta;	85.35
3v2g_A		271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	85.2
3cxt_A		291	Dehydrogenase with different specificities; rossma	84.75
3rih_A		293	Short chain dehydrogenase or reductase; structural	84.53
3r3s_A		294	Oxidoreductase; structural genomics, csgid, center	84.43
2qhx_A		328	Pteridine reductase 1; oxidoreductase, short-chain	84.29
3kvo_A		346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	83.45
1p9o_A		313	Phosphopantothenoylcysteine synthetase; ligase; 2.	82.81
3oec_A		317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	82.79
3grk_A		293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	82.05
3k31_A		296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	81.58

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}	Back alignment and structure

Probab=88.71  E-value=0.21  Score=47.64  Aligned_cols=38  Identities=21%  Similarity=0.282  Sum_probs=31.1

Q ss_pred             hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017          455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF  494 (495)
Q Consensus       455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~  494 (495)
                      +.+..+-.-|.|++||++  +-+|+++|..|.++|.+|++
T Consensus        26 ~~~~~~l~~k~vlITGas--ggIG~~la~~L~~~G~~V~~   63 (279)
T 3ctm_A           26 VLDLFSLKGKVASVTGSS--GGIGWAVAEAYAQAGADVAI   63 (279)
T ss_dssp             GGGGGCCTTCEEEETTTT--SSHHHHHHHHHHHHTCEEEE
T ss_pred             cccccCCCCCEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence            344444445789999999  68999999999999999975

PyMOL of 3ctm

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}	Back alignment and structure

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}	Back alignment and structure

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2	Back alignment and structure

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}	Back alignment and structure

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0	Back alignment and structure

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2	Back alignment and structure

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2	Back alignment and structure

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}	Back alignment and structure

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}	Back alignment and structure

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*	Back alignment and structure

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}	Back alignment and structure

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}	Back alignment and structure

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}	Back alignment and structure

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2	Back alignment and structure

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}	Back alignment and structure

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1	Back alignment and structure

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}	Back alignment and structure

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*	Back alignment and structure

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		495
d2jfga1		93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	83.7

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=83.70  E-value=0.32  Score=37.72  Aligned_cols=28  Identities=11%  Similarity=0.112  Sum_probs=25.5

Q ss_pred             ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017          464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF  494 (495)
Q Consensus       464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~  494 (495)
                      |.|++.|..   |-|+++|.+|+++|.+|.+
T Consensus         6 K~v~ViGlG---~sG~s~a~~L~~~g~~v~~   33 (93)
T d2jfga1           6 KNVVIIGLG---LTGLSCVDFFLARGVTPRV   33 (93)
T ss_dssp             CCEEEECCS---HHHHHHHHHHHHTTCCCEE
T ss_pred             CEEEEEeEC---HHHHHHHHHHHHCCCEEEE
Confidence            568999997   9999999999999999986

PyMOL of d2jfga1