Citrus Sinensis ID: 011061

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----
MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
ccccHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHccccEEEEEEcccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHcccccEEEEccccEEEEEEccccccEEEEcccccccccccEEEccccccEEEEEEEEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccEEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHcccHHHHHEEEEEEEEEccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEccccccccEEEcccccccccHHHHHHHHHHcc
cccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHccccEEEEEEccccccEEEccccccHHHHHHHcccccHHHHHHHHHHHHHHcccEEEEEEccccEEEEEEccccccEEEEcccHHHcccccEEEcccccEEEEEEEEEccccEEcHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHcHcHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccHHHHHccccccccHHHHHHHHHHcc
MFQAEEEALLFQQHavgensgqfeetVHPYISKVlmegnfkpskteQDHAFLLQLLFWFKqtfrwvnappcdgcsnetvgqgmgtplpseiQYGAARVELFRCKVcskitrfpryndplklvetkrgrcgewanCFTLYCRAFGYESRLILDFTDhvwtecfsqslgrwmhldpcegiydrpllyekgWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMErdlystddapvslpgrqsgdkewrisrseigsddncslscsscpvrvcIDEHVTTIYNAFSSVLSHfvennvpksgAIELLKILKGILgdlkkspyktrrvslnsvpnngqkiVHQLLPSIGHLLRVLSLKselntdgrvdivlagdpvktslslpVVFKALDDMIHdlnncdnfgkgsfclpllklnrihsgsvlasgeefpfgivtsafdgirpskweDLMAREVVG
MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCskitrfpryndplklvetkrgrcgewANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAiskdgvfdvTKRYTRKwhevlsrrniateqtVSAVLAKMTRECRrsfasetlstledrdkcEREAMErdlystddapvslpgrqsgdkewRISRSeigsddncslsCSSCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVslnsvpnngqKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVlagdpvktslSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPVSLPGRQSGDKEWRISRSEIGSDDNcslscsscPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIEllkilkgilgdlkkSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
***********************EETVHPYISKVLMEGNF******QDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTR************************************************************NCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKW**********
*FQAEEEALL************************************QDHAFLLQLLFWFKQTFRWVNAPPCDGCS******************GAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECR********STLEDRDK**************************************************PVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRR***********KIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVV*
MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSN*******GTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLY*************************************SCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
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MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWEDLMAREVVG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query494 2.2.26 [Sep-21-2011]
Q9FGY9 721 Peptide-N(4)-(N-acetyl-be yes no 0.983 0.674 0.593 1e-173
Q7F0R1447 Peptide-N(4)-(N-acetyl-be yes no 0.585 0.646 0.633 1e-119
Q503I8644 Peptide-N(4)-(N-acetyl-be yes no 0.506 0.388 0.464 9e-58
Q5ZJM3651 Peptide-N(4)-(N-acetyl-be yes no 0.483 0.367 0.459 4e-57
Q9JI78651 Peptide-N(4)-(N-acetyl-be yes no 0.477 0.362 0.456 7e-54
Q6CAX5356 Peptide-N(4)-(N-acetyl-be yes no 0.5 0.693 0.426 6e-53
Q4R6F3654 Peptide-N(4)-(N-acetyl-be N/A no 0.473 0.357 0.452 9e-53
Q96IV0654 Peptide-N(4)-(N-acetyl-be yes no 0.473 0.357 0.452 2e-52
Q5XI55651 Peptide-N(4)-(N-acetyl-be yes no 0.469 0.356 0.452 7e-52
Q4IR87451 Protein PNG1 OS=Gibberell yes no 0.538 0.589 0.375 6e-50
>sp|Q9FGY9|PNG1_ARATH Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Arabidopsis thaliana GN=PNG1 PE=2 SV=1 Back     alignment and function desciption
 Score =  607 bits (1565), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 306/516 (59%), Positives = 383/516 (74%), Gaps = 30/516 (5%)

Query: 1   MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLM------------------------ 36
           M QAEE+A++FQQ     ++G+FE  + PY+S+VLM                        
Sbjct: 94  MLQAEEDAIMFQQFVAARDNGEFEGRIRPYVSQVLMYEDPVRQDAARKTVPKDELEEKAL 153

Query: 37  -----EGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEI 91
                EGNF+PSK E+D+AFLLQLLFWFK++FRWVN PPCD C N+T+GQGMG PL SE+
Sbjct: 154 VSLAKEGNFEPSKEERDYAFLLQLLFWFKKSFRWVNEPPCDFCGNKTIGQGMGNPLTSEL 213

Query: 92  QYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLIL 151
            YGA RVE++RC +C   TRFPRYNDPLKLVETK+GRCGEWANCFTLYCR FGY+SRLI+
Sbjct: 214 AYGANRVEIYRCTMCPTTTRFPRYNDPLKLVETKKGRCGEWANCFTLYCRTFGYDSRLIM 273

Query: 152 DFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRY 211
           DFTDHVWTEC+S SL RW+HLDPCEG+YD+P+LYEKGWNKKLNYVIAISKDGV DVTKRY
Sbjct: 274 DFTDHVWTECYSHSLKRWIHLDPCEGVYDKPMLYEKGWNKKLNYVIAISKDGVCDVTKRY 333

Query: 212 TRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYST 271
           T+KWHEVLSRR + TE ++   L  +TRE RRS   E+LS LE RD+ E+E +ER+L+S 
Sbjct: 334 TKKWHEVLSRRTLTTESSLQDGLRTLTRERRRSLMFESLSKLELRDRNEQEELERNLHSA 393

Query: 272 DDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSH 331
           D+A VSLPGRQSGD+EWRI RSE GSD+N S+S SSCPVR C+D+HVT IY++F  +L+ 
Sbjct: 394 DNASVSLPGRQSGDREWRIMRSEFGSDENSSVSSSSCPVRKCVDDHVTNIYDSFLPILTQ 453

Query: 332 FVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLR 391
           FVE+ +P +   E+LK++K +L DLK +PYKTR+  L    +N      Q LP++G LL 
Sbjct: 454 FVEDGLPVARTNEVLKMIKQVLVDLKNAPYKTRKARLTLDSDNSSSFPEQFLPALGDLLL 513

Query: 392 VLSLKSELNTDGR-VDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLL 450
            LSLKSE +T+G+ V I + G   KT+++LPV   AL +++ DL+   N  K S   PL+
Sbjct: 514 ALSLKSERDTNGKSVTISVDGKLTKTAIALPVALDALRELVADLSKYQNLNKDSLSFPLV 573

Query: 451 KLNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWED 486
           K NR+ SGSVLASGEE P GI T+AFDGI+ SKWE+
Sbjct: 574 KQNRVCSGSVLASGEELPSGIATAAFDGIQESKWEE 609
Specifically deglycosylates the denatured form of N-linked glycoproteins in the cytoplasm and assists their proteasome-mediated degradation. Cleaves the beta-aspartyl-glucosamine (GlcNAc) of the glycan and the amide side chain of Asn, converting Asn to Asp. Prefers proteins containing high-mannose over those bearing complex type oligosaccharides. Can recognize misfolded proteins in the endoplasmic reticulun that are exported in the cytosol to be destroyed and deglycosylate them, while it has no activity toward native proteins. Deglycosylation is prerequisite for subsequent proteasome-mediated degradation of some, but not all, misfolded glycoproteins.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 5EC: 2
>sp|Q7F0R1|PNG1_ORYSJ Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Oryza sativa subsp. japonica GN=PNG1 PE=2 SV=1 Back     alignment and function description
>sp|Q503I8|NGLY1_DANRE Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Danio rerio GN=ngly1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJM3|NGLY1_CHICK Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Gallus gallus GN=NGLY1 PE=2 SV=1 Back     alignment and function description
>sp|Q9JI78|NGLY1_MOUSE Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Mus musculus GN=Ngly1 PE=1 SV=2 Back     alignment and function description
>sp|Q6CAX5|PNG1_YARLI Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PNG1 PE=3 SV=1 Back     alignment and function description
>sp|Q4R6F3|NGLY1_MACFA Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Macaca fascicularis GN=NGLY1 PE=2 SV=1 Back     alignment and function description
>sp|Q96IV0|NGLY1_HUMAN Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Homo sapiens GN=NGLY1 PE=1 SV=1 Back     alignment and function description
>sp|Q5XI55|NGLY1_RAT Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Rattus norvegicus GN=Ngly1 PE=2 SV=2 Back     alignment and function description
>sp|Q4IR87|PNG1_GIBZE Protein PNG1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PNG1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query494
225451303 726 PREDICTED: peptide-N(4)-(N-acetyl-beta-g 0.983 0.669 0.664 0.0
356573070 715 PREDICTED: peptide-N(4)-(N-acetyl-beta-g 0.973 0.672 0.642 0.0
255542316 719 peptide n-glycanase, putative [Ricinus c 0.965 0.663 0.651 0.0
356505935 720 PREDICTED: peptide-N(4)-(N-acetyl-beta-g 0.973 0.668 0.642 0.0
357512279 717 Peptide-N(4)-(N-acetyl-beta-glucosaminyl 0.973 0.670 0.627 0.0
297795715 721 hypothetical protein ARALYDRAFT_495017 [ 0.983 0.674 0.608 1e-179
449442921 611 PREDICTED: peptide-N(4)-(N-acetyl-beta-g 0.937 0.757 0.634 1e-177
449482972 611 PREDICTED: peptide-N(4)-(N-acetyl-beta-g 0.937 0.757 0.632 1e-176
350539878 725 putative peptide:N-glycanase [Solanum ly 0.983 0.670 0.596 1e-175
15240508 721 peptide-N(4)-(N-acetyl-beta-glucosaminyl 0.983 0.674 0.593 1e-171
>gi|225451303|ref|XP_002278422.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Vitis vinifera] gi|298204879|emb|CBI34186.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/515 (66%), Positives = 402/515 (78%), Gaps = 29/515 (5%)

Query: 1   MFQAEEEALLFQQHAVGENSGQFEETVHPYISKVLM------------------------ 36
           M QAEEEAL+FQQ+   +N  + +  + PY+ +VLM                        
Sbjct: 101 MLQAEEEALMFQQYIAYDNGAEMKRKIRPYVEQVLMYEDPKRQEAARKTVPVLELEEKAL 160

Query: 37  -----EGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEI 91
                EGNFKPSKTEQDHAFLLQLLFWFKQ+FRWV+APPCD C N+T+  GMG+PLPSE 
Sbjct: 161 VSLAKEGNFKPSKTEQDHAFLLQLLFWFKQSFRWVDAPPCDSCGNQTISYGMGSPLPSEA 220

Query: 92  QYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLIL 151
            +G +RVEL+RC  CS ITRFPRYNDPLKLVET++GRCGEWANCFTLYCRAFGYESRLIL
Sbjct: 221 LFGGSRVELYRCNSCSTITRFPRYNDPLKLVETRKGRCGEWANCFTLYCRAFGYESRLIL 280

Query: 152 DFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRY 211
           DFTDHVWTECFS   GRWMHLDPCE I+D PLLYEKGWNKKLNY+IAI+KDGV+DVTKRY
Sbjct: 281 DFTDHVWTECFSHCFGRWMHLDPCEAIFDNPLLYEKGWNKKLNYIIAIAKDGVYDVTKRY 340

Query: 212 TRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYST 271
           TRKWHEVLSRRNI TE  +SAVLA +T++CR+ F S+ LSTLE+RD+ E EA+ER+ +S 
Sbjct: 341 TRKWHEVLSRRNITTEAELSAVLAIITKDCRKGFTSQVLSTLEERDRNEMEAIEREYHSK 400

Query: 272 DDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCSSCPVRVCIDEHVTTIYNAFSSVLSH 331
           D A   LPGRQSGDKEWRISRSE GSDDN SLS SSCPVR+CIDEHVT +YNA   VL  
Sbjct: 401 DYASTLLPGRQSGDKEWRISRSEFGSDDNSSLSSSSCPVRMCIDEHVTRVYNALYPVLYS 460

Query: 332 FVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLR 391
           F+ N++ KS A+E+LK+ K I+ +L+ SP++ R+ S+ S  ++G+  V Q+LPS G LL 
Sbjct: 461 FILNSLSKSRAVEILKMFKRIVVELRDSPFRMRKTSIKSDSSSGKFFVDQMLPSFGELLE 520

Query: 392 VLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLK 451
            LSLKSEL TDGRV+I LAGDPVKTSL+LPVV   LDD IH+ +NC+NFGK S  LPL+K
Sbjct: 521 ALSLKSELGTDGRVEICLAGDPVKTSLALPVVLDGLDDAIHNFSNCENFGKDSLSLPLVK 580

Query: 452 LNRIHSGSVLASGEEFPFGIVTSAFDGIRPSKWED 486
           LNRI SG VLASGEE PFGI TSAFDGI+ SKWE+
Sbjct: 581 LNRICSGFVLASGEELPFGIATSAFDGIQKSKWEE 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356573070|ref|XP_003554688.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255542316|ref|XP_002512221.1| peptide n-glycanase, putative [Ricinus communis] gi|223548182|gb|EEF49673.1| peptide n-glycanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356505935|ref|XP_003521744.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357512279|ref|XP_003626428.1| Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Medicago truncatula] gi|355501443|gb|AES82646.1| Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297795715|ref|XP_002865742.1| hypothetical protein ARALYDRAFT_495017 [Arabidopsis lyrata subsp. lyrata] gi|297311577|gb|EFH42001.1| hypothetical protein ARALYDRAFT_495017 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449442921|ref|XP_004139229.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449482972|ref|XP_004156458.1| PREDICTED: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|350539878|ref|NP_001234560.1| putative peptide:N-glycanase [Solanum lycopersicum] gi|303306032|gb|ADM13644.1| putative peptide:N-glycanase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|15240508|ref|NP_199768.1| peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Arabidopsis thaliana] gi|75170522|sp|Q9FGY9.1|PNG1_ARATH RecName: Full=Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase; AltName: Full=Peptide:N-glycanase; Short=AtPNG1 gi|10177623|dbj|BAB10770.1| unnamed protein product [Arabidopsis thaliana] gi|22655232|gb|AAM98206.1| unknown protein [Arabidopsis thaliana] gi|28059472|gb|AAO30061.1| unknown protein [Arabidopsis thaliana] gi|110736284|dbj|BAF00112.1| hypothetical protein [Arabidopsis thaliana] gi|148589112|emb|CAN87017.1| transglutaminase [Arabidopsis thaliana] gi|332008448|gb|AED95831.1| peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query494
TAIR|locus:2157869 721 PNG1 "peptide-N-glycanase 1" [ 0.910 0.624 0.611 1.5e-162
UNIPROTKB|E1BKB2657 NGLY1 "Uncharacterized protein 0.597 0.449 0.411 6.6e-58
UNIPROTKB|F1NWD4651 NGLY1 "Peptide-N(4)-(N-acetyl- 0.506 0.384 0.460 8.4e-58
UNIPROTKB|Q5ZJM3651 NGLY1 "Peptide-N(4)-(N-acetyl- 0.506 0.384 0.460 1.4e-57
UNIPROTKB|E2R815655 NGLY1 "Uncharacterized protein 0.512 0.386 0.457 2e-56
UNIPROTKB|F1PRF1578 NGLY1 "Uncharacterized protein 0.512 0.437 0.457 2e-56
ZFIN|ZDB-GENE-050522-535644 ngly1 "N-glycanase 1" [Danio r 0.506 0.388 0.470 2.5e-56
UNIPROTKB|F1RS44655 NGLY1 "Uncharacterized protein 0.564 0.425 0.426 6.8e-56
MGI|MGI:1913276651 Ngly1 "N-glycanase 1" [Mus mus 0.512 0.388 0.445 2.3e-55
RGD|1308518651 Ngly1 "N-glycanase 1" [Rattus 0.506 0.384 0.459 7.8e-55
TAIR|locus:2157869 PNG1 "peptide-N-glycanase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1499 (532.7 bits), Expect = 1.5e-162, Sum P(2) = 1.5e-162
 Identities = 276/451 (61%), Positives = 339/451 (75%)

Query:    37 EGNFKPSKTEQDHAFLLQLLFWFKQTFRWVNAPPCDGCSNETVGQGMGTPLPSEIQYGAA 96
             EGNF+PSK E+D+AFLLQLLFWFK++FRWVN PPCD C N+T+GQGMG PL SE+ YGA 
Sbjct:   159 EGNFEPSKEERDYAFLLQLLFWFKKSFRWVNEPPCDFCGNKTIGQGMGNPLTSELAYGAN 218

Query:    97 RVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDH 156
             RVE++RC +C   TRFPRYNDPLKLVETK+GRCGEWANCFTLYCR FGY+SRLI+DFTDH
Sbjct:   219 RVEIYRCTMCPTTTRFPRYNDPLKLVETKKGRCGEWANCFTLYCRTFGYDSRLIMDFTDH 278

Query:   157 VWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWH 216
             VWTEC+S SL RW+HLDPCEG+YD+P+LYEKGWNKKLNYVIAISKDGV DVTKRYT+KWH
Sbjct:   279 VWTECYSHSLKRWIHLDPCEGVYDKPMLYEKGWNKKLNYVIAISKDGVCDVTKRYTKKWH 338

Query:   217 EVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPV 276
             EVLSRR + TE ++   L  +TRE RRS   E+LS LE RD+ E+E +ER+L+S D+A V
Sbjct:   339 EVLSRRTLTTESSLQDGLRTLTRERRRSLMFESLSKLELRDRNEQEELERNLHSADNASV 398

Query:   277 SLPGRQSGDKEWRISRSEIGSDDNXXXXXXXXPVRVCIDEHVTTIYNAFSSVLSHFVENN 336
             SLPGRQSGD+EWRI RSE GSD+N        PVR C+D+HVT IY++F  +L+ FVE+ 
Sbjct:   399 SLPGRQSGDREWRIMRSEFGSDENSSVSSSSCPVRKCVDDHVTNIYDSFLPILTQFVEDG 458

Query:   337 VPKSGAIEXXXXXXXXXXXXXXSPYKTRRVSLNSVPNNGQKIVHQLLPSIGHLLRVLSLK 396
             +P +   E              +PYKTR+  L    +N      Q LP++G LL  LSLK
Sbjct:   459 LPVARTNEVLKMIKQVLVDLKNAPYKTRKARLTLDSDNSSSFPEQFLPALGDLLLALSLK 518

Query:   397 SELNTDGR-VDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRI 455
             SE +T+G+ V I + G   KT+++LPV   AL +++ DL+   N  K S   PL+K NR+
Sbjct:   519 SERDTNGKSVTISVDGKLTKTAIALPVALDALRELVADLSKYQNLNKDSLSFPLVKQNRV 578

Query:   456 HSGSVLASGEEFPFGIVTSAFDGIRPSKWED 486
              SGSVLASGEE P GI T+AFDGI+ SKWE+
Sbjct:   579 CSGSVLASGEELPSGIATAAFDGIQESKWEE 609
GO:0003684 "damaged DNA binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=ISS
GO:0005634 "nucleus" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006289 "nucleotide-excision repair" evidence=IEA
GO:0000224 "peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity" evidence=IGI;IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0010188 "response to microbial phytotoxin" evidence=IEP
GO:0010193 "response to ozone" evidence=IEP
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
UNIPROTKB|E1BKB2 NGLY1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWD4 NGLY1 "Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZJM3 NGLY1 "Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2R815 NGLY1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PRF1 NGLY1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-535 ngly1 "N-glycanase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RS44 NGLY1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1913276 Ngly1 "N-glycanase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308518 Ngly1 "N-glycanase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FGY9PNG1_ARATH3, ., 5, ., 1, ., 5, 20.59300.98380.6740yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.520.914
3rd Layer3.5.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031149001
SubName- Full=Chromosome chr14 scaffold_54, whole genome shotgun sequence; (745 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00030328001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (395 aa)
    ••  0.833
GSVIVG00025212001
SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (386 aa)
    ••  0.827

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query494
pfam01841108 pfam01841, Transglut_core, Transglutaminase-like s 3e-16
smart0046068 smart00460, TGc, Transglutaminase/protease-like ho 1e-10
pfam03835142 pfam03835, Rad4, Rad4 transglutaminase-like domain 8e-07
TIGR00605713 TIGR00605, rad4, DNA repair protein rad4 2e-04
COG1305319 COG1305, COG1305, Transglutaminase-like enzymes, p 0.002
>gnl|CDD|216735 pfam01841, Transglut_core, Transglutaminase-like superfamily Back     alignment and domain information 
 Score = 74.4 bits (183), Expect = 3e-16
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 95  AARVELFRCK--VCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILD 152
           A  +  +  K        R P  +D  +++ T +G CG++A+ F    RA G  +R +  
Sbjct: 18  AKAIYDYVRKNITYDAPGRSPGDDDAEEVLFTGKGVCGDFASLFVALLRALGIPARYVTG 77

Query: 153 FTD----------HVWTECFSQSLGRWMHLDP 174
           +            H W E +    G W+ +DP
Sbjct: 78  YLRGPDTVRNGDAHAWVEVYLPGYG-WVPVDP 108

This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologues of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease. Length = 108
>gnl|CDD|214673 smart00460, TGc, Transglutaminase/protease-like homologues Back     alignment and domain information
>gnl|CDD|217753 pfam03835, Rad4, Rad4 transglutaminase-like domain Back     alignment and domain information
>gnl|CDD|233048 TIGR00605, rad4, DNA repair protein rad4 Back     alignment and domain information
>gnl|CDD|224224 COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 494
KOG0909500 consensus Peptide:N-glycanase [Posttranslational m 100.0
PF03835145 Rad4: Rad4 transglutaminase-like domain; InterPro: 99.86
TIGR00605713 rad4 DNA repair protein rad4. This family is based 99.78
PF01841113 Transglut_core: Transglutaminase-like superfamily; 99.51
COG1305319 Transglutaminase-like enzymes, putative cysteine p 99.42
smart0046068 TGc Transglutaminase/protease-like homologues. Tra 99.42
KOG2179669 consensus Nucleotide excision repair complex XPC-H 99.09
COG5535650 RAD4 DNA repair protein RAD4 [DNA replication, rec 98.11
PF04473153 DUF553: Transglutaminase-like domain; InterPro: IP 97.34
COG5279521 CYK3 Uncharacterized protein involved in cytokines 95.25
PF13369152 Transglut_core2: Transglutaminase-like superfamily 93.37
PF14402313 7TM_transglut: 7 transmembrane helices usually fus 91.95
PF14381204 EDR1: Ethylene-responsive protein kinase Le-CTR1 91.5
PF13471117 Transglut_core3: Transglutaminase-like superfamily 88.16
COG1571421 Predicted DNA-binding protein containing a Zn-ribb 87.36
PF1276046 Zn_Tnp_IS1595: Transposase zinc-ribbon domain; Int 84.34
>KOG0909 consensus Peptide:N-glycanase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-106  Score=830.56  Aligned_cols=391  Identities=41%  Similarity=0.724  Sum_probs=358.6

Q ss_pred             HhhcCcccccccccchhhHHhh-------------------------c-CCCCCCCCccHHHHHHHHHHHhhcc-CEeec
Q 011061           15 AVGENSGQFEETVHPYISKVLM-------------------------E-GNFKPSKTEQDHAFLLQLLFWFKQT-FRWVN   67 (494)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~vl~-------------------------~-g~~~p~~~e~~~~~l~~LL~wFK~~-F~wv~   67 (494)
                      ++.....+|.+.|++|+++|+|                         + -++.+++.+.|..+..+||+|||++ |+|||
T Consensus        81 ~a~~~~~~Fle~l~~~sqhvlvYEDP~lq~~Als~iPvdEL~~kA~ekla~~eg~ki~kdy~i~leLL~WFKq~FF~WvN  160 (500)
T KOG0909|consen   81 SALRATNAFLEVLRSYSQHVLVYEDPVLQAKALSTIPVDELKEKASEKLAKAEGEKIYKDYLIKLELLNWFKQDFFKWVN  160 (500)
T ss_pred             hhhhcchHHHHHHHHhccCceeecCHHHHHHHHhcCCHHHHHHHHHHhhcccchhhhhcchHHHHHHHHHHHHhhheecC
Confidence            3334556799999999999998                         1 2236788888887778999999998 79999


Q ss_pred             CCCCCCCCCCc-cccCCCCCChhhhhcCCceEEEeeeCCCCcccccCCCCCHHHHHHhCCccchhHHHHHHHHHHHcCCC
Q 011061           68 APPCDGCSNET-VGQGMGTPLPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYE  146 (494)
Q Consensus        68 ~P~C~~Cg~~t-~~~g~~~p~~~E~~~ga~~VE~Y~C~~C~~~~RFPRyn~p~~LL~tR~GrCgE~A~lF~~~~RAlGlp  146 (494)
                      +|||+.||++| ...|.++|+-+|.++||++||+|+|+.||+.+||||||||.+||+||+|||||||||||++|||+|++
T Consensus       161 ~PpC~~CG~et~~~l~~~~p~eeE~~~Ga~rVEiy~C~~C~~~~RFPRYNdp~kLLeTRkGRCGEWANCFTllcralg~d  240 (500)
T KOG0909|consen  161 NPPCNKCGGETSSGLGNQPPNEEEKKFGAGRVEIYKCNRCGTETRFPRYNDPIKLLETRKGRCGEWANCFTLLCRALGLD  240 (500)
T ss_pred             CCCcccccccccccccCCCCchhHhhcCCceEEEEEecCCCCcccCcccCCHHHHHhhccCccchHHHHHHHHHHHcCCc
Confidence            99999999999 56788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCceEEEEeeCCCCCeEEeccCCCcCCCCeeeecCccCccceEEeecCCcceechhhhccChHHhhhhccccc
Q 011061          147 SRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIAT  226 (494)
Q Consensus       147 AR~V~~~~dHvW~EVy~~~~~rWV~vDP~e~~iD~PllYE~gWgKklSYVIAFs~DGv~DVTrRYt~~~~~~~~RR~rv~  226 (494)
                      ||||||.+||||+|||++.++|||||||||+++|+|+||+.||||+|+|||||++|||+||||||+.+|.+++.+|+.|.
T Consensus       241 aR~i~d~tDHVWtEvYS~~qqRW~HvDpcE~v~D~PllYe~GW~KklsY~iafgkD~VvDVT~RYi~~h~e~~~~R~~~~  320 (500)
T KOG0909|consen  241 ARYIWDRTDHVWTEVYSNAQQRWVHVDPCENVFDKPLLYEIGWGKKLSYCIAFGKDGVVDVTWRYILDHKENLLPRDLCK  320 (500)
T ss_pred             ceEEeecCcchhHHhhhhhhheeEeecccccccccceeeecccCcccceEEEeccCceEeeehhhhccchhhccchhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCHHHhhhhhhhcHHHHHHHhhhhcCCCCCCCCCCCCccccHHHHHhhcCCCCCCCCCcCCC
Q 011061          227 EQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERDLYSTDDAPVSLPGRQSGDKEWRISRSEIGSDDNCSLSCS  306 (494)
Q Consensus       227 E~wl~~~L~~l~~~~R~~ls~ee~~~Le~Rd~~E~~EL~~~~~~~~~~~~~l~GRqSGS~eWr~aRGE~G~~~~~s~~~s  306 (494)
                      |+.++.+|..||+++|.++++++++.|+.||++|+.||.+...+..++..+||||||||++||.+|||+|.         
T Consensus       321 E~~l~~~l~~in~~rr~~lt~~r~~~L~~rd~~e~~El~~~~~~~~~~~~~L~GR~SGs~eWr~~RGE~G~---------  391 (500)
T KOG0909|consen  321 ESVLQQTLQFINKRRRYSLTDDRKKELAQRDEREQIELIRGKTPETPTKSSLPGRQSGSVEWRAQRGEDGK---------  391 (500)
T ss_pred             hHHHHHHHHHHHHHHHhhcChHHHHHHHhhhHHHHHHHHhccccCCCCCCCCCCcccccHHHHHhhccccc---------
Confidence            99999999999999999999999999999999999999999988888899999999999999999999998         


Q ss_pred             CCCceeccccceeeEeecchhhhhccccCCCchhhHHHHHHHHHHHHhhccCCCcccccccccCCCCchhHHHHhh-hcc
Q 011061          307 SCPVRVCIDEHVTTIYNAFSSVLSHFVENNVPKSGAIELLKILKGILGDLKKSPYKTRRVSLNSVPNNGQKIVHQL-LPS  385 (494)
Q Consensus       307 ~cp~r~c~dehv~~iY~a~~~~ls~~~~~~~~~~~a~~~~~~~r~~~~dlk~~~fk~R~~~~~~~~~~~~~~~~~~-lps  385 (494)
                                |++ ||+.+-       +   |.+++|++..|||++|.||||+ |++|.+--+-..++     +.+ +-+
T Consensus       392 ----------h~~-i~D~~~-------~---~~~~~~e~~~i~r~ve~Dw~mt-ylaR~~~~s~~~is-----w~fd~~~  444 (500)
T KOG0909|consen  392 ----------HNT-IYDSYT-------E---WSAQAFELENIFRKVETDWKMT-YLARLEGDSPGNIS-----WHFDFKL  444 (500)
T ss_pred             ----------cce-ehhhhh-------h---HHHHHHHHHHHHHHHHhhHHHH-HHHHhcCCCCcccc-----chhhhhh
Confidence                      888 888766       1   8999999999999999999999 99999865555544     444 348


Q ss_pred             HHHHHHhhccccccCCCCCeEEEecCCccccccchhHhHHHHHHHHHhcccccCCCCCcccccccccccccccceeeccc
Q 011061          386 IGHLLRVLSLKSELNTDGRVDIVLAGDPVKTSLSLPVVFKALDDMIHDLNNCDNFGKGSFCLPLLKLNRIHSGSVLASGE  465 (494)
Q Consensus       386 ~~~ll~~lslk~~~~~~g~~~~~~~~~p~~tsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~g~~~a~~e  465 (494)
                      .+.++.++||+.++.|.|+=             ++||.+||.+.. .++++-.++.                        
T Consensus       445 ~~~~~~~~~l~~~~qtf~~g-------------~~~v~~D~s~~s-ad~~~a~~l~------------------------  486 (500)
T KOG0909|consen  445 KGLKVKSESLMAEIQTFGKG-------------CMRVTIDASALS-ADPSNATILK------------------------  486 (500)
T ss_pred             cccHHHHHHHHhhhhhcCCC-------------ceEeeechhccc-CCcccCceee------------------------
Confidence            89999999999999999874             889999999887 7777744432                        


Q ss_pred             ccccceeeccccCCCcccc
Q 011061          466 EFPFGIVTSAFDGIRPSKW  484 (494)
Q Consensus       466 ~~p~g~~~~afdg~~~~kw  484 (494)
                           |+|.+|+|+.-.||
T Consensus       487 -----i~t~~~~g~~~~~w  500 (500)
T KOG0909|consen  487 -----IRTELFSGKGDVKW  500 (500)
T ss_pred             -----eehhhcCCccccCC
Confidence                 99999999999999

>PF03835 Rad4: Rad4 transglutaminase-like domain; InterPro: IPR018325 RAD4/Xp-C proteins contain an ancient transglutaminase fold that is also found in peptide-N-glycanases (PNGases), which remove glycans from glycoproteins during their degradation Back     alignment and domain information
>TIGR00605 rad4 DNA repair protein rad4 Back     alignment and domain information
>PF01841 Transglut_core: Transglutaminase-like superfamily; InterPro: IPR002931 This domain is found in many proteins known to have transglutaminase activity, i Back     alignment and domain information
>COG1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] Back     alignment and domain information
>smart00460 TGc Transglutaminase/protease-like homologues Back     alignment and domain information
>KOG2179 consensus Nucleotide excision repair complex XPC-HR23B, subunit XPC/DPB11 [Replication, recombination and repair] Back     alignment and domain information
>COG5535 RAD4 DNA repair protein RAD4 [DNA replication, recombination, and repair] Back     alignment and domain information
>PF04473 DUF553: Transglutaminase-like domain; InterPro: IPR007562 This entry represents a transglutaminase-like domain found in a family of uncharacterised archaeal proteins that had previously been called DUF553 and UPF0252 Back     alignment and domain information
>COG5279 CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] Back     alignment and domain information
>PF13369 Transglut_core2: Transglutaminase-like superfamily Back     alignment and domain information
>PF14402 7TM_transglut: 7 transmembrane helices usually fused to an inactive transglutaminase Back     alignment and domain information
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1 Back     alignment and domain information
>PF13471 Transglut_core3: Transglutaminase-like superfamily Back     alignment and domain information
>COG1571 Predicted DNA-binding protein containing a Zn-ribbon domain [General function prediction only] Back     alignment and domain information
>PF12760 Zn_Tnp_IS1595: Transposase zinc-ribbon domain; InterPro: IPR024442 This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query494
2f4m_A295 The Mouse Pngase-Hr23 Complex Reveals A Complete Re 5e-51
1x3z_A335 Structure Of A Peptide:n-Glycanase-Rad23 Complex Le 4e-45
1x3w_A335 Structure Of A Peptide:n-Glycanase-Rad23 Complex Le 1e-44
3esw_A355 Complex Of Yeast Pngase With Glcnac2-Iac Length = 3 7e-44
>pdb|2F4M|A Chain A, The Mouse Pngase-Hr23 Complex Reveals A Complete Remodulation Of The Protein-Protein Interface Compared To Its Yeast Orthologs Length = 295 Back     alignment and structure 
Iteration: 1

 Score =  198 bits (504), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 58  WFKQTF-RWVNAPPCDGCSNETVGQGMGT-PLPSEIQYGAARVELFRCKVCSKITRFPRY 115
           WFK+ F RWVN   C  C  ET  +     P   E+++GA  VE   C  C    RFPRY
Sbjct: 70  WFKEEFFRWVNNIVCSKCGGETRSRDEALLPNDDELKWGAKNVENHYCDACQLSNRFPRY 129
Query: 116 NDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPC 175
           N+P KL+ET+ GRCGEWANCFTL CRA G+E+R + D+TDHVWTE +S S  RW+H D C
Sbjct: 130 NNPEKLLETRCGRCGEWANCFTLCCRALGFEARYVWDYTDHVWTEVYSPSQQRWLHCDAC 189
Query: 176 EGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLA 235
           E + D+PLLYE GW KKL+Y+IA SKD V DVT RY+ K  EV+SRR    E+ +   + 
Sbjct: 190 EDVCDKPLLYEIGWGKKLSYIIAFSKDEVVDVTWRYSCKHDEVMSRRTKVKEELLRETIN 249
Query: 236 KMTRECRRSFASETLSTLEDR 256
            + ++ + S +      L  R
Sbjct: 250 GLNKQRQLSLSESRRKELLQR 270
>pdb|1X3Z|A Chain A, Structure Of A Peptide:n-Glycanase-Rad23 Complex Length = 335 Back     alignment and structure
>pdb|1X3W|A Chain A, Structure Of A Peptide:n-Glycanase-Rad23 Complex Length = 335 Back     alignment and structure
>pdb|3ESW|A Chain A, Complex Of Yeast Pngase With Glcnac2-Iac Length = 355 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query494
1x3z_A335 Peptide: N-glycanase; hydrolase-hydrolase inhibito 7e-89
2f4m_A295 Peptide N-glycanase; glycoproteins, ubiquitin-depe 2e-85
2qsf_A533 RAD4, DNA repair protein RAD4; alpha-beta structur 2e-27
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A* Length = 335 Back     alignment and structure
 Score =  274 bits (702), Expect = 7e-89
 Identities = 93/258 (36%), Positives = 137/258 (53%), Gaps = 11/258 (4%)

Query: 32  SKVLMEGNFKPSKTEQDHAFLLQLLFWFKQTF-RWVNAPPCDGCSNET----VGQGMGTP 86
            +   +G+ +      D   + +LL +FKQ F +W N P C+ C   T       G   P
Sbjct: 83  KEFAKDGHAEGENIYTD-YLVKELLRYFKQDFFKWCNKPDCNHCGQNTSENMTPLGSQGP 141

Query: 87  LPSEIQYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYE 146
              E ++    VE+++C  C  ITRFPRYNDP+KL+ET++GRCGEW N FTL  ++FG +
Sbjct: 142 NGEESKFNCGTVEIYKCNRCGNITRFPRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLD 201

Query: 147 SRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFD 206
            R + +  DHVW E FS  L RW+H+D CE  +D+P +Y   WNKK++Y IA  KDGV D
Sbjct: 202 VRYVWNREDHVWCEYFSNFLNRWVHVDSCEQSFDQPYIYSINWNKKMSYCIAFGKDGVVD 261

Query: 207 VTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMER 266
           V+KRY  +       R+   E+ +  +   +T+  R S   + +  L  RD+ E+  + R
Sbjct: 262 VSKRYILQNE---LPRDQIKEEDLKFLCQFITKRLRYSLNDDEIYQLACRDEQEQIELIR 318

Query: 267 DLYSTDDAPVSLPGRQSG 284
               T +         S 
Sbjct: 319 --GKTQETKSESVSAASK 334
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A* Length = 295 Back     alignment and structure
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A* Length = 533 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query494
1x3z_A335 Peptide: N-glycanase; hydrolase-hydrolase inhibito 100.0
2f4m_A295 Peptide N-glycanase; glycoproteins, ubiquitin-depe 100.0
2qsf_A533 RAD4, DNA repair protein RAD4; alpha-beta structur 99.97
3isr_A293 Transglutaminase-like enzymes, putative cysteine; 99.52
2g9g_A221 Pngase, peptide N-glycanase; beta-sandwich, hydrol 99.4
2q3z_A687 Transglutaminase 2; transglutaminase 2, tissue tra 98.96
1ex0_A731 Coagulation factor XIII A chain; transglutaminase, 98.81
1vjj_A692 Protein-glutamine glutamyltransferase E; transglut 98.73
1g0d_A695 Protein-glutamine gamma-glutamyltransferase; tissu 98.69
3kd4_A506 Putative protease; structural genomics, joint cent 98.46
2i74_A189 Pngase; beta-sandwich, hydrolase; HET: MAN; 1.75A 97.16
4fgq_A193 Periplasmic protein; DUF920, protease, calcium bin 94.74
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A* Back     alignment and structure
Probab=100.00  E-value=4e-74  Score=580.33  Aligned_cols=226  Identities=40%  Similarity=0.807  Sum_probs=213.1

Q ss_pred             CCCCCCCCccHHHHHHHHHHHhhcc-CEeecCCCCCCCCCCc---cc-cCCCCCChhhhhcCCceEEEeeeCCCCccccc
Q 011061           38 GNFKPSKTEQDHAFLLQLLFWFKQT-FRWVNAPPCDGCSNET---VG-QGMGTPLPSEIQYGAARVELFRCKVCSKITRF  112 (494)
Q Consensus        38 g~~~p~~~e~~~~~l~~LL~wFK~~-F~wv~~P~C~~Cg~~t---~~-~g~~~p~~~E~~~ga~~VE~Y~C~~C~~~~RF  112 (494)
                      |..+|.+. .++++|++||+|||++ |+|||+|||+.||+++   .. +|+.+|+++|..+||++||+|+|+.||+.+||
T Consensus        89 ~~~~~~~~-~~d~ll~~LL~WFk~~fF~wvn~p~C~~Cg~~~~~~~~~~g~~~p~~~E~~~ga~~vE~y~C~~C~~~~rF  167 (335)
T 1x3z_A           89 GHAEGENI-YTDYLVKELLRYFKQDFFKWCNKPDCNHCGQNTSENMTPLGSQGPNGEESKFNCGTVEIYKCNRCGNITRF  167 (335)
T ss_dssp             CSSSSCTH-HHHHHHHHHHHHHHHTTCEECSSCCCSSSCSSCCSSEEEEEEECCCSGGGSSSEEEEEEEEETTTCCEEEE
T ss_pred             CCCCCccc-hhHHHHHHHHHHHHhcCCEeeCCCCccccCCCccccccccCCCCCChhhhccCCceEEEeecCCCCccccc
Confidence            33456655 4556999999999998 8999999999999985   45 59999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHhCCccchhHHHHHHHHHHHcCCCEEEEEeCCCceEEEEeeCCCCCeEEeccCCCcCCCCeeeecCccCc
Q 011061          113 PRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKK  192 (494)
Q Consensus       113 PRyn~p~~LL~tR~GrCgE~A~lF~~~~RAlGlpAR~V~~~~dHvW~EVy~~~~~rWV~vDP~e~~iD~PllYE~gWgKk  192 (494)
                      ||||+|.+||+||+|+|+|||+||+++|||+|+|||||+|+++|+|+|||+++.++|||||||++++|+|++|+.||+|+
T Consensus       168 PRYn~~~~ll~tr~G~C~e~A~lF~~llRalGi~aR~V~~~~~H~W~EV~~~~~~rWv~vDp~~~~id~P~~ye~gw~k~  247 (335)
T 1x3z_A          168 PRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLDVRYVWNREDHVWCEYFSNFLNRWVHVDSCEQSFDQPYIYSINWNKK  247 (335)
T ss_dssp             EEECCHHHHHHHCEECHHHHHHHHHHHHHTTTCCEEEEEETTTEEEEEEEETTTTEEEEEETTTTEESCTHHHHTTSCCC
T ss_pred             CCcCCHHHHHHhCCcChHHHHHHHHHHHHHCCCCeEEEecCCCcEEEEEEECCCCCEEEECCCCCccCCCceeecCCCCc
Confidence            99999999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             cceEEeecCCcceechhhhccChHHhhhhcccccHHHHHHHHHHHHHHHHccCCHHHhhhhhhhcHHHHHHHhhh
Q 011061          193 LNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMERD  267 (494)
Q Consensus       193 lSYVIAFs~DGv~DVTrRYt~~~~~~~~RR~rv~E~wl~~~L~~l~~~~R~~ls~ee~~~Le~Rd~~E~~EL~~~  267 (494)
                      |+|||||++||++|||+||+.+ + . .+|.+|+|+||..+|..||+++|.++|++++..|++||+.|..||...
T Consensus       248 msYVIAFs~dgv~DVT~RY~~~-~-~-lrR~rv~e~wl~~~L~~l~~~~r~~~s~~e~~~L~~Rd~~E~~EL~~~  319 (335)
T 1x3z_A          248 MSYCIAFGKDGVVDVSKRYILQ-N-E-LPRDQIKEEDLKFLCQFITKRLRYSLNDDEIYQLACRDEQEQIELIRG  319 (335)
T ss_dssp             BCCEEEEETTEEEECHHHHCSS-S-B-CCCCSSCHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEcCCCCEECHHHhCcC-C-c-cccccCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHhhcc
Confidence            9999999999999999999999 4 4 388899999999999999999999999999999999999999999855
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A* Back     alignment and structure
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A* Back     alignment and structure
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii} Back     alignment and structure
>2g9g_A Pngase, peptide N-glycanase; beta-sandwich, hydrolase; 2.00A {Mus musculus} SCOP: b.18.1.29 Back     alignment and structure
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A* Back     alignment and structure
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A Back     alignment and structure
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A* Back     alignment and structure
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 Back     alignment and structure
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>2i74_A Pngase; beta-sandwich, hydrolase; HET: MAN; 1.75A {Mus musculus} SCOP: b.18.1.29 PDB: 2g9f_A Back     alignment and structure
>4fgq_A Periplasmic protein; DUF920, protease, calcium binding, hydrolase; 1.65A {Legionella pneumophila subsp} PDB: 4fgo_A 4fgp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 494
d1x3za1320 d.3.1.4 (A:8-327) Peptide:N-glycanase 1, PNG1 {Bak 2e-94
d2f4ma1287 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {M 8e-87
>d1x3za1 d.3.1.4 (A:8-327) Peptide:N-glycanase 1, PNG1 {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]} Length = 320 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Peptide:N-glycanase 1, PNG1
species: Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  287 bits (736), Expect = 2e-94
 Identities = 91/235 (38%), Positives = 133/235 (56%), Gaps = 9/235 (3%)

Query: 37  EGNFKPSKTEQDHAFLLQLLFWFKQT-FRWVNAPPCDGCSNET----VGQGMGTPLPSEI 91
           +G+ +      D   + +LL +FKQ  F+W N P C+ C   T       G   P   E 
Sbjct: 88  DGHAEGENIYTD-YLVKELLRYFKQDFFKWCNKPDCNHCGQNTSENMTPLGSQGPNGEES 146

Query: 92  QYGAARVELFRCKVCSKITRFPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLIL 151
           ++    VE+++C  C  ITRFPRYNDP+KL+ET++GRCGEW N FTL  ++FG + R + 
Sbjct: 147 KFNCGTVEIYKCNRCGNITRFPRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLDVRYVW 206

Query: 152 DFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNKKLNYVIAISKDGVFDVTKRY 211
           +  DHVW E FS  L RW+H+D CE  +D+P +Y   WNKK++Y IA  KDGV DV+KRY
Sbjct: 207 NREDHVWCEYFSNFLNRWVHVDSCEQSFDQPYIYSINWNKKMSYCIAFGKDGVVDVSKRY 266

Query: 212 TRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMER 266
             +       R+   E+ +  +   +T+  R S   + +  L  RD+ E+  + R
Sbjct: 267 ILQNE---LPRDQIKEEDLKFLCQFITKRLRYSLNDDEIYQLACRDEQEQIELIR 318
>d2f4ma1 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query494
d1x3za1320 Peptide:N-glycanase 1, PNG1 {Baker's yeast(Sacchar 100.0
d2f4ma1287 Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) 100.0
d2g9ga1108 Peptide:N-glycanase, PNGase, C-terminal domain {Mo 99.16
d2q3za4316 Transglutaminase catalytic domain {Human (Homo sap 98.5
d1ex0a4320 Transglutaminase catalytic domain {Human (Homo sap 97.64
d1g0da4321 Transglutaminase catalytic domain {Red sea bream ( 97.64
d1vjja4321 Transglutaminase catalytic domain {Human (Homo sap 97.59
d2i74a1180 Peptide:N-glycanase, PNGase, C-terminal domain {Mo 96.82
>d1x3za1 d.3.1.4 (A:8-327) Peptide:N-glycanase 1, PNG1 {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Peptide:N-glycanase 1, PNG1
species: Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-79  Score=611.04  Aligned_cols=226  Identities=40%  Similarity=0.807  Sum_probs=217.5

Q ss_pred             cCCCCCCCCccHHHHHHHHHHHhhcc-CEeecCCCCCCCCCCcc----ccCCCCCChhhhhcCCceEEEeeeCCCCcccc
Q 011061           37 EGNFKPSKTEQDHAFLLQLLFWFKQT-FRWVNAPPCDGCSNETV----GQGMGTPLPSEIQYGAARVELFRCKVCSKITR  111 (494)
Q Consensus        37 ~g~~~p~~~e~~~~~l~~LL~wFK~~-F~wv~~P~C~~Cg~~t~----~~g~~~p~~~E~~~ga~~VE~Y~C~~C~~~~R  111 (494)
                      +++..|++.++|. +|++||+|||++ |+|||+|||+.||++|.    .+|+++||++|..+||++||+|+|+.||+.+|
T Consensus        88 ~~~~~~~~~y~d~-~l~eLl~wFk~~fF~wvn~p~C~~Cg~~t~~~~~~~g~~~p~~~e~~~~a~~vE~y~C~~C~~~~R  166 (320)
T d1x3za1          88 DGHAEGENIYTDY-LVKELLRYFKQDFFKWCNKPDCNHCGQNTSENMTPLGSQGPNGEESKFNCGTVEIYKCNRCGNITR  166 (320)
T ss_dssp             CCSSSSCTHHHHH-HHHHHHHHHHHTTCEECSSCCCSSSCSSCCSSEEEEEEECCCSGGGSSSEEEEEEEEETTTCCEEE
T ss_pred             hccCCccccHHHH-HHHHHHHHHHhhhceecCCCCCCcCCCCcccccccccCCCCCchhhcCCCCeEEEEECCCCCCccc
Confidence            6778899998885 999999999998 79999999999999874    56889999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHhCCccchhHHHHHHHHHHHcCCCEEEEEeCCCceEEEEeeCCCCCeEEeccCCCcCCCCeeeecCccC
Q 011061          112 FPRYNDPLKLVETKRGRCGEWANCFTLYCRAFGYESRLILDFTDHVWTECFSQSLGRWMHLDPCEGIYDRPLLYEKGWNK  191 (494)
Q Consensus       112 FPRyn~p~~LL~tR~GrCgE~A~lF~~~~RAlGlpAR~V~~~~dHvW~EVy~~~~~rWV~vDP~e~~iD~PllYE~gWgK  191 (494)
                      |||||+|.+||+||+||||||||||+++|||+|++||||||++||+|+|||++.+++|||||||++++|+|++|++||+|
T Consensus       167 FPRyn~p~~LL~tR~GRcgEwan~F~~~~ra~g~~aR~V~~~~DhvW~EVys~~~kRWIhvDpce~~id~P~lye~gw~k  246 (320)
T d1x3za1         167 FPRYNDPIKLLETRKGRCGEWCNLFTLILKSFGLDVRYVWNREDHVWCEYFSNFLNRWVHVDSCEQSFDQPYIYSINWNK  246 (320)
T ss_dssp             EEEECCHHHHHHHCEECHHHHHHHHHHHHHTTTCCEEEEEETTTEEEEEEEETTTTEEEEEETTTTEESCTHHHHTTSCC
T ss_pred             cCCcCCHHHHHhhcCcchHHHHHHHHHHHHHcCCceEEEEECCCceEEEEeecccCeEEEEcCCCCccCCcceeccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceEEeecCCcceechhhhccChHHhhhhcccccHHHHHHHHHHHHHHHHccCCHHHhhhhhhhcHHHHHHHhh
Q 011061          192 KLNYVIAISKDGVFDVTKRYTRKWHEVLSRRNIATEQTVSAVLAKMTRECRRSFASETLSTLEDRDKCEREAMER  266 (494)
Q Consensus       192 klSYVIAFs~DGv~DVTrRYt~~~~~~~~RR~rv~E~wl~~~L~~l~~~~R~~ls~ee~~~Le~Rd~~E~~EL~~  266 (494)
                      +|+|||||+.|||+|||+||+.++.   .||++|+|+||..+|+.+++++|.+++++++..|+.||..|..||.+
T Consensus       247 ~msYVIAf~~dgv~DVT~RY~~k~~---~rR~rv~E~wl~~~L~~l~~~~r~~~s~~e~~~L~~RD~~E~~ELl~  318 (320)
T d1x3za1         247 KMSYCIAFGKDGVVDVSKRYILQNE---LPRDQIKEEDLKFLCQFITKRLRYSLNDDEIYQLACRDEQEQIELIR  318 (320)
T ss_dssp             CBCCEEEEETTEEEECHHHHCSSSB---CCCCSSCHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEEecCCcceechhhhccccc---CccccCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHhHHHHHHHhcc
Confidence            9999999999999999999999863   58999999999999999999999999999999999999999999974
>d2f4ma1 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2g9ga1 b.18.1.29 (A:454-561) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2q3za4 d.3.1.4 (A:146-461) Transglutaminase catalytic domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1ex0a4 d.3.1.4 (A:191-510) Transglutaminase catalytic domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1g0da4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Red sea bream (Chrysophrys major) [TaxId: 143350]} Back     information, alignment and structure
>d1vjja4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Human (Homo sapiens), TGase E3 [TaxId: 9606]} Back     information, alignment and structure
>d2i74a1 b.18.1.29 (A:472-651) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure