Citrus Sinensis ID: 011080
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | 2.2.26 [Sep-21-2011] | |||||||
| P93338 | 496 | NADP-dependent glyceralde | N/A | no | 0.995 | 0.991 | 0.898 | 0.0 | |
| Q8LK61 | 496 | NADP-dependent glyceralde | N/A | no | 0.993 | 0.989 | 0.878 | 0.0 | |
| Q9SNX8 | 496 | NADP-dependent glyceralde | N/A | no | 0.995 | 0.991 | 0.866 | 0.0 | |
| Q43272 | 498 | NADP-dependent glyceralde | N/A | no | 0.993 | 0.985 | 0.867 | 0.0 | |
| Q1WIQ6 | 496 | NADP-dependent glyceralde | yes | no | 0.995 | 0.991 | 0.868 | 0.0 | |
| P81406 | 496 | NADP-dependent glyceralde | N/A | no | 0.995 | 0.991 | 0.894 | 0.0 | |
| Q3C1A6 | 476 | NADP-dependent glyceralde | N/A | no | 0.949 | 0.985 | 0.523 | 1e-137 | |
| Q59931 | 475 | NADP-dependent glyceralde | yes | no | 0.947 | 0.985 | 0.517 | 1e-137 | |
| Q8VXQ7 | 233 | NADP-dependent glyceralde | N/A | no | 0.471 | 1.0 | 0.751 | 1e-103 | |
| P42329 | 488 | Aldehyde dehydrogenase, t | N/A | no | 0.931 | 0.942 | 0.342 | 4e-72 |
| >sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/493 (89%), Positives = 470/493 (95%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
VF +I+ E V+K++ +G W+KS+SGKSV IINPTTRK ++VQACTQEEVNKV+E AK
Sbjct: 5 GVFVDII-EGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVMEVAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQKSWAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 64 TAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPAL
Sbjct: 124 TAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNS+VLKPPTQGAVA LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP ++CISF
Sbjct: 184 IAGNSLVLKPPTQGAVACLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVHCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDLAA +IVKGGFSYSGQRCTAVKV
Sbjct: 244 TGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLAAGSIVKGGFSYSGQRCTAVKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKV AKVAKLTVG PEDDCDITPVV+ESSANFIEGLVMDAKQK ATFC
Sbjct: 304 VLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKNATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
Q+YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV
Sbjct: 364 QQYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+DINKAILISDAMETGTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTK+K+
Sbjct: 424 FTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLPTPSYT+G
Sbjct: 484 TVINLPTPSYTMG 496
|
Important as a means of generating NADPH for biosynthetic reactions. Nicotiana plumbaginifolia (taxid: 4092) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 9 |
| >sp|Q8LK61|GAPN_WHEAT NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2 | Back alignment and function description |
|---|
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/492 (87%), Positives = 467/492 (94%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
VF +++D VYK++ DG WR S+SGK+V I+NPTTR+ +RVQACTQEEVNKV++ AK+
Sbjct: 6 VFADVLDGE-VYKYYADGEWRASASGKTVAIVNPTTRQTQYRVQACTQEEVNKVMDAAKV 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQKSWA+TPLWKRAELLHKAAAILKE K PIAE LVKEIAKPAKDAV+EVVRSGDLVSY
Sbjct: 65 AQKSWARTPLWKRAELLHKAAAILKEHKTPIAESLVKEIAKPAKDAVSEVVRSGDLVSYT 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGKLLVSDSFPGNER KYCL+SK+PLGVVLAIPPFNYPVNLAVSKI PALI
Sbjct: 125 AEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNS+VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGM+PLQMELGGKDACI+LEDADLDL AANIVKGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
L+ME+VADT+VEKV AK+AKL VG PEDD DITPVVTESSANFIEGLVMDAK+K ATFCQ
Sbjct: 305 LIMEAVADTVVEKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EY+REGNLIWPLLLD+VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDINKAI+ISDAME+GTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTK+KST
Sbjct: 425 TRDINKAIMISDAMESGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKST 484
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 485 VINLPSPSYTMG 496
|
Important as a means of generating NADPH for biosynthetic reactions. Triticum aestivum (taxid: 4565) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9SNX8|GAPN_APIGR NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1 | Back alignment and function description |
|---|
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/493 (86%), Positives = 464/493 (94%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
V+ +I+ E V+K++ DG W+KSSSGKSV IINPTTR F+VQACTQEEVNK +ETAK
Sbjct: 5 GVYADII-EGDVFKYYSDGEWKKSSSGKSVAIINPTTRMTQFKVQACTQEEVNKAMETAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
QK WAKTPLWKRAELLHKAAAILKE KA IA+CLVKEIAKPAKD+VTEVVRSGDLVSY
Sbjct: 64 KVQKQWAKTPLWKRAELLHKAAAILKEHKAAIADCLVKEIAKPAKDSVTEVVRSGDLVSY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
CAEEGVR+LGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKI PAL
Sbjct: 124 CAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGN++VLKPPTQGAVA LHMVHCFHLAGFPKGLISC+TGKGSEIGDFLTMHP +NCISF
Sbjct: 184 IAGNALVLKPPTQGAVACLHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPGVNCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTGI+ISKKAGM+PLQMELGGKDACI+LEDADLDL A+N++KGGFSYSGQRCTA+KV
Sbjct: 244 TGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVASNVIKGGFSYSGQRCTAIKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVM+SVADTLVEKV AKVAKLTVG PED+ DITPVV+ESSANFIEGLV DAK+K ATFC
Sbjct: 304 ILVMQSVADTLVEKVNAKVAKLTVGPPEDNSDITPVVSESSANFIEGLVKDAKEKGATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
QEYKREGNLIWPLLLDNV+PDMRIAWEEPFGP+LPVIRINS EEGIHHCNASNFGLQGCV
Sbjct: 364 QEYKREGNLIWPLLLDNVKPDMRIAWEEPFGPILPVIRINSAEEGIHHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FTRDINKA+LISDAME+GT+QINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTKIK+
Sbjct: 424 FTRDINKAMLISDAMESGTIQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKIKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLP+PSYT+G
Sbjct: 484 TVINLPSPSYTMG 496
|
Important as a means of generating NADPH for biosynthetic reactions. May be a main source of cytosolic NADPH for mannitol biosynthesis in leaves. Apium graveolens (taxid: 4045) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q43272|GAPN_MAIZE NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/492 (86%), Positives = 464/492 (94%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
VF EI+D VY+++ DG WR S+SGKSV I+NPTTRK +RVQACTQEEVNK ++ AK+
Sbjct: 8 VFAEILDGE-VYRYYADGEWRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKV 66
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK+WA+TPLWKRA++LHKAAAILKE KAPIAECLVKEIAKPAKDAV+EVVRSGDLVSY
Sbjct: 67 AQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYT 126
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGKL+VSDSFPGNER KYCL+SKIPLGVVLAIPPFNYP NLA SKI PALI
Sbjct: 127 AEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALI 186
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGN++VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 187 AGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFT 246
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGM+PLQMELGGKDACI+LEDADLDL +ANIVKGGFSYSGQRCTAVKV
Sbjct: 247 GGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVSANIVKGGFSYSGQRCTAVKVV 306
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
L+MES+AD +V+KV AK+AKL VG PEDD DITPVVTESSANFIEGLVMDAK+K ATFCQ
Sbjct: 307 LIMESIADAVVQKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQ 366
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EY+REGNLIWPLLLD+VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC+F
Sbjct: 367 EYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIF 426
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDINKAILISDAMETGTVQINSAP+RGPDHF FQGLKDSGIGSQGITNSINMMTK+KST
Sbjct: 427 TRDINKAILISDAMETGTVQINSAPARGPDHFSFQGLKDSGIGSQGITNSINMMTKVKST 486
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 487 VINLPSPSYTMG 498
|
Important as a means of generating NADPH for biosynthetic reactions. Zea mays (taxid: 4577) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q1WIQ6|GAPN_ARATH NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/493 (86%), Positives = 467/493 (94%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
+F EI+D VYK++ DG W+ SSSGKSV I+NP TRK ++VQACTQEEVN V+E AK
Sbjct: 5 GLFAEILDGE-VYKYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQKSWAKTPLWKRAELLHKAAAILK+ KAP+AE LVKEIAKPAKD+VTEVVRSGDL+SY
Sbjct: 64 SAQKSWAKTPLWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
CAEEGVRILGEGK L+SDSFPGN+RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL
Sbjct: 124 CAEEGVRILGEGKFLLSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNS+VLKPPTQGAV+ LHMVHCFHLAGFPKGLISC+TGKGSEIGDFLTMHP++NCISF
Sbjct: 184 IAGNSLVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPAVNCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTGISISKKAGMIPLQMELGGKDACI+L+DADLDL A+NI+KGGFSYSGQRCTAVKV
Sbjct: 244 TGGDTGISISKKAGMIPLQMELGGKDACIVLDDADLDLVASNIIKGGFSYSGQRCTAVKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKVKAKVAKLTVG PE++ DIT VV+ESSANFIEGLVMDAK+K ATFC
Sbjct: 304 VLVMESVADELVEKVKAKVAKLTVGPPEENSDITAVVSESSANFIEGLVMDAKEKGATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPV+PV+RINSVEEGI+HCNASNFGLQGCV
Sbjct: 364 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+DINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQG+TNSIN+MTK+K+
Sbjct: 424 FTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLPTPSY++G
Sbjct: 484 TVINLPTPSYSMG 496
|
Important as a means of generating NADPH for biosynthetic reactions. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|P81406|GAPN_PEA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1 | Back alignment and function description |
|---|
Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/493 (89%), Positives = 471/493 (95%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
V EI+D + VYK++ DG W+KS+SGKSV IINPTTRKP ++VQAC+QEEVNKV+++AK
Sbjct: 5 GVLAEIIDGD-VYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQKSWAKTPLWKRAELLHKAAAILKE KA IAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 64 SAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
CAEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPAL
Sbjct: 124 CAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISF
Sbjct: 184 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTGI+ISKK+GMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 244 TGGDTGIAISKKSGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKVK KVAKL+VG PEDD DITPVV+ESSANFIEGLV DAK+K ATFC
Sbjct: 304 VLVMESVADALVEKVKVKVAKLSVGPPEDDSDITPVVSESSANFIEGLVNDAKEKGATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV
Sbjct: 364 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+DINKAI+ISDAME+GTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTK+K+
Sbjct: 424 FTKDINKAIMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLP+PSYT+G
Sbjct: 484 TVINLPSPSYTMG 496
|
Important as a means of generating NADPH for biosynthetic reactions. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q3C1A6|GAPN_STREI NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1 | Back alignment and function description |
|---|
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/474 (52%), Positives = 320/474 (67%), Gaps = 5/474 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P T + V A +QEEV+ V +AK AQK+W
Sbjct: 5 YKNYVNGEWKLSK--EEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKAWRALSYV 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RAE LHKAA IL I L KEIAK K AV EV+R+ ++++Y AEEGVR+ EG
Sbjct: 63 ERAEYLHKAADILMRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRL--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYP+NLA SKIAPALI+GN + LKPPT
Sbjct: 121 EVLEGGSFDPASKKKIAIVRREPVGLVLAISPFNYPINLAGSKIAPALISGNVVALKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISK 252
QG+++ L + F AG P G+ + +TG+GS IGD++ H ++N I+FTG G I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSVIGDYIVEHEAVNYINFTGSTPVGEHIGH 240
Query: 253 KAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
AGM P+ +ELGGKD+ IILEDADLDLAA NIV G + YSGQRCTAVK LVM+S+AD L
Sbjct: 241 LAGMRPIMLELGGKDSAIILEDADLDLAAKNIVAGAYGYSGQRCTAVKRVLVMDSIADKL 300
Query: 313 VEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372
VEKV A V LTVG PED+ DITP++ +A+++EGL+ DA++K A +KREGNLI
Sbjct: 301 VEKVSALVNNLTVGMPEDNADITPLIDTKAADYVEGLIKDAQEKGAKEVISFKREGNLIS 360
Query: 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432
P+L DNV DMR+AWEEPFGPVLP IR+NSVEE I N S +GLQ VFT + A I
Sbjct: 361 PVLFDNVTTDMRLAWEEPFGPVLPFIRVNSVEEAIEISNKSEYGLQASVFTNNFPLAFKI 420
Query: 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KSTV ++
Sbjct: 421 AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGVQGVKYSIEAMTTVKSTVFDI 474
|
Catalyzes the irreversible NADP-dependent oxidation of glyceraldehyde-3-phosphate to 3-phosphoglycerate. Is not able to use NAD instead of NADP. May play an important role in NADPH production in S.equinus. Streptococcus equinus (taxid: 1335) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q59931|GAPN_STRMU NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=gapN PE=1 SV=2 | Back alignment and function description |
|---|
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/475 (51%), Positives = 317/475 (66%), Gaps = 7/475 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 120
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 121 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGIS--IS 251
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG TGI I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTG-STGIGERIG 239
Query: 252 KKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADT 311
K AGM P+ +ELGGKD+ I+LEDADL+L A NI+ G F YSGQRCTAVK LVMESVAD
Sbjct: 240 KMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 312 LVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
LVEK++ KV LT+G PEDD DITP++ SA+++EGL+ DA K A E KREGNLI
Sbjct: 300 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLI 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
|
Streptococcus mutans (taxid: 1309) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q8VXQ7|GAPN_SCEVA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Scenedesmus vacuolatus GN=GapN PE=2 SV=1 | Back alignment and function description |
|---|
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/233 (75%), Positives = 201/233 (86%)
Query: 161 LAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVT 220
LAIPPFNYPVNLAVSK+APAL+AGN++VLKPP+QG VA +HM+ CF AG P G ++ VT
Sbjct: 1 LAIPPFNYPVNLAVSKLAPALMAGNTVVLKPPSQGVVAGIHMIKCFQAAGLPAGTVNLVT 60
Query: 221 GKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLA 280
GKGSEIGDFLT HP++NCISFTGGDTGI+IS+KAGM+PLQMELGGKDACI+ DADLDLA
Sbjct: 61 GKGSEIGDFLTTHPAVNCISFTGGDTGIAISRKAGMVPLQMELGGKDACIVCSDADLDLA 120
Query: 281 AANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTE 340
A +I+KGGFSYSGQRCTAVKV LVM+ +AD LV KV A V KL VG PED+ DIT VV+E
Sbjct: 121 ATHIIKGGFSYSGQRCTAVKVVLVMQDIADELVRKVHAGVQKLKVGRPEDNADITAVVSE 180
Query: 341 SSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGP 393
SANFI+GLV DAK K ATF ++KREGNL+WP+LLDNV DMRIAWEEPFGP
Sbjct: 181 GSANFIQGLVEDAKAKGATFLTDWKREGNLLWPVLLDNVTADMRIAWEEPFGP 233
|
Important as a means of generating NADPH for biosynthetic reactions. Scenedesmus vacuolatus (taxid: 77546) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 9 |
| >sp|P42329|ALDH_GEOSE Aldehyde dehydrogenase, thermostable OS=Geobacillus stearothermophilus GN=aldHT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 258/488 (52%), Gaps = 28/488 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y + +G W S S INP R VQ T E+VN+ V A AQ SW K
Sbjct: 10 YFNYINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSG 69
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+R E L+KAA IL++ IAE + +E+ K +A E +R ++ Y A EG R +G
Sbjct: 70 VERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIG- 128
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
D P ++ T+++PLGVV I P+N+PV + + K+APAL+ GN++VLKP
Sbjct: 129 ------DVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPA 182
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISK 252
++ AV A ++ CFH AGFPKG+++ V G GS +G + HP I+ ++FTG +T + K
Sbjct: 183 SETAVTAAKVIECFHEAGFPKGVVNMVCGSGSVVGQGIANHPDIDGVTFTGSNT---VGK 239
Query: 253 KAGMIPL------QMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
+ G Q+E+GGK+ I+ +DADLDLA + GG +GQ+CTA +
Sbjct: 240 QVGRAAFERGAKYQLEMGGKNPVIVAKDADLDLAVEGTISGGLRSTGQKCTATSRVFIER 299
Query: 307 SVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK 365
V + K+ +V +L +G D + + P +ES + + + K + A
Sbjct: 300 EVYEPFKAKLLERVKQLKIGNGLDAETWMGPCASESQFHTVLSYIEKGKSEGAKLIYGGN 359
Query: 366 R--EGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
R EG L + P + ++V M IA EE FGPVL +I+++S+EE I N + +GL
Sbjct: 360 RCLEGELANGFFVEPTIFEDVDLQMTIAREEIFGPVLALIQVDSIEEAIKLANDTEYGLS 419
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGS--QGITNSINMM 476
++T++I A+ +E G +++N+ + PF G+K S S QG +I
Sbjct: 420 ASIYTKNIGNALEFIKDIEAGLIKVNAETAGVEFQAPFGGMKQSSSHSREQG-QAAIEFF 478
Query: 477 TKIKSTVI 484
T IK+ +
Sbjct: 479 TSIKTVFV 486
|
Oxidizes several aliphatic aldehydes, particularly c6-aliphatic aldehyde and hexanal, but does not oxidize benzaldehyde. Geobacillus stearothermophilus (taxid: 1422) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | ||||||
| 255548762 | 497 | NADP-dependent glyceraldehyde-3-phosphat | 0.997 | 0.991 | 0.916 | 0.0 | |
| 224141947 | 498 | predicted protein [Populus trichocarpa] | 0.997 | 0.989 | 0.910 | 0.0 | |
| 449523177 | 496 | PREDICTED: NADP-dependent glyceraldehyde | 0.995 | 0.991 | 0.906 | 0.0 | |
| 449442981 | 496 | PREDICTED: NADP-dependent glyceraldehyde | 0.993 | 0.989 | 0.908 | 0.0 | |
| 357480129 | 496 | NADP-dependent glyceraldehyde-3-phosphat | 0.993 | 0.989 | 0.902 | 0.0 | |
| 225445885 | 496 | PREDICTED: NADP-dependent glyceraldehyde | 0.993 | 0.989 | 0.904 | 0.0 | |
| 217075002 | 496 | unknown [Medicago truncatula] gi|3884965 | 0.993 | 0.989 | 0.900 | 0.0 | |
| 147821263 | 496 | hypothetical protein VITISV_034728 [Viti | 0.993 | 0.989 | 0.902 | 0.0 | |
| 2494076 | 496 | RecName: Full=NADP-dependent glyceraldeh | 0.995 | 0.991 | 0.898 | 0.0 | |
| 356562585 | 497 | PREDICTED: NADP-dependent glyceraldehyde | 0.993 | 0.987 | 0.894 | 0.0 |
| >gi|255548762|ref|XP_002515437.1| NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative [Ricinus communis] gi|223545381|gb|EEF46886.1| NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/493 (91%), Positives = 471/493 (95%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
VF +IVD +GVYKF+ DG WRKSSSGKSV IINPTT K HF+VQACTQEEVNK++E+AK
Sbjct: 5 GVFADIVDGDGVYKFYTDGEWRKSSSGKSVPIINPTTTKIHFKVQACTQEEVNKIIESAK 64
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQK WAKTPLWKRAELLHKAAAILKE K PIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 65 SAQKGWAKTPLWKRAELLHKAAAILKEHKVPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 124
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
CAEEGVRILGEG+ LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL
Sbjct: 125 CAEEGVRILGEGRFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 184
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNS+VLKPPTQGA AALHM+HCFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISF
Sbjct: 185 IAGNSLVLKPPTQGAAAALHMIHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISF 244
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTGI+ISKKA MIPLQMELGGKDACI+LEDADLDLA ANIVKGGFSYSGQRCTAVKV
Sbjct: 245 TGGDTGIAISKKASMIPLQMELGGKDACIVLEDADLDLAVANIVKGGFSYSGQRCTAVKV 304
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKVKAK AKLTVG PEDDCDITPVVTESSANFIEGLVMDAKQK ATFC
Sbjct: 305 VLVMESVADILVEKVKAKAAKLTVGPPEDDCDITPVVTESSANFIEGLVMDAKQKGATFC 364
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPV+PVIR+NS+EEGIHHCNASNFGLQGCV
Sbjct: 365 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVIRVNSIEEGIHHCNASNFGLQGCV 424
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FTRDINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTK+KS
Sbjct: 425 FTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKS 484
Query: 482 TVINLPTPSYTVG 494
TVINLPTPSYT+G
Sbjct: 485 TVINLPTPSYTMG 497
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141947|ref|XP_002324322.1| predicted protein [Populus trichocarpa] gi|222865756|gb|EEF02887.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/494 (91%), Positives = 473/494 (95%), Gaps = 1/494 (0%)
Query: 2 AVFEEIVDENG-VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETA 60
+VF E+VDE+ V+KF+ DG W+KS+SGK V+IINPTTRK ++VQACTQEEVNK++E A
Sbjct: 5 SVFAELVDEDTTVFKFYSDGEWKKSTSGKLVSIINPTTRKTQYKVQACTQEEVNKIIEAA 64
Query: 61 KLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVS 120
K AQKSWAKTPLWKRAELLHKAAAILKE +APIAECLVKEIAKPAKDAVTEVVRSGDLVS
Sbjct: 65 KTAQKSWAKTPLWKRAELLHKAAAILKEHRAPIAECLVKEIAKPAKDAVTEVVRSGDLVS 124
Query: 121 YCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPA 180
YCAEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPA
Sbjct: 125 YCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPA 184
Query: 181 LIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCIS 240
LIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGL+SCVTGKGSEIGDFLTMHP ++CIS
Sbjct: 185 LIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLVSCVTGKGSEIGDFLTMHPGVSCIS 244
Query: 241 FTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVK 300
FTGGDTGI+ISKKAGMIPLQMELGGKDACIILED DLDLAAANI+KGGFSYSGQRCTAVK
Sbjct: 245 FTGGDTGIAISKKAGMIPLQMELGGKDACIILEDGDLDLAAANIIKGGFSYSGQRCTAVK 304
Query: 301 VALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATF 360
V L+MESVADTLVEKVKAKVAKLTVG PEDDCDITPVVTESSANFIEGLVMDAKQK ATF
Sbjct: 305 VILIMESVADTLVEKVKAKVAKLTVGPPEDDCDITPVVTESSANFIEGLVMDAKQKGATF 364
Query: 361 CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS+EE IHH NASNFGLQGC
Sbjct: 365 CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSIEEAIHHSNASNFGLQGC 424
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
+FTRDINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTKIK
Sbjct: 425 IFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 484
Query: 481 STVINLPTPSYTVG 494
STVINLP PSY +G
Sbjct: 485 STVINLPAPSYAMG 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523177|ref|XP_004168601.1| PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/493 (90%), Positives = 470/493 (95%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
VF +I D VYK++ +G W+KSSSGKSV IINPTTRK +RVQAC QEEVNKV+E AK
Sbjct: 5 GVFADIFDGE-VYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNKVMEIAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQK WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 64 SAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
CAEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPAL
Sbjct: 124 CAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP ++CISF
Sbjct: 184 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 244 TGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKVKA+VAKLTVGAPEDD DITPVVTESSANFIEGLVMDAK+K ATFC
Sbjct: 304 VLVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV
Sbjct: 364 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+DINKAILISDAMETGTVQINSAP+RGPDHFPFQG+KDSGIGSQG+TNSINMMTK+K+
Sbjct: 424 FTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLPTPSYT+G
Sbjct: 484 TVINLPTPSYTMG 496
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442981|ref|XP_004139259.1| PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/492 (90%), Positives = 470/492 (95%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
VF +I D VYK++ +G W+KSSSGKSV IINPTTRK +RVQAC QEEVNKV+E AK
Sbjct: 6 VFADIFDGE-VYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNKVMEIAKS 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC
Sbjct: 65 AQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP ++CISFT
Sbjct: 185 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
LVMESVAD LVEKVKA+VAKLTVGAPEDD DITPVVTESSANFIEGLVMDAK+K ATFCQ
Sbjct: 305 LVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKDATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+DINKAILISDAMETGTVQINSAP+RGPDHFPFQG+KDSGIGSQG+TNSINMMTK+K+T
Sbjct: 425 TKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTT 484
Query: 483 VINLPTPSYTVG 494
VINLPTPSYT+G
Sbjct: 485 VINLPTPSYTMG 496
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357480129|ref|XP_003610350.1| NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Medicago truncatula] gi|355511405|gb|AES92547.1| NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/492 (90%), Positives = 474/492 (96%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
V EI+D + VYK++ DG W+KS+SGKSV IINPTTRKP ++VQAC+QEEVNKV+++AK
Sbjct: 6 VLAEILDGD-VYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKA 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQKSWAKTPLWKRAELLHKAAAILKE KA IAECLVKEIAKPAKDAVTEVVRSGDLVSYC
Sbjct: 65 AQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAVAALHMV+CFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNSIVLKPPTQGAVAALHMVYCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
LV+ESVADTLVEKVKAKVAKL+VG PEDDCDITPVV+ESSANFIEGLV DAKQK ATFCQ
Sbjct: 305 LVIESVADTLVEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+DINKA++ISDAME+GTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTKIK+T
Sbjct: 425 TKDINKAMMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTT 484
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 485 VINLPSPSYTMG 496
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225445885|ref|XP_002279374.1| PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Vitis vinifera] gi|297743634|emb|CBI36517.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/492 (90%), Positives = 469/492 (95%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
VF EI+D + VYK++ +G WRK+ SGKSV IINPTTRK +RVQAC+QEEVNK +E AK
Sbjct: 6 VFAEIIDGD-VYKYYSEGEWRKAVSGKSVAIINPTTRKTQYRVQACSQEEVNKAMEIAKS 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 65 AQKIWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYT 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNER+KYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERSKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAV+ALHMVHCFHLAGFPKG+ISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGVISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDL AANIVKGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
L MES+ADTLVEKV AKVAKLTVG PEDDCDITPVV+ESSANFIEGLVMDAKQK ATFCQ
Sbjct: 305 LAMESIADTLVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EY+REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV+RINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVLRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST
Sbjct: 425 TRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 484
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 485 VINLPSPSYTMG 496
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217075002|gb|ACJ85861.1| unknown [Medicago truncatula] gi|388496528|gb|AFK36330.1| unknown [Medicago truncatula] gi|388517939|gb|AFK47031.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/492 (90%), Positives = 473/492 (96%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
V EI+D + VYK++ DG W+KS+SGKSV IINPTTRKP ++VQAC+QEEVNKV+++AK
Sbjct: 6 VLAEILDGD-VYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKA 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQKSWAKTPLWKRAELLHKAAAILKE KA IAECLVKEIAKPAKDAVTEVVRSGDLVSYC
Sbjct: 65 AQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSK APALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKTAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAVAALHMV+CFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNSIVLKPPTQGAVAALHMVYCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
LV+ESVADTLVEKVKAKVAKL+VG PEDDCDITPVV+ESSANFIEGLV DAKQK ATFCQ
Sbjct: 305 LVIESVADTLVEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+DINKA++ISDAME+GTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTKIK+T
Sbjct: 425 TKDINKAMMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTT 484
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 485 VINLPSPSYTMG 496
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147821263|emb|CAN70186.1| hypothetical protein VITISV_034728 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/492 (90%), Positives = 468/492 (95%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
VF EI+D + VYK++ +G WRK+ SGKSV IINPTTRK +RVQAC+QEEVNK +E AK
Sbjct: 6 VFAEIIDGD-VYKYYSEGEWRKAVSGKSVAIINPTTRKTQYRVQACSQEEVNKAMEIAKS 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 65 AQKIWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYT 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNER+KYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERSKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAV+ALHMVHCFHLAGFPKG+ISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGVISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDL AANIVKGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
L MES+AD LVEKV AKVAKLTVG PEDDCDITPVV+ESSANFIEGLVMDAKQK ATFCQ
Sbjct: 305 LAMESIADXLVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EY+REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV+RINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVLRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST
Sbjct: 425 TRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 484
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 485 VINLPSPSYTMG 496
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2494076|sp|P93338.1|GAPN_NICPL RecName: Full=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; AltName: Full=Glyceraldehyde-3-phosphate dehydrogenase [NADP(+)]; AltName: Full=Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase; AltName: Full=Triosephosphate dehydrogenase gi|1842115|gb|AAB47571.1| non-phosphorylating glyceraldehyde dehydrogenase [Nicotiana plumbaginifolia] | Back alignment and taxonomy information |
|---|
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/493 (89%), Positives = 470/493 (95%), Gaps = 1/493 (0%)
Query: 2 AVFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK 61
VF +I+ E V+K++ +G W+KS+SGKSV IINPTTRK ++VQACTQEEVNKV+E AK
Sbjct: 5 GVFVDII-EGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVMEVAK 63
Query: 62 LAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 121
AQKSWAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 64 TAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY 123
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPAL
Sbjct: 124 TAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPAL 183
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISF 241
IAGNS+VLKPPTQGAVA LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP ++CISF
Sbjct: 184 IAGNSLVLKPPTQGAVACLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVHCISF 243
Query: 242 TGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
TGGDTG++ISKKAGMIPLQMELGGKDACI+LEDADLDLAA +IVKGGFSYSGQRCTAVKV
Sbjct: 244 TGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLAAGSIVKGGFSYSGQRCTAVKV 303
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LVMESVAD LVEKV AKVAKLTVG PEDDCDITPVV+ESSANFIEGLVMDAKQK ATFC
Sbjct: 304 VLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKNATFC 363
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
Q+YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV
Sbjct: 364 QQYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 423
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT+DINKAILISDAMETGTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTK+K+
Sbjct: 424 FTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKT 483
Query: 482 TVINLPTPSYTVG 494
TVINLPTPSYT+G
Sbjct: 484 TVINLPTPSYTMG 496
|
Source: Nicotiana plumbaginifolia Species: Nicotiana plumbaginifolia Genus: Nicotiana Family: Solanaceae Order: Solanales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356562585|ref|XP_003549550.1| PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/492 (89%), Positives = 471/492 (95%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
+F EI+D + VYK++ DG W+KS+SGKSV IINPTTRK ++VQAC+QEEVNKV++ AK
Sbjct: 7 LFAEILDGD-VYKYYADGEWKKSASGKSVAIINPTTRKTQYKVQACSQEEVNKVMDLAKS 65
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY
Sbjct: 66 AQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYT 125
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALI
Sbjct: 126 AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALI 185
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGNSIVLKPPTQGAV+ALHMVHCFHLAGFPKGLI+CVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 186 AGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTMHPGVNCISFT 245
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGMIPLQMELGGKDACI+LEDADLDL AANI+KGGFSYSGQRCTAVKV
Sbjct: 246 GGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVV 305
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
LVMES AD LVEKVKAKVAKLTVG PEDDCDITPVV+ESSANFIEGLV+DAK+K ATFCQ
Sbjct: 306 LVMESAADALVEKVKAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVLDAKEKGATFCQ 365
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 366 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 425
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+D+NKAI+ISDAMETGTVQINSAP+RGPDHFPFQG+KDSGIGSQGITNSINMMTK+K+T
Sbjct: 426 TKDVNKAIMISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTT 485
Query: 483 VINLPTPSYTVG 494
VINLP+PSYT+G
Sbjct: 486 VINLPSPSYTMG 497
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 494 | ||||||
| TIGR_CMR|BA_0849 | 479 | BA_0849 "glyceraldehyde-3-phos | 0.959 | 0.989 | 0.486 | 2.9e-119 | |
| UNIPROTKB|Q81QX6 | 474 | BAS2135 "Aldehyde dehydrogenas | 0.935 | 0.974 | 0.321 | 2.4e-60 | |
| TIGR_CMR|BA_2289 | 474 | BA_2289 "aldehyde dehydrogenas | 0.935 | 0.974 | 0.321 | 2.4e-60 | |
| TIGR_CMR|GSU_1108 | 475 | GSU_1108 "aldehyde dehydrogena | 0.947 | 0.985 | 0.292 | 6.1e-55 | |
| ASPGD|ASPL0000017286 | 488 | AN4054 [Emericella nidulans (t | 0.935 | 0.946 | 0.311 | 1.9e-51 | |
| UNIPROTKB|P47895 | 512 | ALDH1A3 "Aldehyde dehydrogenas | 0.935 | 0.902 | 0.311 | 2.4e-51 | |
| UNIPROTKB|Q1JUP4 | 481 | araE "Alpha-ketoglutaric semia | 0.927 | 0.952 | 0.295 | 4e-51 | |
| TAIR|locus:2027186 | 501 | ALDH10A8 "AT1G74920" [Arabidop | 0.898 | 0.886 | 0.335 | 2.8e-50 | |
| DICTYBASE|DDB_G0288521 | 503 | DDB_G0288521 "putative NAD-dep | 0.951 | 0.934 | 0.304 | 1.2e-49 | |
| POMBASE|SPAC922.07c | 496 | SPAC922.07c "aldehyde dehydrog | 0.927 | 0.923 | 0.298 | 1.2e-49 |
| TIGR_CMR|BA_0849 BA_0849 "glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 232/477 (48%), Positives = 316/477 (66%)
Query: 11 NGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKT 70
+ YKF+ +G WR+SSSG+++ I +P + +VQA T+ EV++ + +AK AQKSWA+
Sbjct: 4 SNTYKFYLNGEWRESSSGETIEIPSPYLHEVIGQVQAITRGEVDEAIASAKEAQKSWAEA 63
Query: 71 PLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRIL 130
L RA+ L+K A L + IA+ ++KE+ K KDA EVVR+ D + Y EE + +
Sbjct: 64 SLQDRAKYLYKWADELVNMQDEIADIIMKEVGKGYKDAKKEVVRTADFIRYTIEEALHMH 123
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
GE ++ DSFPG ++K + + PLGVVLAI PFNYPVNL+ +K+APALI GN+++ K
Sbjct: 124 GES--MMGDSFPGGTKSKLAIIQRAPLGVVLAIAPFNYPVNLSAAKLAPALIMGNAVIFK 181
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P TQGA++ + MV H AG P+GL++ TG+GS IGD+L H IN +SFTGG +TG
Sbjct: 182 PATQGAISGIKMVEALHKAGLPQGLVNVATGRGSVIGDYLVEHEGINMVSFTGGTNTGKH 241
Query: 250 ISKKAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVA 309
++KKA MIPL +ELGGK V G FSYSGQRCTA+K LV E+VA
Sbjct: 242 LAKKASMIPLVLELGGKDPGIVREDADLQDAANHIVSGAFSYSGQRCTAIKRVLVHENVA 301
Query: 310 DXXXXXXXXXXXXXXXGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN 369
D G+PE D I P++ + SA+ ++GLV DA +K AT KRE N
Sbjct: 302 DELVSLVKEQVAKLSVGSPEQDSTIVPLIDDKSADLVQGLVDDAVEKGATIVIGNKRERN 361
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
LI+P L+D+V +M++AWEEPFGP+LP+IR++S E+ I N S FGLQ VFT+DINKA
Sbjct: 362 LIYPTLIDHVTEEMKVAWEEPFGPILPIIRVSSDEQAIEIANKSEFGLQASVFTKDINKA 421
Query: 430 ILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
I++ +ETG+VQIN RGPDHFPF G+K SG+G+QGI S+ MT+ K TV+NL
Sbjct: 422 FAIANKIETGSVQINGRTERGPDHFPFIGVKGSGMGAQGIRKSLESMTREKVTVLNL 478
|
|
| UNIPROTKB|Q81QX6 BAS2135 "Aldehyde dehydrogenase family protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 152/473 (32%), Positives = 238/473 (50%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G W+ ++ K + P + + + T+E+V + V AK A K + RA
Sbjct: 6 YINGDWKSVNTYKP--LYAPYSEETLAEIAQGTEEDVKEAVAAAKNAMKEMNTLSAYDRA 63
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L K A + E++ AE + KE AKP + A EV R+ + AEE RI GE L
Sbjct: 64 TILEKVAQKMDERREEFAEIIAKEAAKPIRAARGEVDRTVQTYKFAAEEAKRIYGE--TL 121
Query: 137 VSDSFPGNE-RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
D+ PG + R Y T + P+GV+ AI PFN+P+NL K+ PA+ AGN++VLKP Q
Sbjct: 122 PLDAAPGADGRIAY--TIRKPIGVIGAITPFNFPLNLVAHKVGPAIAAGNTVVLKPADQT 179
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKA 254
+++ ++ F AG PKG ++ ++G GS +G+ + + + I+FTG GI I KA
Sbjct: 180 PLSSYALIELFEEAGLPKGALNIISGPGSTVGEAIVTNDDVASITFTGSPKVGIGIKAKA 239
Query: 255 GMIPLQMELGGKXXXXXXXXXXXXXXXXXXVK-GGFSYSGQRCTAVKVALVMESVADXXX 313
G+ + +ELG VK G F +GQ C +V+ V E D
Sbjct: 240 GLKRVTLELGSNAAVIIDEDVELTDELIERVKWGAFVNNGQVCISVQRVFVHEERRDDFL 299
Query: 314 XXXXXXXXXXXXGAPE-DDCDITPVVTESSANFIEGLVMDA-KQKAATFCQEYKREGNLI 371
G P ++ D++ ++++ I+ V +A K+ A KR+ +
Sbjct: 300 SKLRKAMETVVVGDPLIEETDVSALISKKDVERIDNWVQEAVKEGANVLYGGNKRDERVF 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P +L NV + + +E FGP++ V +E I N S +GLQ VFT ++ KA+
Sbjct: 360 EPTVLTNVPEHVSVQCQEVFGPLMTVNTFKEFDEAIEQVNNSRYGLQAGVFTNNLFKAMR 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
D +E G V IN P+ DH P+ G+K+SG G +GI +I MT++K I
Sbjct: 420 AIDELEVGGVMINDIPTFRVDHMPYGGVKESGTGREGIKYAIEEMTEMKLVCI 472
|
|
| TIGR_CMR|BA_2289 BA_2289 "aldehyde dehydrogenase family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 152/473 (32%), Positives = 238/473 (50%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G W+ ++ K + P + + + T+E+V + V AK A K + RA
Sbjct: 6 YINGDWKSVNTYKP--LYAPYSEETLAEIAQGTEEDVKEAVAAAKNAMKEMNTLSAYDRA 63
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L K A + E++ AE + KE AKP + A EV R+ + AEE RI GE L
Sbjct: 64 TILEKVAQKMDERREEFAEIIAKEAAKPIRAARGEVDRTVQTYKFAAEEAKRIYGE--TL 121
Query: 137 VSDSFPGNE-RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
D+ PG + R Y T + P+GV+ AI PFN+P+NL K+ PA+ AGN++VLKP Q
Sbjct: 122 PLDAAPGADGRIAY--TIRKPIGVIGAITPFNFPLNLVAHKVGPAIAAGNTVVLKPADQT 179
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKA 254
+++ ++ F AG PKG ++ ++G GS +G+ + + + I+FTG GI I KA
Sbjct: 180 PLSSYALIELFEEAGLPKGALNIISGPGSTVGEAIVTNDDVASITFTGSPKVGIGIKAKA 239
Query: 255 GMIPLQMELGGKXXXXXXXXXXXXXXXXXXVK-GGFSYSGQRCTAVKVALVMESVADXXX 313
G+ + +ELG VK G F +GQ C +V+ V E D
Sbjct: 240 GLKRVTLELGSNAAVIIDEDVELTDELIERVKWGAFVNNGQVCISVQRVFVHEERRDDFL 299
Query: 314 XXXXXXXXXXXXGAPE-DDCDITPVVTESSANFIEGLVMDA-KQKAATFCQEYKREGNLI 371
G P ++ D++ ++++ I+ V +A K+ A KR+ +
Sbjct: 300 SKLRKAMETVVVGDPLIEETDVSALISKKDVERIDNWVQEAVKEGANVLYGGNKRDERVF 359
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P +L NV + + +E FGP++ V +E I N S +GLQ VFT ++ KA+
Sbjct: 360 EPTVLTNVPEHVSVQCQEVFGPLMTVNTFKEFDEAIEQVNNSRYGLQAGVFTNNLFKAMR 419
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
D +E G V IN P+ DH P+ G+K+SG G +GI +I MT++K I
Sbjct: 420 AIDELEVGGVMINDIPTFRVDHMPYGGVKESGTGREGIKYAIEEMTEMKLVCI 472
|
|
| TIGR_CMR|GSU_1108 GSU_1108 "aldehyde dehydrogenase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 139/476 (29%), Positives = 228/476 (47%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK G W + ++NP V T E+V+ + A+ + P +
Sbjct: 5 YKVLVGGEWT-GDDRPGIEVVNPYDDSVIGVVPEATNEDVDHAIRAAQAGFAEMSALPAY 63
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+R+++L + + ++K + IAE + +E K K A+ E RS + + + E GE
Sbjct: 64 RRSDILDRTSELIKRDREEIAEIIAREAGKSWKFALAEADRSAETFRFASLEARNAHGE- 122
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++ D+ P + ++ + P+GV+ AI PFN+P+NL K+APA+ AGN+IVLKP T
Sbjct: 123 -IVPMDASPVSAG-RFGFYLRTPIGVIGAIAPFNFPLNLVAHKVAPAIAAGNAIVLKPAT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISK 252
+ ++++ + AG P G ++ V G G +G+ L + ++FTG G+ I +
Sbjct: 181 KTPLSSIKLAELMVEAGLPAGALNLVIGSGRTVGNRLVEDDRLAMVTFTGSPPVGVQIKE 240
Query: 253 KAGMIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXX 312
++G+ + +ELG V G F+ SGQ C +V+ V +
Sbjct: 241 RSGLKRVTLELGSNSPTIIEDDGDVDAAVARCVVGSFANSGQVCISVQRIFVHQRRYREF 300
Query: 313 XXXXXXXXXXXXXGAPED-DCDITPVVT-ESSANFIEGLVMDAKQKAATFCQEYKREGNL 370
G P D DCDI P+++ E +E L +A A GN
Sbjct: 301 VDKFVAATQKLKVGDPMDRDCDIGPMISREELQRAVEWLG-EATSLGARLETGGTVAGNC 359
Query: 371 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 430
+ P +L V PDM++ E F P++ VI + ++ + + S +GLQ V+T DINKA
Sbjct: 360 LTPAILSGVTPDMKVVCSEVFAPIVSVIPYETFDQALDMADDSIYGLQAGVYTSDINKAF 419
Query: 431 LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
++ G V IN P+ DH P+ G K SG+G +GI ++ MT IK +NL
Sbjct: 420 KAIRRLDVGGVIINDIPTFRVDHMPYGGNKQSGLGREGIRYAMEEMTNIKFVCLNL 475
|
|
| ASPGD|ASPL0000017286 AN4054 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 149/478 (31%), Positives = 214/478 (44%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
+ F +G ++ SS GK+ ++I+P T+ V T+E+ N V AK A +W
Sbjct: 19 RLFINGEFQPSSDGKTFSLIDPFTQNSVAEVSQATEEDTNNAVAAAKAAFPAWRDRSPAD 78
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R LHK AA+++E A +P V S D SY AE G + G
Sbjct: 79 RGACLHKLAALIRENNEEFARLEALSTGRPVSRYFDATV-SADTFSYFAEAGWTVQGTSS 137
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
L + PG+ +T K P GVV I P+N P+ K+APAL AGN++VLK +
Sbjct: 138 L----NTPGHLN----MTVKQPYGVVACIIPWNVPMAFFAFKVAPALAAGNTVVLKSSEK 189
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKK 253
+ + AGFP G+I+ ++G G+ G L H + C+SFTG TG I
Sbjct: 190 APLTSALAATLIAEAGFPPGVINILSGFGTPAGSTLASHMDVRCLSFTGSSFTGQRIQAA 249
Query: 254 AG---MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVAD 310
A M + MELGGK SGQ C A V ESVAD
Sbjct: 250 AAASNMKIVHMELGGKSPALIFEDADLENAAQATQFSIQCLSGQTCMANSRIYVQESVAD 309
Query: 311 XXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN 369
G P E P V ++ + +Q G
Sbjct: 310 EFLALFKEKFGSAVLGNPLESGTTHGPQVDGLQYERVKSYITIGEQDGKLSMGGDAGNGY 369
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
+ P + + V D RI EE FGPV+ + + EE I NAS FGL VFT+D+++A
Sbjct: 370 FVKPTVFEGVPEDSRIVKEEVFGPVVVINTFKTEEEAIKKANASEFGLYASVFTKDLDRA 429
Query: 430 ILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
+ S +E GTV +N+ +P+ D PF G K SG+G +G +S++ + K+ +I +
Sbjct: 430 VRTSKLLEAGTVGVNTTSPNVAKD-MPFGGYKMSGVGREGFMHSLDNFLETKTILIKM 486
|
|
| UNIPROTKB|P47895 ALDH1A3 "Aldehyde dehydrogenase family 1 member A3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 151/485 (31%), Positives = 236/485 (48%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKS--WAKTP 71
K F + W +S SGK NP+TR+ V+ + +V+K VE A++A Q+ W +
Sbjct: 33 KIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLD 92
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL--VSYCAEEGVRI 129
R LLH+ A +++ +A +A + KP A + G + + Y A +I
Sbjct: 93 ALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFF-IDLEGCIRTLRYFAGWADKI 151
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
+GK + +D C T P+GV AI P+N+P+ + V K+APAL GN++VL
Sbjct: 152 --QGKTIPTDD------NVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVL 203
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
KP Q + AL++ AGFP G+++ V G G +G ++ HP IN I+FTG + G
Sbjct: 204 KPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGK 263
Query: 249 SISKKAGMIPLQ---MELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVM 305
+ + A L+ +ELGGK +G F GQ CTA V
Sbjct: 264 LVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVE 323
Query: 306 ESVADXXXXXXXXXXXXXXXGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATF-C-- 361
E V G P D + P + + + I L+ K++ A C
Sbjct: 324 EQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGG 383
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ +G I P + V +MRIA EE FGPV P+++ S+EE I N++++GL V
Sbjct: 384 SAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAV 443
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
FT++++KA+ ++ A+E+GTV IN + PF G K SG G + ++ T++K+
Sbjct: 444 FTKNLDKALKLASALESGTVWINCYNALYAQA-PFGGFKMSGNGRELGEYALAEYTEVKT 502
Query: 482 TVINL 486
I L
Sbjct: 503 VTIKL 507
|
|
| UNIPROTKB|Q1JUP4 araE "Alpha-ketoglutaric semialdehyde dehydrogenase" [Azospirillum brasilense (taxid:192)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 140/473 (29%), Positives = 223/473 (47%)
Query: 19 DGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAEL 78
DG W ++SGK++ ++NP T KP RV ++++ + A+ ++W K P +RA
Sbjct: 14 DGEWVDAASGKTIDVVNPATGKPIGRVAHAGIADLDRALAAAQSGFEAWRKVPAHERAAT 73
Query: 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138
+ KAAA+++E+ IA+ + +E KP +A EV+ + D++ + A+EG R+ G +V
Sbjct: 74 MRKAAALVRERADAIAQLMTQEQGKPLTEARVEVLSAADIIEWFADEGRRVYGR---IVP 130
Query: 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198
G ++T K P+G V A P+N+PVN V K++ AL G S ++K P + +
Sbjct: 131 PRNLGAQQT----VVKEPVGPVAAFTPWNFPVNQVVRKLSAALATGCSFLVKAPEETPAS 186
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG-- 255
++ F AG P G+I V G +EI +L HP I ++FTG G ++ AG
Sbjct: 187 PAALLRAFVDAGVPAGVIGLVYGDPAEISSYLIPHPVIRKVTFTGSTPVGKQLASLAGLH 246
Query: 256 MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXXXXX 315
M MELGG F +GQ C + LV S+ D
Sbjct: 247 MKRATMELGGHAPVIVAEDADVALAVKAAGGAKFRNAGQVCISPTRFLVHNSIRDEFTRA 306
Query: 316 XXXXXXXXXXG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR---EGNLI 371
G E+ + + + ++ +A++ A+ +R EGN
Sbjct: 307 LVKHAEGLKVGNGLEEGTTLGALANPRRLTAMASVIDNARKVGASIETGGERIGSEGNFF 366
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P ++ NV D + EPFGPV + + +EE I N FGL G FTR L
Sbjct: 367 APTVIANVPLDADVFNNEPFGPVAAIRGFDKLEEAIAEANRLPFGLAGYAFTRSFANVHL 426
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
++ +E G + IN + P+ PF G+KDSG GS+G ++ KS +
Sbjct: 427 LTQRLEVGMLWINQPATPWPE-MPFGGVKDSGYGSEGGPEALEPYLVTKSVTV 478
|
|
| TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 158/471 (33%), Positives = 221/471 (46%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQ-----KSWAK 69
+ F DG WR+ K + I+NP T + + A T E+V+ V A+ A K WAK
Sbjct: 9 QLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAK 68
Query: 70 TPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRI 129
P RA+ L AA + E+K +A+ + KP +AV ++ D V+ C E
Sbjct: 69 APGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDEAVWDM----DDVAGCFEFYAD- 123
Query: 130 LGEG---KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
L EG K S P Y L K PLGVV I P+NYP+ +AV K+AP+L AG +
Sbjct: 124 LAEGLDAKQKAPVSLPMESFKSYVL--KQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCT 181
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
+LKP +V L + G P G+++ +TG GSE G L HP ++ I+FTG
Sbjct: 182 AILKPSELASVTCLELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFA 241
Query: 246 TGISISKKAGMI--PLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVAL 303
TG + A + P+ MELGGK + G F +GQ C+A L
Sbjct: 242 TGSKVMTAAAQLVKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLL 301
Query: 304 VMESVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
V ES+A P E+ C + PVV++ I + AK + AT
Sbjct: 302 VHESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILH 361
Query: 363 -----EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
E+ +G I P ++ +V M+I EE FGPVL V S +E I N S++GL
Sbjct: 362 GGSRPEHLEKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGL 421
Query: 418 QGCVFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIGSQ 467
V + D + IS+A E G V IN S P P+ G+K SG G +
Sbjct: 422 GAAVISNDTERCDRISEAFEAGIVWINCSQPCF--TQAPWGGVKRSGFGRE 470
|
|
| DICTYBASE|DDB_G0288521 DDB_G0288521 "putative NAD-dependent aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 148/486 (30%), Positives = 234/486 (48%)
Query: 15 KFFYDGVWRKS-SSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPL 72
K F + W S ++ ++INPT + + +++V++ VE A+ A + W+
Sbjct: 18 KIFINNEWVDSIDCNENFSLINPTNEECLGIIGLGGRKDVDRAVEAARSAIRGKWSTMAP 77
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILG 131
R LL+K A L+E++ +A + KP ++ V ++ +S + Y A +I G
Sbjct: 78 LDRGILLNKLADKLEEKREQMATIESINVGKPIGESLVYDLKQSITFLRYFAGWADKITG 137
Query: 132 EGKLLVSDSFPGNERTKYCL--TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
+ +S S + T+ L T ++PLGV I P+N+P+ L + K+APAL AGN++++
Sbjct: 138 R-TIPISSSSDTSTPTRQVLAYTKQVPLGVCALILPWNFPLQLLMFKLAPALAAGNTVII 196
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGI 248
KP ++ ++ GFP G+++ V G GS +GD ++ H IN I FTG G
Sbjct: 197 KPSEFTPLSTFYLAELIKEVGFPPGVVNVVCGLGSVVGDAMSSHMKINKIGFTGSTKVGK 256
Query: 249 SISKKAGMIPLQ---MELGGKX-XXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALV 304
+ A L+ +ELGGK G F +GQ C+A V
Sbjct: 257 MVQNSATNSNLKHCSLELGGKSPIIIFNDVEDLDLAVIHSFHGLFWNAGQCCSAASRIYV 316
Query: 305 MESVADXXXXXXXXXXXXXXXGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQE 363
+ D G P D P V + I + K++ AT
Sbjct: 317 QSGIYDQFVEKIKKQVESRVLGDPLSKDTHQGPQVNKFQFESILRYIETGKREGATLVCG 376
Query: 364 YKREGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
KR GN I P + NV M IA EE FGPV+ ++R +V+E I N S FGL G
Sbjct: 377 GKRFGNKGYYIEPTVFSNVTDVMTIAREEIFGPVMSILRFETVQEAIDRANDSEFGLVGA 436
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFT+DINK+I++SD +++G V +NS P P+ G K SG G +++ T+ K
Sbjct: 437 VFTKDINKSIIVSDQVQSGLVWVNSFNIIDPS-IPWGGFKSSGKGRDASEYCLSVWTETK 495
Query: 481 STVINL 486
+TV+++
Sbjct: 496 TTVLDV 501
|
|
| POMBASE|SPAC922.07c SPAC922.07c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 143/479 (29%), Positives = 236/479 (49%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G W KS+ ++ ++P+ + +V ++E++ V++AK A K+W K P ++
Sbjct: 24 YINGEWHKSA--ETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEKG 81
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
ELL K A + ++ +A + KP +A +V + L+ YCA +I G+
Sbjct: 82 ELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQ--- 138
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
++ G E+ Y + P+GV I P+NYP+N+A KIAPAL AGN I++K
Sbjct: 139 VIPT---GPEKLAYA--KRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETT 193
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKA 254
++ L+ AGFPKG+++ ++G G+ G ++ HP I+ I+FTG G+ + + A
Sbjct: 194 PLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLA 253
Query: 255 G--MIPLQMELGGKXXXXXXXXXXXXXXXXXXVKGGFSYSGQRCTAVKVALVMESVADXX 312
+ + +E GGK G SGQ CT+ V +SV D
Sbjct: 254 ASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKF 313
Query: 313 XXXXXXXXXXXXX-GAPEDDCDIT-PVVTESSANFIEGLVMDAKQKAATFCQEYK----R 366
G P DD + PVV ++ N I+ + K++ A + +
Sbjct: 314 IELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLK 373
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
+G I P + + +M I EE FGPV+ + + + +E I N + +GL FT+D+
Sbjct: 374 QGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDL 433
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
+A +SD +E G V INS + PF G+K SGIG++ +N I M T+IK+ IN
Sbjct: 434 ERAHRVSDELEAGMVFINSTEN-SDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHIN 491
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8LK61 | GAPN_WHEAT | 1, ., 2, ., 1, ., 9 | 0.8780 | 0.9939 | 0.9899 | N/A | no |
| P93338 | GAPN_NICPL | 1, ., 2, ., 1, ., 9 | 0.8985 | 0.9959 | 0.9919 | N/A | no |
| B7GYG4 | BETB_ACIB3 | 1, ., 2, ., 1, ., 8 | 0.3244 | 0.9412 | 0.9489 | yes | no |
| Q62CH7 | BETB_BURMA | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| Q02DY9 | BETB_PSEAB | 1, ., 2, ., 1, ., 8 | 0.3266 | 0.9514 | 0.9591 | yes | no |
| C6DKY5 | BETB_PECCP | 1, ., 2, ., 1, ., 8 | 0.3109 | 0.9352 | 0.9428 | yes | no |
| A6UVT6 | LADH_META3 | 1, ., 2, ., 1, ., 2, 2 | 0.3277 | 0.9251 | 0.9827 | yes | no |
| P47895 | AL1A3_HUMAN | 1, ., 2, ., 1, ., 5 | 0.3285 | 0.9311 | 0.8984 | yes | no |
| Q58806 | LADH_METJA | 1, ., 2, ., 1, ., 2, 2 | 0.3319 | 0.9170 | 0.9784 | yes | no |
| Q9SNX8 | GAPN_APIGR | 1, ., 2, ., 1, ., 9 | 0.8661 | 0.9959 | 0.9919 | N/A | no |
| A1UVS4 | BETB_BURMS | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| C3K3D2 | BETB_PSEFS | 1, ., 2, ., 1, ., 8 | 0.3216 | 0.9372 | 0.9448 | yes | no |
| Q6FDF8 | BETB_ACIAD | 1, ., 2, ., 1, ., 8 | 0.3162 | 0.9412 | 0.9489 | yes | no |
| Q63KK8 | BETB_BURPS | 1, ., 2, ., 1, ., 8 | 0.3196 | 0.9412 | 0.9509 | yes | no |
| B1JSQ9 | BETB_YERPY | 1, ., 2, ., 1, ., 8 | 0.3002 | 0.9331 | 0.9408 | yes | no |
| B0VST2 | BETB_ACIBS | 1, ., 2, ., 1, ., 8 | 0.3223 | 0.9412 | 0.9489 | yes | no |
| B7I896 | BETB_ACIB5 | 1, ., 2, ., 1, ., 8 | 0.3244 | 0.9412 | 0.9489 | yes | no |
| B0V944 | BETB_ACIBY | 1, ., 2, ., 1, ., 8 | 0.3244 | 0.9412 | 0.9489 | yes | no |
| B2HV80 | BETB_ACIBC | 1, ., 2, ., 1, ., 8 | 0.3223 | 0.9412 | 0.9489 | yes | no |
| P81406 | GAPN_PEA | 1, ., 2, ., 1, ., 9 | 0.8945 | 0.9959 | 0.9919 | N/A | no |
| A4FW36 | LADH_METM5 | 1, ., 2, ., 1, ., 2, 2 | 0.3382 | 0.9251 | 0.9827 | yes | no |
| A3MEC6 | BETB_BURM7 | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| P42236 | ALDH1_BACSU | 1, ., 2, ., 1, ., 3 | 0.3247 | 0.9089 | 0.9200 | yes | no |
| Q6LX65 | LADH_METMP | 1, ., 2, ., 1, ., 2, 2 | 0.3277 | 0.9251 | 0.9827 | yes | no |
| A4XPI6 | BETB_PSEMY | 1, ., 2, ., 1, ., 8 | 0.3298 | 0.9372 | 0.9448 | yes | no |
| B7V5R4 | BETB_PSEA8 | 1, ., 2, ., 1, ., 8 | 0.3306 | 0.9514 | 0.9591 | yes | no |
| B1Z033 | BETB_BURA4 | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| Q3C1A6 | GAPN_STREI | 1, ., 2, ., 1, ., 9 | 0.5232 | 0.9493 | 0.9852 | N/A | no |
| Q1WIQ6 | GAPN_ARATH | 1, ., 2, ., 1, ., 9 | 0.8681 | 0.9959 | 0.9919 | yes | no |
| A6UQD0 | LADH_METVS | 1, ., 2, ., 1, ., 2, 2 | 0.3277 | 0.9251 | 0.9827 | yes | no |
| Q3JLL8 | BETB_BURP1 | 1, ., 2, ., 1, ., 8 | 0.3196 | 0.9412 | 0.9509 | yes | no |
| Q43272 | GAPN_MAIZE | 1, ., 2, ., 1, ., 9 | 0.8678 | 0.9939 | 0.9859 | N/A | no |
| Q9URW9 | YLX7_SCHPO | 1, ., 2, ., 1, ., - | 0.3215 | 0.9291 | 0.9254 | yes | no |
| A3P6B0 | BETB_BURP0 | 1, ., 2, ., 1, ., 8 | 0.3196 | 0.9412 | 0.9509 | yes | no |
| A3NKP8 | BETB_BURP6 | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| A2RWD6 | BETB_BURM9 | 1, ., 2, ., 1, ., 8 | 0.3176 | 0.9412 | 0.9509 | yes | no |
| A6VH72 | LADH_METM7 | 1, ., 2, ., 1, ., 2, 2 | 0.3361 | 0.9251 | 0.9827 | yes | no |
| Q59931 | GAPN_STRMU | 1, ., 2, ., 1, ., 9 | 0.5178 | 0.9473 | 0.9852 | yes | no |
| A6VEI4 | BETB_PSEA7 | 1, ., 2, ., 1, ., 8 | 0.3306 | 0.9514 | 0.9591 | yes | no |
| Q0B712 | BETB_BURCM | 1, ., 2, ., 1, ., 8 | 0.3155 | 0.9412 | 0.9509 | yes | no |
| Q9HTJ1 | BETB_PSEAE | 1, ., 2, ., 1, ., 8 | 0.3306 | 0.9514 | 0.9591 | yes | no |
| A3M365 | BETB_ACIBT | 1, ., 2, ., 1, ., 8 | 0.3223 | 0.9412 | 0.9489 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 494 | |||
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 0.0 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-173 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-149 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-138 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-136 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-126 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-119 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-119 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-118 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-117 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-116 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-115 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-115 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-111 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-111 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-107 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-103 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-102 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-102 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-100 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 7e-96 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 4e-95 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-94 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 3e-93 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 4e-93 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 5e-93 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 4e-92 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 7e-92 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-90 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 3e-90 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 3e-90 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 5e-90 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 7e-90 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 9e-88 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 4e-87 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 9e-87 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-86 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-84 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 5e-83 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 9e-82 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 2e-81 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-81 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-80 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 2e-80 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 2e-80 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 4e-80 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-79 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 4e-79 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 6e-79 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 6e-79 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 8e-79 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-78 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-78 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 2e-75 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-75 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 9e-75 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-74 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 4e-74 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 6e-73 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 2e-72 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 2e-72 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 5e-72 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-71 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 8e-71 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-68 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-68 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 7e-65 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 2e-63 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 5e-63 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 8e-63 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-62 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 4e-62 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-60 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-60 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-59 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 8e-59 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-58 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-58 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-57 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-57 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-50 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-50 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-48 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-46 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 3e-46 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-45 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-45 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-45 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 7e-45 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-43 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 5e-41 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 5e-40 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 7e-40 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 8e-40 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-39 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 9e-39 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-37 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 5e-37 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-35 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 9e-29 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 4e-28 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 8e-27 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 4e-26 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 9e-22 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 7e-20 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-19 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-18 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 2e-17 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-17 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 7e-16 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 7e-15 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 9e-15 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-13 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-09 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-09 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 2e-08 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 2e-06 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 4e-06 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 1e-04 | |
| pfam05893 | 400 | pfam05893, LuxC, Acyl-CoA reductase (LuxC) | 4e-04 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 1058 bits (2739), Expect = 0.0
Identities = 444/492 (90%), Positives = 468/492 (95%), Gaps = 1/492 (0%)
Query: 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKL 62
F EI+D + VYK++ DG WR SSSGKSV I NP+TRK ++VQACTQEEVNK +E+AK
Sbjct: 6 FFAEILDGD-VYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKA 64
Query: 63 AQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYC 122
AQK+WAKTPLWKRAELLHKAAAILKE KAPIAECLVKEIAKPAKDAVTEVVRSGDL+SY
Sbjct: 65 AQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYT 124
Query: 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 182
AEEGVRILGEGK LVSDSFPGNER KYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI
Sbjct: 125 AEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALI 184
Query: 183 AGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242
AGN++VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP +NCISFT
Sbjct: 185 AGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFT 244
Query: 243 GGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
GGDTGI+ISKKAGM+PLQMELGGKDACI+LEDADLDLAAANI+KGGFSYSGQRCTAVKV
Sbjct: 245 GGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVV 304
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
LVMESVAD LVEKV AKVAKLTVG PEDDCDITPVV+ESSANFIEGLVMDAK+K ATFCQ
Sbjct: 305 LVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQ 364
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
E+KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF
Sbjct: 365 EWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDINKAILISDAMETGTVQINSAP+RGPDHFPFQGLKDSGIGSQGITNSINMMTK+KST
Sbjct: 425 TRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKST 484
Query: 483 VINLPTPSYTVG 494
VINLP PSYT+G
Sbjct: 485 VINLPKPSYTMG 496
|
Length = 496 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 711 bits (1837), Expect = 0.0
Identities = 249/477 (52%), Positives = 317/477 (66%), Gaps = 8/477 (1%)
Query: 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKT-P 71
+K+ +G W++SS GK++ + +P + V A + E+ + ETA A + W T P
Sbjct: 1 QFKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMP 59
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131
L +R + LHK A +LKE K +A L+ EI K KDA+ EV R+ D + EE R+
Sbjct: 60 LEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRL-- 117
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
+G L D FPG + K + PLGVVLAI PFNYP+NL VSK+ PALI GN++V KP
Sbjct: 118 DGDSLPGDWFPGT-KGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKP 176
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISI 250
TQG + + + FH AGFPKG+++ VTG+G EIGD L H I+ ISFTG G +
Sbjct: 177 ATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRL 236
Query: 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
K+ M L +ELGGKD I+L DADL+LAA IVKG SYSGQRCTA+K LV ESVAD
Sbjct: 237 KKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVAD 296
Query: 311 TLVEKVKAKVAKLTVGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE-G 368
LVE +K +VAKL VG P D+ DITP++ SA+F+EGL+ DA K AT RE G
Sbjct: 297 ELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGG 356
Query: 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428
NLI+P LLD V PDMR+AWEEPFGPVLP+IR+N +EE I N SN+GLQ +FT+DINK
Sbjct: 357 NLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINK 416
Query: 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
A ++DA+E GTV INS RGPDHFPF G KDSGIG+QGI +++ MT+ K VIN
Sbjct: 417 ARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 494 bits (1275), Expect = e-173
Identities = 182/467 (38%), Positives = 258/467 (55%), Gaps = 16/467 (3%)
Query: 22 WRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHK 81
W SSS + +INP T + V A T E+V+ V A+ A K+WAKTP +RA +L K
Sbjct: 1 WVDSSSET-IEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 82 AAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSF 141
AA +L+E++ +AE E KP +A EV R+ D + Y A ++ GE +
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGE-------TL 112
Query: 142 PGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALH 201
P + T + PLGVV AI P+N+P+ LA KIAPAL AGN++VLKP + AL
Sbjct: 113 PSDPGVL-AYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALL 171
Query: 202 MVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIP 258
+ F AG P G+++ VTG GSE+GD L HP ++ +SFTG + G I+K A +
Sbjct: 172 LAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKR 231
Query: 259 LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318
+ +ELGGK+ I+ +DADLD A V G F +GQ CTA LV ES+ D VE++
Sbjct: 232 VTLELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVE 291
Query: 319 KVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLIWPL 374
L VG P D D DI P++++ + + DAK++ A + +G + P
Sbjct: 292 AAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPT 351
Query: 375 LLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434
+L +V PDMRIA EE FGPVL VI +E I N + +GL VFT D+ +A+ ++
Sbjct: 352 VLADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVAR 411
Query: 435 AMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481
+E G V IN + P+ PF G K SG G +G + T+ K+
Sbjct: 412 RLEAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKT 458
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-149
Identities = 184/482 (38%), Positives = 266/482 (55%), Gaps = 16/482 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK DG W +S ++ +INP T + V A T E+V+ V A+ A ++W++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAE 58
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA +L + A +L+ + +A + E KP +A E+ R+ D + Y AEE R+ GE
Sbjct: 59 ERAAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGET 118
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
S L + PLGVV AI P+N+P+ LA K+APAL AGN++VLKP
Sbjct: 119 IPTDKGSK--------ALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSE 170
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
Q ++AL + AG P G+++ VTG G+E+GD L HP ++ ISFTG G +I+
Sbjct: 171 QTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAA 230
Query: 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
A + P+ +ELGGK I+LEDADLD A V G F +GQRCTA +V ESV D
Sbjct: 231 AAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYD 290
Query: 311 TLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQK-AATFCQEYKREG 368
VE++ A+ A L VG P + D+ P+++E + +EG + DA + A + G
Sbjct: 291 EFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGG 350
Query: 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428
+ P +L+ V PDMRIA EE FGPVLPVIR EE I N + +GL +FTRD+ +
Sbjct: 351 YFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLAR 410
Query: 429 AILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487
A ++ +E G V IN + PF G+K SG+G +G + T++K+ I L
Sbjct: 411 AFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470
Query: 488 TP 489
Sbjct: 471 PA 472
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 403 bits (1039), Expect = e-138
Identities = 168/439 (38%), Positives = 238/439 (54%), Gaps = 15/439 (3%)
Query: 54 NKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVV 113
+ V A+ A K+WA P +RA +L K A +L+E++ +A E KP ++A+ EV
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVA 60
Query: 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173
R+ D Y A R+ GE V S E + + PLGVV AI P+N+P+ LA
Sbjct: 61 RAADTFRYYAGLARRLHGE----VIPSPDPGELA---IVRREPLGVVGAITPWNFPLLLA 113
Query: 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMH 233
K+APAL AGN++VLKP + AL + AG P G+++ VTG G E+G L H
Sbjct: 114 AWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASH 173
Query: 234 PSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290
P ++ ISFTG G +I + A + + +ELGGK I+ +DADLD A V G F
Sbjct: 174 PRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG 233
Query: 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGL 349
+GQ CTA LV ES+ D VE++ +V L VG P + D D+ P+++ + + +
Sbjct: 234 NAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAY 293
Query: 350 VMDAKQKAATFCQEYKRE----GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405
+ DAK + A KR G + P +L +V PDM IA EE FGPVLPVI EE
Sbjct: 294 IEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEE 353
Query: 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
I N + +GL VFTRD+ +A+ +++ +E GTV IN PF G+K SGIG
Sbjct: 354 AIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG 413
Query: 466 SQGITNSINMMTKIKSTVI 484
+G + T+ K+ I
Sbjct: 414 REGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 401 bits (1033), Expect = e-136
Identities = 172/456 (37%), Positives = 261/456 (57%), Gaps = 7/456 (1%)
Query: 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91
+I+P + RV ++E+V K + AK K P ++RAE+L +AA +L+E++
Sbjct: 2 EVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERRE 61
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE-RTKYC 150
A + E KP KDA EV R+ + + AEE R+ GE + D+ PG E R +
Sbjct: 62 EFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGE--TIPFDASPGGEGRIGF- 118
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
T + P+GVV AI PFN+P+NL K+ PA+ AGN++VLKP +Q ++AL + AG
Sbjct: 119 -TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDAC 269
PKG ++ VTG G +GD L P + ISFTG G +I++KAG+ + +ELG A
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLKKVTLELGSNAAV 237
Query: 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328
I+ DADL+ A V G F+ +GQ C +V+ V E + D +E+ A KL VG P
Sbjct: 238 IVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPL 297
Query: 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWE 388
++D D+ P+++E+ A IE V +A + A KR+G ++ P +L +V PDM++ E
Sbjct: 298 DEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCE 357
Query: 389 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448
E F PV+ + ++++E I N S +GLQ VFT D+ KA+ + +E G V IN + +
Sbjct: 358 EVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSST 417
Query: 449 RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
DH P+ G+K+SG G +G +I MT+IK
Sbjct: 418 FRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 374 bits (963), Expect = e-126
Identities = 178/459 (38%), Positives = 268/459 (58%), Gaps = 8/459 (1%)
Query: 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90
+ + NP + V + ++EEV + +E A+ A+ + P +KR ++L K A +++ +K
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
+A+ L E+ KP K + EV R+ L AEE ++L G+ + D++ NER +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEE-AKVL-RGETIPVDAYEYNER-RIA 117
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
T + P+GVV AI PFN+P NL KIAPA+ GNS+V+KP + + A+ + AG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKD 267
P G+I+ VTG GSE+GD + +P +N ISFTG G+ I+ KAG + +ELGG D
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSD 237
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+L+DADL+ A + V+G F +GQ C AVK LV E V D ++ + KV KL VG
Sbjct: 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGD 297
Query: 328 PED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-EGNLIWPLLLDNVRPDMRI 385
P D D+ P+++ + +E LV DA +K KR EG+ P +L+N PDM +
Sbjct: 298 PLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIV 357
Query: 386 AWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445
EE FGPVLP+ ++ EE + N++ +GLQ VFT DIN+A+ ++ +E G V IN
Sbjct: 358 MKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVIND 417
Query: 446 APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
+ D+ PF G K SGIG +G+ ++ MT+ K+ VI
Sbjct: 418 STRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 358 bits (920), Expect = e-119
Identities = 165/457 (36%), Positives = 250/457 (54%), Gaps = 16/457 (3%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G + SSSG+++ ++NP T + V A T E+ ++ V+ A+ AQK+W + P +RA
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
L K A +++E +A+ +V+E K A EV + D + Y AE RI EG+++
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRI--EGEII 118
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
SD NE K+P+GVV I P+N+P L K+APAL+ GN+IV+KP +
Sbjct: 119 PSDR--PNENI---FIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETP 173
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
+ AL AG P G+++ VTG+GS +GD L HP + IS TG + G I + A
Sbjct: 174 LNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233
Query: 256 --MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ + +ELGGK I+++DADLDLA IV GQ CT + V E + D +
Sbjct: 234 ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFM 293
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR----EG 368
EK+ K+ + VG P + D+ P+V E++ + +E +V A + AT KR +G
Sbjct: 294 EKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKG 353
Query: 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428
P +L NVR DM I EE FGPVLPV++ +S++E I N S +GL ++T ++N
Sbjct: 354 YFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNT 413
Query: 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
A+ ++ +E G IN F G K SG+G
Sbjct: 414 AMRATNELEFGETYINRENFEAMQGF-HAGWKKSGLG 449
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-119
Identities = 172/456 (37%), Positives = 244/456 (53%), Gaps = 6/456 (1%)
Query: 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90
+ + NP T + RV +++ + + A A + P +RA +L A L+E+
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
+AE +V E KP KDA EV R+ D AEE RI GE +L D E +
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGE--VLPLDISARGE-GRQG 117
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
L + P+G V AI PFN+P+NL K+APA+ AG VLKP ++ ++AL + G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAGMIPLQMELGGKDAC 269
PKG S + + D L I +SFTG G + +AG + +ELGG A
Sbjct: 178 LPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKKKVVLELGGNAAV 236
Query: 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPE 329
I+ DADLD AA I+ G F +GQ C +V+ LV SV D ++ A+V L G P+
Sbjct: 237 IVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPK 296
Query: 330 DD-CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWE 388
DD D+ P+++ES A +EG V +A A KR+G L+ P +L++V PDM + E
Sbjct: 297 DDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCE 356
Query: 389 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448
E FGPV+ V + +E + N S FGLQ VFTRD+ KA+ D +E G V IN P+
Sbjct: 357 EVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPT 416
Query: 449 RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
DH P+ G+KDSGIG +G+ +I MT+ + VI
Sbjct: 417 FRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 353 bits (909), Expect = e-118
Identities = 173/431 (40%), Positives = 235/431 (54%), Gaps = 12/431 (2%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111
+V++ A AQK+WA TP +RA +L KAA IL+E++ IA+ L++E A E
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171
V + ++ A R EG++L SD PG E ++PLGVV I PFN+P+
Sbjct: 61 VGAAIAILREAAGLPRRP--EGEILPSD-VPGKESMVR----RVPLGVVGVISPFNFPLI 113
Query: 172 LAVSKIAPALIAGNSIVLKPPTQGAVA-ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 230
LA+ +APAL GN++VLKP ++ V L + F AG PKG+++ V G GSEIGD L
Sbjct: 114 LAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDAL 173
Query: 231 TMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKG 287
HP + ISFTG G I + AG + + +ELGG + I+L+DADLDLA + G
Sbjct: 174 VEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFG 233
Query: 288 GFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346
F + GQ C A LV ESV D VEK+ AK L VG P + D I P++ E + +
Sbjct: 234 AFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRV 293
Query: 347 EGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEG 406
+V DA A EG P +L +V PDM I EE FGPV PVI + EE
Sbjct: 294 HAIVEDAVAAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 407 IHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGS 466
+ N + +GL VFTRD+ +A+ ++ +ETG V IN H PF G+K SG G
Sbjct: 354 VELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGR 413
Query: 467 QGITNSINMMT 477
G S+ T
Sbjct: 414 FGGPASLEEFT 424
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 351 bits (902), Expect = e-117
Identities = 160/456 (35%), Positives = 259/456 (56%), Gaps = 5/456 (1%)
Query: 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90
+ + NP + +V A + + + + TA+ ++ P +R +L +AA +LK++
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
A+ + E KP KDA EV R+ D + AEE RI GE + D+ G++ +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGE--EIPLDATQGSD-NRLA 117
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
T + P+GVVLAI PFN+P+NL K+APA+ G +VLKP ++ ++AL + AG
Sbjct: 118 WTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAG 177
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDAC 269
P+G++ VTG+ +GD + +SFTG G ++ AG + +ELGG
Sbjct: 178 VPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGKRIALELGGNAPV 237
Query: 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328
I+ DADLD A + KGGF ++GQ C +V+ V E + D +E A V KL VG P
Sbjct: 238 IVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPL 297
Query: 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWE 388
++D D+ P+++E +A +E V +A + A +R+G L P +L++V D +++ E
Sbjct: 298 DEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTE 357
Query: 389 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448
E FGPV+P+IR + EE I N++++GLQ +FTRD+N A ++ +E G V +N + +
Sbjct: 358 ETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSA 417
Query: 449 RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
D PF G+K+SG+G +G+ ++ MT+ K+ VI
Sbjct: 418 FRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 348 bits (896), Expect = e-116
Identities = 156/447 (34%), Positives = 229/447 (51%), Gaps = 23/447 (5%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+INP T + V + + ++ A A K+W KT +RA +L + A +++E+
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLT 152
+A L E KP +A EV + + + AEE RI G + P K L
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYG-------RTIPSPAPGKRILV 113
Query: 153 SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFP 212
K P+GVV AI P+N+P + KIAPAL AG ++VLKP + ++AL + AG P
Sbjct: 114 IKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLP 173
Query: 213 KGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269
G+++ VTG +EIG+ L P + ISFTG G + +A + + +ELGG
Sbjct: 174 AGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPF 233
Query: 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328
I+ +DADLD A + F +GQ C V ES+ D VEK+ +V KL VG
Sbjct: 234 IVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGL 293
Query: 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR---EGNLIWPLLLDNVRPDMRI 385
++ D+ P++ E + +E LV DA K A KR G P +L +V DM I
Sbjct: 294 DEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLI 353
Query: 386 AWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN- 444
EE FGPV P+I ++ +E I N + +GL VFTRD+ +A +++A+E G V IN
Sbjct: 354 MNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINT 413
Query: 445 ---SAPSRGPDHFPFQGLKDSGIGSQG 468
S PF G+K+SG+G +G
Sbjct: 414 GLISDA-----EAPFGGVKESGLGREG 435
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 347 bits (892), Expect = e-115
Identities = 170/456 (37%), Positives = 258/456 (56%), Gaps = 9/456 (1%)
Query: 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91
+ NP T + V A T+E + + + A + +S ++R+ +L+KAAA+L+ ++
Sbjct: 2 EVRNPYTGEVVGTVPAGTEEALREALALA-ASYRS--TLTRYQRSAILNKAAALLEARRE 58
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCL 151
A + E KD EV R+ D++ + A E +R GE + G R +
Sbjct: 59 EFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGE-SFSCDLTANGKARKIF-- 115
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211
T + PLGVVLAI PFN+P+N KIAPA+ A N IVLKP + ++A+++ + AG
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACI 270
P ++S VTG+ EIGD L HP ++ ++FTGG G +I+ AG +ELGG D I
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQLLELGGNDPLI 235
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329
+++DADL+ AA V G ++ SGQRCTAVK LV ESVAD V+ + K A L VG P +
Sbjct: 236 VMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMD 295
Query: 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEE 389
D+ V+ E +A IE V +A + A +R+G L P +LD+V PD + EE
Sbjct: 296 PATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEE 355
Query: 390 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR 449
FGPV PVIR+ ++E I N++ +GL V T D++ + + ++ GTV +N P
Sbjct: 356 TFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGF 415
Query: 450 GPDHFPFQGLKDSGIGS-QGITNSINMMTKIKSTVI 484
+ PF G+KDSG+G +G+ ++ MT +K+ +
Sbjct: 416 RSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 347 bits (893), Expect = e-115
Identities = 164/468 (35%), Positives = 235/468 (50%), Gaps = 23/468 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y+ + DG W G+ NP+ T + + E+ + + A A +W +T
Sbjct: 1 YRNYIDGEWVAGGDGEEN--RNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSP 58
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
RA++L KA L+ +K +A L +E K +A EV R+G + Y A E +R+ GE
Sbjct: 59 EARADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ + PG E T++ PLGVV I P+N+P+ + KIAPAL GN++V KP
Sbjct: 119 ---TLPSTRPGVE----VETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPA 171
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISIS 251
+A +V AG P G+ + V G GSE+G L HP ++ +SFTG G I+
Sbjct: 172 ELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIA 231
Query: 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
A +Q+E+GGK+ ++L+DADLDLA V+G F +GQRCTA +V E +
Sbjct: 232 AAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH 291
Query: 310 DTLVEKVKAKVAKLTVG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFC---QEYK 365
D VE + + L VG A ++ DI PVV+E + A+ + A + K
Sbjct: 292 DRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLK 351
Query: 366 R--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
R EG + P L V DMRIA EE FGPV VIR+ +E + N + FGL + T
Sbjct: 352 RPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVT 411
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGS--QG 468
+ A +E G V +N P+ G D H PF G K S G QG
Sbjct: 412 TSLKHATHFKRRVEAGVVMVN-LPTAGVDYHVPFGGRKGSSYGPREQG 458
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-111
Identities = 162/450 (36%), Positives = 234/450 (52%), Gaps = 11/450 (2%)
Query: 35 NPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94
NP + RV ++++ + + A A +WA T +R +L KAA I++ + +
Sbjct: 5 NPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLI 64
Query: 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSK 154
+ L+ E A E + +L+ A E R+ GE L SD PG ++ +
Sbjct: 65 DLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGE--TLPSD-SPG----TVSMSVR 117
Query: 155 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKG 214
PLGVV I PFNYP+ LA K+A AL AGN++VLKP + V L + AG PKG
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 215 LISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACII 271
+ + VTG G+E+GD L P + ++FTG G I++KAG + + +ELGGK+ I+
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIV 237
Query: 272 LEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED- 330
L DADLD A G F + GQ C + +V E V D V+K A+ +KL VG P D
Sbjct: 238 LADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDP 297
Query: 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEP 390
D I P+++ I+ V DA K A K +GN P +L +V PDMRI EE
Sbjct: 298 DTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREET 357
Query: 391 FGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG 450
FGPV VI EE + N + +GL + T D+ +A +++ +E+G V IN
Sbjct: 358 FGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILD 417
Query: 451 PDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
H PF G+K SG G +G S+ T++K
Sbjct: 418 EAHVPFGGVKASGFGREGGEWSMEEFTELK 447
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-111
Identities = 151/430 (35%), Positives = 208/430 (48%), Gaps = 66/430 (15%)
Query: 58 ETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGD 117
A+ A K+WA P +RA +L K A +L+E++ +A E KP ++A+ EV R+ D
Sbjct: 1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAID 60
Query: 118 LVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 177
Y A ++ G PG E + PLGVV I P+N+P+ LA K+
Sbjct: 61 TFRYAAGLADKLGGPELPS---PDPGGE----AYVRREPLGVVGVITPWNFPLLLAAWKL 113
Query: 178 APALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSIN 237
APAL AGN++VLKP + AL + AG P G+++ V G G E+G L HP ++
Sbjct: 114 APALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVD 173
Query: 238 CISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQ 294
ISFTG G +I K A + P+ +ELGGK I+ EDADLD A V G F +GQ
Sbjct: 174 KISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQ 233
Query: 295 RCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAK 354
CTA LV ES+ D + K+ +
Sbjct: 234 ICTAASRLLVHESIYD----EFVEKLVTV------------------------------- 258
Query: 355 QKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN 414
L +V PDM IA EE FGPVLPVIR EE I N +
Sbjct: 259 ---------------------LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTE 297
Query: 415 FGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSIN 474
+GL VFTRD+N+A+ +++ + GTV IN + PF G+K+SGIG +G +
Sbjct: 298 YGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLE 357
Query: 475 MMTKIKSTVI 484
T+ K+ VI
Sbjct: 358 EYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 327 bits (840), Expect = e-107
Identities = 151/442 (34%), Positives = 219/442 (49%), Gaps = 24/442 (5%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+INP T + ++ ++++ V AK A W+ TPL +R L A ++
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLT 152
+A L E KP +A EV + + Y A + + E ++ D +
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRYTAS--LDLPDE---VIEDDDTRRVELRR--- 112
Query: 153 SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-- 210
PLGVV AI P+N+P+ LA KIAPAL+AGN++VLKP + L + LA
Sbjct: 113 --KPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLG---ELAQEV 167
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKD 267
P G+++ V+G G E+G LT HP I ISFTG TG + A + + +ELGG D
Sbjct: 168 LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGND 226
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG- 326
A I+L D D+D A + G F SGQ C A+K V ES+ D E + A VG
Sbjct: 227 AAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGD 286
Query: 327 APEDDCDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLIWPLLLDNVRPDM 383
+ + PV + + ++ LV DAK K A + G I P ++D+
Sbjct: 287 GLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGS 346
Query: 384 RIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQI 443
RI EE FGPVLPV++ + +E I N S +GL V++ D+ +A ++ +E GTV I
Sbjct: 347 RIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWI 406
Query: 444 NSAPSRGPDHFPFQGLKDSGIG 465
N+ + P PF G K SGIG
Sbjct: 407 NTHGALDP-DAPFGGHKQSGIG 427
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-103
Identities = 162/483 (33%), Positives = 257/483 (53%), Gaps = 22/483 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
+ G W S+SG++ NP + T +V+ VE A+ A W K P +R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
AE L +AA +LK++K +A + +E+ KP + +V + D+ Y A EG R+ GE
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGE--- 118
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
+ P K +T + P+GVV I P+N+PV + KI PAL+ GN++V KP
Sbjct: 119 ----TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDT 174
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA 254
AL +V F AG P G+++ V G+G E+G+ L HP ++ +SFTG + G I +
Sbjct: 175 PACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234
Query: 255 G--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
+ +E+GGK+ I+++DADLDLA + F +GQRCTA +V ESV D
Sbjct: 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEF 294
Query: 313 VEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR----- 366
+++ + +L VG D + D+ P++ E+ + K++ AT +R
Sbjct: 295 LKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGG 354
Query: 367 --EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
+G + P + +V PDMRIA EE FGPV+ +I ++S+EE I N + +GL ++T
Sbjct: 355 YEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTE 414
Query: 425 DINKAILISDAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGS-QGITNSINMMTKIKST 482
D+NKA +E G +N AP+ G + H PF G+K SG G + T +++ T+ K+
Sbjct: 415 DVNKAFRARRDLEAGITYVN-APTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
Query: 483 VIN 485
++
Sbjct: 474 YVD 476
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-102
Identities = 164/465 (35%), Positives = 243/465 (52%), Gaps = 21/465 (4%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPLWKRAELLHKAAAILKEQK 90
INP T +P RV + +V++ V A+ A +W K +R +LL + A +++
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
+AE ++ K ++ +V + Y A G+ EG ++ P ++
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYA--GLADKIEGAVI-----PVDKGDYLN 113
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
T + PLGVV AI P+N P+ L K+APAL AGN++VLKP + L + AG
Sbjct: 114 FTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAG 173
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKD 267
FP G+++ VTG G E G+ L HP + I+FTGG TG I++ A + P+ +ELGGK
Sbjct: 174 FPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKS 233
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+ +DADLD A +V G F+ +GQ C A LV S+ D VE++ A+ + VG
Sbjct: 234 PNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGD 293
Query: 328 PED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-------EGNLIWPLLLDNV 379
P D + + P+ TE +E V A+++ A +R G P +L +V
Sbjct: 294 PLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADV 353
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439
DMRIA EE FGPVL VI + EE I N S +GL ++TRD+ +A ++ A+E G
Sbjct: 354 TNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAG 413
Query: 440 TVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
TV +N+ + P PF G KDSGIG + +I T+ KS I
Sbjct: 414 TVWVNTYRALSP-SSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-102
Identities = 167/451 (37%), Positives = 248/451 (54%), Gaps = 12/451 (2%)
Query: 20 GVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELL 79
G WR +S +++ ++NP T + + A ++E+V++ A AQK WA T +RAE+L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 80 HKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSD 139
KAA IL+E++ I E L++E A E + + A +R+ EG++L SD
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRM--EGRILPSD 118
Query: 140 SFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAV-A 198
PG E Y + PLGVV I P+N+P++L++ +APAL GN++VLKP + +
Sbjct: 119 V-PGKENRVY----REPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITG 173
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG-- 255
L + F AG PKG+++ V G GSEIGD HP ISFTG G I + AG
Sbjct: 174 GLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRH 233
Query: 256 MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEK 315
+ + +ELGG + ++LEDAD+D A V G F + GQ C A+ +V E V D VEK
Sbjct: 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEK 293
Query: 316 VKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPL 374
+V L G P D D + P++ ES + + + A ++ AT + EGN++ P
Sbjct: 294 FVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPT 353
Query: 375 LLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434
+L +V DM IA EE FGPV P+I+ + EE + N + +GL G VFT D+ + + +
Sbjct: 354 VLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFAR 413
Query: 435 AMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
++ G IN P H PF G K+SG+G
Sbjct: 414 RIDAGMTHINDQPVNDEPHVPFGGEKNSGLG 444
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = e-100
Identities = 150/444 (33%), Positives = 224/444 (50%), Gaps = 31/444 (6%)
Query: 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK 103
VQ T+EE V+ A+ A +W +TP +RA LL +AAA+L+ ++ +A +V E+ K
Sbjct: 62 TVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGK 121
Query: 104 PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAI 163
+A +V + D + Y A E +R+ G PG E +Y PLGV I
Sbjct: 122 NWAEADADVAEAIDFLEYYAREMLRLRGFPVE----MVPG-EDNRYVY---RPLGVGAVI 173
Query: 164 PPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKG 223
P+N+P+ + AL+ GN++VLKP V A +V AG P G+++ + G G
Sbjct: 174 SPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPG 233
Query: 224 SEIGDFLTMHPSINCISFTGG-DTGISISKKAGMI-PLQ-------MELGGKDACIILED 274
E+GD+L HP + I+FTG + G+ I ++A + P Q E+GGK+A I+ ED
Sbjct: 234 EEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDED 293
Query: 275 ADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCD 333
ADLD AA IV+ F + GQ+C+A +V ESV D +E++ + L VG PED +
Sbjct: 294 ADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVY 353
Query: 334 ITPVVTESSANFIEGLVMDAKQKAATFCQ----EYKREGNLIWPLLLDNVRPDMRIAWEE 389
+ PV+ + + + I + K + E EG + P + +V PD R+A EE
Sbjct: 354 MGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEE 413
Query: 390 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR 449
FGPVL VI+ +E + N + +GL G VF+R E G + N R
Sbjct: 414 IFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYAN----R 469
Query: 450 G-----PDHFPFQGLKDSGIGSQG 468
PF G K SG GS+
Sbjct: 470 KITGALVGRQPFGGFKMSGTGSKA 493
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 296 bits (761), Expect = 7e-96
Identities = 145/443 (32%), Positives = 214/443 (48%), Gaps = 19/443 (4%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
I+P + E V +E A+ AQK W PL +R ++ +A +L I
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
AE L ++ +P A E+ + Y L + ++ D F +Y
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGF-----ERY--IR 113
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
+ PLGVVL I P+NYP AV+ + PAL+AGN+++LK Q + F AG P+
Sbjct: 114 REPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPE 173
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACI 270
G+ + E L P I+ +SFTG G +I + A I + +ELGGKD
Sbjct: 174 GVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY 232
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329
+ DADLD AA ++V G F SGQ C +++ V ES+ D VE A V +G P +
Sbjct: 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLD 292
Query: 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFC------QEYKREGNLIWPLLLDNVRPDM 383
+ PVV+ +A+F+ + DA K A E K G + P +L NV M
Sbjct: 293 PSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSM 352
Query: 384 RIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQI 443
R+ EE FGPV+ ++++ S E I N S +GL V+T+DI +A + + +ETGTV +
Sbjct: 353 RVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFM 412
Query: 444 NSAPSRGPDHFPFQGLKDSGIGS 466
N P + G+KDSG G
Sbjct: 413 NRCDYLDPA-LAWTGVKDSGRGV 434
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 4e-95
Identities = 154/459 (33%), Positives = 217/459 (47%), Gaps = 14/459 (3%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
NP T + V EV V A+ AQ++WA + RA+ L + L + +
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
AE L E KP DA EV+ + + + + A R+L K+ P K
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPN----KKATVE 116
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
P GVV I P+NYP+ + I PAL AGN++VLKP + + + AG P+
Sbjct: 117 YRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQ 176
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACI 270
G++ VTG G G L ++ ++FTG TG + A +IP+ +ELGGKD I
Sbjct: 177 GVLQVVTGDG-ATGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMI 234
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPE- 329
+L DADL+ AAA V G +GQ C +V+ V ESV D V ++ AK L GA +
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GNLIWPLLLDNVRPDMRIA 386
D DI P+ T + + V DA K A R G P +L +V DM +
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVM 354
Query: 387 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 446
EE FGPVLPV+ + +E I N S +GL VF+RD+ +A I+ +E G V IN
Sbjct: 355 REETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDV 414
Query: 447 PSRGPDH-FPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
PF G+KDSG G + + + K+
Sbjct: 415 LLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 293 bits (752), Expect = 1e-94
Identities = 138/423 (32%), Positives = 203/423 (47%), Gaps = 23/423 (5%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112
+ ++ A A +W KT +RA LL K A +L+E+K +A + E+ KP +A EV
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEV 60
Query: 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKI---PLGVVLAIPPFNYP 169
+ + Y AE L + + + + PLGVVL I P+N+P
Sbjct: 61 EKCAWICRYYAENAEAFLADEPIETDAG-----------KAYVRYEPLGVVLGIMPWNFP 109
Query: 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDF 229
AP L+AGN+++LK + AL + F AGFP+G+ + ++
Sbjct: 110 FWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAI 169
Query: 230 LTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVK 286
+ P + ++ TG + G +++ +AG + +ELGG D I+L+DADLD A VK
Sbjct: 170 IA-DPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVK 228
Query: 287 GGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANF 345
G +GQ C A K +V E V D +EK +A L VG P D D D+ P+ + +
Sbjct: 229 GRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDE 288
Query: 346 IEGLVMDAKQKAATF---CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402
+ V +A AT + G P +L +V P M EE FGPV VI++
Sbjct: 289 LHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKD 348
Query: 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDS 462
EE I N S FGL G VFT D+ +A ++ +E G V IN P PF G+K S
Sbjct: 349 EEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPR-LPFGGVKRS 407
Query: 463 GIG 465
G G
Sbjct: 408 GYG 410
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 3e-93
Identities = 153/445 (34%), Positives = 228/445 (51%), Gaps = 31/445 (6%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111
+ ++ VE A A +W+KTP +R ++L KAA +L+ ++ E +++E A A
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171
V + ++ A +I+G S P ++ + K P+GVVL I P+N PV
Sbjct: 61 VDLAAGMLREAASLITQIIGG-------SIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVI 113
Query: 172 LAVSKIAPALIAGNSIVLK-----PPTQGAVAALHMVHCFHLAGFPKGLISCVTGK---G 223
L IA L AGN++VLK P T + FH AG PKG+++ VT
Sbjct: 114 LGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR-----VFHEAGLPKGVLNVVTHSPEDA 168
Query: 224 SEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLA 280
E+ + L HP++ ++FTG G I++ A + P+ +ELGGK I+LEDADLD A
Sbjct: 169 PEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAA 228
Query: 281 AANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTE 340
A + G F SGQ C + + +V ES+AD VEK+KA KL G + +V+
Sbjct: 229 ANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSA 284
Query: 341 SSANFIEGLVMDAKQKAATFC----QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 396
++A+ ++ LV DA K A + G + P +LDNV PDM I EE FGPV+
Sbjct: 285 AAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVS 344
Query: 397 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPF 456
+IR+ EE + N S +GL VFTRD+ +A+ ++ +E+G V IN P
Sbjct: 345 IIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPH 404
Query: 457 QGLKDSGIGSQGITNSINMMTKIKS 481
G+K SG G I+ T+ K
Sbjct: 405 GGVKSSGYGRFNGKWGIDEFTETKW 429
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 4e-93
Identities = 141/463 (30%), Positives = 233/463 (50%), Gaps = 20/463 (4%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWA-KTPLWKRAELLHKAAAILKEQKA 91
+ +P+T + R+ +V++ V+ A+ A +S + +R LL + A +++E
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFP-GNERTKYC 150
+A + KP A +V + Y ++ GE + P G Y
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGE-------TIPLGPGYFVY- 112
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
T + P GV I P+NYP+ + +APAL AGN++V+KP + AL + AG
Sbjct: 113 -TVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAG 171
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKD 267
P G ++ VTG G+E G L HP ++ ISFTG +TGI++ + A ++P+ +ELGGK
Sbjct: 172 LPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKS 231
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+ DADL+ A +V +GQ C+A LV S+ D ++E++ + L VG
Sbjct: 232 PQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGP 291
Query: 328 PEDDCDITPVVTESSANFIEGLVMDAKQK-AATFCQ-----EYKREGNLIWPLLLDNVRP 381
+D D+ P+++ + +EG V A+ + A G + P LLD+V P
Sbjct: 292 GLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPP 351
Query: 382 DMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441
D R+A EE FGPVL V+ + E I N +++GL V+TRD ++A+ ++ + G V
Sbjct: 352 DSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQV 411
Query: 442 QINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
+N+ + G PF G+K SG G + ++ T+ K+ +
Sbjct: 412 FVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 290 bits (745), Expect = 5e-93
Identities = 157/486 (32%), Positives = 246/486 (50%), Gaps = 28/486 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTP 71
F + + S SGK+ INP T + +V +E+V+ V+ A+ A W K
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 72 LWKRAELLHKAAAILKEQKAPIA--ECLV--KEIAKPAKDAVTEVVRSGDLVSYCAEEGV 127
+R LL+K A +++ + +A E L K + + AK V ++ + Y A
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKC---LRYYAGWAD 120
Query: 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
+I G+ + P + T + P+GV I P+N+P+ + K+APAL AGN++
Sbjct: 121 KIQGK-------TIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTV 172
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
VLKP Q ++AL++ AGFP G+++ V G G G ++ H ++ I+FTG
Sbjct: 173 VLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAV 232
Query: 247 GISISKKAGMIPLQ---MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
G +I + A L+ +ELGGK I+ +DADLD A G F GQ C A
Sbjct: 233 GRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIF 292
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPEDDCDIT--PVVTESSANFIEGLVMDAKQKAAT-F 360
V ES+ D VEK KA+ K VG P D D P V+++ + I + K++ AT
Sbjct: 293 VQESIYDEFVEKFKARAEKRVVGDPFDP-DTFQGPQVSKAQFDKILSYIESGKKEGATLL 351
Query: 361 C--QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
+ + +G I P + +V+ DM+IA EE FGPV+ +++ + +E I N + +GL
Sbjct: 352 TGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLA 411
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478
VFT+DINKA+ +S A++ GTV +N+ PF G K SG G + + T+
Sbjct: 412 AGVFTKDINKALRVSRALKAGTVWVNTYNVFDA-AVPFGGFKQSGFGRELGEEGLEEYTQ 470
Query: 479 IKSTVI 484
+K+ I
Sbjct: 471 VKAVTI 476
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 287 bits (737), Expect = 4e-92
Identities = 148/472 (31%), Positives = 224/472 (47%), Gaps = 37/472 (7%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
NP T + +V EV+ V AK A W++ +RA +LHK A +++ +
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSG--------DLVSYCAEEGVRILGEGKLLVSDSFPGN 144
+A + KP A T + D + E S+P
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGE--------------SYP-Q 105
Query: 145 ERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVH 204
+ + P+GV I P+N P+ L KIAPAL GN++VLKP + A +
Sbjct: 106 DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAE 165
Query: 205 CFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQM 261
+ AG P G+++ V G G E G L HP ++ ISFTG TG +I + A + P+ +
Sbjct: 166 LANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSL 225
Query: 262 ELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321
ELGGK+ I+ DADLD A V+ FS +G+ C A LV S+ D +E+ +
Sbjct: 226 ELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAK 285
Query: 322 KLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC-------QEYKREGNLIWP 373
L VG P D D ++ P++++ + G V A+ + AT G + P
Sbjct: 286 ALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEP 345
Query: 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433
++ + D R+A EE FGPV+ VI + EE I N + +GL V+TRD+ +A ++
Sbjct: 346 TVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVA 405
Query: 434 DAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
+E GTV +N R D PF G+K SGIG +G S+ T++K+ I
Sbjct: 406 RRLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 7e-92
Identities = 151/471 (32%), Positives = 226/471 (47%), Gaps = 34/471 (7%)
Query: 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPLW 73
F G W S +++ +++P T + RV T +V+ V A+ A W +
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
+RA +L + A L+ + +A E P + + L+ Y A
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAA-------- 112
Query: 133 GKLLVSDSFPGNER-----TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
++ FP ER + L + P+GVV AI P+N P+ LA KIAPAL AG ++
Sbjct: 113 ----LARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTV 168
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-T 246
VLKP + + A + AG P G+++ V E+G++L HP ++ +SFTG
Sbjct: 169 VLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAA 227
Query: 247 GISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
G I+ G + + +ELGGK A I+L+DADLD A +V +GQ C A+ LV
Sbjct: 228 GRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILV 287
Query: 305 MESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQE 363
S D +VE + A VA L VG P D I P+ + +EG + + + A
Sbjct: 288 PRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTG 347
Query: 364 YKR-----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
R G + P L +V DMRIA EE FGPVL VI + ++ + N S++GL
Sbjct: 348 GGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLS 407
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGSQG 468
G V+T D+ + + ++ + TGTV +N D PF G K SGIG +G
Sbjct: 408 GSVWTADVERGLAVARRIRTGTVGVNGF---RLDFGAPFGGFKQSGIGREG 455
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 283 bits (727), Expect = 1e-90
Identities = 149/467 (31%), Positives = 229/467 (49%), Gaps = 24/467 (5%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+I P T + V E+V+ V++AK AQK W+ T +R +L KAA +L+E+
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLT 152
IA + KP ++A ++ S D + Y A + GE L SF T
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSF--------AYT 112
Query: 153 SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFP 212
+ PLGV I +NYP+ +A K APAL GN++V KP + AL + AG P
Sbjct: 113 RREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLP 172
Query: 213 KGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269
G+ + V G G E G L HP + +SFTG TG + A G+ + +ELGGK
Sbjct: 173 DGVFNVVQG-GGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPL 231
Query: 270 IILEDADLDLAAANIVKGGFSYSGQRCT-AVKVALVMESVADTLVEKVKAKVAKLTVGAP 328
II +DADL+ A + F GQ C+ +V V S+ D E++ + K+ +G P
Sbjct: 232 IIFDDADLENAVNGAMMANFLSQGQVCSNGTRV-FVQRSIKDEFTERLVERTKKIRIGDP 290
Query: 329 ED-DCDITPVVTESSANFIEGLVMDAKQKAATF-C-------QEYKREGNLIWPLLLDNV 379
D D + +++E + G + AKQ+ A C ++ G + P +L +
Sbjct: 291 LDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDC 350
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439
DM I EE FGPV+ ++ ++ EE I N + +GL VFTRD+ +A + ++ G
Sbjct: 351 TDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAG 410
Query: 440 TVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
T IN+ + P PF G K SG G + T ++ T++K+ + +
Sbjct: 411 TCWINTY-NISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 3e-90
Identities = 141/460 (30%), Positives = 217/460 (47%), Gaps = 23/460 (5%)
Query: 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
F+ DG W + +++ +INP T + V T +V++ V A+ A +W+ T + +R
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEER 60
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
A LL + A + + +A+ + E+ P A V G L +
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGH---LRAAADALKD--- 114
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
F ER L + P+GV I P+N+P+N V K+APAL AG ++VLKP
Sbjct: 115 -----FEFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVA 169
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKA 254
++A+ + AG P G+ + V G G +G+ L+ HP ++ +SFTG G +++ A
Sbjct: 170 PLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAA 229
Query: 255 G--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
+ + +ELGGK A IIL+DADL+ A V F+ SGQ C A LV S
Sbjct: 230 ADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEA 289
Query: 313 VEKVKAKVAKLTVGAPEDDCD-ITPVVTESSANFIEGLVMDAKQKAATFCQ------EYK 365
E A VG P D + P+ + + + ++G + ++ A E
Sbjct: 290 EEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL 349
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
G + P + +V PDM IA EE FGPVL +I + +E I N + +GL G V++ D
Sbjct: 350 ERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSAD 409
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+A ++ + G V IN A PF G K SG G
Sbjct: 410 PERARAVARRLRAGQVHINGAAFNP--GAPFGGYKQSGNG 447
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 3e-90
Identities = 149/492 (30%), Positives = 234/492 (47%), Gaps = 40/492 (8%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K F +G W +S + + + + NP T + RV T EEV+ V AK A +W+ TP+ K
Sbjct: 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLK 61
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R +++ K +L+E +A + E K DA +V+R ++V + + GE
Sbjct: 62 RQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY- 120
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
+ + G + + + PLGVV I PFN+P + + A+ GN+ VLKP +
Sbjct: 121 --LENVARGID----TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSER 174
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD--------T 246
AA+ + AG P G+++ V G G E + L HP I +SF G
Sbjct: 175 VPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYER 233
Query: 247 GISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
+ K+ Q G K+ +++ DADL+ A +V F +GQRC A+ VA+ +
Sbjct: 234 AAANGKRV-----QALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVG 288
Query: 307 SVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAAT------ 359
AD + K+ + KL VGA + D+ PV++ ++ IEGL+ ++ A
Sbjct: 289 DEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGR 348
Query: 360 --FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
Y+ GN + P +LDNV PDM+I EE FGPVL ++R+++++E I NA+ +G
Sbjct: 349 GVKVPGYE-NGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGN 407
Query: 418 QGCVFTRDINKAILISDAMETGTVQIN---SAPSRGPDHFPFQGLKDSGIGSQGIT--NS 472
+FTR A ++ G V IN P F F G K S G +
Sbjct: 408 GAAIFTRSGAAARKFQREVDAGMVGINVPIPVPL---AFFSFGGWKGSFFGDLHFYGKDG 464
Query: 473 INMMTKIKSTVI 484
+ T+ K TV
Sbjct: 465 VRFYTQTK-TVT 475
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 281 bits (722), Expect = 5e-90
Identities = 148/423 (34%), Positives = 220/423 (52%), Gaps = 14/423 (3%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108
+V++ A AQ++WA TP +RA +L +AA +L+E IA+ +V+E A
Sbjct: 11 DAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKA 70
Query: 109 VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168
EV + + A + GE +L S PG R ++PLGVV I PFN+
Sbjct: 71 GFEVGAAIGELHEAAGLPTQPQGE--ILPSA--PG--RLSLA--RRVPLGVVGVISPFNF 122
Query: 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV-HCFHLAGFPKGLISCVTGKGSEIG 227
P+ LA+ +APAL GN++VLKP + V+ ++ F AG P G++ + G G++ G
Sbjct: 123 PLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAG 181
Query: 228 DFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANI 284
+ L P++ ISFTG G + + AG + + +ELGGK+A I+L+DADLDLAA+N
Sbjct: 182 EALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNG 241
Query: 285 VKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSA 343
G F + GQ C A LV ESVAD K+ AK L VG P + P++
Sbjct: 242 AWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQL 301
Query: 344 NFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403
+ + +V D+ A +G P +L V+P M EE FGPV PV +S
Sbjct: 302 DRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSD 361
Query: 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSG 463
EE + N + +GL + +RD+ +A+ ++D + TG + IN H PF G+ SG
Sbjct: 362 EEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASG 421
Query: 464 IGS 466
GS
Sbjct: 422 NGS 424
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 7e-90
Identities = 141/401 (35%), Positives = 215/401 (53%), Gaps = 23/401 (5%)
Query: 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK 103
RV T+E K ++ A A ++W K RA +L +AAAI++ +K + LVKE K
Sbjct: 66 RVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGK 125
Query: 104 PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE-RTKYCLTSKIPLGVVLA 162
P +A + + D + Y A + ++ L +GK + S PG R Y IPLGV +
Sbjct: 126 PWAEADADTAEAIDFLEYYARQMLK-LADGKPVES--RPGEHNRYFY-----IPLGVGVV 177
Query: 163 IPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
I P+N+P + A++AGN+++LKP + V A V AG P G+++ V G
Sbjct: 178 ISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGS 237
Query: 223 GSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMI-PLQ-------MELGGKDACIILE 273
GSE+GD+L HP I+FTG + G+ I ++A + P Q E+GGKDA ++ E
Sbjct: 238 GSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDE 297
Query: 274 DADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCD 333
DADLDLAA +IV F +SGQ+C+A A+V E V D ++EKV +LTVG PED+
Sbjct: 298 DADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAY 357
Query: 334 ITPVVTESSANFIEGLVMDAKQKAATFC--QEYKREGNLIWPLLLDNVRPDMRIAWEEPF 391
+ PV+ ++S + I + K++ + +G I P + +V P RI EE F
Sbjct: 358 MGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIF 417
Query: 392 GPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD---INKA 429
GPV+ I+ + + N + +GL G V + + + KA
Sbjct: 418 GPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKA 458
|
Length = 514 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 9e-88
Identities = 138/469 (29%), Positives = 221/469 (47%), Gaps = 34/469 (7%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
G W S G++ T NP +P RV + E+V V A+ A K W K P +R
Sbjct: 2 VIGGEWV-GSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG 60
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
E++ + L+++K + + E+ K + + EV D+ Y G ++L
Sbjct: 61 EIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAV-------GLSRML 113
Query: 137 VSDSFPGNERT-KYCLTSKIPLGVVLAIPPFNYPVNLAVS--KIAPALIAGNSIVLKPPT 193
+ P +ER + PLGVV I FN+PV AV A AL+ GN++V KP
Sbjct: 114 YGLTIP-SERPGHRLMEQWNPLGVVGVITAFNFPV--AVPGWNAAIALVCGNTVVWKPSE 170
Query: 194 QGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG----- 244
+ A+ + G P G+++ VTG G + G+ L P + +SFTG
Sbjct: 171 TTPLTAIAVTKILAEVLEKNGLPPGVVNLVTG-GGDGGELLVHDPRVPLVSFTGSTEVGR 229
Query: 245 DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
G +++++ G + L ELGG +A I+++DADLDLA ++ +GQRCT + +V
Sbjct: 230 RVGETVARRFGRVLL--ELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIV 287
Query: 305 MESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQE 363
ESV D +E++ ++ +G P ++ + P++ +++ + AK + T
Sbjct: 288 HESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTG 347
Query: 364 YKR-----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
KR GN + P ++ V D RI EE F P+L VI+ +S+EE I N GL
Sbjct: 348 GKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLS 407
Query: 419 GCVFTRDINKAILISDAM--ETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+FT D+ +A + G V +N S F G K++G G
Sbjct: 408 SSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG 456
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 4e-87
Identities = 169/487 (34%), Positives = 259/487 (53%), Gaps = 26/487 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
Y F +G W K SSG+++ NP + + T +V++ V+ A+ A K+W KT +
Sbjct: 1 YGLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVA 60
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
+RA +L+K A I+ E K +A + KP ++ ++ + D Y A GV E
Sbjct: 61 ERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFA--GVIRAEE 118
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
G + D E T + + P+GVV I P+N+P +A K+APAL AGN++V+KP
Sbjct: 119 GSANMID-----EDT-LSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPS 172
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-----DTG 247
+ +++ L + PKG+++ VTGKGS+ G++L HP ++ ++FTG D
Sbjct: 173 STTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVA 231
Query: 248 ISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
I+ +KK +IP +ELGGK A II +DA+ D A G GQ C A V E
Sbjct: 232 IAAAKK--LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEG 289
Query: 308 VADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR 366
+ D V K+K K + VG P + D + V + + I V AK++ A R
Sbjct: 290 IYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHR 349
Query: 367 -------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+G I P L+ NV DMR+A EE FGPV VI+ + +E I N S +GL G
Sbjct: 350 LTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGG 409
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
VFT+DIN+A+ ++ A+ETG V +N+ ++ P PF G K SGIG + + ++ T++
Sbjct: 410 GVFTKDINRALRVARAVETGRVWVNTY-NQIPAGAPFGGYKKSGIGRETHKSMLDAYTQM 468
Query: 480 KSTVINL 486
K+ I+L
Sbjct: 469 KNIYIDL 475
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 274 bits (703), Expect = 9e-87
Identities = 158/488 (32%), Positives = 246/488 (50%), Gaps = 28/488 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPLW 73
F + + KSS G+++ +NP+T + V A +E+V+K V+ A+ A +S W+K
Sbjct: 9 GLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGE 68
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKP----AKDAVTEVVRSGDLVSYCAEEGVRI 129
+R ELL K A ++++ + +A + KP A + E++ ++ Y A +I
Sbjct: 69 ERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEII---AVIRYYAGWADKI 125
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
G+ + P K T P GV I P+NYP+ +A K+APAL AGN++V+
Sbjct: 126 QGK-------TIP-TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVI 177
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
KP ++ L+ + AGFP G+++ + G G+ G L HP ++ I+FTG TG
Sbjct: 178 KPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGR 237
Query: 249 SISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
+ K A + + +E GGK ++ EDADLD A G SGQ CTA V E
Sbjct: 238 LVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQE 297
Query: 307 SVADTLVEKVKAKVAK-LTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAA------ 358
S+ D VEK V + VG+P +DD + P V+++ + + + K++ A
Sbjct: 298 SIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG 357
Query: 359 TFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
E +G I P + +V DMRI EE FGPV+ + + + EE I N + +GL
Sbjct: 358 EKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLA 417
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478
VFT+DI +A ++ +E G V INS+ PF G K SGIG + + T+
Sbjct: 418 AAVFTKDIRRAHRVARELEAGMVWINSSNDSDV-GVPFGGFKMSGIGRELGEYGLETYTQ 476
Query: 479 IKSTVINL 486
K+ INL
Sbjct: 477 TKAVHINL 484
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 273 bits (700), Expect = 2e-86
Identities = 156/463 (33%), Positives = 243/463 (52%), Gaps = 10/463 (2%)
Query: 23 RKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82
K S + + + P V + ++V + A + + + ++R+ +L +A
Sbjct: 11 EKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRPTLTR---YERSAILDRA 67
Query: 83 AAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFP 142
AA+L +K I++ + E KD++ EV R D++++ A E +R +G++ D P
Sbjct: 68 AALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALR--DDGQIFSCDLTP 125
Query: 143 GNERTKYCLTSKIPL-GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALH 201
+ K T + PL GV+ AI PFN+P+N KIAPA+ N +V+KP + ++AL+
Sbjct: 126 HGKARK-VFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALY 184
Query: 202 MVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQ 260
+ + AG P ++ VTG EI D L +P ++ ++FTGG G I+ +AG
Sbjct: 185 LADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYRRQV 244
Query: 261 MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKV 320
+ELGG D I++EDADLD AA VKG + SGQRCTAVK LV ESVAD E + K
Sbjct: 245 LELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKT 304
Query: 321 AKLTVGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNV 379
G P D D+ V+ E++A E V +A + A R+G L P +LD V
Sbjct: 305 RAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRV 364
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439
P M + EE FGPV PVIR +++ I N++ +GL V T ++ ++ G
Sbjct: 365 DPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVG 424
Query: 440 TVQINSAPSRGPDHFPFQGLKDSGIGS-QGITNSINMMTKIKS 481
TV + P + PF G+KDSG+G +G+ ++ T +K+
Sbjct: 425 TVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKT 467
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 2e-84
Identities = 165/495 (33%), Positives = 248/495 (50%), Gaps = 35/495 (7%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
F DG + S SG++ ++P T + V +V++ + AK A K WA+ +
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAE 61
Query: 75 RAELLHKAAAILKEQKAP---IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGV-RIL 130
R LHK A ++ EQ A + ECL + +P + +V+R+ + + A++ +
Sbjct: 62 RKRYLHKIADLI-EQHADEIAVLECL--DCGQPLRQTRQQVIRAAENFRFFADKCEEAMD 118
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G ++P + Y T ++P+G V I P+N P L+ KIAPAL GN++VLK
Sbjct: 119 GR-------TYPVDTHLNY--TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLK 169
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISI 250
P + A + AG P G+ + V G G E G L HP + +SFTG SI
Sbjct: 170 PAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSI 229
Query: 251 SKKAGMIPLQ---MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
+ G L+ MELGGK I+ +DADL+ A +V FS++G+RCTA LV ES
Sbjct: 230 IMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQES 289
Query: 308 VADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAAT------- 359
+A+ VEK+ +V + VG P D + ++ P++ + G V A+++ AT
Sbjct: 290 IAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGER 349
Query: 360 ---FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG 416
F E GN + P + MRIA EE FGPVL VI EE I N + +G
Sbjct: 350 APTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYG 409
Query: 417 LQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF--PFQGLKDSGIGSQGITNSIN 474
L G V+T D+ +A ++ A+E G + +NS R H PF G+K SGIG +G T S +
Sbjct: 410 LAGYVWTNDVGRAHRVALALEAGMIWVNSQNVR---HLPTPFGGVKASGIGREGGTYSFD 466
Query: 475 MMTKIKSTVINLPTP 489
T+ K+ + L
Sbjct: 467 FYTETKNVALALGPH 481
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 264 bits (678), Expect = 5e-83
Identities = 150/487 (30%), Positives = 236/487 (48%), Gaps = 23/487 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPLWK 74
+ DG W +++SGK+ IINP + V T E+ + + A+ A W P +
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
RA LL + A ++E +A K +++ ++ + Y A + GE
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGE-- 118
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
P + ++ T + P+GV I P+NYP+ A K+APAL AGN++V+KP
Sbjct: 119 ---VYDVPPHVISR---TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEV 172
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253
+ + + AG P G+++ VTG G+ +G L P ++ +SFTGG TG SI +
Sbjct: 173 TPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232
Query: 254 AG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADT 311
A + + +ELGGK+ I+ DAD + A + G F +GQ C+A LV ES+ D
Sbjct: 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDK 292
Query: 312 LVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR---- 366
V + + K+ +G D D ++ P+V+ + + K++ A KR
Sbjct: 293 FVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGD 352
Query: 367 ---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
+G + P + D+V MRI EE FGPVL V R ++ EE I N + +GL G V+T
Sbjct: 353 ELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWT 412
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
+DI +A ++ + GTV IN + P+ G K SGIG + + + K
Sbjct: 413 KDIARANRVARRLRAGTVWINDYHPYFAEA-PWGGYKQSGIGRELGPTGLEEYQETKHIN 471
Query: 484 INL-PTP 489
INL P P
Sbjct: 472 INLSPQP 478
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 9e-82
Identities = 153/474 (32%), Positives = 224/474 (47%), Gaps = 25/474 (5%)
Query: 8 VDENGVYKF--FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK 65
+ G+ + G W + GK+ + NP T + V + E N + +A A
Sbjct: 17 LRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP 76
Query: 66 SWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEE 125
SW+K +R+++L + ++ K +A+ + E KP K+A+ EV + Y AEE
Sbjct: 77 SWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEE 136
Query: 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185
R+ G D P + L K P+GVV AI P+N+P+ + K+ PAL AG
Sbjct: 137 AKRVYG-------DIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGC 189
Query: 186 SIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD 245
++V+KP + AL AG P G+++ V G EIGD L P + I+FTG
Sbjct: 190 TVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGST 249
Query: 246 -TGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
G + A + + +ELGG I+ +DADLD+A + F SGQ C
Sbjct: 250 AVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRI 309
Query: 303 LVMESVADTLVEKVKAKVAKLTVG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361
LV E + D E V KL VG E+ P++ E++ +E V DA K A
Sbjct: 310 LVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVL 369
Query: 362 QEYKRE---GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
KR G P +L +V DM I EE FGPV P+ R + EE I N + GL
Sbjct: 370 LGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLA 429
Query: 419 GCVFTRDINKAILISDAMETGTVQIN----SAPSRGPDHFPFQGLKDSGIGSQG 468
+FTRD+ +A +S+A+E G V +N S PF G+K SG+G +G
Sbjct: 430 AYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVA-----PFGGVKQSGLGREG 478
|
Length = 498 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 259 bits (665), Expect = 2e-81
Identities = 143/447 (31%), Positives = 217/447 (48%), Gaps = 15/447 (3%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWA-KTPLWKRAELLHKAAAILKEQKA 91
+INP T + +V+ + A+ A + T +RA L + L+ +K
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSG-DLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
+ LV E+ P A V + Y A+ E L V G R
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRR--- 117
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
+ + P+GVV AI P+N+P L ++K+APAL AGN++VLKP ++AL +
Sbjct: 118 VVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETD 177
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKD 267
P G+++ VTG + +G+ LT P ++ +SFTG G I +A + + +ELGGK
Sbjct: 178 LPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKS 237
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
A I+L+DADL AA V +GQ C LV S D +VE + A L VG
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297
Query: 328 PED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNL-----IWPLLLDNVRP 381
P D + P+++ + + +EG + + + A R L + P L +V
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDN 357
Query: 382 DMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441
DMRIA EE FGPVL VI + +E + N S++GL G V++ D+++A ++ + TG+V
Sbjct: 358 DMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSV 417
Query: 442 QINSAPSRGPDHFPFQGLKDSGIGSQG 468
IN GPD PF G K SG+G +
Sbjct: 418 GINGGGGYGPDA-PFGGYKQSGLGREN 443
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 260 bits (666), Expect = 2e-81
Identities = 160/482 (33%), Positives = 241/482 (50%), Gaps = 21/482 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
K F + W S SGK+ INP T + VQ + +V+K V+ A+ A K W
Sbjct: 8 KIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMD 67
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRIL 130
+R LL+K A +++ +A +A + KP +K + ++ + ++ Y A +I
Sbjct: 68 ASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKI- 126
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
GK + D G+ + T P+GV I P+N+P+ +A K+APAL GN++VLK
Sbjct: 127 -HGKTIPMD---GDF---FTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLK 179
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P Q + AL++ AGFP G+++ V G G G ++ HP I+ ++FTG + G
Sbjct: 180 PAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKL 239
Query: 250 ISKKAGMIPLQ---MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
I + AG L+ +ELGGK I+ DADLD A + F GQ C A V E
Sbjct: 240 IQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQE 299
Query: 307 SVADTLVEKVKAKVAKLTVGAPEDDC-DITPVVTESSANFIEGLVMDAKQKAATFCQEYK 365
S+ D V++ + K VG P D + P + E I L+ K++ A K
Sbjct: 300 SIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK 359
Query: 366 REGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
R G+ I P + +V DMRIA EE FGPV + + +++E I N + +GL VF
Sbjct: 360 RHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVF 419
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+DI+KAI S+A+ GTV +N P PF G K SG G + + T++K+
Sbjct: 420 TKDIDKAITFSNALRAGTVWVNCYNVVSP-QAPFGGYKMSGNGRELGEYGLQEYTEVKTV 478
Query: 483 VI 484
I
Sbjct: 479 TI 480
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 1e-80
Identities = 155/462 (33%), Positives = 235/462 (50%), Gaps = 17/462 (3%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+NP T + RV + E+V+ V A+ A ++W+ +R +L + A ++
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 93 IAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCL 151
+A + KP + A +V R+ D Y A +I GE + V F Y
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGE-VIPVRGPF-----LNY-- 112
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211
T + P+GVV AI P+N+P+ A K+APAL AGN++VLKP ++AL + AGF
Sbjct: 113 TVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGF 172
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDA 268
P G+++ VTG G G L HP ++ I+FTG G I + A + + +ELGGK A
Sbjct: 173 PAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSA 232
Query: 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328
I+ DADLD A G F GQ CTA LV ES+ D +E+ + L G P
Sbjct: 233 NIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDP 292
Query: 329 ED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GNLIWPLLLDNVRPDMR 384
D + P+V+++ + + V +++ A KR G + P + V P+MR
Sbjct: 293 LDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMR 352
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN 444
IA EE FGPV+ V+R EE + N + +GL V+TRD+ +A ++ A++ GTV IN
Sbjct: 353 IAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN 412
Query: 445 SAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
+ P PF G K SG G + +++ T++KS +NL
Sbjct: 413 TYNRFDPG-SPFGGYKQSGFGREMGREALDEYTEVKSVWVNL 453
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-80
Identities = 151/467 (32%), Positives = 222/467 (47%), Gaps = 25/467 (5%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+INP T + V +V++ V AK A WA TP +R +LL + A L+ +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 93 IAECLVKEIAKPAK-DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCL 151
+A L E + A E DL Y + GE + P
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGE-------TLPFGPDV-LTY 112
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211
T + PLGVV AI P+N P+ LA KIAPAL+AGN++VLK +A L +
Sbjct: 113 TVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILA-QVL 171
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDA 268
P G+++ +TG G E G L HP ++ ++FTG + G I + A +IP+ +ELGGK
Sbjct: 172 PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSP 231
Query: 269 CIILEDADLDLAAANIVKG-GFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+ DADLD A + G F+ GQ CTA V E + D +EK+ AK++KL +G
Sbjct: 232 MIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGD 291
Query: 328 PED-DCDITPVVTESSANFIEGLVMDAKQKAAT---FCQEYKREGNL-----IWPLLLDN 378
P D DI +++E + G + + EG L + P +
Sbjct: 292 PLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSG 351
Query: 379 VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMET 438
V + R+A EE FGPVL I +E I N S++GL V+TRD+ +A+ + A+E
Sbjct: 352 VDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEA 411
Query: 439 GTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNS-INMMTKIKSTVI 484
G VQ+N + P + G K SG+G + + T+ K+ I
Sbjct: 412 GWVQVNQGGGQQPG-QSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 2e-80
Identities = 151/471 (32%), Positives = 235/471 (49%), Gaps = 45/471 (9%)
Query: 25 SSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAA 84
++G + + P T +P V T +V A+ AQ++WA TP+ +RA +L +
Sbjct: 28 GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHD 87
Query: 85 ILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLV---SYCAEEGVRILGEGKLLVSDSF 141
++ E + + + + E K + A EV+ D+ Y A ++L + + +
Sbjct: 88 LVLENREELLDLVQLETGKARRHAFEEVL---DVALTARYYARRAPKLLAPRR--RAGAL 142
Query: 142 PGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALH 201
P +T + P GVV I P+NYP+ LAVS PAL+AGN++VLKP +Q + AL
Sbjct: 143 PVLTKTT---ELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALA 199
Query: 202 MVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIP 258
V + AG P+ L VTG G +G L + + + FTG TG ++++AG +I
Sbjct: 200 AVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRRLIG 257
Query: 259 LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318
+ELGGK+ I+L+DADLD AAA V+ FS +GQ C +++ V ES+ D V A
Sbjct: 258 FSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVA 317
Query: 319 KVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAAT-------------FCQEY 364
V + +GA D D+ +++E+ + V DA K AT E
Sbjct: 318 AVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYE- 376
Query: 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
P +L V PDM +A EE FGPV+ V + V+E + N + +GL V+T
Sbjct: 377 --------PTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTG 428
Query: 425 DINKAILISDAMETGTVQINS--APSRGPDHFPFQGLKDSGI----GSQGI 469
D + I+ + GTV +N A + G P G+KDSG+ G++G+
Sbjct: 429 DTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGL 479
|
Length = 524 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 4e-80
Identities = 155/486 (31%), Positives = 238/486 (48%), Gaps = 30/486 (6%)
Query: 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTP 71
+ + DG + +++SG++ +INP T + VQA T +V V +AK QK WA
Sbjct: 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMT 64
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRIL 130
+R+ +L +A IL+E+ +A + KP ++ V ++V D++ Y A +
Sbjct: 65 AMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALE 124
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
GE L SF Y T + PLGV I +NYP+ +A K APAL AGN+++ K
Sbjct: 125 GEQIPLRGGSF------VY--TRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFK 176
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + AL + + AG P G+ + V G G +G +LT HP I +SFTGG TG
Sbjct: 177 PSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIAKVSFTGGVPTG-- 233
Query: 250 ISKK------AGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
KK A + + MELGGK I+ +DADLD AA + F SGQ CT
Sbjct: 234 --KKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVF 291
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
V +S+ ++ +V ++ +G P D + P+V+ + + + G + K + A
Sbjct: 292 VQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLC 351
Query: 363 EYKR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 415
+R G + P + + DM I EE FGPV+ V+ + +E I N + +
Sbjct: 352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEY 411
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475
GL VFT D+++A + +E G IN+ P P G K SGIG + ++
Sbjct: 412 GLAAGVFTADLSRAHRVIHQLEAGICWINTW-GESPAEMPVGGYKQSGIGRENGIATLEH 470
Query: 476 MTKIKS 481
T+IKS
Sbjct: 471 YTQIKS 476
|
Length = 488 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 1e-79
Identities = 146/477 (30%), Positives = 238/477 (49%), Gaps = 23/477 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG + + S+G + IINP + V A T E+V + + A+ AQ WA +R
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSG-DLVSYCAEEGVRILGEGKL 135
+L +AA +++E+ +A+ + K ++ + + SG D+ + A G+ G++
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFA--GLAPALNGEI 118
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
+ G T + PLGV + I +NYP+ +A KIAPAL AGN++V KP
Sbjct: 119 I---PLGGPSFAY---TIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENT 172
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA 254
+ AL + AG PKG+ + V G G+E+G L HP + +SFTGG TG I A
Sbjct: 173 PLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAA 232
Query: 255 G--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
+ + MELGGK I+ +DADL+ A + G F +GQ C+ V + + +
Sbjct: 233 AGHLKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERF 292
Query: 313 VEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR----- 366
+ ++ + ++ +G P D ++ P+++ + + + + K + AT R
Sbjct: 293 LARLVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVG 352
Query: 367 --EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
G + P + + DM I EE FGPV+ V+ + +E I N + +GL G VFT
Sbjct: 353 LQNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTA 412
Query: 425 DINKAILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
D+ +A ++D +E GTV IN+ P PF G K SGIG + ++ T++K
Sbjct: 413 DLGRAHRVADQLEAGTVWINTYNLY--PAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 4e-79
Identities = 157/473 (33%), Positives = 243/473 (51%), Gaps = 27/473 (5%)
Query: 28 GKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWKRAELLHKAAAI 85
G++ INP T + V AC +V++ V A+ A +S W++ +R +L + A +
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 86 LKEQKAPIA--ECLVKEIAKPAKDAVTEVVRSG-DLVSYCAEEGVRILGEGKLLVSDSFP 142
++ + +A E L ++ KP DA+ V S + + AE ++ GE V+ + P
Sbjct: 61 IEAHRDELALLETL--DMGKPISDALAVDVPSAANTFRWYAEAIDKVYGE----VAPTGP 114
Query: 143 GNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202
L ++ PLGVV A+ P+N+P+ +A KIAPAL AGNS+VLKP Q + AL +
Sbjct: 115 DA----LALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRL 170
Query: 203 VHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAG---MIP 258
AG P G+++ V G G G+ L +H ++ ++FTG + G + +G +
Sbjct: 171 AELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKR 230
Query: 259 LQMELGGKDACIILEDA-DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVK 317
+ +E GGK I+ DA DLD AA G F G+ C+A LV ES+ D +EKV
Sbjct: 231 VWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVV 290
Query: 318 AKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE-----GNLI 371
A + G P D + +V+E+ + + G + K + A KR G +
Sbjct: 291 AAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFV 350
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P + D V PDMRIA EE FGPVL VI +S EE + N S +GL V+T D+++A
Sbjct: 351 EPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHR 410
Query: 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
++ + GTV +N G PF G K SG G ++++ T++K+T I
Sbjct: 411 VARRLRAGTVWVN-CFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 254 bits (650), Expect = 6e-79
Identities = 160/469 (34%), Positives = 229/469 (48%), Gaps = 27/469 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
Y F +G W S G+ NP K + T E+V+ V+ A A K+W KT +
Sbjct: 1 YDNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVA 60
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
+RA +L+K A ++E +A + KP ++ + ++ + D Y A GV E
Sbjct: 61 ERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFA--GVIRAQE 118
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
G L D + Y PLGVV I P+N+P+ +A K+APAL AGN++VLKP
Sbjct: 119 GSLSEIDE----DTLSYHFHE--PLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPA 172
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+Q ++ L ++ PKG+++ VTG GSE G L HP I ++FTG G I
Sbjct: 173 SQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIM 231
Query: 252 KKAG--MIPLQMELGGKDACIILEDA-----DLDLAAANIVKGGFSYSGQRCTAVKVALV 304
+ A +IP+ +ELGGK I +DA D D A G G+ CT ALV
Sbjct: 232 QYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALV 291
Query: 305 MESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQE 363
ES+ D +E+ + + VG P D + + V++ I V K++ A
Sbjct: 292 QESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTG 351
Query: 364 YKR-------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG 416
+R +G P L+ DMRI EE FGPVL VI EE I N + +G
Sbjct: 352 GERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYG 411
Query: 417 LQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
L G V+TRDIN+A+ ++ ++TG V +N P H PF G K SGIG
Sbjct: 412 LGGGVWTRDINRALRVARGIQTGRVWVNCYHQY-PAHAPFGGYKKSGIG 459
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 6e-79
Identities = 161/481 (33%), Positives = 237/481 (49%), Gaps = 20/481 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKSWA-KTPLWK 74
F +G + S G +V + NP+T K ++ T+ +V+ VE A A + W K K
Sbjct: 10 FINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSK 69
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEG 133
R L K A +++ +A + K A +V S D Y +I G
Sbjct: 70 RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI--HG 127
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+++ +D K T P+GV I P+N+P+ + KIAPAL AGN+IVLKP
Sbjct: 128 QVIETDI------KKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSE 181
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG----GDTGIS 249
++AL+M AGFP G+I+ V+G G G+ ++ H I+ ++FTG G +
Sbjct: 182 LTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVME 241
Query: 250 ISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
+ K+ + + +ELGGK I+ +DADL+ A G F GQ C A V E +
Sbjct: 242 AAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY 301
Query: 310 DTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREG 368
D V++ K K KL VG P +D P V++ I + K + AT KR G
Sbjct: 302 DKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHG 361
Query: 369 NL---IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
N I P + +V DM+I EE FGPV+ VI+ + EE I N S +GL VFT +
Sbjct: 362 NEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNN 421
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
IN AI +++A++ GTV +N PF G K SGIG + ++ T+IK+ IN
Sbjct: 422 INNAIRVANALKAGTVWVNCYNLLHH-QVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480
Query: 486 L 486
L
Sbjct: 481 L 481
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 8e-79
Identities = 147/470 (31%), Positives = 228/470 (48%), Gaps = 30/470 (6%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+INP T + RV A + +V++ V A+ A W T +RA +L + A L+E
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFP-GNERTKYCL 151
+A + P + +V+ + L+ Y A + GE + P G Y
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGE-------TIPVGGRNLHY-- 111
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211
T + P GVV I FN+P+ A +KIA L AGN++V+KPP Q ++AL +
Sbjct: 112 TLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELA-REVL 170
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDA 268
P G+ + + G G+ G L HP + I+ G TG +I + A G+ + +ELGGK+A
Sbjct: 171 PPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230
Query: 269 CIILEDADLDLAAANIVKG-GFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+ DAD + AA V G F++ GQ C + V ES+ D ++ +V +VA + VG
Sbjct: 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290
Query: 328 PED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-------EGNLIWPLLLDNV 379
P D + P+V+ + + + AK++ A R G + P + +V
Sbjct: 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439
P MRIA EE FGPVL V+R E + N +GL ++T DI++A + +E G
Sbjct: 351 TPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAG 410
Query: 440 TVQINSAPSRGPDHF---PFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
V IN + HF PF G+K+SGIG + + T+ K+ + L
Sbjct: 411 YVWINGSSR----HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVRL 456
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 1e-78
Identities = 150/451 (33%), Positives = 231/451 (51%), Gaps = 21/451 (4%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
P T +P + T +V A+ AQ++WA P +RA + + ++ E++ +
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
+ + E K + A EV+ + Y A R+L + + P RT
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRR--RRGAIPVLTRTTVN--- 115
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
+ P GVV I P+NYP+ LAVS PAL+AGN++VLKP +Q A+ AL V AG P+
Sbjct: 116 RRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPR 175
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKDACI 270
L VTG GSE+G + + + + FTG TG ++++AG +I +ELGGK+ I
Sbjct: 176 DLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMI 233
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED 330
+LEDADLD AAA V+ FS +GQ C +++ V ESV D V + A+ L +GA D
Sbjct: 234 VLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALD 293
Query: 331 -DCDITPVVTESSANFIEGLVMDAKQKAAT-FCQEYKRE--GNLIW-PLLLDNVRPDMRI 385
D+ +++++ + + V DA K AT R G + P +L V DM +
Sbjct: 294 YGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMEL 353
Query: 386 AWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445
EE FGPV+ + R+ +E I N +++GL V+TRD + I+ + GTV +N
Sbjct: 354 FAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNE 413
Query: 446 --APSRGPDHFPFQGLKDSGI----GSQGIT 470
A + P G+KDSG+ G++G+
Sbjct: 414 GYAAAWASIDAPMGGMKDSGLGRRHGAEGLL 444
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 254 bits (649), Expect = 2e-78
Identities = 143/440 (32%), Positives = 217/440 (49%), Gaps = 26/440 (5%)
Query: 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK 103
V +QE ++ A A ++W KT +RA +L KAAAI++ ++ + LVKE+ K
Sbjct: 62 TVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEFSALLVKEVGK 121
Query: 104 PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAI 163
P +A EV + D + Y A + + + +S G E +Y T P GV + I
Sbjct: 122 PWNEADAEVAEAIDFMEYYARQMIELAKGK---PVNSREG-ETNQYVYT---PTGVTVVI 174
Query: 164 PPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKG 223
P+N+P + V ++ GN +VLKP V A V AG PKG++ V G G
Sbjct: 175 SPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSG 234
Query: 224 SEIGDFLTMHPSINCISFTGG-DTGISISKKAGMI-PLQ-------MELGGKDACIILED 274
SE+GD+L HP + I+FTG + G I ++A + P Q E+GGKD I+ ED
Sbjct: 235 SEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDED 294
Query: 275 ADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCD 333
AD++LAA + F ++GQ+C+A A+V E V D +VE+ L VG P+ D
Sbjct: 295 ADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSADVY 354
Query: 334 ITPVVTESSANFIEGLVMDAKQ--KAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPF 391
+ PV+ + S N I + K + + +G I P + +V R+A EE F
Sbjct: 355 VGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIFADVDRKARLAQEEIF 414
Query: 392 GPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD---INKAILISDAMETGTVQINSAPS 448
GPV+ IR + +E + N + +GL G V + + IN+A E G + N +
Sbjct: 415 GPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRA---KAEFEVGNLYFNRNIT 471
Query: 449 RG-PDHFPFQGLKDSGIGSQ 467
+ PF G K SG S+
Sbjct: 472 GAIVGYQPFGGFKMSGTDSK 491
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 2e-75
Identities = 150/449 (33%), Positives = 227/449 (50%), Gaps = 28/449 (6%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+INP T + A T E+V+ V A+ A W KT +RA+ L A ++E++
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE------EGVRILGEGKL-LVSDSFPGNE 145
+AE ++ KP +A +V D V+ C E E + E + L S+ F
Sbjct: 61 LAELEARDNGKPLDEAAWDV----DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARV 116
Query: 146 RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC 205
R + P+GVV I P+N+P+ +A K+APAL AG ++VLKP ++ L +
Sbjct: 117 R-------REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEI 169
Query: 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKA--GMIPLQME 262
AG P G+++ VTG G E G L HP I+ ISFTG TG + + A + P+ +E
Sbjct: 170 AAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLE 229
Query: 263 LGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK 322
LGGK I+ +DADL+ A + G F +GQ C+A LV ES+AD +E++
Sbjct: 230 LGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEA 289
Query: 323 LTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-----EGNLIWPLLL 376
+ VG P E+ + P+V+++ + + K++ A +R +G I P +
Sbjct: 290 IRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVF 349
Query: 377 DNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM 436
+V D RI EE FGPVL V + +E I N S +GL V +RD + +++A+
Sbjct: 350 ADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEAL 409
Query: 437 ETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
E G V IN + P P+ G K SGIG
Sbjct: 410 EAGIVWINCSQPCFP-QAPWGGYKRSGIG 437
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 3e-75
Identities = 123/434 (28%), Positives = 201/434 (46%), Gaps = 39/434 (8%)
Query: 32 TIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90
+I+P + V E+V+ + A A W+ TP+ +RAE+L KAA +L+ +
Sbjct: 49 PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANR 108
Query: 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC 150
+ E K DA EV + D Y A + + + +L E
Sbjct: 109 GELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTG----ELNGLE 164
Query: 151 LTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG 210
L GV + I P+N+P+ + +IA AL AGN+++ KP Q + A V H AG
Sbjct: 165 LH---GRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAG 221
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK-----KAGMIPLQMELG 264
P+ ++ V G G EIG+ L HP I+ + FTG +T I++ ++PL E G
Sbjct: 222 VPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETG 281
Query: 265 GKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324
GK+A I+ A + A ++V+ F +GQRC+A+++ + E +A+ +E +K +A L
Sbjct: 282 GKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLK 341
Query: 325 VGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDM 383
VG P D D+ P++ + + + + + E LI P LD+
Sbjct: 342 VGDPWDLSTDVGPLIDKPAGKLLRAH-----------TELMRGEAWLIAPAPLDDGNGYF 390
Query: 384 ---RIAW--------EEPFGPVLPVIRINS--VEEGIHHCNASNFGLQGCVFTRDINKAI 430
I E FGP+L VIR + ++E I NA+ +GL + +RD +
Sbjct: 391 VAPGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIE 450
Query: 431 LISDAMETGTVQIN 444
+ +E G + IN
Sbjct: 451 YWRERVEAGNLYIN 464
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 9e-75
Identities = 145/460 (31%), Positives = 224/460 (48%), Gaps = 24/460 (5%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+ NP T + V +E + A A K+W T +R+ LL K ++ E K
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLT 152
+A + E KP K+A E++ + + + AEE R+ G D+ P + K +
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYG-------DTIPSPQSDKRLIV 113
Query: 153 SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFP 212
K P+GV AI P+N+P + K AL AG ++V+KP Q ++AL + AG P
Sbjct: 114 IKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIP 173
Query: 213 KGLISCVTG-KGSEIGDFLTMHPSINCISFTGG-DTG-ISISKKAGMIP-LQMELGGKDA 268
KG+++ +TG + E+G+ LT P + ISFTG + G I + + A + + MELGG
Sbjct: 174 KGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAP 233
Query: 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG-A 327
I+ +DADLD A + F +GQ C V + + D +K+ V KL VG
Sbjct: 234 FIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNG 293
Query: 328 PEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GNLIWPLLLDNVRPDMR 384
++ P++ E + +E + DA +K A KR GN P +L NV DM
Sbjct: 294 LDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADML 353
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN 444
++ EE FGP+ PV + + EE I N + GL F+RD+++ +++A+E G V IN
Sbjct: 354 VSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGIN 413
Query: 445 ----SAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
S PF G+K SG+G +G I + K
Sbjct: 414 TGLISNVV-----APFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 2e-74
Identities = 136/429 (31%), Positives = 216/429 (50%), Gaps = 18/429 (4%)
Query: 47 ACTQEEVNKVVETAKLA--QKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104
T E+V+ V A+ A + W + +RA +L K A +++ ++ +A E KP
Sbjct: 15 EGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKP 74
Query: 105 AKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164
A E+ + DL Y A + L DS+ L + P+GVV I
Sbjct: 75 ISQARGEIEGAADLWRYAA-------SLARTLHGDSYNNLGDDMLGLVLREPIGVVGIIT 127
Query: 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGS 224
P+N+P + K+ AL AG ++V+KP + L + AG P G+++ VTG G+
Sbjct: 128 PWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGA 187
Query: 225 EIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKDACIILEDADLDLAA 281
+G +T HP ++ +SFTG G +I+ A + + +ELGGK+ I+ DADLD AA
Sbjct: 188 TVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADLDAAA 247
Query: 282 ANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTE 340
+V G + +G+ C + LV ES+AD V V A+ K+ VG P + + + ++ E
Sbjct: 248 DAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINE 307
Query: 341 SSANFIEGLVMDAKQKAATFC----QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 396
+ I V + + AT + G P + +V PDM IA EE FGPVL
Sbjct: 308 AQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLS 367
Query: 397 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPF 456
V+ ++V+E I N + +GL V+++DI+ A+ ++ + GTV +N+ P+ PF
Sbjct: 368 VLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPE-LPF 426
Query: 457 QGLKDSGIG 465
G K SGIG
Sbjct: 427 GGFKQSGIG 435
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 240 bits (615), Expect = 4e-74
Identities = 142/453 (31%), Positives = 210/453 (46%), Gaps = 42/453 (9%)
Query: 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92
+++P T + V + +V+ V A A SW +T +R++ L K A ++E
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 93 IAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYC- 150
+A + KP E+ + D + A R L G +Y
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAG-AARTL-----------EGPAAGEYLP 108
Query: 151 -LTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206
TS I P+GVV I P+NYP+ +A KIAPAL AGN++VLKP + L +
Sbjct: 109 GHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAE-- 166
Query: 207 HLA--GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQM 261
LA P G+++ V G G+ GD L HP + +S TG TG +++ A + + +
Sbjct: 167 -LAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHL 225
Query: 262 ELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321
ELGGK I+ +DADLD A A I G+ +GQ CTA V ESV D V + V+
Sbjct: 226 ELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVS 285
Query: 322 KLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN--LIWPLLLDN 378
+ VG P+D D ++ P+ + + + G V A A + EG P ++
Sbjct: 286 AIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAG 345
Query: 379 VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMET 438
V D I EE FGPV+ V + +E I N +GL V+TRD+ +A+ +S ++
Sbjct: 346 VAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDF 405
Query: 439 GTVQINSAPSRGPDHF------PFQGLKDSGIG 465
GTV +N H P G K SG G
Sbjct: 406 GTVWVN-------THIPLAAEMPHGGFKQSGYG 431
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 6e-73
Identities = 152/481 (31%), Positives = 236/481 (49%), Gaps = 21/481 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPLWKR 75
F DG S K + I NP T + V + T+ +V+ V +A A S WAKT +R
Sbjct: 3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62
Query: 76 AELLHKAAAILKEQKAPIAE----CLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131
+L + A ++++ +A+ C K I EV +S + + Y A +I G
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSIHL---SRAFEVGQSANFLRYFAGWATKING 119
Query: 132 EGKLLVSDSFPGNERTKY-CLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
E ++ S P + +Y T + P+GVV I P+N+ V +AV KI AL G +IV+K
Sbjct: 120 E---TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P + L + AG P G+++ V GKG +G L HP + +SFTG TG
Sbjct: 177 PSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKG-AVGAQLISHPDVAKVSFTGSVATGKK 235
Query: 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
I ++A + + +ELGGK+A L+DAD+D ++ GF + GQ C A + V S
Sbjct: 236 IGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRS 295
Query: 308 VADTLVEKVKAKVAKLTVGAPEDDCD-ITPVVTESSANFIEGLVMDAKQKAATFC---QE 363
D LV K+K ++ VG+P D+ P+ + + + + DA+ + +
Sbjct: 296 KFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEA 355
Query: 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
EG + P L+ D R+ EE FGPV+ + EE I N + FGL V+T
Sbjct: 356 LAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWT 415
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
+++KA+ +E GTV +N P PF G+K SGIG + + I+ T++KS +
Sbjct: 416 NNLSKALRYIPRIEAGTVWVNMHTFLDPA-VPFGGMKQSGIGREFGSAFIDDYTELKSVM 474
Query: 484 I 484
I
Sbjct: 475 I 475
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 2e-72
Identities = 159/469 (33%), Positives = 237/469 (50%), Gaps = 27/469 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-----QKSWAK 69
+ F G WR+ GK + ++NP T + + A T E+V+ VE A+ A K WA+
Sbjct: 9 QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68
Query: 70 TPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRI 129
T RA+ L AA + E+K+ +A+ + KP +A ++ Y A+ +
Sbjct: 69 TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEAL 128
Query: 130 LGEGKLLVS---DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
+ K VS ++F G K PLGVV I P+NYP+ +A K+APAL AG +
Sbjct: 129 DAKQKAPVSLPMETFKGYVL-------KEPLGVVGLITPWNYPLLMATWKVAPALAAGCT 181
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
VLKP +V L + G P G+++ VTG G+E G L HP ++ I+FTG
Sbjct: 182 AVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241
Query: 246 TGISI-SKKAGMI-PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
TG I + A M+ P+ +ELGGK I+ +D DLD A + G F +GQ C+A L
Sbjct: 242 TGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLL 301
Query: 304 VMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
V E +A +EK+ + + P E+ C + PVV+E + + AK + AT
Sbjct: 302 VHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILC 361
Query: 363 EYKR-----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
KR +G I P ++ +V M+I EE FGPVL V ++ +E I N S++GL
Sbjct: 362 GGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGL 421
Query: 418 QGCVFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIG 465
G V + D+ + +S+A + G V IN S P P+ G+K SG G
Sbjct: 422 AGAVISNDLERCERVSEAFQAGIVWINCSQPCF--CQAPWGGIKRSGFG 468
|
Length = 503 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 237 bits (605), Expect = 2e-72
Identities = 141/477 (29%), Positives = 231/477 (48%), Gaps = 15/477 (3%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+G W +++G+ + + NP V +E ++ A A +W +RA
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA 73
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L + ++ E + +A + E KP +A E+ + + + AEEG RI G
Sbjct: 74 NILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG----- 128
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D+ PG++ K + K P+GV AI P+N+P + K PAL AG ++VLKP +Q
Sbjct: 129 --DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTP 186
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
+AL + AG P G+ + VTG +G LT +P + +SFTG + G + ++
Sbjct: 187 FSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246
Query: 256 --MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ + +ELGG I+ +DADLD A + F +GQ C V + V D
Sbjct: 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 306
Query: 314 EKVKAKVAKLTVG-APEDDCDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGN 369
EK++ V+KL +G E I P++ E + +E + DA +K A + ++ GN
Sbjct: 307 EKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGN 366
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
P +L +V + ++A EE FGP+ P+ R + I N + FGL + RD+++
Sbjct: 367 FFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRV 426
Query: 430 ILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
+ +A+E G V IN+ + PF G+K SG+G +G I +IK I L
Sbjct: 427 FRVGEALEYGIVGINTGIISN-EVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 482
|
Length = 482 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 5e-72
Identities = 149/480 (31%), Positives = 237/480 (49%), Gaps = 20/480 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPL 72
K F +G + ++SGK+ I+P + V E+V++ V+ A+ A + W +
Sbjct: 5 KLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTG 64
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILG 131
++R+ +L + A +L++ +A + KP + A EV + L Y A +I G
Sbjct: 65 YERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHG 124
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
+ P + + T P+GVV I P+N+P+ + K+ PAL GN+IVLKP
Sbjct: 125 M-------TLPADG-PHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKP 176
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250
Q ++AL AG P G+++ VTG G G + H ++ ++FTG + G I
Sbjct: 177 AEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKII 236
Query: 251 ---SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
+ K+ + P+ +ELGGK I+ EDAD+D A F GQ C A V ES
Sbjct: 237 MQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHES 296
Query: 308 VADTLVEKVKAKVAKLTVGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR 366
+ D VEK KA+ K VG P + P V + I + K++ AT R
Sbjct: 297 IYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDR 356
Query: 367 EGN---LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
G+ I P + +V+ DM+IA +E FGPV +++ +V+E I N S +GL VF+
Sbjct: 357 IGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFS 416
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
++I+ A +S A++ GTV +N PF G K SGIG + ++N ++K+ V
Sbjct: 417 KNIDTANTLSRALKAGTVWVNCYDVFDAS-IPFGGYKMSGIGREKGIYALNNYLQVKAVV 475
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 3e-71
Identities = 148/473 (31%), Positives = 221/473 (46%), Gaps = 41/473 (8%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
K +G + G+ + NP T + + + +V+ V A A W++T
Sbjct: 3 TKLLINGELV-AGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPK 61
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
+RAE L K A ++E A KP A+ E+ D+ + A R L E
Sbjct: 62 ERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAG-AARCL-E 119
Query: 133 GKLLVSDSFPGNERTKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
GK + G+ TS I P+GVV +I P+NYP+ +A K+APAL AGN++VL
Sbjct: 120 GKA-AGEYLEGH-------TSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVL 171
Query: 190 KPPTQGAVAALHMVHCFHLAG--FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
KP + AL + LA P G+++ VTG+G+ +GD L HP + +S TG T
Sbjct: 172 KPSEITPLTALKLAE---LAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIAT 228
Query: 247 GISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
G + A + +ELGGK I+ +DADLD I G+ +GQ CTA
Sbjct: 229 GKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYA 288
Query: 305 MESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQ----KAAT 359
+ D LV K+ A VA L VG P+D D ++ P+++ + + + G V AK + T
Sbjct: 289 QRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVT 348
Query: 360 FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+ +G P LL R D I E FGPV+ V + ++ + N S++GL
Sbjct: 349 GGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLAS 408
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHF------PFQGLKDSGIGS 466
V+TRD+ +A +S ++ G +N HF P G K SG G
Sbjct: 409 SVWTRDVGRAHRVSARLQYGCTWVN-------THFMLVSEMPHGGQKQSGYGK 454
|
Length = 475 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 8e-71
Identities = 148/441 (33%), Positives = 228/441 (51%), Gaps = 28/441 (6%)
Query: 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104
V A T E+V++ + A+ AQ+ WAKT +R ++L + E + I ++ K
Sbjct: 12 VPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKT 71
Query: 105 AKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKI---PLGVV 160
DA E++ + + + + + G + L +S PG Y +++ PLGVV
Sbjct: 72 MVDASLGEILVTCEKIRWTLKHGEKALRP------ESRPGGLLMFY-KRARVEYEPLGVV 124
Query: 161 LAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAA---LHMVH-CFHLAGFPKGLI 216
AI +NYP + + I AL AGN+IV+K Q A ++ L ++ C G L+
Sbjct: 125 GAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLV 184
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIILE 273
VT E + LT HP I+ I+F G G + A + P+ +ELGGKD I+L+
Sbjct: 185 QLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLD 243
Query: 274 DADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DC 332
DADLD A+ I++G F SGQ C ++ +V E + D L+E + +V L G P D D
Sbjct: 244 DADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDV 303
Query: 333 DITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-------EGNLIWPLLLDNVRPDMRI 385
D+ +++ + + +E LV DA +K A KR +G+ P LL +V PDM+I
Sbjct: 304 DVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKI 363
Query: 386 AWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445
A EE FGPV+ V++ + EE + N++ +GL VF +DI +A I+ +ETG V IN
Sbjct: 364 AQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAIND 423
Query: 446 -APSRGPDHFPFQGLKDSGIG 465
+ PF G+K SG G
Sbjct: 424 FGVNYYVQQLPFGGVKGSGFG 444
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 2e-68
Identities = 148/464 (31%), Positives = 228/464 (49%), Gaps = 30/464 (6%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ F +G W K + KS INP T + V +E+V+ V A+ A +SW+ P
Sbjct: 22 FGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGH 81
Query: 74 KRAELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131
RA L++ A +++ + A E L KP ++ R D + A G
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDN--GKPIRE-----SRDCD-IPLVARHFYHHAG 133
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
+LL ++ G + P+GVV I P+N+P+ + KI PAL GN++VLKP
Sbjct: 134 WAQLLDTE-LAGWK----------PVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKP 182
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250
+ AL AG P G+++ VTG GS G L HP ++ ++FTG + G ++
Sbjct: 183 AEYTPLTALLFAEICAEAGLPPGVLNIVTGNGS-FGSALANHPGVDKVAFTGSTEVGRAL 241
Query: 251 SKK-AGMIP-LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV 308
+ AG L +ELGGK I+ +DADLD A IV + GQ C A LV ESV
Sbjct: 242 RRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESV 301
Query: 309 ADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ---EY 364
A+ L+ K+K +++ L VG P D D+ +V + I LV + + + A Q +
Sbjct: 302 AEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL 361
Query: 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
+G P L NV P RIA EE FGPVL V+ + +E + N + +GL V++
Sbjct: 362 PSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSE 421
Query: 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
+++ A+ ++ +++ G V IN F G ++SG G +G
Sbjct: 422 NLSLALEVALSLKAGVVWINGHNLFDAAA-GFGGYRESGFGREG 464
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 2e-68
Identities = 127/395 (32%), Positives = 193/395 (48%), Gaps = 16/395 (4%)
Query: 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138
L K AA ++E+ + I+ +V+E K + A EV + D + Y AE R EG+++ S
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRY--EGEIIQS 58
Query: 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198
D E L K LGV I P+N+P L K+APAL+ GN+IV+KP
Sbjct: 59 DR--PGENI---LLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNN 113
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG-- 255
A+ G PKG+ + V G+G +G L +P + +S TG G I A
Sbjct: 114 AIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKN 173
Query: 256 MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEK 315
+ + +ELGGK I+++DADLDLA IV SGQ C + V + + D V +
Sbjct: 174 ITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 233
Query: 316 VKAKVAKLTVGAP--EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GNL 370
+ + + G P +D + P++ ++ +E V A ++ A K G
Sbjct: 234 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 293
Query: 371 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 430
P LL +VR +M I EE FGPVLPV+ +++EE I N S++GL ++T+++N A+
Sbjct: 294 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAM 353
Query: 431 LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
++ G IN F G + SGIG
Sbjct: 354 KAIKGLKFGETYINRENFEAMQGF-HAGWRKSGIG 387
|
Length = 409 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 7e-65
Identities = 129/445 (28%), Positives = 207/445 (46%), Gaps = 23/445 (5%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKA 91
I+P T + E + A+ A WA P RA +L + A +
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDPR-LRARVLLELADAFEANAE 60
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCL 151
+A L E K +A E+ + + Y A G + + PG+ + L
Sbjct: 61 RLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGR----MIEPEPGS----FSL 112
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH-LAG 210
+ P+GV I P+N PV L V +APAL AG ++V+KP Q A ++ +
Sbjct: 113 VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPS 172
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKD 267
P G+++ T GSE L P ++ ISFTG TG +I A + L +ELGGK
Sbjct: 173 LPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKT 232
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG- 326
CI+ +DADLD A + + ++GQ C A LV S+AD + +++ A++A + VG
Sbjct: 233 PCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGP 292
Query: 327 APEDDCDITPVVTESSANFIEGLVMDAKQKAATFC------QEYKREGNLIWPLLLDNVR 380
+ D+ P++ ++ + ++ +V A A E +G + P LL+
Sbjct: 293 GLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDD 352
Query: 381 PDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGT 440
PD I EE FGPVL + + E + N +++GL V+TRD+ +A+ ++ A+ GT
Sbjct: 353 PDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGT 412
Query: 441 VQINSAPSRGPDHFPFQGLKDSGIG 465
V IN ++ G + SG+G
Sbjct: 413 VWINDW-NKLFAEAEEGGYRQSGLG 436
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 2e-63
Identities = 148/489 (30%), Positives = 230/489 (47%), Gaps = 28/489 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTP 71
++ F +G + + GK+ INPT +V T E+V++ V AK A W K
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV------TEVVRSGDLVSYCAEE 125
R L+++ A +++E + +A I AV T V S Y A
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELAT-----IESLDSGAVYTLALKTHVGMSIQTFRYFAGW 120
Query: 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185
+I G+ + ++ + P LT + P+GV + P+NYP+ + K+A L AGN
Sbjct: 121 CDKIQGK-TIPINQARPNR---NLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGN 176
Query: 186 SIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG- 244
++VLKP + AL AGFPKG+I+ + G GS +G L+ HP + + FTG
Sbjct: 177 TVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGST 236
Query: 245 DTGISISKKAGMIPLQ---MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
G I K + L+ +ELGGK II D D+D A + F G+ C A
Sbjct: 237 PIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGR 296
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATF 360
V ES+ D V +V +V K+ +G P D D P ++ + + ++ AT
Sbjct: 297 LFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATL 356
Query: 361 C---QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS--VEEGIHHCNASNF 415
++ R G P + +V M IA EE FGP++ + + + V+ + N + +
Sbjct: 357 VYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEY 416
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475
GL VFT+DINKA+ +SD +E GTV +N+ ++ PF G K SG G ++N
Sbjct: 417 GLASGVFTKDINKALYVSDKLEAGTVFVNTY-NKTDVAAPFGGFKQSGFGKDLGEEALNE 475
Query: 476 MTKIKSTVI 484
K K+ I
Sbjct: 476 YLKTKTVTI 484
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 5e-63
Identities = 137/467 (29%), Positives = 221/467 (47%), Gaps = 30/467 (6%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
+ G + + +SG + + NP T + +V + +EV+ V +A+ +W +T L +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQ 61
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R +L + A+LKE + IAE + E K DA+ +V R ++V + + GE
Sbjct: 62 RTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGE-- 119
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
+ + + PLGV I PFN+P + + A+ GN+ VLKP +
Sbjct: 120 -----TSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEK 174
Query: 195 GAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG--------DT 246
AA+ + F AG P G+++ V G E D L HP + +SF G T
Sbjct: 175 VPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT 233
Query: 247 GISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
G + K+ +Q G K+ +++ DAD D AA +V + +GQRC A+ A V+
Sbjct: 234 GSAHGKR-----VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLV 287
Query: 307 SVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQE-- 363
AD V +++ + K+ +G +D ++ P++T + + + L+ + A +
Sbjct: 288 GAADEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR 347
Query: 364 -YK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
YK EGN + P LL+ V P M+ EE FGPVL V+ +++EE I NAS +G
Sbjct: 348 GYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNG 407
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+FTRD A +E G V +N +F F G KDS G
Sbjct: 408 TAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG 454
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 8e-63
Identities = 125/432 (28%), Positives = 200/432 (46%), Gaps = 23/432 (5%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111
E +E A A K+W P RA LL KAA +L+ ++ + L E+ K +A+ +
Sbjct: 56 EAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDD 115
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171
V + D + Y A +R+ +V NE + + LG + I P+N+PV
Sbjct: 116 VAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNE------SFYVGLGAGVVISPWNFPVA 169
Query: 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLT 231
+ I + GN+++ KP V + FH AGFP G++ + G G E+G +LT
Sbjct: 170 IFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLT 229
Query: 232 MHPSINCISFTGG-DTGISISKKAG--------MIPLQMELGGKDACIILEDADLDLAAA 282
H I I+FTG +TG I + A L +E GGK+A I+ E AD +L
Sbjct: 230 EHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVE 289
Query: 283 NIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTES 341
+V F + GQ+C+A ++ + + ++E++ + +L+VG P E+ D+ PV+
Sbjct: 290 GVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAE 349
Query: 342 SANFIEGLVMDAKQKAATFCQEYKREGN--LIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399
+ + K + + EG + P +++ V P RIA EE FGPVL VIR
Sbjct: 350 QEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIR 409
Query: 400 INSVE--EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP--DHFP 455
+ E + N++ +GL G V++R G + IN G P
Sbjct: 410 YKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRK-ITGALVGVQP 468
Query: 456 FQGLKDSGIGSQ 467
F G K SG ++
Sbjct: 469 FGGFKLSGTNAK 480
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 1e-62
Identities = 138/443 (31%), Positives = 206/443 (46%), Gaps = 14/443 (3%)
Query: 30 SVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQ 89
+ INP T + A T +EV+ + A + + T +RA + AA +L+ +
Sbjct: 2 PIATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAE 61
Query: 90 KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKY 149
+A + E+ K A E ++ Y AE +L + + +Y
Sbjct: 62 ADQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRY 121
Query: 150 CLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA 209
PLGVVLA+ P+N+P+ V APAL+AGN +LK + AL++ F A
Sbjct: 122 -----QPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176
Query: 210 GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGK 266
GFP G + + L P + + TG + G +++ AG + +ELGG
Sbjct: 177 GFPDGCFQTLLVGSGAVEAILR-DPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGS 235
Query: 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326
D I++ ADLD AA V +GQ C A K +V V D EK A++A L VG
Sbjct: 236 DPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVG 295
Query: 327 APEDD-CDITPVVTESSANFIEGLVMDAKQKAAT-FCQEYKREGNLIW--PLLLDNVRPD 382
P D D+ P+ TE + +E V DA AT C + +G + P ++ ++ PD
Sbjct: 296 DPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPD 355
Query: 383 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQ 442
MR+ EE FGPV + R+ ++E I NA+ FGL +TRD + D +E G V
Sbjct: 356 MRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVF 415
Query: 443 INSAPSRGPDHFPFQGLKDSGIG 465
IN P+ PF G+K SG G
Sbjct: 416 INGMTVSYPE-LPFGGVKRSGYG 437
|
Length = 457 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 4e-62
Identities = 142/497 (28%), Positives = 237/497 (47%), Gaps = 49/497 (9%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAK--LAQKSWAKTPL 72
+ F +G + ++ ++ ++P T+ P ++ ++++ V A+ + W+ +
Sbjct: 21 RLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSP 80
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK----DAVTEVVRSGDLVSYCAEEGVR 128
KR +L+K A +++ +A + KP + D + R+ + + AE +
Sbjct: 81 AKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARA---IRWYAEAIDK 137
Query: 129 ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
+ GE S R P+GV+ AI P+N+P+ L K+ PAL AGNS++
Sbjct: 138 VYGEVATTSSHELAMIVRE--------PVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVI 189
Query: 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TG 247
LKP + ++A+ + AG P G+++ VTG G E G L+ H I+ I+FTG TG
Sbjct: 190 LKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTG 249
Query: 248 ISISKKAG---MIPLQMELGGKDACIILEDA-DLDLAAANIVKGGFSYSGQRCTAVKVAL 303
+ K AG M + +E GGK A I+ D DL AA+ G F GQ C A L
Sbjct: 250 KQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLL 309
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQ--KAATFC 361
+ ES+AD + +K + G P D P T G ++D +F
Sbjct: 310 LEESIADEFLALLKQQAQNWQPGHPLD-----PATT-------MGTLIDCAHADSVHSFI 357
Query: 362 QEYKREGNL------------IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHH 409
+E + +G L I P + +V P+ ++ EE FGPVL V R S E+ +
Sbjct: 358 REGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQL 417
Query: 410 CNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGI 469
N S +GL V+TRD+++A +S ++ G+V +N+ + G PF G K SG G
Sbjct: 418 ANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNY-NDGDMTVPFGGYKQSGNGRDKS 476
Query: 470 TNSINMMTKIKSTVINL 486
+++ T++K+ I+L
Sbjct: 477 LHALEKFTELKTIWISL 493
|
Length = 494 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 1e-60
Identities = 137/461 (29%), Positives = 229/461 (49%), Gaps = 13/461 (2%)
Query: 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAK---LAQKSWAKTPLWKRAELLHKAAAILK 87
+ ++NP KP V ++K ++TA L + +W P +R +L + A +++
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLME 58
Query: 88 EQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERT 147
E+ +A + +E KP DA EV R+ D V A+E + LG ++ + + R
Sbjct: 59 ERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADE-LGQLGGREIPMGLTPASAGRI 117
Query: 148 KYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH 207
+ T++ P+GVV+AI FN+P+NL V ++APA+ AG +++KP ++ L V H
Sbjct: 118 AF--TTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLH 175
Query: 208 LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISI-SKKAGMIPLQMELGG 265
AG P+G V + + + + L P + SF G G + SK A +E GG
Sbjct: 176 EAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGTRCALEHGG 234
Query: 266 KDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325
I+ ADLD +VKGGF ++GQ C +V+ V +AD +++ A KL V
Sbjct: 235 AAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVV 294
Query: 326 GAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN-LIWPLLLDNVRPDM 383
G P D D ++ P++ + +E V +A A KR + P +L + D
Sbjct: 295 GDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDA 354
Query: 384 RIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQI 443
+++ +E FGPV+ V + ++E I N+ Q VFT+D++ A+ ++ V +
Sbjct: 355 KVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMV 414
Query: 444 NSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
N + D PF G + SG G+ GI +++ MT+ K VI
Sbjct: 415 NDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 1e-60
Identities = 122/439 (27%), Positives = 189/439 (43%), Gaps = 55/439 (12%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111
+V+ V A+ A WA L +RA +L + A +LK K +A + +E KP +A TE
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171
V + + GE ++ G ++ P GV+ PFN+P +
Sbjct: 61 VAAMAGKIDISIKAYHERTGERATPMAQ---GRAVLRHR-----PHGVMAVFGPFNFPGH 112
Query: 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLT 231
L I PAL+AGN++V KP A MV + AG P G+++ V G G E G+ L
Sbjct: 113 LPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALA 171
Query: 232 MHPSINCISFTGG-DTGISISKKAGMIP---LQMELGGKDACIILEDADLDLAAANIVKG 287
H I+ + FTG TG+ + ++ P L +E+GG + ++ + AD+D AA IV+
Sbjct: 172 AHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS 231
Query: 288 GFSYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFI 346
F +GQRCT + +V + V D +E++ +L +GAP D +
Sbjct: 232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAP--DAEPPF--------MG 281
Query: 347 EGLVMDAKQKAATFCQEYKREG--------------NLIWPLLLD----NVRPDMRIAWE 388
++ A + Q+ G + P ++D PD E
Sbjct: 282 PLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPD-----E 336
Query: 389 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV----QIN 444
E FGP+L V R + +E I NA+ FGL + + D + G V
Sbjct: 337 EIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTT 396
Query: 445 SAPSRGPDHFPFQGLKDSG 463
A S PF G+ SG
Sbjct: 397 GASST----APFGGVGLSG 411
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 1e-59
Identities = 147/496 (29%), Positives = 226/496 (45%), Gaps = 38/496 (7%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPL 72
+ F +G + SGK+ INP + RV EV+ V A+ A K W K +
Sbjct: 1 IRNFINGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTV 58
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSG--------DLVSYCAE 124
+RA+LL+ A ++ + V + KP A + G D+V
Sbjct: 59 AERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPT 118
Query: 125 EGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAG 184
E + G Y + PLGVV I P+N P+ L K+ PAL G
Sbjct: 119 ECFE---------MATPDGKGALNY--AVRKPLGVVGVISPWNLPLLLMTWKVGPALACG 167
Query: 185 NSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKG-SEIGDFLTMHPSINCISFTG 243
N++V+KP + A + + G PKG+ + V G G G+FLT HP ++ I+FTG
Sbjct: 168 NTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTG 227
Query: 244 -GDTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVK 300
TG +I K A G+ P+ ELGGK+A I+ D D D A A I++ F +GQ C +
Sbjct: 228 ETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTE 287
Query: 301 VALVMESVADTLVEKVKAKVAKLTVGAPEDD-CDITPVVTESSANFIEGLVMDAKQKAAT 359
V + D V +KA+ L +G P+D ++ P+++ + + A ++ AT
Sbjct: 288 RVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT 347
Query: 360 FCQ--------EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411
+ G + P + + R+ EE FGP + +S EE I N
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 412 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGSQGIT 470
+ +GL V+T D+++A ++ ME G V +NS R D PF G K SGIG +G
Sbjct: 408 DTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGV 465
Query: 471 NSINMMTKIKSTVINL 486
+S+ T++ + I L
Sbjct: 466 HSLEFYTELTNVCIKL 481
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 8e-59
Identities = 151/492 (30%), Positives = 239/492 (48%), Gaps = 28/492 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPL 72
+ +G + ++SGK+ ++P T + V E+VN+ V A+ A + W K
Sbjct: 59 QLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTA 118
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRILG 131
++R+ +L + A +L++ +A + KP + A E+ L Y A +I G
Sbjct: 119 YERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHG 178
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
L V P + +T + P+GV I P+N+P+ + K+ PAL GN+IVLK
Sbjct: 179 ---LTVPADGPHHVQTLH-----EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 230
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG--- 247
Q ++AL+ H AG P G+++ V+G G G L H ++ ++FTG DTG
Sbjct: 231 AEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 290
Query: 248 ISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
+ ++ K+ + P+ +ELGGK I+ EDAD+D A F GQ C A V E
Sbjct: 291 LELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHER 350
Query: 308 VADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC---QE 363
V D VEK KA+ K VG P + + P + I + + AT
Sbjct: 351 VYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDR 410
Query: 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
+ +G I P + NV+ DM IA +E FGPV +++ ++E I N + +GL VFT
Sbjct: 411 FGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFT 470
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHF----PFQGLKDSGIGSQGITNSINMMTKI 479
++++ A +S A+ GTV +N D F PF G K SGIG + S+N ++
Sbjct: 471 QNLDTANTLSRALRVGTVWVNCF-----DVFDAAIPFGGYKMSGIGREKGIYSLNNYLQV 525
Query: 480 KSTVINLPTPSY 491
K+ V L P++
Sbjct: 526 KAVVTPLKNPAW 537
|
Length = 538 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 1e-58
Identities = 147/484 (30%), Positives = 238/484 (49%), Gaps = 20/484 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTPL 72
K F +G + ++SGK+ +P T + R+ +E+V+ V+ A+ A W +
Sbjct: 22 KLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSG 81
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAK-PAKDAVTEVVRSGDLVSYCAEEGVRILG 131
++R ++ K A +++E +A + K A ++ + L+ Y A +I G
Sbjct: 82 FERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHG 141
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
E L +S G T K P+GVV I P+N+P + K+APAL AG ++V+KP
Sbjct: 142 E-TLKMSRQLQG-------YTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKP 193
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250
Q ++AL H LAG P G+I+ VTG G G + H ++ +SFTG + G I
Sbjct: 194 AEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKI 253
Query: 251 SKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
+ A + + +ELGGK +I +DAD+D+A + G F G+ C A V E
Sbjct: 254 MQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEG 313
Query: 308 VADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK- 365
+ D V+K+ K VG P D P V + I + K++ AT K
Sbjct: 314 IYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKP 373
Query: 366 --REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
+G I P + +V DM+IA +E FGPV+ +++ +VEE I N + +GL + T
Sbjct: 374 CGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVT 433
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
+D++ A +S ++ GT+ +N + PD PF G K SG G ++++ ++KS V
Sbjct: 434 KDLDVANTVSRSIRAGTIWVNCYFAFDPD-CPFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
Query: 484 INLP 487
L
Sbjct: 493 TPLY 496
|
Length = 501 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 3e-58
Identities = 150/472 (31%), Positives = 222/472 (47%), Gaps = 41/472 (8%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+K +G S G+ + NP T + + + E+V+ V A A W +T
Sbjct: 2 HKLLINGEL-VSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPK 60
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
RAE L K A +++E AE + KP E+ D+ + A + G
Sbjct: 61 ARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG- 119
Query: 133 GKLLVSDSFPGNERTKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
L + G+ TS I PLGVV +I P+NYP+ +A K+APAL AGN +VL
Sbjct: 120 --LAAGEYLEGH-------TSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVL 170
Query: 190 KPPTQGAVAALHMVHCFHLAG--FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
KP + AL + LA FP G+++ + G+G +GD LT H + +S TG T
Sbjct: 171 KPSEITPLTALKLAE---LAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIAT 227
Query: 247 GISI-SKKAGMIP-LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
G I S A I MELGGK I+ +DAD+D + GF +GQ CTA
Sbjct: 228 GEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYA 287
Query: 305 MESVADTLVEKVKAKVAKLTVGAPEDD-CDITPVVTESSANFIEGLVMDAKQ----KAAT 359
+ DTLVEK+ A VA L GAP+D+ ++ P+ + + + V +AK K T
Sbjct: 288 QRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVIT 347
Query: 360 FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
++ K G P LL + D I +E FGPV+ + + E+ ++ N S +GL
Sbjct: 348 GGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLAS 407
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHF------PFQGLKDSGIG 465
V+T+D+ +A +S ++ G +N+ HF P G K SG G
Sbjct: 408 SVWTKDVGRAHRLSARLQYGCTWVNT-------HFMLVSEMPHGGQKLSGYG 452
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 2e-57
Identities = 123/431 (28%), Positives = 206/431 (47%), Gaps = 61/431 (14%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G W G++ NP + + ++ T +V+ V A+ A +WA+ +R
Sbjct: 4 WINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQ 62
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
++ + AA+L+E K +AE + +E KP +A TEV ++ K+
Sbjct: 63 AIVERFAALLEENKEELAEVIARETGKPLWEAATEV---TAMI-------------NKIA 106
Query: 137 VS-DSFPGNERT----------KYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185
+S ++ +ERT L + P GVV P+N+P +L I PAL+AGN
Sbjct: 107 ISIQAY--HERTGEKRSEMADGAAVLRHR-PHGVVAVFGPYNFPGHLPNGHIVPALLAGN 163
Query: 186 SIVLKPPTQG-AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG- 243
++V KP VA L V + AG P G+++ V G G E G L HP I+ + FTG
Sbjct: 164 TVVFKPSELTPWVAEL-TVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGS 221
Query: 244 GDTGISISKKAGMIP---LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVK 300
+TG + ++ P L +E+GG + +I E AD+D A I++ F +GQRCT +
Sbjct: 222 ANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCAR 281
Query: 301 VALVMESV-ADTLVEKVKAKVAKLTVGAPEDDCD--ITPVVTESSANFIEGLVMDAKQK- 356
LV + D + ++ A +LTVG + + + V++E +A + + A+ +
Sbjct: 282 RLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGL----VAAQAQL 337
Query: 357 ----AATFCQEYKREGN--LIWPLLLD--NV--RPDMRIAWEEPFGPVLPVIRINSVEEG 406
+ + + + L+ P ++D V PD EE FGP+L V+R + +E
Sbjct: 338 LALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPD-----EEYFGPLLQVVRYDDFDEA 392
Query: 407 IHHCNASNFGL 417
I N + FGL
Sbjct: 393 IRLANNTRFGL 403
|
Length = 487 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 2e-57
Identities = 130/432 (30%), Positives = 211/432 (48%), Gaps = 38/432 (8%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
YDG W G VT I+P +P RV+ T E+ ++ A+ A K W P KR
Sbjct: 2 VYDGEWG--GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRG 59
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
E++ + L+++K + + + E+ K + + EV D+ + A R L G +
Sbjct: 60 EIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDF-AVGLSRQLY-GLTI 117
Query: 137 VSDSFPGNERTKYCLTSKI-PLGVVLAIPPFNYPV-----NLAVSKIAPALIAGNSIVLK 190
S ER + + + PLGVV I FN+PV N A+ AL+ GN +V K
Sbjct: 118 PS------ERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI-----ALVCGNVVVWK 166
Query: 191 P-PTQG--AVAALHMV-HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-- 244
P PT A+A +V G P + S V G G+++G+ L P + +SFTG
Sbjct: 167 PSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTA 225
Query: 245 ---DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
G +++ + G L ELGG +A I++EDADLDLA ++ +GQRCT +
Sbjct: 226 VGRQVGQAVAARFGRSLL--ELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRR 283
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF 360
+V ES+ D ++E++K ++ +G P +D + P+ T+++ + + +AK + T
Sbjct: 284 LIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTV 343
Query: 361 C---QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
+ GN + P +++ D I EE F P+L V++ +++EE I N GL
Sbjct: 344 LFGGKVIDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGL 402
Query: 418 QGCVFTRDINKA 429
+FT D+ A
Sbjct: 403 SSSIFTTDLRNA 414
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 1e-50
Identities = 143/478 (29%), Positives = 213/478 (44%), Gaps = 40/478 (8%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
Y F G W G+ I P T K V T E++ ++ A A+++W KT +
Sbjct: 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVA 60
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGE 132
+RA +L+K A ++ +A + KP ++ + ++ + D Y A G E
Sbjct: 61 ERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFA--GCIRAQE 118
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
G + D Y PLGVV I P+N+P+ +A K+APAL AGN +VLKP
Sbjct: 119 GSISEIDE----NTVAYHFHE--PLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPA 172
Query: 193 TQGAVAALHMVHCFHLAG--FPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGIS 249
Q + L ++ L G P G+++ V G G E G L I ++FTG TG
Sbjct: 173 EQTPASILVLM---ELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRL 229
Query: 250 ISKKA--GMIPLQMELGGKDACIILE------DADLDLAAANIVKGGFSYSGQRCTAVKV 301
I + A +IP+ +ELGGK I DA D A V + G+ CT
Sbjct: 230 IMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALN-QGEVCTCPSR 288
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLV--MD-AKQKAA 358
AL+ ES+ D +E+ +V + G P D T + ++S +E ++ +D K++ A
Sbjct: 289 ALIQESIYDRFMERALERVKAIKQGNPLD--TETMIGAQASLEQLEKILSYIDIGKEEGA 346
Query: 359 TFC---QEYKREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 410
+ + G L + + MRI EE FGPVL V EE +
Sbjct: 347 EVLTGGERNELGGLLGGGYYVPTTFKGGNK--MRIFQEEIFGPVLAVTTFKDEEEALEIA 404
Query: 411 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQG 468
N + +GL V+TRD N A + ++ G V N P H F G K SGIG +
Sbjct: 405 NDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY-PAHAAFGGYKQSGIGREN 461
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 178 bits (452), Expect = 2e-50
Identities = 125/445 (28%), Positives = 197/445 (44%), Gaps = 25/445 (5%)
Query: 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93
+NP T + + +++ ++ A + W +T + RA+ L L+ + +
Sbjct: 12 VNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEM 71
Query: 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
A+ + +E+ KP A EV +S +L + AE G +L LV E + +
Sbjct: 72 AQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLV-------ENQQAVIEY 124
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213
+ PLG +LAI P+N+P+ + P L+AGN +LK A + F AG P+
Sbjct: 125 R-PLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQ 183
Query: 214 GLISCVT----GKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGK 266
G+ + G I D I ++ TG G +I +AG + +ELGG
Sbjct: 184 GVYGWLNADNDGVSQMIND-----SRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGS 238
Query: 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326
D I+L DADL+LA V G + +GQ C A K ++ E +A E+ A A L +G
Sbjct: 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMG 298
Query: 327 APEDD-CDITPVVTESSANFIEGLVMDAKQKAATFC---QEYKREGNLIWPLLLDNVRPD 382
P D+ + P+ + + V + A ++ GN P +L NV P+
Sbjct: 299 DPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPE 358
Query: 383 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQ 442
M EE FGPV + E + N S FGL +FT D +A ++ +E G V
Sbjct: 359 MTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVF 418
Query: 443 INSAPSRGPDHFPFQGLKDSGIGSQ 467
IN + F G+K SG G +
Sbjct: 419 INGYCASDA-RVAFGGVKKSGFGRE 442
|
Length = 462 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 6e-48
Identities = 123/426 (28%), Positives = 202/426 (47%), Gaps = 51/426 (11%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG WR + G+S + NP T++ ++ A + +V V A+ A +WA+ L +R
Sbjct: 2 FIDGKWR-AGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI 60
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLV-----SYCAEEGVR--I 129
++ + AA+L+E+K +A + +E KP + TEV V +Y G
Sbjct: 61 AVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP 120
Query: 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189
+ +G+ ++ R + P GVV P+N+P +L I PAL+AGN++V
Sbjct: 121 MPDGRAVL--------RHR-------PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVF 165
Query: 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGI 248
KP A V + AG P G+++ V G E G L HP I+ + FTG +TG
Sbjct: 166 KPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGH 224
Query: 249 SISKKAGMIP---LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVM 305
+ ++ P L +E+GG + I+ E AD+D A I++ F +GQRCT + LV
Sbjct: 225 LLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVP 284
Query: 306 ESV-ADTLVEKVKAKVAKLTVGAPEDDCD--ITPVVTESSANFIEGLVMDAKQK-----A 357
+ D + ++ +LTVGA + + + V++ +A ++ A+ K
Sbjct: 285 DGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAA----QRLLAAQAKLLALGG 340
Query: 358 ATFCQEYKREGN--LIWPLLLD----NVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411
+ + + L+ P ++D PD EE FGP+L VIR + +E I N
Sbjct: 341 KSLLAMRQLDPGAALLTPGIIDVTGVAELPD-----EEHFGPLLQVIRYDDFDEAIAIAN 395
Query: 412 ASNFGL 417
+ FGL
Sbjct: 396 NTRFGL 401
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 1e-46
Identities = 112/435 (25%), Positives = 192/435 (44%), Gaps = 41/435 (9%)
Query: 28 GKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAIL 86
G++ + NP R+ +V V +++A+ A +W TP +RA L + A +L
Sbjct: 50 GEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLL 109
Query: 87 KEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNER 146
+ + V+E K +A+ EV + D Y A++ V D
Sbjct: 110 ELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQ-----------VRDVLG-EFS 157
Query: 147 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206
+ GV + I P+N+P+ + +I+ AL AGN+++ KP Q ++ A V
Sbjct: 158 VE-------SRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELM 210
Query: 207 HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISI------SKKAGMIPLQ 260
AGFP G I + G+G+++G LT P I ++FTG + ++ +PL
Sbjct: 211 QEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLI 270
Query: 261 MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKV 320
E GG++A I+ A + ++++ F +GQRC+A++V V E VAD ++ ++ +
Sbjct: 271 AETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAM 330
Query: 321 AKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK------REGNLIWP 373
+L VG P D+ PV+ + + + Q Q + G + P
Sbjct: 331 QELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAP 390
Query: 374 LL--LDNVRPDMRIAWEEPFGPVLPVIRINSVE--EGIHHCNASNFGLQGCVFTRDINKA 429
L LD++ EE FGPVL V+R + E + + N + +GL V +R
Sbjct: 391 TLFELDDIAE----LSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTY 446
Query: 430 ILISDAMETGTVQIN 444
I G +N
Sbjct: 447 RWIEKHARVGNCYVN 461
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 171 bits (436), Expect = 3e-46
Identities = 126/438 (28%), Positives = 208/438 (47%), Gaps = 41/438 (9%)
Query: 24 KSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82
+ G+ +INP V T+ +V + +E A A W+ TP +RA +L +A
Sbjct: 122 PVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERA 181
Query: 83 AAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFP 142
A +++ Q + LV+E K +A+ EV + D + Y A + D+F
Sbjct: 182 ADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQ-----------ARDTF- 229
Query: 143 GNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202
GN + PLG V+ I P+N+P+ + +IA AL AGNS++ KP Q + A
Sbjct: 230 GNLTHR-------PLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQA 282
Query: 203 VHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI----SISKKAG-M 256
V H AG P G++ + G+G +G LT + + FTG + ++K+ G
Sbjct: 283 VRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRP 342
Query: 257 IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKV 316
IPL E GG++A I+ A + A+++ F +GQRC+A++V + E VAD ++ +
Sbjct: 343 IPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTML 402
Query: 317 KAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNL----- 370
K +A+L VG P+ D+ PV+ + IE + + + +L
Sbjct: 403 KGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHI-QTMRSKGRLVHQAAAPNSLQKGTF 461
Query: 371 IWPLL--LDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNASNFGLQGCVFTRDI 426
+ P L L+N+ R E FGPVL V+R + ++E I NA+ +GL V TR
Sbjct: 462 VAPTLIELENLDELQR----EVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRID 517
Query: 427 NKAILISDAMETGTVQIN 444
+++ G + +N
Sbjct: 518 ETIAHVTERAHAGNLYVN 535
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 170 bits (434), Expect = 1e-45
Identities = 127/431 (29%), Positives = 208/431 (48%), Gaps = 55/431 (12%)
Query: 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK 103
V E+V + + A+ A +W++TP+ +RA +L +AA +L+ +A + V+E K
Sbjct: 578 EVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGK 637
Query: 104 PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPG--NERTKYCLTSKIPLGVVL 161
+DA+ EV + D Y A + R+ G + L PG E + L + GV +
Sbjct: 638 TLQDAIAEVREAVDFCRYYAAQARRLFGAPEKL-----PGPTGESNELRLHGR---GVFV 689
Query: 162 AIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTG 221
I P+N+P+ + + ++A AL AGN+++ KP Q + A V H AG PK ++ + G
Sbjct: 690 CISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPG 749
Query: 222 KGSEIGDFLTMHPSINCISFTGG-DTGISI-----SKKAGMIPLQMELGGKDACIILEDA 275
G+ +G LT P I ++FTG +T I ++ ++PL E GG++A I+ A
Sbjct: 750 DGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTA 809
Query: 276 DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCDI 334
+ ++V F +GQRC+A++V V E +AD ++E +K +A+L VG P D+
Sbjct: 810 LPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDV 869
Query: 335 TPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDN-------VRP------ 381
PV+ +AK + KRE L+ L L V P
Sbjct: 870 GPVIDA-----------EAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFEID 918
Query: 382 ---DMRIAWEEPFGPVLPVIR-----INSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433
+ E FGP+L VIR ++ V + I NA+ +GL + +R A I+
Sbjct: 919 SISQLE---REVFGPILHVIRYKASDLDKVIDAI---NATGYGLTLGIHSRIEETADRIA 972
Query: 434 DAMETGTVQIN 444
D + G V +N
Sbjct: 973 DRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 2e-45
Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 28/326 (8%)
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHCFHLA 209
PLGVVL I P+NYP+ LA++ + A+ AGN++VLKP P A +AL LA
Sbjct: 98 PEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAP---ATSAL-------LA 147
Query: 210 -----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQM 261
F ++ V G L P + I FTG G + + A + P+ +
Sbjct: 148 KLIPKYFDPEAVAVVEGGVEVATALLA-EP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTL 205
Query: 262 ELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321
ELGGK CI+ +DA+L++AA I G F +GQ C A LV ES+ D L+E++K +
Sbjct: 206 ELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIK 265
Query: 322 KLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRP 381
+ P++ D ++ E + + L+ D K + +E I P +LD+V P
Sbjct: 266 EFYGEDPKESPDYGRIINERHFDRLASLLDDGK---VVIGGQVDKEERYIAPTILDDVSP 322
Query: 382 DMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441
D + EE FGP+LP++ + ++E I N+ L +F+ D + +G V
Sbjct: 323 DSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGV 382
Query: 442 QINSAPSR-GPDHFPFQGLKDSGIGS 466
+N + PF G+ +SG+G+
Sbjct: 383 CVNDVLLHAAIPNLPFGGVGNSGMGA 408
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 5e-45
Identities = 113/330 (34%), Positives = 159/330 (48%), Gaps = 33/330 (10%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHCFHLAGF 211
P GV L I P+NYP NLA + A+ AGN+ +LKP P AV A ++ F
Sbjct: 100 PKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIA-KIIREA----F 154
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDA 268
+ ++ G +E+ L P + I FTG G + A + + +ELGGK
Sbjct: 155 DEDEVAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSP 212
Query: 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL--TVG 326
I+ E ADL AA I G F +GQ C A V ESV D VE +KA++ K
Sbjct: 213 TIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDA 272
Query: 327 APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ--EYKREGNLIWPLLLDNVRPDMR 384
A + D+ +V + + ++GL+ DA K A ++ I P +L NV PDM+
Sbjct: 273 ARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMK 332
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD---INKAILISDAMETGTV 441
I EE FGPVLP+I ++E I + NA L VF++D +NK + +G V
Sbjct: 333 IMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVL---ARTSSGGV 389
Query: 442 QINSAPSRGPDHF-----PFQGLKDSGIGS 466
+N HF PF G+ +SGIGS
Sbjct: 390 VVNDVVL----HFLNPNLPFGGVNNSGIGS 415
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 7e-45
Identities = 110/423 (26%), Positives = 184/423 (43%), Gaps = 53/423 (12%)
Query: 25 SSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAA 83
G + ++NP V + E+V + + A+ A W+ TP +RA +L +AA
Sbjct: 563 DVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622
Query: 84 AILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPG 143
+++ + V+E K +A+ EV + D + Y A + R
Sbjct: 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARR------------LLN 670
Query: 144 NERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV 203
K PLG V+ I P+N+P+ + +IA AL+AGN+++ KP Q + A V
Sbjct: 671 GPGHK-------PLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAV 723
Query: 204 HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK-----AGMI 257
H AG PK + + G G +G L P I + FTG + I + +
Sbjct: 724 RLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPV 783
Query: 258 PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVK 317
PL E GG++A I+ A + A+++ F +GQRC+A++V + E VAD ++ +K
Sbjct: 784 PLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLK 843
Query: 318 AKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLL 376
+ +L +G P D+ PV+ +A+ + + G L+ L L
Sbjct: 844 GAMDELRIGDPWRLSTDVGPVIDA-----------EAQANIEAHIEAMRAAGRLVHQLPL 892
Query: 377 DN-------VRP------DMRIAWEEPFGPVLPVIRINS--VEEGIHHCNASNFGLQGCV 421
V P + E FGPVL V+R + ++ I NA+ +GL +
Sbjct: 893 PAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGL 952
Query: 422 FTR 424
+R
Sbjct: 953 HSR 955
|
Length = 1208 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 161 bits (407), Expect = 4e-43
Identities = 130/477 (27%), Positives = 214/477 (44%), Gaps = 26/477 (5%)
Query: 20 GVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELL 79
G + +S S + +INP T++ +V T EE V AK A W TP+ R ++
Sbjct: 120 GSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVM 179
Query: 80 HKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSD 139
K ++++ +A + E K KD+ ++ R ++V + G L + +
Sbjct: 180 LKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHAC-------GMATLQMGE 232
Query: 140 SFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAA 199
P + + PLGV I PFN+P + + A+ GN+ +LKP + A+
Sbjct: 233 YLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS 292
Query: 200 LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAGMI- 257
+ + AG P G+++ V G + + + I +SF G +T G+ I +A
Sbjct: 293 VILAELAMEAGLPDGVLNIVHGTNDTV-NAICDDEDIRAVSFVGSNTAGMHIYARAAAKG 351
Query: 258 -PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVM---ESVADTLV 313
+Q +G K+ ++L DA++D ++ GF +GQRC A+ + + +S D LV
Sbjct: 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLV 411
Query: 314 EKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------R 366
E+ KA K+T G+ E D D+ PV+++ + I L+ A + +
Sbjct: 412 ERAKA--LKVTCGS-EPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYE 468
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
+GN I P +L V PDM EE FGPVL ++ NS +E I N + +G +FT
Sbjct: 469 KGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSG 528
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNS--INMMTKIKS 481
A +E G + IN F F G K S G ++ T+IK
Sbjct: 529 AAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKL 585
|
Length = 604 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 5e-41
Identities = 110/412 (26%), Positives = 176/412 (42%), Gaps = 35/412 (8%)
Query: 71 PLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRS--------GDLVSY 121
PL R + L +L+E K +E + K++ + + +TEV+ + L Y
Sbjct: 27 PLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEY 86
Query: 122 CAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181
E V +G PG PLGVVL I +NYP+NL + +A A+
Sbjct: 87 LKPEKVDTVGV-------FGPGK-----SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAI 134
Query: 182 IAGNSIVLKPPTQGAVAALHMVHCFH---LAGFPKGLISCVTGKGSEIGDFLTMHPSINC 238
AGN++VLKP + + H + + G G E+ L P +
Sbjct: 135 AAGNTVVLKP----SELSPHTSKLMAKLLTKYLDPSYVRVIEG-GVEVTTELLKEP-FDH 188
Query: 239 ISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQR 295
I FTG G + + A + P +ELGGK I+ + +L +AA I G F +GQ
Sbjct: 189 IFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQT 248
Query: 296 CTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355
C A LV S+ D +E +K + + P+ D + +V E + L+ D
Sbjct: 249 CVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGG 308
Query: 356 KAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNF 415
K + E E + P ++ N D + EE FGP+LP++ +++E + N+
Sbjct: 309 KVV-YGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPK 367
Query: 416 GLQGCVFTRDINKAILISDAMETGTVQIN-SAPSRGPDHFPFQGLKDSGIGS 466
L F D L+ + +G V IN + PF G+ +SG+G+
Sbjct: 368 PLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGA 419
|
Length = 493 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 5e-40
Identities = 110/338 (32%), Positives = 162/338 (47%), Gaps = 16/338 (4%)
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHCFHLA 209
K PLGVVL I P+NYPV LA+S + A+ AG ++VLKP P A+ A +V
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA-ELVP----K 160
Query: 210 GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGK 266
V G E L + I +TG G I++ A + P+ +ELGGK
Sbjct: 161 YLDPDAFQVVQGGVPETTALLEQK--FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGK 218
Query: 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326
I+ ++ADL+LAA I+ G F +GQ C A LV SV D VE++K + + G
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPG 278
Query: 327 APEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIA 386
D T +V N ++ L+ K K E I P ++ +V D +
Sbjct: 279 GANASPDYTRIVNPRHFNRLKSLLDTTKGK-VVIGGEMDEATRFIPPTIVSDVSWDDSLM 337
Query: 387 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN-S 445
EE FGPVLP+I+++ ++E I N+ + L +FT D ++ I +G V IN +
Sbjct: 338 SEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDT 397
Query: 446 APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483
G D+ PF G+ DSG G+ + T ++ V
Sbjct: 398 LIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 7e-40
Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 13/321 (4%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP--TQGAVAALHMVHCFHLAGFPK 213
+GVV AI P+N+P + ++K+ PAL AGN++VLKP T A L + H FP
Sbjct: 141 AVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEH-TDFPP 199
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISI--SKKAGMIPLQMELGGKDACI 270
G+++ VT +G L P ++ +SFTG TG ++ A + + +ELGGK A I
Sbjct: 200 GVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLELGGKSAFI 259
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED 330
+L+DADL A + ++GQ C +V + D V A + + G P D
Sbjct: 260 VLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGDPAD 319
Query: 331 DCDIT-PVVTESSANFIEGLVMDAKQKAATFC-----QEYKREGNLIWPLLLDNVRPDMR 384
+ PV++ + ++ + A + F + G + P ++ + + R
Sbjct: 320 PGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDNNAR 379
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN 444
+A EE FGPVL VI + ++ + N S +GL G VF D +A ++ + TGTV +N
Sbjct: 380 VAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVN 439
Query: 445 SAPSRGPDHFPFQGLKDSGIG 465
D PF G K SGIG
Sbjct: 440 GGVWYSAD-APFGGYKQSGIG 459
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 8e-40
Identities = 121/444 (27%), Positives = 198/444 (44%), Gaps = 52/444 (11%)
Query: 23 RKSSSGKSVTIINPTTRKPHFRVQAC--TQEEVNKVVETAKLAQKSWAKTPLWKRAELLH 80
+SG+ + ++P +A T+E NK VE A A+K W+ P + RA +
Sbjct: 40 EVWTSGERIYQVSPH-NHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDRAAIFL 98
Query: 81 KAAAILK-----EQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
KAA +L E A K + + DAV E++ D + A+ + + +
Sbjct: 99 KAADLLSGPYRAEILAATMLGQSKTVYQAEIDAVAELI---DFFRFNAKYARELYEQQPI 155
Query: 136 LVSDSFPGN-ERTKYCLTSKIPL-GVVLAIPPFNYPV---NLAVSKIAPALIAGNSIVLK 190
S PG RT+Y PL G V AI PFN+ NLA APAL+ GN+++ K
Sbjct: 156 ----SAPGEWNRTEY-----RPLEGFVYAISPFNFTAIAGNLAG---APALM-GNTVIWK 202
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P ++ ++ AG P G+I+ V G G + D + P + I FTG T
Sbjct: 203 PSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKH 262
Query: 250 ISKKAGM-------IP-LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV 301
+ K+ P + E GGKD ++ AD++ + ++G F Y GQ+C+A
Sbjct: 263 LWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSR 322
Query: 302 ALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATF 360
V S+ ++ A+++++ VG P+D + V+ E S I + AK +
Sbjct: 323 LYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSAL 382
Query: 361 CQEY-----KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI-----RINSVEEGIHHC 410
G + P ++++ P + EE FGPVL V + + + +
Sbjct: 383 TILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVD-- 440
Query: 411 NASNFGLQGCVFTRDINKAILISD 434
+ +++GL G VF +D AIL +D
Sbjct: 441 STTSYGLTGAVFAKD-RDAILEAD 463
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 1e-39
Identities = 103/328 (31%), Positives = 159/328 (48%), Gaps = 32/328 (9%)
Query: 154 KIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAAL--HMVHCFH 207
P GVVL I P+NYP LA++ + A+ AGN+ VLKP P + + ++
Sbjct: 98 YEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTP---NTSKVIAKIIE--- 151
Query: 208 LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELG 264
F + ++ V G G E L + + I FTG G + + A + P+ +ELG
Sbjct: 152 -ETFDEEYVAVVEG-GVEENQEL-LDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELG 208
Query: 265 GKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324
GK CI+ EDA+L LAA IV G F +GQ C A LV ESV + ++++K ++ K
Sbjct: 209 GKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFY 268
Query: 325 VGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMR 384
P + D ++ E + + GL+ + K F RE I P +LDNV D
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNGK---IVFGGNTDRETLYIEPTILDNVTWDDP 325
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN 444
+ EE FGP+LPV+ ++++E I + L +F+ D + + + G IN
Sbjct: 326 VMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385
Query: 445 ------SAPSRGPDHFPFQGLKDSGIGS 466
+ P + PF G+ +SG+GS
Sbjct: 386 DTIMHLANP-----YLPFGGVGNSGMGS 408
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 9e-39
Identities = 125/427 (29%), Positives = 206/427 (48%), Gaps = 54/427 (12%)
Query: 24 KSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82
++G+ +INP + V+ T EV + +E+A A W TP +RA +L +A
Sbjct: 654 PVAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERA 713
Query: 83 AAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFP 142
A +++ Q + LV+E K +A+ EV + D + Y A + V D F
Sbjct: 714 ADLMEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQ-----------VRDDF- 761
Query: 143 GNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202
N+ + PLG V+ I P+N+P+ + ++A AL AGNS++ KP Q + A
Sbjct: 762 DND-------THRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQA 814
Query: 203 VHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGI------SISKK--- 253
V AG P G++ + G+G +G L + + FT G T + +++ +
Sbjct: 815 VRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFT-GSTEVARLLQRNLAGRLDP 873
Query: 254 AGM-IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
G IPL E GG++A I+ A + A+++ F +GQRC+A++V + + VAD
Sbjct: 874 QGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRT 933
Query: 313 VEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLV--MDAK-----QKAATFCQEY 364
++ ++ +A+ +G P+ DI PV+ + IE + M AK Q A +++
Sbjct: 934 LKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDW 993
Query: 365 KREGNLIWPLL--LDNVRPDMRIAWEEPFGPVLPVIR-----INSVEEGIHHCNASNFGL 417
+ G + P L LD+ R E FGPVL V+R ++ + E I NAS +GL
Sbjct: 994 QS-GTFVPPTLIELDSFDELKR----EVFGPVLHVVRYNRNQLDELIEQI---NASGYGL 1045
Query: 418 QGCVFTR 424
V TR
Sbjct: 1046 TLGVHTR 1052
|
Length = 1318 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 1e-37
Identities = 107/329 (32%), Positives = 159/329 (48%), Gaps = 31/329 (9%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHCFHLAGF 211
PLGVV I P+NYP+ LA+ + AL AGN +++KP P A+ A ++ F
Sbjct: 101 PLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLA-ELLA----EYF 155
Query: 212 PKGLISCVTGKGSEIG-DFLTM---HPSINCISFTG-GDTGISISKKAG--MIPLQMELG 264
+ ++ VTG G+++ F ++ H + FTG G + + A + P+ +ELG
Sbjct: 156 DEDEVAVVTG-GADVAAAFSSLPFDH-----LLFTGSTAVGRHVMRAAAENLTPVTLELG 209
Query: 265 GKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324
GK II DADL AA I G +GQ C A LV E + V KA VAK+
Sbjct: 210 GKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKM- 268
Query: 325 VGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-----EYKREGNLIWPLLLDNV 379
D+ D T ++ E ++GL+ DA+ K A + E + P L+ NV
Sbjct: 269 YPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNV 328
Query: 380 RPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD-INKAILISDAMET 438
DMR+ EE FGP+LP++ +S++E I + NA L F D + ++ +
Sbjct: 329 TDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTH-S 387
Query: 439 GTVQINSAPSR-GPDHFPFQGLKDSGIGS 466
G V IN D PF G+ SG+G+
Sbjct: 388 GGVTINDTLLHVAQDDLPFGGVGASGMGA 416
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 5e-37
Identities = 114/426 (26%), Positives = 194/426 (45%), Gaps = 36/426 (8%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G WR ++G V+ +NP +P V + E+ + + + A K W + P KR
Sbjct: 24 YVGGEWR--ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRG 81
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
E++ + L+ + + + E+ K + + EV D+ + +G + L
Sbjct: 82 EIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFA-------VGLSRQL 134
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK--PPTQ 194
P + PLG+V I FN+P + AL+ GN +V K P T
Sbjct: 135 NGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
Query: 195 GAVAALHMV--HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISK 252
A+ + P + + G G+EIG+ + I +SFTG S
Sbjct: 195 LITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTG-------SS 246
Query: 253 KAGMIPLQ----------MELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302
K G++ Q +EL G +A I+++DAD+ LA +++ +GQRCT +
Sbjct: 247 KVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRL 306
Query: 303 LVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVT-ESSANFIEGLVMDAKQ--KAA 358
L+ ES+ D ++E++ ++ +G P E + P+ T ES NF +G+ + Q K
Sbjct: 307 LLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKIL 366
Query: 359 TFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
T + EGN + P +++ + PD + EE FGPVL V++ ++EE I N+ GL
Sbjct: 367 TGGSAIESEGNFVQPTIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLS 425
Query: 419 GCVFTR 424
+FTR
Sbjct: 426 SSIFTR 431
|
Length = 508 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 1e-35
Identities = 123/421 (29%), Positives = 189/421 (44%), Gaps = 65/421 (15%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAIL---KEQKAPIAECLV--KEIAK 103
V K +E A A+K WA+ P RA + KAA +L + A L K + +
Sbjct: 67 DAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQ 126
Query: 104 PAKDAVTEVV---RSGDLVSYCAEEGVRILGEGKLLVSDSFPG--NERTKYCLTSKIPL- 157
DA E++ R V Y E + + L S G N R +Y PL
Sbjct: 127 AEIDAACELIDFLRFN--VKYAEE----LYAQQPL---SSPAGVWN-RLEY-----RPLE 171
Query: 158 GVVLAIPPFNYPV---NLAVSKIAPALIAGNSIVLKP-PTQGAVAALHMVH-CFHLAGFP 212
G V A+ PFN+ NLA APAL+ GN ++ KP T AV + ++V+ AG P
Sbjct: 172 GFVYAVSPFNFTAIGGNLA---GAPALM-GNVVLWKPSDT--AVLSNYLVYKILEEAGLP 225
Query: 213 KGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG-------MIP-LQMEL 263
G+I+ V G G +GD + P + + FTG T S+ K+ G P + E
Sbjct: 226 PGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGET 285
Query: 264 GGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL 323
GGK+ ++ AD+D V+G F Y GQ+C+A A V ES+ + E++ ++ ++
Sbjct: 286 GGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345
Query: 324 TVGAPEDDCD-ITPVVTESSANFIEGLVMDAKQK------AATFCQEYKREGNLIWPLLL 376
+G P+D + + V+ E + + I+G + AK A C G + P ++
Sbjct: 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD--DSVGYFVEPTVI 403
Query: 377 DNVRPDMRIAWEEPFGPVLPVI-----RINSVEEGIHHCNASNFGLQGCVFTRD---INK 428
+ P ++ EE FGPVL V E + S + L G +F +D I +
Sbjct: 404 ETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVD--TTSPYALTGAIFAQDRKAIRE 461
Query: 429 A 429
A
Sbjct: 462 A 462
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 9e-29
Identities = 118/417 (28%), Positives = 182/417 (43%), Gaps = 47/417 (11%)
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILG 131
W++++L ++ E + I L +++ KP+ ++ EV LVS C + I
Sbjct: 22 WRKSQL-KGLLRLVDENEDDIFAALRQDLGKPSAESFRDEV---SVLVSSCK---LAIKE 74
Query: 132 EGKLLVSDSFPGNERTKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
K + + T + ++I PLGVVL I +N+P L++ + A+ AGN++V
Sbjct: 75 LKKWMAPEKVKTP-LTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVV 133
Query: 189 LKPPTQG-AVAALHMVHCFHLAG-FPKGL----ISCVTGKGSEIGDFLTMHPSINCISFT 242
LKP A +AL LA P+ L I + G G L + I FT
Sbjct: 134 LKPSELAPATSAL-------LAKLIPEYLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFT 184
Query: 243 GGDTGISISKKAGMI----------PLQMELGGKDACIILEDADLDLAAANIVKGGF-SY 291
G S + G I P+ +ELGGK I+ DL +A I G +
Sbjct: 185 G-------SPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCN 237
Query: 292 SGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVM 351
+GQ C A LV ES A TL++ +K + K P++ D++ +V + L+
Sbjct: 238 NGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLD 297
Query: 352 DAKQKAATFCQEYKREGNL-IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 410
D + E NL I P +L + D I EE FGP+LP+I + +EE I
Sbjct: 298 DPSVADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEII 357
Query: 411 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIGS 466
N+ L VFT++ I +G V N + D PF G+ +SG G+
Sbjct: 358 NSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGA 414
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 4e-28
Identities = 97/323 (30%), Positives = 146/323 (45%), Gaps = 20/323 (6%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGL 215
PLGVVL +N+P+ L++ + A+ AGN++VLKP + F A PK L
Sbjct: 108 PLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATS-----AFLAANIPKYL 162
Query: 216 ----ISCVTGKGSEIGDFLTMHPSINCISFTGGD-TGISISKKAG--MIPLQMELGGKDA 268
+ + G G +G+ L H + I FTG G I A + P+ +ELGGK
Sbjct: 163 DSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCP 220
Query: 269 CI---ILEDADLDLAAANIVKGGFSY-SGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324
CI + D +A IV G + +GQ C A+ LV E A L+E +K+ + K
Sbjct: 221 CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF 280
Query: 325 VGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNL-IWPLLLDNVRPDM 383
P + + ++ + + L+ D + A+ E L I P +L N D
Sbjct: 281 GENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSIDEKKLFIEPTILLNPPLDS 340
Query: 384 RIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQI 443
I EE FGP+LP+I + +E+ I N+ L FT + I +G+V
Sbjct: 341 DIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTF 400
Query: 444 NSAPSR-GPDHFPFQGLKDSGIG 465
N A + D PF G+ +SG G
Sbjct: 401 NDAIIQYACDSLPFGGVGESGFG 423
|
Length = 484 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 8e-27
Identities = 111/433 (25%), Positives = 190/433 (43%), Gaps = 47/433 (10%)
Query: 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVV 113
+ V A+ A S PL R + L +L+E + I E L K++ KP +AV +E++
Sbjct: 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEIL 61
Query: 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKY---CLTSKIPLGVVLAIPPFNYPV 170
E + + K PLGVVL I +NYP+
Sbjct: 62 -------LVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPL 114
Query: 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVH----------CFHLAGFPKGLISCVT 220
L + + A+ AGN +V+KP ++ + A ++ C+ + V
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKP-SEVSPATAKLLAELIPKYLDKECYPV----------VL 163
Query: 221 GKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIILEDADL 277
G E + L + I +TG + G + + A + P+ +ELGGK C + + D+
Sbjct: 164 GGVEETTELLKQ--RFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDI 221
Query: 278 DLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPV 337
D+AA I G F +GQ C A L V + VE +K + + P++ D +
Sbjct: 222 DVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRI 281
Query: 338 VTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397
+ + ++ L+ + K A Q ++E I P +L +V+P + EE FGP+LP+
Sbjct: 282 INDRHFQRLKKLL--SGGKVAIGGQTDEKE-RYIAPTVLTDVKPSDPVMQEEIFGPILPI 338
Query: 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAME---TGTVQINSAPSR-GPDH 453
+ +N+++E I N+ L VF+ N +I+ + +G V +N D
Sbjct: 339 VTVNNLDEAIEFINSREKPLALYVFS---NNKKVINKILSNTSSGGVCVNDTIMHYTLDS 395
Query: 454 FPFQGLKDSGIGS 466
PF G+ +SG+G+
Sbjct: 396 LPFGGVGNSGMGA 408
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 4e-26
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 155 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPK 213
P G VL I FN+P+ + + ++A AL GN +++KP T ++ MV H AG P
Sbjct: 99 WPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPP 158
Query: 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIIL 272
++ + G G + L +HP+ + FTG ++ A + +EL G + ++
Sbjct: 159 EDVTLINGDG-KTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLG 217
Query: 273 EDAD-LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADT-LVEKVKAKVAKLTVGAPED 330
DA +D A V+ + SGQ+CTA + V E+ + T LVEK+KA +A+ +
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE---- 273
Query: 331 DCDITPVVTESSANFIE------GLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMR 384
D + PV T ++ I G V+ K G + L + ++
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILK 333
Query: 385 I--AW-EEPFGPV 394
EE FGP
Sbjct: 334 TYELVTEEIFGPF 346
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 9e-22
Identities = 96/373 (25%), Positives = 157/373 (42%), Gaps = 28/373 (7%)
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRS-GDLVSYCAEEGVRILGE 132
+RA +L A L E+K + L +D ++ G L +Y + G R L +
Sbjct: 60 ERARMLKALAQYLSERKEALYA-LAATTGATRRDNWVDIDGGIGTLFTY-SSLGRRELPD 117
Query: 133 GKLLVSDSF-----PGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
L+ D F G+ + ++ LT K GV + I FN+PV + K APA +AG
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPK--GGVAVQINAFNFPVWGLLEKFAPAFLAGVPT 175
Query: 188 VLKPPTQGAVAALHMVHCFHLAGF-PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
+ KP T A A +V +G P+G + + G GD L + ++FTG
Sbjct: 176 LAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGS---AGDLLDHLDHRDVVAFTGSAA 232
Query: 246 TGISISKKAGM----IPLQMELGGKDACIILEDA-----DLDLAAANIVKGGFSYSGQRC 296
T + + I E +A I+ EDA + DL A IV+ +GQ+C
Sbjct: 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKC 292
Query: 297 TAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQ 355
TA++ +V +++ + +++ ++A++AK+ +G P E+ D+ P+V+ +E V
Sbjct: 293 TAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLA 352
Query: 356 KAAT--FCQEYKREGNLIWPLLLDNVRPDM-RIAWEEPFGPVLPVIRINSVEEGIHHCNA 412
A + +G P LL P + E FGPV E
Sbjct: 353 AGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAAR 412
Query: 413 SNFGLQGCVFTRD 425
L + T D
Sbjct: 413 GGGSLVATLATSD 425
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 91.9 bits (229), Expect = 7e-20
Identities = 91/345 (26%), Positives = 141/345 (40%), Gaps = 48/345 (13%)
Query: 116 GDLVSYCAEEGVRILGEGKLLVSDSF-----PGNERTKYCLTSKIPLGVVLAIPPFNYPV 170
G L +Y A G R L LV G ++ LT + GV + I FN+PV
Sbjct: 102 GTLFAY-ASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPR--RGVAVHINAFNFPV 158
Query: 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDF 229
+ K APAL+AG +++KP T A +V +G P+G + + G ++ D
Sbjct: 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDH 218
Query: 230 LTMHPSINCISFTG-GDTGISISKKAGM----IPLQMELGGKDACIILEDA-----DLDL 279
L + ++FTG T + + I E +A I+ DA + DL
Sbjct: 219 LGEQ---DVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDL 275
Query: 280 AAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVV 338
+ + +GQ+CTA++ A V E+ D ++E +KA++AK+ VG P + + P+V
Sbjct: 276 FVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLV 335
Query: 339 TESSANFIEGLVMDAKQKAATFCQEYKR----------------EGNLIWPLLLDNVRPD 382
+ D + AT E + +G P LL PD
Sbjct: 336 SREQ-------REDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPD 388
Query: 383 MRIAWE--EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
A E FGPV ++ +S+ E I L V T D
Sbjct: 389 AATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 91.3 bits (226), Expect = 1e-19
Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 11/318 (3%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGL 215
PLGVVL I +NYP L++ + A+ AGN++VLK P++ A A+ ++
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLK-PSELAPASSALLAKLLEQYLDSSA 170
Query: 216 ISCVTGKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIIL 272
+ V G +E L + I +TG G I A + P+ +ELGGK ++
Sbjct: 171 VRVVEGAVTETTALLEQ--KWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD 228
Query: 273 EDADLDLAAANIVKGGFS-YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDD 331
D DL + I+ G + +GQ C + L + A +++ +K ++ P +
Sbjct: 229 SDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMES 288
Query: 332 CDITPVVTESSANFIEGLVMDAKQKA--ATFCQEYKREGNLIWPLLLDNVRPDMRIAWEE 389
D++ +V + + + L +D K+ + + E RE I P +L +V D I EE
Sbjct: 289 KDMSRIVNSTHFDRLSKL-LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEE 347
Query: 390 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR 449
FGP+LP++ +N++EE + L +FT + + + G + +N
Sbjct: 348 IFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVH 407
Query: 450 GPDH-FPFQGLKDSGIGS 466
H PF G+ +SG+G+
Sbjct: 408 LALHTLPFGGVGESGMGA 425
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 3e-18
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 158 GVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLI 216
GV L I FN+P K APAL+AG +++KP T A MV AG P G +
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGAL 209
Query: 217 SCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAGMIP----LQMELGGKDACII 271
S V G L + +SFTG +T + ++ + +E ++ ++
Sbjct: 210 SVVCGSS---AGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALL 266
Query: 272 LEDAD-----LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326
DA DL +V+ SGQ+CTA++ V E++ D + E + A++AK TVG
Sbjct: 267 GPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVG 326
Query: 327 APEDD 331
P +D
Sbjct: 327 NPRND 331
|
Length = 521 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 83.8 bits (207), Expect = 2e-17
Identities = 76/409 (18%), Positives = 137/409 (33%), Gaps = 58/409 (14%)
Query: 58 ETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKE----IAKPAKDAVTEVV 113
E+AK AQ++ A +R +++ A L + + +A V E I + + +
Sbjct: 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMG 60
Query: 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173
S + + I + P N P+GV + I P P+
Sbjct: 61 CSESKLYKNIDTERGITASVGHIQDVLLPDNGE---TYVRAFPIGVTMHILPSTNPL-SG 116
Query: 174 VSKIAPALIAGNSIVLKPPTQGAVA--ALHMVHCFHLA-GFPKGLISCVTGKGSEIGDFL 230
++ + N + +P AL ++ A PK L+ V E+ + L
Sbjct: 117 ITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEEL 176
Query: 231 TMHPSINCISFTGGDTGISISKKAG-MIPLQMELGGKDACIILEDADLDLAAANIVKGGF 289
HP I+ I TGG + + K IP+ G ++ E AD + A+ ++ F
Sbjct: 177 LSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKF 236
Query: 290 SYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGL 349
+ C + + V++ V D L E+ K K+ + P++ +
Sbjct: 237 -FDQNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQE------------TKPLSKE 283
Query: 350 VMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR----INSVEE 405
+ A E P+ R I++VE
Sbjct: 284 TTPSFDDEAL-----------------------------ESMTPLECQFRVLDVISAVEN 314
Query: 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHF 454
+ CV+T INK ++T + N + +G F
Sbjct: 315 AWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAF 363
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 2e-17
Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 48/345 (13%)
Query: 116 GDLVSYCAEEGVRILGEGKLLVSD---------SFPGNERTKYCLTSKIPLGVVLAIPPF 166
G L +Y A +G R L +LV +F G ++ LT GV + I F
Sbjct: 106 GTLFTY-ASKGRRELPNDTVLVEGEVEPLSKGGTFAG----RHILTPL--EGVAVHINAF 158
Query: 167 NYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSE 225
N+PV + K+APA +AG ++KP T A +V +G P+G + + G
Sbjct: 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICG---S 215
Query: 226 IGDFLTMHPSINCISFTG-GDTGI------SISKKAGMIPLQMELGGKDACIILEDA--- 275
GD L + ++FTG T ++ + +P E +A I+ DA
Sbjct: 216 AGDLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANS--VPFTAEADSLNAAILGPDATPG 273
Query: 276 --DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCD 333
+ DL +V+ +GQ+CTA++ A+V ++ D ++E ++A++AK+ VG P +
Sbjct: 274 TPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLE-G 332
Query: 334 IT--PVVT----ESSANFIEGLVMDAK-----QKAATFCQEYKREGNLIWPLLLDNVRPD 382
+ + + E + L+ A+ + +G P LL P
Sbjct: 333 VRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPL 392
Query: 383 MRIAWE--EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
A E FGPV ++ + ++E I L + T D
Sbjct: 393 EAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 7e-16
Identities = 94/399 (23%), Positives = 144/399 (36%), Gaps = 98/399 (24%)
Query: 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKE---------I 101
V+ V AK+AQ+ + + L R ++ L +AE V+E I
Sbjct: 36 ASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI 95
Query: 102 AK--------PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
AK P + +T +GD G L+ +
Sbjct: 96 AKNVAAAEKTPGVEDLTTEALTGD--------------NGLTLIEYA------------- 128
Query: 154 KIPLGVVLAIPPFNYP----VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA 209
P GV+ A+ P P +N A+S +A AGNS+V P +L + + A
Sbjct: 129 --PFGVIGAVTPSTNPTETIINNAISMLA----AGNSVVFSPHPGAKKVSLRAIELLNEA 182
Query: 210 ----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG----DTGISISKK---AGMIP 258
G P+ L+ V E L HP I + TGG + KK AG
Sbjct: 183 IVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMKSGKKAIGAG--- 239
Query: 259 LQMELGGKDACIILEDADLDLAAANIVKGG-FSYSGQRCTAVKVALVMESVADTLVEKVK 317
G ++ E AD++ AA +IVKG F + C A K +V++SVAD L+ ++
Sbjct: 240 -----AGNPPVVVDETADIEKAARDIVKGASFDNN-LPCIAEKEVIVVDSVADELMRLME 293
Query: 318 ---------AKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREG 368
+ KL ++ + A I + A + R
Sbjct: 294 KNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKI-------LEAAGINVPKDTR-- 344
Query: 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
LL+ + E PVLPV+R+ V+E I
Sbjct: 345 -----LLIVETDANHPFVVTELMMPVLPVVRVKDVDEAI 378
|
Length = 465 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 7e-15
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 51/339 (15%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
G W+ +S T+++P V ++E+N+ V++ + KS PL K
Sbjct: 2 LVAGKWKGAS--NYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPL-KNP 58
Query: 77 E-------LLHKAAAILKEQKAPIAECLVKEIAKPA----KDAVTEVVRSGDLVSYCAEE 125
E + H+ A L+ K + + + I + A A+ EVV + + A +
Sbjct: 59 ERYLLYGDVSHRVAHELR--KPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGD 116
Query: 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185
VR L S + PG+ + + + P G V I PFN+P+ + ++ AL GN
Sbjct: 117 QVRFLAR-----SFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGN 171
Query: 186 SIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD 245
+LK ++ +V + HL G P + + G + L + + FTG
Sbjct: 172 KPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSS 230
Query: 246 TGISISKKAGMIPLQMELGGKDACIILEDA------------DLDLAAANIVKGGFSYSG 293
++++ L +EL GK + LEDA D+D A + ++ SG
Sbjct: 231 K---VAER-----LALELHGK---VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSG 279
Query: 294 QRCTAVKVALVMESVADT-LVEKVKA-----KVAKLTVG 326
Q+C+A + E+ +++K+KA K+ LT+G
Sbjct: 280 QKCSAQSILFAHENWVQAGILDKLKALAEQRKLEDLTIG 318
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 9e-15
Identities = 96/390 (24%), Positives = 149/390 (38%), Gaps = 78/390 (20%)
Query: 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKE---------I 101
V+ V AK AQK + K L R +++ L +AE V+E I
Sbjct: 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI 63
Query: 102 AK--------PAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS 153
AK P + +T SGD G LV +
Sbjct: 64 AKNHLAAEKTPGTEDLTTTAWSGD--------------NGLTLVEYA------------- 96
Query: 154 KIPLGVVLAIPPFNYP----VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA 209
P GV+ AI P P +N ++S +A AGN++V P + + V + A
Sbjct: 97 --PFGVIGAITPSTNPTETIINNSISMLA----AGNAVVFNPHPGAKKVSAYAVELINKA 150
Query: 210 ----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG----DTGISISKKA-GMIPLQ 260
G P L+ V E + L HP IN + TGG +S KKA G
Sbjct: 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSSGKKAIGAGA-- 208
Query: 261 MELGGKDACIILEDADLDLAAANIVKGGFSYSGQ-RCTAVKVALVMESVADTLVEKVKAK 319
G ++ E AD++ AA +IV+G S+ C A K + ++SVAD L+ ++
Sbjct: 209 ----GNPPVVVDETADIEKAARDIVQGA-SFDNNLPCIAEKEVIAVDSVADYLIAAMQRN 263
Query: 320 VAKLTVGAPEDDCDITPVVTESSANFI-EGLV-MDAKQKAATFCQEYKREGNLIWPLLLD 377
A + + + + V+ + + V DA + E + L++
Sbjct: 264 GA-YVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADI----RLIIV 318
Query: 378 NVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
D EE P+LPV+R+ + +E I
Sbjct: 319 ETDKDHPFVVEEQMMPILPVVRVKNFDEAI 348
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 1e-13
Identities = 86/417 (20%), Positives = 157/417 (37%), Gaps = 41/417 (9%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTE 111
++ V AK+AQ+ + + AA ++ + +A+ V E +D V +
Sbjct: 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIK 60
Query: 112 VVRSGDLV--SYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169
+ + + Y E+ +L + L P+GVV +I P P
Sbjct: 61 NHFAAEYIYNVYKDEKTCGVLTG------------DENGGTLIIAEPIGVVASITPSTNP 108
Query: 170 VNLAVSKIAPALIAGNSIVLKP-PTQGAV---AALHMVHCFHLAGFPKGLISCVTGKGSE 225
+ + K +L NSI+ P P V AA ++ AG P+ LI + E
Sbjct: 109 TSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIE 168
Query: 226 IGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIV 285
+ L P I + TGG + + +G P G +I E AD+ A +IV
Sbjct: 169 LAQRLMKFPGIGLLLATGGPAVVKAAYSSGK-PAIGVGAGNTPVVIDETADIKRAVQSIV 227
Query: 286 KGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANF 345
K +G C + + +V++SV D ++ + + A + PV+ ++
Sbjct: 228 KSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQGAYKLTAEELQ--QVQPVILKNGDVN 285
Query: 346 IEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFG-----PVLPVIRI 400
+ + DA + AA + +E ++ + +A EPF PVL + R
Sbjct: 286 RDIVGQDAYKIAAAAGLKVPQETRIL-------IGEVTSLAEHEPFAHEKLSPVLAMYRA 338
Query: 401 NSVEEGIHHC----NASNFGLQGCVFTRDIN---KAILISDAMETGTVQINSAPSRG 450
+ + G +++ +I ++AM+T N S+G
Sbjct: 339 ANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQG 395
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 1e-09
Identities = 77/313 (24%), Positives = 108/313 (34%), Gaps = 70/313 (22%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE- 111
V+ A A +S+ +RA L A ++ + E P E
Sbjct: 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGEL 60
Query: 112 ------------VVRSGDLVSYCAEEGVRI---LGEGKLLVSDSFPGNERTKYCLTSKIP 156
+VR G + RI + + L P + + +P
Sbjct: 61 GRTTGQLRLFADLVREGSWL------DARIDPADPDRQPL-----PRPDLRRM----LVP 105
Query: 157 LGVVLAIPPFNYPVNLAVSKI----APALIAGNSIVLK-----PPTQGAVAALHMVHCFH 207
LG V N+P LA S A AL AG +V+K P T VA +
Sbjct: 106 LGPVAVFGASNFP--LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARA-IRAALR 162
Query: 208 LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGM----------- 256
G P G+ S + G G E+G L HP+I + FTG S++ G
Sbjct: 163 ATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTG-------SRRGGRALFDAAAARPE 215
Query: 257 -IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYS-----GQRCTAVKVALVMESVA- 309
IP ELG + IL A L I + GF S GQ CT + LV A
Sbjct: 216 PIPFYAELGSVNPVFILPGA-LAERGEAIAQ-GFVGSLTLGAGQFCTNPGLVLVPAGPAG 273
Query: 310 DTLVEKVKAKVAK 322
D + + +A
Sbjct: 274 DAFIAALAEALAA 286
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 1e-09
Identities = 87/442 (19%), Positives = 157/442 (35%), Gaps = 93/442 (21%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIA------KPAK 106
V+++VE A+ AQ+ +A + +++ A + +A+ V+E K K
Sbjct: 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIK 60
Query: 107 D-AVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
+ +E V + + V ++ E +E ++ P+GV+ A+ P
Sbjct: 61 NHFASEYVYN----DIKDMKTVGVIEE-----------DEEKGIVEIAE-PVGVIAALIP 104
Query: 166 FNYPVNLAVSKIAPALIAGNSIVLKPPTQGA---VAALHMVH-CFHLAGFPKGLISCVTG 221
P + A+ K AL N+I+ P + + A ++ AG P+GLI +
Sbjct: 105 STNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEE 164
Query: 222 KGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMI--------PLQMELG---GKDACI 270
E+ L HP ++ I TGG GM+ P +G G
Sbjct: 165 PSIELTQELMKHPDVDLILATGG---------PGMVKAAYSSGKP---AIGVGPGNVPAY 212
Query: 271 ILEDADLDLAAANIVKG-GFSYSGQRCTAVKVALVMESVADTLVEKVKA-KVAKLTVGAP 328
I E AD+ A +I+ F G C + + +V + + D + ++K L
Sbjct: 213 IDETADIKRAVKDIILSKTFDN-GTICASEQSVIVDDEIYDEVRAELKRRGAYFLN---E 268
Query: 329 EDDCDITPVVTESSANFIEGLVMDAK---QKAATFCQEYKREGNLIWPLLLDNVRPDMRI 385
E+ + + F +G ++ + A + L V D ++
Sbjct: 269 EEKEKLEKAL------FDDGGTLNPDIVGKSAQKIAE-----------LAGIEVPEDTKV 311
Query: 386 --------AWEEPF-----GPVLPVIRINSVEEGIHHCNA-SNFGLQG---CVFTRDINK 428
EEP PVL R EE + +G G + + D
Sbjct: 312 LVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEV 371
Query: 429 AILISDAMETGTVQINSAPSRG 450
+ M + +N+ S G
Sbjct: 372 IEEFALRMPVSRILVNTPSSLG 393
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 66/285 (23%), Positives = 101/285 (35%), Gaps = 47/285 (16%)
Query: 155 IPLGVVLAI-----PPFN-YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV----- 203
+P GV L I P +N YP A +L GN +++KP A+ L +
Sbjct: 192 VPRGVALVIGCSTFPTWNGYPGLFA------SLATGNPVIVKP-HPAAILPLAITVQVAR 244
Query: 204 HCFHLAGFPKGLISCVT-GKGSEIGDFLTMHPSINCISFTGGDT-GISISKKAGMIPLQM 261
AGF L++ I L P + I FTG + G + A +
Sbjct: 245 EVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYT 304
Query: 262 ELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV-------------MESV 308
E G + ++ DL N+ YSGQ CT + V + V
Sbjct: 305 EKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEV 364
Query: 309 ADTLVEKVKA-----KVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKA-ATFCQ 362
A L + A +GA + D + E+ + +++ ++ A F
Sbjct: 365 AADLAAAIDGLLADPARAAALLGAIQSP-DTLARIAEARQ--LGEVLLASEAVAHPEFPD 421
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407
R PLLL D EE FGP+ V+ +S + I
Sbjct: 422 ARVRT-----PLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSI 461
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 155 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF----HLAG 210
+P+GVV + P P + A+ K ++ A N+IV P + V AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACI 270
P+G I C+T E + L + + I TGG+ + + +G + + G A
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAAYSSGTPAIGVGPGNGPA-Y 221
Query: 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVK 317
I A++ A +I+ +G C + + +V E D +VE++K
Sbjct: 222 IERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELK 268
|
Length = 488 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 8/157 (5%)
Query: 155 IPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV-----HCFHLA 209
+P G+ L I +P + +L GN +++KP GA+ L + A
Sbjct: 192 VPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKP-HPGAILPLALTVQVAREVLGEA 250
Query: 210 GFPKGLISCVTGK-GSEIGDFLTMHPSINCISFTGGDT-GISISKKAGMIPLQMELGGKD 267
GF L++ G E L P++ I FTG + G + + A + E G +
Sbjct: 251 GFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQVYTEKAGVN 310
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
II D N+ YSGQ CT + LV
Sbjct: 311 TVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILV 347
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 77/354 (21%), Positives = 117/354 (33%), Gaps = 113/354 (31%)
Query: 156 PLGVVLAIPPFNYPVNLAVSKIAPALIA---GNSIVLKP-PT-------------QGAVA 198
P+GV+ I P P + A+ K ALIA N I+ P AVA
Sbjct: 108 PVGVIAGITPTTNPTSTAIFK---ALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVA 164
Query: 199 ALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMI- 257
AG PK +I + E+ + L HP I I TGG GM+
Sbjct: 165 ----------AGAPKDIIQWIEEPSVELTNALMNHPGIALILATGG---------PGMVK 205
Query: 258 -------PLQMELG---GKDACIILEDADLDLAAANIV--KGGFSYSGQRCTAVKVALVM 305
P LG G I + AD+ A +I+ K F G C + + +V
Sbjct: 206 AAYSSGKP---ALGVGAGNVPAYIDKTADIKRAVNDILLSK-TFDN-GMICASEQAVIVD 260
Query: 306 ESVADTLVEKV------------KAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDA 353
+ + D + E+ K+ K G +++ + + SA I A
Sbjct: 261 DEIYDEVKEEFASHGAYFLNKKELKKLEKFIFG--KENGALNADIVGQSAYKI------A 312
Query: 354 KQKAATFCQEYKREGNLIWPLLLDNVRPDMRI--------AWEEPFG-----PVLPVIRI 400
+ A F V D +I EP PVL + +
Sbjct: 313 EM--AGF-----------------KVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKA 353
Query: 401 NSVEEGIHHCNA-SNFGLQG---CVFTRDINKAILISDAMETGTVQINSAPSRG 450
E+ + FG G ++T D M+ + +N+ S+G
Sbjct: 354 KDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQG 407
|
Length = 862 |
| >gnl|CDD|218799 pfam05893, LuxC, Acyl-CoA reductase (LuxC) | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 54/287 (18%), Positives = 92/287 (32%), Gaps = 29/287 (10%)
Query: 147 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT--QGAVAALHMVH 204
+ P G+V+ + N P+ L V I ++ N +LKP + AAL
Sbjct: 79 RQDSYEKAQPRGLVVHVLAGNVPL-LPVMSILQGILVKNVNLLKPSSSDPFTAAALLASF 137
Query: 205 CFHLAGFP-KGLISCVTGKGS--EIGDFLTMHPSINCISFTGGDTGIS--ISKKAGMIPL 259
A P IS V ++ + H + + GG+ I
Sbjct: 138 ADVDATHPLARSISVVYWHSGDTQLEQLIMQH--ADVVIAWGGEEAIKWIRKHLPPGCDW 195
Query: 260 QMELGGKDACIILE-DADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318
G K + +++ A +D AA + Y Q C++ +V V TL E +
Sbjct: 196 IK-FGPKISFAVVDPPAAIDKAADGVAHDICFYDQQACSSPQVVFVESDDGITLREFAQR 254
Query: 319 KVAKLTVGAPEDDCDITPVVTES---SANFIEGLVMDAKQKAATFCQEYKREG--NLIWP 373
A L A I P S +A L + F E + W
Sbjct: 255 LAAALEKYAR-----ILPKAVPSFDEAAAIS--LTRAEAKLDYLFFAERGVVSGKDQDWT 307
Query: 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
++ + + P + V + + + + + N LQ
Sbjct: 308 VIWSEEQELL----NSPLSRTVYVKPVPDIFDVVRYVT-PNRTLQTV 349
|
This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalyzed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components. Length = 400 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.96 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.8 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.49 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.2 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.13 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.83 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.43 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.28 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.26 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.04 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.02 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.57 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.51 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.49 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 92.15 | |
| KOG2697 | 446 | consensus Histidinol dehydrogenase [Amino acid tra | 87.55 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-106 Score=794.61 Aligned_cols=468 Identities=35% Similarity=0.553 Sum_probs=446.5
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+||||+|+++.+++.++++||+||+++++++.++.+||+.++++|++||+ .|+.++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 4799999999998999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
+|+...+.+.|||+.+++ .++..+++.++|++.++...++... ........|+.++|+||++.|.|||||+
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~--------~~~~~~~~yt~~eP~GV~G~I~pWN~Pl 172 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTI--------PTDGEFFAYTRREPIGVCGQIIPWNFPL 172 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccC--------CCCCceEEEecCCcceeeeEeccCchHH
Confidence 999999999999999999 8999999999999999887755432 2234578999999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
....|+++|||++||+||+||++.+|+|+..++.++.++|+|+||+|+|+|.|.+.+.+|.+||+|+.|+|||| .+|+.
T Consensus 173 lm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~ 252 (501)
T KOG2450|consen 173 LMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKE 252 (501)
T ss_pred HHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc-ccc
Q 011080 250 ISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK-LTV 325 (494)
Q Consensus 250 v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~ 325 (494)
|.+.++ +||+.+|+|||+|.||.+|||++.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++.++ +++
T Consensus 253 I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kv 332 (501)
T KOG2450|consen 253 IMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKV 332 (501)
T ss_pred HhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhccccc
Confidence 988763 7999999999999999999999999999999999999999999999999999999999999999966 999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
||| ++.+.+||.+++.|++++.+||+.++++||+++.|+. .+|+|+.|||+.++.++|.+++||+||||+.|++|+
T Consensus 333 GdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~ 412 (501)
T KOG2450|consen 333 GDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFK 412 (501)
T ss_pred CCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecC
Confidence 999 8899999999999999999999999999999954433 479999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
+.||+|+++|++.|||+++|||+|.+++.++++++++|+||||++...+.. .||||+|+||+||+.|.+++++||+.|+
T Consensus 413 t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~-~PfgG~K~SG~GRE~g~~~l~~ytevKt 491 (501)
T KOG2450|consen 413 TEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQ-VPFGGFKMSGIGRELGEYGLEAYTEVKT 491 (501)
T ss_pred cHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEecccccccc-CCccccccccCCccccHHHHhhcceeeE
Confidence 999999999999999999999999999999999999999999999876644 9999999999999999999999999999
Q ss_pred EEEecCCCC
Q 011080 482 TVINLPTPS 490 (494)
Q Consensus 482 i~~~~~~~~ 490 (494)
|+++.++++
T Consensus 492 v~v~~~~~~ 500 (501)
T KOG2450|consen 492 VTVKLPQKN 500 (501)
T ss_pred EEEeCCCCC
Confidence 999988765
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-103 Score=739.65 Aligned_cols=466 Identities=30% Similarity=0.472 Sum_probs=440.8
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..+.||+|+|+.+.++.+|++.||++||+|+.++..+.++.+.|+.+|.+||+.|+.++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 45689999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|+++++.|.|||+.||++|+.-...+++|+++.+++.++... +.....+...+.++|+||+++|+|||||...
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii-------~s~~~~rr~i~ikQPvGV~alItPWNFP~AM 175 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDII-------PSLNPNRRLIVIKQPVGVVALITPWNFPAAM 175 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhcccc-------CCCCCCceEEEEeccceeEEEecCcCChHHH
Confidence 999999999999999999999999999999999999998753 2224467788999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCC---chhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK---GSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~---~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
...+..+||++||+||+||++++|++++.++++..+||+|+|++|+|.++ ..+.++.|+.+|+|+.|+|||| .+|+
T Consensus 176 ItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGK 255 (503)
T KOG2451|consen 176 ITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGK 255 (503)
T ss_pred HHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHH
Confidence 99999999999999999999999999999999999999999999999963 4578999999999999999999 9999
Q ss_pred HHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 249 SISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 249 ~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
.+.+++ ..|++++|||||.|.||.+|||+|.|++....++|.++||.|.+.+|+|||+++||+|+++|.++++++++|
T Consensus 256 iL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vG 335 (503)
T KOG2451|consen 256 ILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVG 335 (503)
T ss_pred HHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheecc
Confidence 998876 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|. +++++.||||++.+.++++.++++|+++|++++ +|.. ...+|++||||.+++.+|-+.+||+|||+.+|++|+
T Consensus 336 dG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFd 415 (503)
T KOG2451|consen 336 DGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFD 415 (503)
T ss_pred CCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeC
Confidence 99 899999999999999999999999999999995 4432 245999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|.||+|+++|+++.||++|+||+|..+..+++.+|++|+|.+|..-. +....||||+|+||+||+|+.+|+++|+..|.
T Consensus 416 teeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegli-s~~~~pFGGVKeSG~GREgskyGidey~~ik~ 494 (503)
T KOG2451|consen 416 TEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLI-SDAEAPFGGVKESGFGREGSKYGIDEYLVIKY 494 (503)
T ss_pred CHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeeccccee-cccccCcCCccccccCccccccchhhhhhhhe
Confidence 99999999999999999999999999999999999999999997654 34558999999999999999999999999999
Q ss_pred EEEec
Q 011080 482 TVINL 486 (494)
Q Consensus 482 i~~~~ 486 (494)
|++..
T Consensus 495 icig~ 499 (503)
T KOG2451|consen 495 ICIGT 499 (503)
T ss_pred eeecC
Confidence 98753
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-102 Score=807.57 Aligned_cols=463 Identities=30% Similarity=0.526 Sum_probs=433.1
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 58999999876567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
+++++|+|||+.+++.|+..+++.+++++..+++..+... +....+...+++++|+|||++|+|||||+.+.+
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 164 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI-------PGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT 164 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceEEEEEeeceEEEEECCCcChHHHHH
Confidence 9999999999999999999999999999887776544321 111113446788999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.|.+.
T Consensus 165 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~ 244 (482)
T PRK11241 165 RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQ 244 (482)
T ss_pred HHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977788999999999999999999 999999988
Q ss_pred c--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 254 A--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 254 a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+ .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+| ++
T Consensus 245 aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 324 (482)
T PRK11241 245 CAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEK 324 (482)
T ss_pred HHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 6 47999999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 407 (494)
.+++||++++.++++++++|++|+++|++++.|+. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 404 (482)
T PRK11241 325 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVI 404 (482)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999954432 258999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 408 ~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
+++|+++|||+++|||+|.++++++++++++|+|+||++....+ ..||||+|+||+|+++|.+|+++||+.|+|++.
T Consensus 405 ~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~-~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 405 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNE-VAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCC-CCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999998766443 489999999999999999999999999998764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=797.29 Aligned_cols=462 Identities=40% Similarity=0.663 Sum_probs=434.7
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
++||+|+|+.... .++++||+||+++++++.++.+|+++|+++|+++|+.|+.++..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999998644 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
+++++|+|||+.+++.|+..+++.++|+++.++++.+... +... ....++.++|+|||++|+|||||+.+.+
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~-------~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~ 151 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETI-------PTDK-GSKALVRREPLGVVGAITPWNFPLALAA 151 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-------CCCC-CcceEEEeecceEEEEECCCCCHHHHHH
Confidence 9999999999999999999999999999999887766531 1111 4678899999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
|++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+|||| .+|+.+++.
T Consensus 152 ~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~ 231 (472)
T COG1012 152 WKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAA 231 (472)
T ss_pred hhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987779999999999999999999 999999998
Q ss_pred c--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc-cccCCC-C
Q 011080 254 A--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK-LTVGAP-E 329 (494)
Q Consensus 254 a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g~p-~ 329 (494)
+ +.||+++|||||||+||++|||++.|++.+++++|+|+||.|++.+|+|||+++||+|+++|.++ ++ +++||| +
T Consensus 232 Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d 310 (472)
T COG1012 232 AAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLD 310 (472)
T ss_pred HhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCC
Confidence 8 68999999999999999999999999999999999999999999999999999999999999999 65 999996 8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHH
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 408 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 408 (494)
+.+++||++++.+++++.++|++++++|+++..|+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 311 ~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~ 390 (472)
T COG1012 311 PSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIE 390 (472)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHH
Confidence 89999999999999999999999999999885443 33389999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCC-CCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecC
Q 011080 409 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS-RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 409 ~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
++|+++|||+++|||+|..++.++++++++|+|+||+... ......||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 391 lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~~ 470 (472)
T COG1012 391 LANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKLG 470 (472)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEecC
Confidence 9999999999999999999999999999999999999864 444568999999999999999999999999999988754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-101 Score=807.52 Aligned_cols=465 Identities=26% Similarity=0.398 Sum_probs=433.2
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 56789999999765667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++..+..+.++... ....+...++.++|+|||++|+|||||+.+
T Consensus 193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~-------~~~~~~~~~~~reP~GVV~~I~PwNfPl~l 265 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLP-------NVSNGVDTYSIREPLGVCAGICPFNFPAMI 265 (604)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-------ccCCCccceEEecCccEEEEECCCccHHHH
Confidence 9999999999999999999999999999999888776654211 101133457889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.+..|+.|++|+.|+|||| .+|+.|+
T Consensus 266 ~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~ 344 (604)
T PLN02419 266 PLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIY 344 (604)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999954 67889999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|
T Consensus 345 ~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~ 423 (604)
T PLN02419 345 ARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGS 423 (604)
T ss_pred HHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCC
Confidence 876 37999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
++++++||++++.+++++.++|++|+++|++++ +|.. ..|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 424 d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~ 503 (604)
T PLN02419 424 EPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQAN 503 (604)
T ss_pred CCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecC
Confidence 889999999999999999999999999999995 4421 258999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--CcchHHHHHHhhce
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMTKI 479 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~ 479 (494)
|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+........+||||+|+||+| +++|.+|+++|++.
T Consensus 504 ~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~ 583 (604)
T PLN02419 504 SFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQI 583 (604)
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999874443345899999999999 79999999999999
Q ss_pred eEEEEec
Q 011080 480 KSTVINL 486 (494)
Q Consensus 480 k~i~~~~ 486 (494)
|+|+++.
T Consensus 584 K~v~~~~ 590 (604)
T PLN02419 584 KLVTQKQ 590 (604)
T ss_pred EEEEEcc
Confidence 9998885
|
|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-99 Score=790.84 Aligned_cols=483 Identities=91% Similarity=1.404 Sum_probs=448.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 46789999999876566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||..+++.|+..+++.+++++..+.+++..........++....+...+++++|+|||++|+|||||+.
T Consensus 94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 99999999999999999999999999999998877777654332221112221123346788999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEeccHHHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISIS 251 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~v~ 251 (494)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..||+++.|.||||.+|+.+.
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~g~~v~ 253 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAIS 253 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777889999999999999999998899999
Q ss_pred HHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCC
Q 011080 252 KKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDD 331 (494)
Q Consensus 252 ~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~ 331 (494)
+.++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+.
T Consensus 254 ~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 333 (496)
T PLN00412 254 KKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDD 333 (496)
T ss_pred HHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCccc
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999999557
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHh
Q 011080 332 CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411 (494)
Q Consensus 332 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 411 (494)
+++||++++.+.+++.+++++|+++|++++.+++.+|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|
T Consensus 334 ~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an 413 (496)
T PLN00412 334 CDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 413 (496)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHh
Confidence 89999999999999999999999999999766666799999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecCCCCC
Q 011080 412 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSY 491 (494)
Q Consensus 412 ~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~~~~~ 491 (494)
+++|||+++|||+|.+++.++++++++|+|+||++....++.+||||+|.||+|+++|.+|+++||+.|+|+++++++.|
T Consensus 414 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~~~~~~ 493 (496)
T PLN00412 414 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPKPSY 493 (496)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEecCCCCc
Confidence 99999999999999999999999999999999998654445689999999999999999999999999999999998999
Q ss_pred CCC
Q 011080 492 TVG 494 (494)
Q Consensus 492 ~~~ 494 (494)
|.|
T Consensus 494 ~~~ 496 (496)
T PLN00412 494 TMG 496 (496)
T ss_pred cCC
Confidence 875
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-99 Score=789.94 Aligned_cols=465 Identities=30% Similarity=0.480 Sum_probs=433.2
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 99 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI 99 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 35679999999876678899999999999999999999999999999999997 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||+.+++ .|+..+++.+++++..+.++.++... . ......++.++|+|||++|+|||||
T Consensus 100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVV~~I~PwN~P 171 (501)
T PLN02766 100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLK-------M-SRQLQGYTLKEPIGVVGHIIPWNFP 171 (501)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-------c-CCCceEEEEeccceEEEEECCCCCh
Confidence 9999999999999999997 59999999999999887766543211 0 1124467889999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++.+++..|+.||+++.|+|||| .+|+
T Consensus 172 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~ 251 (501)
T PLN02766 172 STMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGR 251 (501)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 999999999999999999999999999999999999999999999999999987889999999999999999999 9999
Q ss_pred HHHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.|.+.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 ~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~ 331 (501)
T PLN02766 252 KIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVV 331 (501)
T ss_pred HHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 9998763 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+++++.++|++++++|++++.++. ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 332 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 411 (501)
T PLN02766 332 GDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFK 411 (501)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeC
Confidence 999 8899999999999999999999999999999964332 358999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++||+.|+
T Consensus 412 ~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 412 TVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFD-PDCPFGGYKMSGFGRDQGMDALDKYLQVKS 490 (501)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccCcCCccchHHHHHHHhceEE
Confidence 9999999999999999999999999999999999999999999876544 448999999999999999999999999999
Q ss_pred EEEec
Q 011080 482 TVINL 486 (494)
Q Consensus 482 i~~~~ 486 (494)
|++.+
T Consensus 491 v~~~~ 495 (501)
T PLN02766 491 VVTPL 495 (501)
T ss_pred EEEec
Confidence 98863
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=784.48 Aligned_cols=474 Identities=24% Similarity=0.401 Sum_probs=435.2
Q ss_pred ccccccccCCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHH
Q 011080 3 VFEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82 (494)
Q Consensus 3 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~ 82 (494)
+|.|+...-..+++||||+|+.+ +..++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 10 ~~~~~~~~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~ 87 (508)
T PLN02315 10 FLSEIGLSSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQI 87 (508)
T ss_pred HHHHHhcCccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45566666677889999999863 5789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEe
Q 011080 83 AAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLA 162 (494)
Q Consensus 83 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 162 (494)
++.|++++++|++++++|+|||+.+++.|+..+++.++|++..++.+.+... +....+...+..++|+|||++
T Consensus 88 a~~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~P~GVV~~ 160 (508)
T PLN02315 88 GDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSII-------PSERPNHMMMEVWNPLGIVGV 160 (508)
T ss_pred HHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cCCCCCceeEEEEecceEEEE
Confidence 9999999999999999999999999999999999999999887766544321 111123445678999999999
Q ss_pred eCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHH----HHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccE
Q 011080 163 IPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALH----MVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINC 238 (494)
Q Consensus 163 i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~----l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~ 238 (494)
|+|||||+.++++++++||++||+||+|||+.+|.++.. +.++|.++|+|+|++|+++| +.+.+..|..||+++.
T Consensus 161 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~ 239 (508)
T PLN02315 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPL 239 (508)
T ss_pred ECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCE
Confidence 999999999999999999999999999999999999887 67888999999999999998 7788999999999999
Q ss_pred EEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHH
Q 011080 239 ISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEK 315 (494)
Q Consensus 239 v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 315 (494)
|+|||| .+|+.+.+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 240 v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~ 319 (508)
T PLN02315 240 VSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQ 319 (508)
T ss_pred EEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHH
Confidence 999999 9999999865 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccc
Q 011080 316 VKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPF 391 (494)
Q Consensus 316 l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~f 391 (494)
|+++++++++||| ++++.+||+++..+.+++.+++++++++|++++.|+. .+|+|++|||+ +++++|++++||+|
T Consensus 320 l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~F 398 (508)
T PLN02315 320 LLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELF 398 (508)
T ss_pred HHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCc
Confidence 9999999999999 8899999999999999999999999999999954432 35899999999 59999999999999
Q ss_pred cceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHh--hcccceEEECCCCCCCCCCCCccCccCCCCCCcch
Q 011080 392 GPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD--AMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGI 469 (494)
Q Consensus 392 gPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~--~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g 469 (494)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++ ++++|+|+||.........+||||+|.||+|+++|
T Consensus 399 GPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G 478 (508)
T PLN02315 399 GPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAG 478 (508)
T ss_pred CCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccch
Confidence 9999999999999999999999999999999999999999985 79999999998665444558999999999999999
Q ss_pred HHHHHHhhceeEEEEecC
Q 011080 470 TNSINMMTKIKSTVINLP 487 (494)
Q Consensus 470 ~~~l~~~~~~k~i~~~~~ 487 (494)
.+++++||+.|+|+++++
T Consensus 479 ~~~l~~ft~~k~v~~~~~ 496 (508)
T PLN02315 479 SDSWKQYMRRSTCTINYG 496 (508)
T ss_pred HHHHHHHhhEEEEEEecC
Confidence 999999999999988763
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-98 Score=785.47 Aligned_cols=465 Identities=32% Similarity=0.513 Sum_probs=434.3
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++
T Consensus 24 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 103 (498)
T PLN02278 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKED 103 (498)
T ss_pred cccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999998765678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||..+++.|+..+++.+++++..+.++.+... +....+...++.++|+|||++|+|||||+.+
T Consensus 104 la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~ 176 (498)
T PLN02278 104 LAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDII-------PSPFPDRRLLVLKQPVGVVGAITPWNFPLAM 176 (498)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceEEEEeecccEEEEECCCccHHHH
Confidence 999999999999999999999999999999988877654321 1111134567889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|+++|++.+.++.|+.||+++.|+|||| .+|+.|+
T Consensus 177 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 256 (498)
T PLN02278 177 ITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM 256 (498)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977778899999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|
T Consensus 257 ~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~ 336 (498)
T PLN02278 257 AGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGF 336 (498)
T ss_pred HHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 877 37999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
++++++||++++.+.+++.++|++++++|++++.|+ . .+|+|++|||+.+++++|+++++|+||||++|++|+|+||
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~de 416 (498)
T PLN02278 337 EEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEE 416 (498)
T ss_pred CCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHH
Confidence 889999999999999999999999999999995433 2 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.+.++++++++++|.|+||+..... ..+||||+|+||+|+++|.+|+++|++.|+|++.
T Consensus 417 ai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 417 AIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 999999999999999999999999999999999999999876544 4589999999999999999999999999999764
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-98 Score=780.70 Aligned_cols=461 Identities=29% Similarity=0.444 Sum_probs=427.8
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+ ++..++++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 468999999875 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 94 AECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
++++++|+|||..+++ .|+..+++.+++++...+...+.... .. ..+...++.++|+|||++|+|||||+.+
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~---~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 153 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG---EY----LEGHTSMIRRDPLGVVASIAPWNYPLMM 153 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC---cc----CCCceEEEEEecceEEEEECCCCchHHH
Confidence 9999999999999997 59999999999998876654432110 00 1134567899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..+++++.+ ++|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.++
T Consensus 154 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~-~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 232 (472)
T TIGR03374 154 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232 (472)
T ss_pred HHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHH-hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999988 49999999999977889999999999999999999 9999998
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 233 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~ 312 (472)
T TIGR03374 233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD 312 (472)
T ss_pred HHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 877 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcC-CEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKA-ATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
++++++||++++.+++++.++|++++++| +++. ++.. ..|+|+.|||+.+++++|++++||+||||++|++|+|+|
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 392 (472)
T TIGR03374 313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEE 392 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHH
Confidence 88999999999999999999999999999 7885 4432 248999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 393 eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 393 QVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLV-SEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999999876544 458999999999999999999999999999875
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-98 Score=786.02 Aligned_cols=467 Identities=31% Similarity=0.466 Sum_probs=433.3
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 136 (538)
T PLN02466 57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN 136 (538)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 34789999999876778999999999999999999999999999999999997 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||+.+++ .|+..+++.+++++.+..+..+... +. ......++.++|+|||++|+|||||
T Consensus 137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~-------~~-~~~~~~~~~~~P~GVV~~I~PwN~P 208 (538)
T PLN02466 137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTV-------PA-DGPHHVQTLHEPIGVAGQIIPWNFP 208 (538)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cc-CCCceEEEEEecceEEEEECCCchH
Confidence 9999999999999999996 5999999999999887766554321 11 1123467899999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+++..|..||++|.|+|||| .+|+
T Consensus 209 ~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~ 288 (538)
T PLN02466 209 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGK 288 (538)
T ss_pred HHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999999977788999999999999999999 9999
Q ss_pred HHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|+++..++++
T Consensus 289 ~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 368 (538)
T PLN02466 289 IVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVV 368 (538)
T ss_pred HHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 998866 36899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+++++++++++++++|+++..++. ..|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 369 G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~ 448 (538)
T PLN02466 369 GDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFK 448 (538)
T ss_pred CCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeC
Confidence 999 8899999999999999999999999999999954332 358999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++|++.|+
T Consensus 449 d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~-~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~ 527 (538)
T PLN02466 449 DLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFD-AAIPFGGYKMSGIGREKGIYSLNNYLQVKA 527 (538)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCC-CCCCcCCCCcCccCcccHHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999999866544 448999999999999999999999999999
Q ss_pred EEEecCC
Q 011080 482 TVINLPT 488 (494)
Q Consensus 482 i~~~~~~ 488 (494)
|++.+..
T Consensus 528 v~~~~~~ 534 (538)
T PLN02466 528 VVTPLKN 534 (538)
T ss_pred EEEeCCC
Confidence 9886543
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-98 Score=780.74 Aligned_cols=468 Identities=31% Similarity=0.473 Sum_probs=432.5
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++
T Consensus 5 ~~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 84 (486)
T cd07140 5 PHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQ 84 (486)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999766678899999999999999999999999999999999997 5999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||..+++ .|+..+++.+++++.+.++..+..... . .........++.++|+|||++|+|||||
T Consensus 85 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~--~~~~~~~~~~~~r~P~GVv~~I~PwN~P 160 (486)
T cd07140 85 EELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPI--N--QARPNRNLTLTKREPIGVCGIVIPWNYP 160 (486)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc--c--ccCCCCceEEEEeeccceEEEEcCCchH
Confidence 9999999999999999996 699999999999998877665432111 0 0001123467889999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+++..|..||+|+.|+|||| .+|+
T Consensus 161 ~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 240 (486)
T cd07140 161 LMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGK 240 (486)
T ss_pred HHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 999999999999999999999999999999999999999999999999999977788999999999999999999 9999
Q ss_pred HHHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 241 ~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~ 320 (486)
T cd07140 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKI 320 (486)
T ss_pred HHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCc
Confidence 9988763 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+++++.++|++|+++|++++.|+. .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~ 400 (486)
T cd07140 321 GDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400 (486)
T ss_pred cCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcC
Confidence 999 7799999999999999999999999999999964432 358999999999999999999999999999999999
Q ss_pred --CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 402 --SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 402 --~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|++|||+++|+++|||+++|||+|.++++++++++++|.|+||++.... ..+||||+|+||+|+++|.+|+++||+.
T Consensus 401 ~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~ft~~ 479 (486)
T cd07140 401 DGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTD-VAAPFGGFKQSGFGKDLGEEALNEYLKT 479 (486)
T ss_pred CCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccCcCCCcchHHHHHHhhcE
Confidence 6999999999999999999999999999999999999999999976544 3489999999999999999999999999
Q ss_pred eEEEEe
Q 011080 480 KSTVIN 485 (494)
Q Consensus 480 k~i~~~ 485 (494)
|+|+++
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-98 Score=781.32 Aligned_cols=466 Identities=31% Similarity=0.539 Sum_probs=433.5
Q ss_pred CCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 11 NGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 11 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (488)
T PRK13252 4 QPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERN 83 (488)
T ss_pred CccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 45678999999997666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||..+++ .|+..+++.++++++......+... +. ..+...+++++|+|||++|+|||||
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~-------~~-~~~~~~~~~~~PlGVv~~I~p~N~P 155 (488)
T PRK13252 84 DELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQI-------PL-RGGSFVYTRREPLGVCAGIGAWNYP 155 (488)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-------cc-CCCceEEEEEeeeeEEEEECCCchH
Confidence 9999999999999999998 4999999999999887765443321 11 1134567899999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++. +++.|+.||++|.|+|||| .+|+
T Consensus 156 ~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~ 234 (488)
T PRK13252 156 IQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGK 234 (488)
T ss_pred HHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999665 8999999999999999999 9999
Q ss_pred HHHHHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 249 SISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 249 ~v~~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
.+.+.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 235 ~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (488)
T PRK13252 235 KVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314 (488)
T ss_pred HHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 9998773 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-------CCCceeecEEEeeCCCCCCCcccccccceeeeE
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 398 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 398 (494)
|| ++++++||++++.+++++++++++++++|++++.++. ..|+|++|||+.++++++++++||+||||++|+
T Consensus 315 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~ 394 (488)
T PRK13252 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVL 394 (488)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEE
Confidence 99 7899999999999999999999999999999953332 258999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhc
Q 011080 399 RINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478 (494)
Q Consensus 399 ~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~ 478 (494)
+|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|.||+|+++|.+|+++||+
T Consensus 395 ~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~ft~ 473 (488)
T PRK13252 395 TFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESP-AEMPVGGYKQSGIGRENGIATLEHYTQ 473 (488)
T ss_pred eeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCC-CCCCCCCCccCcCCcCChHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999865543 458999999999999999999999999
Q ss_pred eeEEEEec
Q 011080 479 IKSTVINL 486 (494)
Q Consensus 479 ~k~i~~~~ 486 (494)
.|+|++++
T Consensus 474 ~k~i~~~~ 481 (488)
T PRK13252 474 IKSVQVEM 481 (488)
T ss_pred eEEEEEeC
Confidence 99998875
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-98 Score=779.43 Aligned_cols=466 Identities=32% Similarity=0.470 Sum_probs=430.0
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
.+||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++. |+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 3699999987666678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCC-CCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 94 AECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGN-ERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
++++++|+|||..+++. |+..+++.+++++.++....+..... ..+.. ......++.++|+|||++|+|||||+.
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 157 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAP---SIPSMQGERYTAFTRREPVGVVAGIVPWNFSVM 157 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc---ccccccCCCceEEEEEeecceEEEEcCCChHHH
Confidence 99999999999999985 99999999999988776654432110 01110 112456789999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++. .+..|+.||+++.|+|||| .+|+.+
T Consensus 158 ~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i 236 (477)
T cd07113 158 IAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKI 236 (477)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999765 8899999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 237 ~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 237 GRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9877 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
++++++||++++.+++++.++|++|+++|++++.|+. ..|+|++|||+.+++++|+++++|+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 7899999999999999999999999999999964432 248999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||++.... ..+||||+|+||+|+++|.+++++||+.|+|++
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 475 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLD-PAVPFGGMKQSGIGREFGSAFIDDYTELKSVMI 475 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCccccCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999999876544 458999999999999999999999999999987
Q ss_pred e
Q 011080 485 N 485 (494)
Q Consensus 485 ~ 485 (494)
+
T Consensus 476 ~ 476 (477)
T cd07113 476 R 476 (477)
T ss_pred e
Confidence 5
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=775.61 Aligned_cols=462 Identities=34% Similarity=0.544 Sum_probs=429.8
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (475)
T cd07117 1 YGLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELL 80 (475)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 35799999997766788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 94 AECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
++++++|+|||+.+++. |+..+++.+++++..+.+..+.... . ......+++++|+|||++|+|||||+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GVV~~I~PwN~Pl~~ 152 (475)
T cd07117 81 AMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANM-------I-DEDTLSIVLREPIGVVGQIIPWNFPFLM 152 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------c-CCCceeEEEEeecceEEEECCCccHHHH
Confidence 99999999999999985 9999999999998776654433211 1 1133567899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..++++|.+ ++|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.+.
T Consensus 153 ~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~-~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 231 (475)
T cd07117 153 AAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQD-VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVA 231 (475)
T ss_pred HHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHH-hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999988 49999999999977788999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.+.++++|+|
T Consensus 232 ~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~ 311 (475)
T cd07117 232 IAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPL 311 (475)
T ss_pred HHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 876 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
++++++||++++.+.+++.+++++++++|++++ ++.. .+|+|++|||+.++++++++++||+||||++|++|+
T Consensus 312 ~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 391 (475)
T cd07117 312 DPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFK 391 (475)
T ss_pred CCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEEC
Confidence 889999999999999999999999999999995 4322 258999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|.||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++... ..+||||+|+||+|+++|.+|+++||+.|+
T Consensus 392 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 392 TEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIP-AGAPFGGYKKSGIGRETHKSMLDAYTQMKN 470 (475)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCccCcCCCCchHHHHHHHhCeEE
Confidence 9999999999999999999999999999999999999999999866544 458999999999999999999999999999
Q ss_pred EEEe
Q 011080 482 TVIN 485 (494)
Q Consensus 482 i~~~ 485 (494)
|+++
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 9875
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=776.23 Aligned_cols=472 Identities=33% Similarity=0.493 Sum_probs=437.5
Q ss_pred cCCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHh-----HHhcCCCHHHHHHHHHHHHH
Q 011080 10 ENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQ-----KSWAKTPLWKRAELLHKAAA 84 (494)
Q Consensus 10 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~ 84 (494)
|-...++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++|| +.|+.+|..+|.++|+++++
T Consensus 4 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~ 83 (503)
T PLN02467 4 PVPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAA 83 (503)
T ss_pred ccCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHH
Confidence 3455679999999987667889999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeC
Q 011080 85 ILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164 (494)
Q Consensus 85 ~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 164 (494)
.|++++++|++++++|+|||+.+++.|+..+++.+++++..++++.+.... ....+ ......+++++|+|||++|+
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~P~GVv~~I~ 159 (503)
T PLN02467 84 KITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKA--PVSLP--METFKGYVLKEPLGVVGLIT 159 (503)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc--ccCCC--CCCceeEEEEecCceEEEEC
Confidence 999999999999999999999999999999999999999888876544211 00011 11234678999999999999
Q ss_pred CCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc
Q 011080 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244 (494)
Q Consensus 165 p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs 244 (494)
|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||
T Consensus 160 PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs 239 (503)
T PLN02467 160 PWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGS 239 (503)
T ss_pred CCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999987788999999999999999999
Q ss_pred -HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 245 -DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 245 -~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
.+|+.+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 240 ~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 319 (503)
T PLN02467 240 TATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAK 319 (503)
T ss_pred HHHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHH
Confidence 9999999876 4799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-----CCCceeecEEEeeCCCCCCCccccccccee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVL 395 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 395 (494)
++++||| ++++++||++++.+++++.+++++++++|++++.++. ..|+|++|||+.++++++++++||+||||+
T Consensus 320 ~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 399 (503)
T PLN02467 320 NIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVL 399 (503)
T ss_pred hcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceE
Confidence 9999999 7899999999999999999999999999999954332 258999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHH
Q 011080 396 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475 (494)
Q Consensus 396 ~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~ 475 (494)
+|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|.||+|+++|.+|+++
T Consensus 400 ~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~ 478 (503)
T PLN02467 400 CVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCF-CQAPWGGIKRSGFGRELGEWGLEN 478 (503)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccCcCCCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876543 458999999999999999999999
Q ss_pred hhceeEEEEec
Q 011080 476 MTKIKSTVINL 486 (494)
Q Consensus 476 ~~~~k~i~~~~ 486 (494)
|++.|+|++.+
T Consensus 479 ft~~k~i~~~~ 489 (503)
T PLN02467 479 YLSVKQVTKYI 489 (503)
T ss_pred hhCeEEEEEec
Confidence 99999998864
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-97 Score=778.23 Aligned_cols=462 Identities=32% Similarity=0.491 Sum_probs=430.2
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH--hcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++. |+.+|..+|.++|+++++.|++++
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 567899999997666788999999999999999999999999999999999975 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||..+++ .|+..+++.+++++.+.++..+... +. ......++.++|+|||++|+|||||
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~-------~~-~~~~~~~~~~~P~GVv~~I~pwN~P 154 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTL-------PA-DGPHHVYTLHEPIGVVGQIIPWNFP 154 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cc-CCCceEEEEEeceeeEEEECCCccH
Confidence 9999999999999999997 4999999999999887766544321 11 1123457889999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|..||+++.|+|||| .+|+
T Consensus 155 ~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~ 234 (476)
T cd07142 155 LLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGK 234 (476)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHH
Confidence 999999999999999999999999999999999999999999999999999977778999999999999999999 9999
Q ss_pred HHHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.+.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++
T Consensus 235 ~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 314 (476)
T cd07142 235 IIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVV 314 (476)
T ss_pred HHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9998763 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+++++.+++++++++|++++.|+. .+|+|+.|||+.++++++++++||+||||++|++|+
T Consensus 315 G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 394 (476)
T cd07142 315 GDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFK 394 (476)
T ss_pred CCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeC
Confidence 999 7899999999999999999999999999999964332 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++||+.|+
T Consensus 395 ~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~ 473 (476)
T cd07142 395 TVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFD-ASIPFGGYKMSGIGREKGIYALNNYLQVKA 473 (476)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCccCcCCccchHHHHHHhhheeE
Confidence 9999999999999999999999999999999999999999999876544 458999999999999999999999999999
Q ss_pred EE
Q 011080 482 TV 483 (494)
Q Consensus 482 i~ 483 (494)
|+
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-97 Score=775.71 Aligned_cols=463 Identities=33% Similarity=0.484 Sum_probs=431.6
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (480)
T cd07559 1 YDNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELL 80 (480)
T ss_pred CCccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 94 AECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
++++++|+|||+.+++ .|+..+++.+++++.......+.... . ..+...++.++|+|||++|+|||||+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 152 (480)
T cd07559 81 AVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE-------I-DEDTLSYHFHEPLGVVGQIIPWNFPLLM 152 (480)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------C-CCCceeEEEEeccceEEEECCCchHHHH
Confidence 9999999999999997 49999999999998877654433211 1 1234567889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+|||| .+|+.|.
T Consensus 153 ~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~ 231 (480)
T cd07559 153 AAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIM 231 (480)
T ss_pred HHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999996 9999999999987889999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCC-----CHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDA-----DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
+.+ .++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 232 ~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 311 (480)
T cd07559 232 QYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIK 311 (480)
T ss_pred HHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 886 479999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEee-ccc------CCCceeecEEEeeCCCCCCCcccccccceee
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-EYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 396 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~-~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 396 (494)
+|+| ++++++||++++.+.+++.+++++|+++|++++. |.. ..|+|++|||+.+++++|++++||+||||++
T Consensus 312 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 391 (480)
T cd07559 312 VGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLA 391 (480)
T ss_pred CCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEE
Confidence 9999 8899999999999999999999999999999954 322 2589999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHh
Q 011080 397 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMM 476 (494)
Q Consensus 397 v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~ 476 (494)
|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++|
T Consensus 392 v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~~ 470 (480)
T cd07559 392 VITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYP-AHAPFGGYKKSGIGRETHKMMLDHY 470 (480)
T ss_pred EEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCcCCCccCcCCccChHHHHHHh
Confidence 999999999999999999999999999999999999999999999999866544 4589999999999999999999999
Q ss_pred hceeEEEEec
Q 011080 477 TKIKSTVINL 486 (494)
Q Consensus 477 ~~~k~i~~~~ 486 (494)
|+.|+|+++|
T Consensus 471 ~~~k~v~~~~ 480 (480)
T cd07559 471 QQTKNILVSY 480 (480)
T ss_pred hceEEEEEeC
Confidence 9999998864
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-97 Score=775.54 Aligned_cols=464 Identities=31% Similarity=0.492 Sum_probs=429.8
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+.++..++++||+||+++++++.++.++++.++++|++|++.|+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (478)
T cd07085 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDEL 80 (478)
T ss_pred CCceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHH
Q 011080 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 173 (494)
++++++|+|||+.+++.|+..+++.+++++.......++.. +....+...+..++|+|||++|+|||||+.+.
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 153 (478)
T cd07085 81 ARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYL-------ENVARGIDTYSYRQPLGVVAGITPFNFPAMIP 153 (478)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeec-------ccCCCCceeEEEEecceEEEEECCCChHHHHH
Confidence 99999999999999999999999999998876554433321 11011345688999999999999999999999
Q ss_pred HhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHH
Q 011080 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252 (494)
Q Consensus 174 ~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~ 252 (494)
++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|+ .+.+..|+.||+++.|+|||| .+|+.+.+
T Consensus 154 ~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~ 232 (478)
T cd07085 154 LWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYE 232 (478)
T ss_pred HHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999984 568899999999999999999 99999988
Q ss_pred HcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 253 ~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| +
T Consensus 233 ~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~ 312 (478)
T cd07085 233 RAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDD 312 (478)
T ss_pred HHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 764 7999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
+++++||++++.+.+++.++|++++++|++++.++. .+|+|++|||+.+++++++++++|+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 392 (478)
T cd07085 313 PGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDT 392 (478)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCC
Confidence 899999999999999999999999999999954321 2589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--CcchHHHHHHhhcee
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMTKIK 480 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~k 480 (494)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......+||||+|+||+| +++|.+|+++|++.|
T Consensus 393 ~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k 472 (478)
T cd07085 393 LDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceE
Confidence 999999999999999999999999999999999999999999875544455899999999999 578999999999999
Q ss_pred EEEEe
Q 011080 481 STVIN 485 (494)
Q Consensus 481 ~i~~~ 485 (494)
+|+++
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 99875
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-97 Score=777.30 Aligned_cols=465 Identities=33% Similarity=0.532 Sum_probs=432.9
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 80 (488)
T TIGR02299 1 IGHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEI 80 (488)
T ss_pred CCccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHH
Q 011080 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 173 (494)
++++++|+|||+.+++.|+..+++.++++++.+........ .+.. ....+..++|+|||++|+|||||+.+.
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 152 (488)
T TIGR02299 81 AVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRT------YPVD--THLNYTVRVPVGPVGLITPWNAPFMLS 152 (488)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCcc------ccCC--CceEEEEEEecceEEEECCCccHHHHH
Confidence 99999999999999999999999999999887764332211 1111 245678899999999999999999999
Q ss_pred HhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHH
Q 011080 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252 (494)
Q Consensus 174 ~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~ 252 (494)
++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..||+++.|+|||| .+|+.+++
T Consensus 153 ~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 232 (488)
T TIGR02299 153 TWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232 (488)
T ss_pred HHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788899999999999999999 99999998
Q ss_pred Hc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 253 KA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 253 ~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| +
T Consensus 233 ~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence 76 48999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c---------CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K---------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~---------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
+++++||++++.+.+++.+++++++++|+++..++ . .+|+|++|||+.++++++++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 89999999999999999999999999999995432 2 2488999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++|++.
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 471 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRH-LPTPFGGVKASGIGREGGTYSFDFYTET 471 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCccCcCCccchHHHHHHHhce
Confidence 999999999999999999999999999999999999999999999876644 4489999999999999999999999999
Q ss_pred eEEEEecC
Q 011080 480 KSTVINLP 487 (494)
Q Consensus 480 k~i~~~~~ 487 (494)
|+|++++.
T Consensus 472 k~i~~~~~ 479 (488)
T TIGR02299 472 KNVALALG 479 (488)
T ss_pred EEEEEecC
Confidence 99999873
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-97 Score=774.80 Aligned_cols=465 Identities=31% Similarity=0.477 Sum_probs=428.6
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||||+|+. ++..++++||+||+++++++.++.+++++++++|++||+. |+.+|..+|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (481)
T TIGR03216 1 IRNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDD 78 (481)
T ss_pred CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35899999986 4678999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|++++++|+|||..+++ .|+..+++.+++++..+....+..... ..+. ..+...+..++|+|||++|+|||||+.
T Consensus 79 la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~Pl~ 154 (481)
T TIGR03216 79 FLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEM---ATPD-GKGALNYAVRKPLGVVGVISPWNLPLL 154 (481)
T ss_pred HHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccc---cCCC-CCCceeEEEEeccceEEEECCCCcHHH
Confidence 99999999999999997 499999999999988776543332110 0010 112456788999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCch-hhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGS-EIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~-~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
+.++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+++|++. +++..|..||++|.|+|||| .+|+.
T Consensus 155 ~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~ 234 (481)
T TIGR03216 155 LMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSA 234 (481)
T ss_pred HHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998654 48889999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 235 i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 314 (481)
T TIGR03216 235 IMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGV 314 (481)
T ss_pred HHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 99887 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc--------CCCceeecEEEeeCCCCCCCcccccccceeeeE
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK--------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 398 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 398 (494)
| ++++++||++++.+++++++++++|+++|+++..|+. .+|+|++|||+.+++++|++++||+||||++|+
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~ 394 (481)
T TIGR03216 315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIA 394 (481)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 9 7899999999999999999999999999999954332 258999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhc
Q 011080 399 RINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478 (494)
Q Consensus 399 ~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~ 478 (494)
+|+|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++|++
T Consensus 395 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~f~~ 473 (481)
T TIGR03216 395 PFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRD-LRTPFGGSKLSGIGREGGVHSLEFYTE 473 (481)
T ss_pred EeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCC-CCCCcCCcccCcCCcCchHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999877654 448999999999999999999999999
Q ss_pred eeEEEEe
Q 011080 479 IKSTVIN 485 (494)
Q Consensus 479 ~k~i~~~ 485 (494)
.|+|+++
T Consensus 474 ~k~v~~~ 480 (481)
T TIGR03216 474 LTNVCIK 480 (481)
T ss_pred eEEEEEe
Confidence 9999875
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-97 Score=771.44 Aligned_cols=462 Identities=28% Similarity=0.451 Sum_probs=430.7
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAE 95 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 95 (494)
+||||+|+.+. +..++++||+||+++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 68999998765 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHh
Q 011080 96 CLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVS 175 (494)
Q Consensus 96 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 175 (494)
++++|+|||+.+++.|+..+++.+++++...+++.+.... ....+...++.++|+|||++|+|||||+.+.++
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~-------~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 152 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP-------SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGW 152 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------cCCCCceEEEEEecceeEEEECCCCcHHHHHHH
Confidence 9999999999999999999999999998877765543211 111134567889999999999999999999999
Q ss_pred hHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHc----CCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 176 KIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 176 ~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~a----GlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
++++||++||+||+|||+.+|.++..++++|.++ |+|+|++++++|++. ++..|..||+++.|+|||| .+|+.+
T Consensus 153 ~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i 231 (478)
T cd07086 153 NAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRV 231 (478)
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999654 8899999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 232 ~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 311 (478)
T cd07086 232 GETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDP 311 (478)
T ss_pred HHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCC
Confidence 8876 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc--C---CCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK--R---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~--~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
++++++||++++.+++++.+++++|+++|+++..|+. . +|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 312 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~ 391 (478)
T cd07086 312 LDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDS 391 (478)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCC
Confidence 7789999999999999999999999999999964332 2 488999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhh--cccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDA--METGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~--~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+||||+++|+++|||+++|||+|.+++.+++++ +++|+|+||+.+......+||||+|.||+|+++|.+++++|++.|
T Consensus 392 ~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k 471 (478)
T cd07086 392 LEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceE
Confidence 999999999999999999999999999999999 999999999987654456899999999999999999999999999
Q ss_pred EEEEec
Q 011080 481 STVINL 486 (494)
Q Consensus 481 ~i~~~~ 486 (494)
+|++++
T Consensus 472 ~i~~~~ 477 (478)
T cd07086 472 TCTINY 477 (478)
T ss_pred EEEEeC
Confidence 998875
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=769.73 Aligned_cols=462 Identities=34% Similarity=0.531 Sum_probs=429.5
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||||+|+.+. ..++++||+ ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999998753 347999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++....++.+.... ....+...++.++|+|||++|+|||||+.+
T Consensus 79 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~-------~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~ 151 (473)
T cd07097 79 LARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLP-------STRPGVEVETTREPLGVVGLITPWNFPIAI 151 (473)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------cCCCCceEEEEEEeeeeEEEEcccChHHHH
Confidence 9999999999999999999999999999999877766543211 111234568899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.+.
T Consensus 152 ~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 231 (473)
T cd07097 152 PAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIA 231 (473)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977789999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 232 ~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 311 (473)
T cd07097 232 AAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDAL 311 (473)
T ss_pred HHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCC
Confidence 876 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++++||++++.+++++.+++++++++|+++. +|.. ..|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 889999999999999999999999999999995 4422 24789999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC-CcchHHHHHHhhceeEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG-SQGITNSINMMTKIKST 482 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i 482 (494)
||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++......+||||+|.||+| +++|.+|+++|++.|+|
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v 471 (473)
T cd07097 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471 (473)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999999876544345899999999999 89999999999999998
Q ss_pred EE
Q 011080 483 VI 484 (494)
Q Consensus 483 ~~ 484 (494)
++
T Consensus 472 ~~ 473 (473)
T cd07097 472 YV 473 (473)
T ss_pred eC
Confidence 53
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-96 Score=769.75 Aligned_cols=463 Identities=33% Similarity=0.508 Sum_probs=430.9
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH---HhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++ .|+.+|.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 46789999999876678899999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||..++ ..|+..+++.+++++..++++.+.... . ......+..++|+|||++|+||||
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVv~~I~p~N~ 157 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIP-------M-DGDFFTYTRHEPVGVCGQIIPWNF 157 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-------C-CCCceEEEEEeceeEEEEEccChh
Confidence 9999999999999999766 569999999999999887776553211 1 112356789999999999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+++..|+.||+++.|+|||| .+|
T Consensus 158 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g 237 (481)
T cd07141 158 PLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVG 237 (481)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 9999999999999999999999999999999999999999999999999999977788999999999999999999 999
Q ss_pred HHHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 248 ISISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 248 ~~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
+.+++.+ +++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|++++++++
T Consensus 238 ~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 317 (481)
T cd07141 238 KLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRV 317 (481)
T ss_pred HHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 9998865 3689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
+||| ++++++||++++.+++++.+++++|+++|+++..|+. ..|+|++|||+.++++++++++||+||||++|++|
T Consensus 318 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 397 (481)
T cd07141 318 VGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKF 397 (481)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEee
Confidence 9999 8899999999999999999999999999999954332 35899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++... ...+||||+|.||+|+++|.+++++||+.|
T Consensus 398 ~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 476 (481)
T cd07141 398 KTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVV-SPQAPFGGYKMSGNGRELGEYGLQEYTEVK 476 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCCCCcccCcCCccchHHHHHHHhheE
Confidence 9999999999999999999999999999999999999999999986654 345899999999999999999999999999
Q ss_pred EEEE
Q 011080 481 STVI 484 (494)
Q Consensus 481 ~i~~ 484 (494)
+|++
T Consensus 477 ~v~~ 480 (481)
T cd07141 477 TVTI 480 (481)
T ss_pred EEEE
Confidence 9876
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-96 Score=768.21 Aligned_cols=461 Identities=29% Similarity=0.419 Sum_probs=425.2
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999998766788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 94 AECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
+++++.|+|||+.+++ .|+..+++.+++++....+..+... +. ..+...++.++|+|||++|+|||||+.+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 152 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS-------EI-DENTVAYHFHEPLGVVGQIIPWNFPLLM 152 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeee-------cC-CCCceEEEEEeccceEEEECCCchHHHH
Confidence 9999999999999997 4999999999999887665433211 11 1234567889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.|.
T Consensus 153 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 231 (479)
T cd07116 153 ATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIM 231 (479)
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999998 9999999999977788999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCC------CCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcc
Q 011080 252 KKA--GMIPLQMELGGKDACIILED------ADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL 323 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~d------aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~ 323 (494)
+.+ .++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||++++|+|+++|+++++++
T Consensus 232 ~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 310 (479)
T cd07116 232 QYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAI 310 (479)
T ss_pred HHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence 877 47899999999999999998 79999999999865 6999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCccccccccee
Q 011080 324 TVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVL 395 (494)
Q Consensus 324 ~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 395 (494)
++|+| ++++.+||++++.+.+++++++++++++|++++ +|.. ..|+|+.|||+.+++ +|++++||+||||+
T Consensus 311 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl 389 (479)
T cd07116 311 KQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVL 389 (479)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceE
Confidence 99999 789999999999999999999999999999985 4322 258999999998874 99999999999999
Q ss_pred eeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHH
Q 011080 396 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475 (494)
Q Consensus 396 ~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~ 475 (494)
+|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.... ...+||||+|+||+|+++|.+|+++
T Consensus 390 ~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~ 468 (479)
T cd07116 390 AVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY-PAHAAFGGYKQSGIGRENHKMMLDH 468 (479)
T ss_pred EEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCCccCcCCccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999986654 3458999999999999999999999
Q ss_pred hhceeEEEEec
Q 011080 476 MTKIKSTVINL 486 (494)
Q Consensus 476 ~~~~k~i~~~~ 486 (494)
|++.|+|+++|
T Consensus 469 ~~~~k~~~~~~ 479 (479)
T cd07116 469 YQQTKNLLVSY 479 (479)
T ss_pred hhceEEEEEeC
Confidence 99999998754
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-96 Score=766.74 Aligned_cols=464 Identities=29% Similarity=0.458 Sum_probs=431.1
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+ ++..++++||+||+++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999875 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|++++++|+|||..+++ .|+..+++.+++++..++.+.+.... .. ..+...++.++|+|||++|+|||||+.
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~---~~----~~~~~~~~~r~P~GVv~~I~p~N~P~~ 153 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAG---EY----LEGHTSMIRRDPVGVVASIAPWNYPLM 153 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc---cC----CCCceeEEEEecceeEEEEccCChHHH
Confidence 99999999999999996 49999999999998877665443110 00 112345788999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|+++|++.+++..|..||+++.|+|||| .+|+.+
T Consensus 154 ~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i 232 (475)
T PRK13473 154 MAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232 (475)
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999977889999999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 233 ~~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p 312 (475)
T PRK13473 233 LSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDP 312 (475)
T ss_pred HHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9877 36999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcC-CEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKA-ATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++++||++++.+.+++.++|++++++| ++++.++. ..|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 392 (475)
T PRK13473 313 DDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDE 392 (475)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCH
Confidence 88999999999999999999999999999 99854432 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.+++.++++++++|+|+||++.... ..+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 393 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 393 DQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLV-SEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVM 471 (475)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCccccccCccchHHHHHHHhceEEEE
Confidence 99999999999999999999999999999999999999999877654 44899999999999999999999999999998
Q ss_pred Eec
Q 011080 484 INL 486 (494)
Q Consensus 484 ~~~ 486 (494)
+++
T Consensus 472 ~~~ 474 (475)
T PRK13473 472 VKH 474 (475)
T ss_pred Eec
Confidence 875
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-96 Score=763.56 Aligned_cols=459 Identities=28% Similarity=0.457 Sum_probs=422.2
Q ss_pred eeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHH
Q 011080 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAEC 96 (494)
Q Consensus 17 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 96 (494)
+|||+|+.+ +..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999874 467999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhh
Q 011080 97 LVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSK 176 (494)
Q Consensus 97 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 176 (494)
+++|+|||+.+++.|+..+++.+++++...+.+.+... +....+...++.++|+|||++|+|||||+.+++++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 152 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTI-------PSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWN 152 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccc-------cCCCCCceEEEEEecceeEEEEccCCCHHHHHHHH
Confidence 99999999999999999999999998876655433221 11112345578899999999999999999999999
Q ss_pred HHHHhhcCCEEEEcCCCCChHHHHHHHHH----HHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 177 IAPALIAGNSIVLKPPTQGAVAALHMVHC----FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 177 ~~~aL~aGN~vvlkps~~~~~t~~~l~~~----l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
+++||++||+||+|||+.+|.++.+++++ |.++|+|+|++|+++|+ .+.+..|++||++|.|+|||| .+|+.|.
T Consensus 153 ~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~ 231 (474)
T cd07130 153 AAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVG 231 (474)
T ss_pred hhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHH
Confidence 99999999999999999999999887765 57999999999999984 457899999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 232 ~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~ 311 (474)
T cd07130 232 QAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPL 311 (474)
T ss_pred HHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCC
Confidence 876 47899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
++++++||++++.+.+++.+++++|+++|++++.|+. .+|+|++|||+.++++ |++++||+||||++|++|+|+||
T Consensus 312 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~e 390 (474)
T cd07130 312 DDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEE 390 (474)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHH
Confidence 7789999999999999999999999999999964432 2589999999987766 99999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhh--cccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDA--METGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~--~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||+++|+++|||+++|||+|.+++.+++++ +++|+|+||..+......+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 391 AIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEE
Confidence 999999999999999999999999999987 999999999876555556899999999999999999999999999998
Q ss_pred Eec
Q 011080 484 INL 486 (494)
Q Consensus 484 ~~~ 486 (494)
+++
T Consensus 471 ~~~ 473 (474)
T cd07130 471 INY 473 (474)
T ss_pred Eec
Confidence 875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=761.77 Aligned_cols=464 Identities=34% Similarity=0.487 Sum_probs=430.8
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH-Hhc-CCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-SWA-KTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+ .+|..+|.++|+++++.|++++
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 6 PTGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 35789999999876677899999999999999999999999999999999998 599 9999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||..++ +.|+..+++.+++++.++.+..+.... . ..+...++.++|+|||++|+|||||
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~-------~-~~~~~~~~~~~P~GVv~~I~P~N~P 157 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIE-------T-DIKKLTYTRHEPIGVCGQIIPWNFP 157 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------C-CCCceEEEEEecceeEEEECCCcCh
Confidence 999999999999999665 569999999999999887665443211 1 1234567889999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+++..|..||++|.|+|||| .+|+
T Consensus 158 ~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~ 237 (481)
T cd07143 158 LLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGR 237 (481)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHH
Confidence 999999999999999999999999999999999999999999999999999977788999999999999999999 9999
Q ss_pred HHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 238 ~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 317 (481)
T cd07143 238 KVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKV 317 (481)
T ss_pred HHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCC
Confidence 998876 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+++++.+++++++++|+++..++. ..|+|+.|||+.++++++++++||+||||++|++|+
T Consensus 318 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 397 (481)
T cd07143 318 GDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFK 397 (481)
T ss_pred CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeC
Confidence 999 8899999999999999999999999999999964432 358999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|.+++++||+.|+
T Consensus 398 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 476 (481)
T cd07143 398 TEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLH-HQVPFGGYKQSGIGRELGEYALENYTQIKA 476 (481)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCC-CCCCCCCccccccCcccHHHHHHHHhCeEE
Confidence 9999999999999999999999999999999999999999999876544 458999999999999999999999999999
Q ss_pred EEEe
Q 011080 482 TVIN 485 (494)
Q Consensus 482 i~~~ 485 (494)
|+++
T Consensus 477 i~~~ 480 (481)
T cd07143 477 VHIN 480 (481)
T ss_pred EEEe
Confidence 9875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-95 Score=761.11 Aligned_cols=464 Identities=33% Similarity=0.516 Sum_probs=428.4
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
++||||+|.. ++..++++||+||+++++++.++.+|+++|+++|++++ +.++..+|.++|++++++|++++++|+
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999986 35689999999999999999999999999999999875 578999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeec-eeEEeeCCCCchHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPL-GVVLAIPPFNYPVNLA 173 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 173 (494)
+++++|+|||..+++.|+..+++.+++++..+.+..+..... ...+. ......++.++|+ |||++|+|||||+.+.
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~ 156 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSC--DLTPH-GKARKVFTQREPLLGVISAITPFNHPMNQV 156 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc--ccCCC-CCCceEEEEEcCCCCEEEEEcCCcHHHHHH
Confidence 999999999999999999999999999998776654432110 00011 1134567899998 9999999999999999
Q ss_pred HhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHH
Q 011080 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252 (494)
Q Consensus 174 ~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~ 252 (494)
++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.||+++.|+|||| .+|+.+++
T Consensus 157 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 157 AHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999 99999999
Q ss_pred HcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCC
Q 011080 253 KAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDD 331 (494)
Q Consensus 253 ~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~ 331 (494)
.++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| +++
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 316 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPS 316 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9888999999999999999999999999999999999999999999999999999999999999999999999999 789
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHh
Q 011080 332 CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411 (494)
Q Consensus 332 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 411 (494)
+++||++++.+.+++++++++++++|++++.++...|+|++|||+.+++++|++++||+||||++|++|+|+|||++++|
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN 396 (472)
T TIGR03250 317 VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISN 396 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999655545799999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC-CcchHHHHHHhhceeEEEEec
Q 011080 412 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG-SQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 412 ~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i~~~~ 486 (494)
+++|||+++|||+|.+++.++++++++|+|+||+.+......+||||+|+||+| +++|.+|+++|++.|+|++++
T Consensus 397 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 397 STAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLPW 472 (472)
T ss_pred CCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999999999877655445899999999999 678899999999999998764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-95 Score=761.02 Aligned_cols=459 Identities=35% Similarity=0.563 Sum_probs=427.5
Q ss_pred CeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 011080 20 GVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVK 99 (494)
Q Consensus 20 g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 99 (494)
|+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67887655678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHH
Q 011080 100 EIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAP 179 (494)
Q Consensus 100 e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ 179 (494)
|+|||..+++.|+..+++.+++++....+..+... +....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 153 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRIL-------PSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAP 153 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccc-------cCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 99999999999999999999999877665433211 11112345678899999999999999999999999999
Q ss_pred HhhcCCEEEEcCCCCChHHH-HHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--C
Q 011080 180 ALIAGNSIVLKPPTQGAVAA-LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--G 255 (494)
Q Consensus 180 aL~aGN~vvlkps~~~~~t~-~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~ 255 (494)
||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|++.+++..|+.||.++.|.|||| .+|+.+.+.+ .
T Consensus 154 ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 233 (465)
T cd07151 154 ALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRH 233 (465)
T ss_pred HHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999996 789999999999999999999977788999999999999999999 9999998876 4
Q ss_pred CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCC
Q 011080 256 MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDI 334 (494)
Q Consensus 256 ~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~ 334 (494)
.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+| ++++.+
T Consensus 234 ~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 313 (465)
T cd07151 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVV 313 (465)
T ss_pred CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999 779999
Q ss_pred CccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC
Q 011080 335 TPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN 414 (494)
Q Consensus 335 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 414 (494)
||++++.+.+++.+++++++++|++++.++...|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++
T Consensus 314 gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 314 GPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 99999999999999999999999999655555789999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 415 FGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 415 ~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
|||+++|||+|.+++.++++++++|+|+||+.+......+||||+|.||+|+++|++|+++|++.|+++++
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999999998765445589999999999999999999999999999874
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=764.25 Aligned_cols=464 Identities=33% Similarity=0.518 Sum_probs=430.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH-hcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS-WAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++. |+.+|.++|.++|+++++.|+++++
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 86 (484)
T cd07144 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRD 86 (484)
T ss_pred CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 356899999998656678999999999999999999999999999999999996 8899999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
+|++++++|+|||..++ ..|+..+++.++++++.++++.+... +. ..+...+..++|+|||++|+|||||+
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~-------~~-~~~~~~~~~~~P~GvV~~I~p~N~P~ 158 (484)
T cd07144 87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTI-------PT-SPNKLAYTLHEPYGVCGQIIPWNYPL 158 (484)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-------cC-CCCceEEEEEecceEEEEECcCCCHH
Confidence 99999999999999775 67999999999999988777644321 11 12345678899999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.++++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.++.|..||+++.|+|||| .+|+.
T Consensus 159 ~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~ 238 (484)
T cd07144 159 AMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRL 238 (484)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977789999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc-cccC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK-LTVG 326 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g 326 (494)
+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.+ +++|
T Consensus 239 i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G 318 (484)
T cd07144 239 VMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVG 318 (484)
T ss_pred HHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcC
Confidence 99876 47999999999999999999999999999999999999999999999999999999999999999985 8999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc-----CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
+| ++++++||++++.+.+++.+++++++++|++++ ++.. ..|+|++|||+.++++++++++||+||||++|++
T Consensus 319 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~ 398 (484)
T cd07144 319 SPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISK 398 (484)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEec
Confidence 99 889999999999999999999999999999985 4322 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+... ..+||||+|+||+|+++|.+|+++||+.
T Consensus 399 ~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~t~~ 477 (484)
T cd07144 399 FKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSD-VGVPFGGFKMSGIGRELGEYGLETYTQT 477 (484)
T ss_pred cCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCC-CCCCcCCcccCcCCCCchHHHHHHhhce
Confidence 999999999999999999999999999999999999999999999876544 4489999999999999999999999999
Q ss_pred eEEEEe
Q 011080 480 KSTVIN 485 (494)
Q Consensus 480 k~i~~~ 485 (494)
|+|+++
T Consensus 478 k~v~~~ 483 (484)
T cd07144 478 KAVHIN 483 (484)
T ss_pred EEEEEe
Confidence 999875
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=764.45 Aligned_cols=462 Identities=31% Similarity=0.502 Sum_probs=431.4
Q ss_pred eeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 17 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
||||+|..+.++..++++||+||+++++++.++.++++++++.|++|++ .|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999998766677899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
+++++|+|||..+++.|+..+++.+++++...++..+.... . ..+...++.++|+|||++|+|||||+.+.+
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~ 152 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD-------V-PPHVISRTVREPVGVCGLITPWNYPLLQAA 152 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------C-CCCceEEEEEeeeeeEEEEcCCchHHHHHH
Confidence 99999999999999999999999999998887764443211 1 123457799999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|++++++.+.+..|+.||+++.|+|||| .+|+.+.+.
T Consensus 153 ~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 153 WKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977778999999999999999999 999999987
Q ss_pred c--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 254 A--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 254 a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+| ++
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~ 312 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDA 312 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 6 47899999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++||++++.+.+++++++++++++|++++ +|.. ..|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus 313 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 392 (482)
T cd07119 313 DTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTE 392 (482)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCH
Confidence 9999999999999999999999999999995 4322 15899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 393 deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 471 (482)
T cd07119 393 EEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYF-AEAPWGGYKQSGIGRELGPTGLEEYQETKHIN 471 (482)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCcCCcccCcCCccchHHHHHHHhceEEEE
Confidence 99999999999999999999999999999999999999999875544 44899999999999999999999999999999
Q ss_pred EecC
Q 011080 484 INLP 487 (494)
Q Consensus 484 ~~~~ 487 (494)
+++.
T Consensus 472 ~~~~ 475 (482)
T cd07119 472 INLS 475 (482)
T ss_pred EecC
Confidence 9863
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=765.96 Aligned_cols=474 Identities=26% Similarity=0.373 Sum_probs=433.0
Q ss_pred cccccccCCcccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHH
Q 011080 4 FEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82 (494)
Q Consensus 4 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~ 82 (494)
|.++......+++||||+|+.+ ++..++++||+| |+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++
T Consensus 22 ~~~~~~~~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~ 100 (533)
T TIGR01236 22 LKELKSHPIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKA 100 (533)
T ss_pred HHHHhhcCeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 4455566678899999999874 456899999997 89999999999999999999999999999999999999999999
Q ss_pred HHHHH-HcHHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeec-ee
Q 011080 83 AAILK-EQKAPIAECLVKEIAKPAKDAVTE-VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPL-GV 159 (494)
Q Consensus 83 a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GV 159 (494)
++.|+ +++++|+++++.|+|||+.+++.| +..+++.+++++..+.++.+.... ....+...++.++|+ ||
T Consensus 101 a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~-------~~~~~~~~~~~~~P~~GV 173 (533)
T TIGR01236 101 ADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPS-------ESAPGEWNRTDYRPLEGF 173 (533)
T ss_pred HHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCcccc-------CCCCCceeEEEEecCCCE
Confidence 99999 599999999999999999999986 999999999999887776544210 001134568889999 99
Q ss_pred EEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEE
Q 011080 160 VLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCI 239 (494)
Q Consensus 160 v~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v 239 (494)
|++|+|||||+....+++++|| +||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++.++++.|+.||+++.|
T Consensus 174 v~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V 252 (533)
T TIGR01236 174 VYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGI 252 (533)
T ss_pred EEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEE
Confidence 9999999999999999999999 799999999999999999999999999999999999999777899999999999999
Q ss_pred EEecc-HHHHHHHHHcC--CC------ceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHH
Q 011080 240 SFTGG-DTGISISKKAG--MI------PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310 (494)
Q Consensus 240 ~ftGs-~~~~~v~~~a~--~~------~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~ 310 (494)
+|||| .+|+.|.+.++ .+ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||
T Consensus 253 ~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d 332 (533)
T TIGR01236 253 HFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWP 332 (533)
T ss_pred EEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHH
Confidence 99999 99999988763 43 49999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcC--CEEe-eccc--CCCceeecEEEeeCCCCCC
Q 011080 311 TLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKA--ATFC-QEYK--REGNLIWPLLLDNVRPDMR 384 (494)
Q Consensus 311 ~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~v~-~~~~--~~g~~~~Ptvl~~~~~~~~ 384 (494)
+|+++|+++++++++|+| ++++++||++++.+++++.+++++++++| ++++ +|.. ..|+|++|||+.+++++|+
T Consensus 333 ~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~ 412 (533)
T TIGR01236 333 RFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDP 412 (533)
T ss_pred HHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCCh
Confidence 999999999999999999 78999999999999999999999999987 6885 4432 2489999999999999999
Q ss_pred CcccccccceeeeEecCC--HHHHHHHH-hcCCCCceEEEeccCHHHHHHHHhhcc--cceEEECCCCCCC-CCCCCccC
Q 011080 385 IAWEEPFGPVLPVIRINS--VEEGIHHC-NASNFGLQGCVFTRDINKAILISDAME--TGTVQINSAPSRG-PDHFPFQG 458 (494)
Q Consensus 385 ~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~s~d~~~~~~~~~~~~--~g~v~iN~~~~~~-~~~~pfgG 458 (494)
+++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+.+++++++ +|+|+||+.+... ....||||
T Consensus 413 i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG 492 (533)
T TIGR01236 413 LMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGG 492 (533)
T ss_pred hhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCC
Confidence 999999999999999999 49999999 889999999999999999999999977 9999999876543 24589999
Q ss_pred ccCCCCC-CcchHHHHHHhhceeEEEEec
Q 011080 459 LKDSGIG-SQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 459 ~~~SG~g-~~~g~~~l~~~~~~k~i~~~~ 486 (494)
+|.||+| +++|.+|+++|++.|+++.+.
T Consensus 493 ~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 493 ARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 9999998 999999999999999998775
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-95 Score=756.63 Aligned_cols=447 Identities=27% Similarity=0.428 Sum_probs=417.6
Q ss_pred CeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHH
Q 011080 29 KSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108 (494)
Q Consensus 29 ~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 108 (494)
++++++||+||+++++++.++.+++++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+|||..++
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA 86 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEE
Q 011080 109 VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188 (494)
Q Consensus 109 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vv 188 (494)
+.|+..+++.+++++..+.++.+.... . ..+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 87 ~~ev~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv 158 (462)
T PRK13968 87 RAEVAKSANLCDWYAEHGPAMLKAEPT------L--VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYL 158 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccc------c--CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999887776543211 0 12345688999999999999999999999999999999999999
Q ss_pred EcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCC
Q 011080 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGG 265 (494)
Q Consensus 189 lkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG 265 (494)
+|||+.+|.++..++++|.++|+|+|++|+++|++.. ...|+.||+++.|+|||| .+|+.+++.+ .++|+++|+||
T Consensus 159 ~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGG 237 (462)
T PRK13968 159 LKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGG 237 (462)
T ss_pred EECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCC
Confidence 9999999999999999999999999999999986544 445889999999999999 9999999887 48999999999
Q ss_pred cceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHH
Q 011080 266 KDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSAN 344 (494)
Q Consensus 266 ~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~ 344 (494)
|||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++||| ++++++||++++.+++
T Consensus 238 k~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~ 317 (462)
T PRK13968 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRD 317 (462)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 7899999999999999
Q ss_pred HHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEE
Q 011080 345 FIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421 (494)
Q Consensus 345 ~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 421 (494)
++.+++++++.+|++++ +|.. .+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 318 ~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v 397 (462)
T PRK13968 318 ELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATI 397 (462)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEE
Confidence 99999999999999995 4432 24899999999999999999999999999999999999999999999999999999
Q ss_pred eccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 422 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+|.+.+.++++++++|+|+||+..... ..+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 398 ~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 398 FTTDETQARQMAARLECGGVFINGYCASD-ARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999876544 4489999999999999999999999999999775
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-95 Score=765.95 Aligned_cols=464 Identities=31% Similarity=0.514 Sum_probs=431.6
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+.+ +..++++||+| |+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 56789999999863 46899999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||..+++.|+..+++.+++++..+.++.+... +. ..+...++.++|+|||++|+|||||+
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVv~~I~pwN~P~ 180 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPV-------EM-VPGEDNRYVYRPLGVGAVISPWNFPL 180 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cC-CCCceeEEEEecceEEEEECCCChHH
Confidence 99999999999999999999999999999999988877733321 11 11345688999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++.+++..|..||+++.|+|||| .+|+.
T Consensus 181 ~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~ 260 (512)
T cd07124 181 AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLR 260 (512)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999987788999999999999999999 99999
Q ss_pred HHHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
+.+.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 261 i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 340 (512)
T cd07124 261 IYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTK 340 (512)
T ss_pred HHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHH
Confidence 988652 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc-C---CCceeecEEEeeCCCCCCCccccccccee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-R---EGNLIWPLLLDNVRPDMRIAWEEPFGPVL 395 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 395 (494)
++++||| ++++++||++++.+.+++.++|+++++ |++++ +|.. . +|+|++|||+.++++++++++||+||||+
T Consensus 341 ~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 419 (512)
T cd07124 341 ALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVL 419 (512)
T ss_pred hCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeE
Confidence 9999999 788999999999999999999999988 88885 4322 2 58999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCC-CcchHHHH
Q 011080 396 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIG-SQGITNSI 473 (494)
Q Consensus 396 ~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g-~~~g~~~l 473 (494)
+|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+... ...+||||+|+||+| +++|.+|+
T Consensus 420 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~ 499 (512)
T cd07124 420 AVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYL 499 (512)
T ss_pred EEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHH
Confidence 9999999999999999999999999999999999999999999999999876533 244899999999999 88999999
Q ss_pred HHhhceeEEEEec
Q 011080 474 NMMTKIKSTVINL 486 (494)
Q Consensus 474 ~~~~~~k~i~~~~ 486 (494)
++||+.|+|++++
T Consensus 500 ~~~t~~k~v~~~~ 512 (512)
T cd07124 500 LQFMQPKTVTENF 512 (512)
T ss_pred HHhccEEEEEEeC
Confidence 9999999998874
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-95 Score=761.59 Aligned_cols=464 Identities=34% Similarity=0.595 Sum_probs=431.8
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
+||||+|+.+.++.+++++||+| ++++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999998765678899999998 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
+++++|+|||+.+++.|+..+++.+++++...++..+... +........+.+++|+|||++|+|||||+.+.+
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 153 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETV-------PSELPNKDAMTRRQPIGVVALITPWNFPVAIPS 153 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccc-------ccCCCCceEEEEeeceeEEEEECCcCcHHHHHH
Confidence 9999999999999999999999999999887776544321 111113356889999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+++..|..||+++.|+|||| .+|+.+.+.
T Consensus 154 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 233 (478)
T cd07131 154 WKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233 (478)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977778999999999999999999 999999887
Q ss_pred c--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 254 A--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 254 a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+ ..+|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++++|+++|+++++++++|+| ++
T Consensus 234 aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 234 CARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred HhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 6 47999999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++||++++.+.+++.+++++|+++|++++.|+. .+|+|++|||+.+++++++++++|+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999954332 35899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC-CcchHHHHHHhhceeEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG-SQGITNSINMMTKIKST 482 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i 482 (494)
||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+......+||||+|+||+| +++|.+|+++|++.|+|
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i 473 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEE
Confidence 99999999999999999999999999999999999999999887654456899999999999 88899999999999999
Q ss_pred EEec
Q 011080 483 VINL 486 (494)
Q Consensus 483 ~~~~ 486 (494)
++++
T Consensus 474 ~~~~ 477 (478)
T cd07131 474 YVDY 477 (478)
T ss_pred EEeC
Confidence 8874
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-95 Score=760.26 Aligned_cols=464 Identities=28% Similarity=0.478 Sum_probs=431.3
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
...++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 97 (494)
T PRK09847 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH 97 (494)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 456789999998776678899999999999999999999999999999999997 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||+.++. .|+..+++.+++++..++++.++... . ..+...++.++|+|||++|+||||
T Consensus 98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVv~~I~PwN~ 169 (494)
T PRK09847 98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVAT-------T-SSHELAMIVREPVGVIAAIVPWNF 169 (494)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------C-CCCceeEEEecceeEEEEECCCcc
Confidence 99999999999999999885 59999999999999888777654321 1 113445789999999999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.||+++.|+|||| .+|
T Consensus 170 P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g 249 (494)
T PRK09847 170 PLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTG 249 (494)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999999999999999999977888999999999999999999 999
Q ss_pred HHHHHHc---CCCceEEecCCcceEEEeCCC-CHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcc
Q 011080 248 ISISKKA---GMIPLQMELGGKDACIILEDA-DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL 323 (494)
Q Consensus 248 ~~v~~~a---~~~~~~le~gG~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~ 323 (494)
+.+.+.+ ..+|+++|+|||||+||.+|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 250 ~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 329 (494)
T PRK09847 250 KQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329 (494)
T ss_pred HHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 9998865 469999999999999999997 999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-ecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 324 TVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 324 ~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
++|+| ++++.+||++++.+.+++.++|++++++| +++ +|. ...++|++|||+.++++++++++||+||||++|++|
T Consensus 330 ~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 408 (494)
T PRK09847 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRF 408 (494)
T ss_pred CCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEec
Confidence 99999 78999999999999999999999999999 774 443 234789999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+... ...||||+|.||+|+++|.+|+++||+.|
T Consensus 409 ~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~ft~~k 487 (494)
T PRK09847 409 TSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGD-MTVPFGGYKQSGNGRDKSLHALEKFTELK 487 (494)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCCcccccCccchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999976544 44899999999999999999999999999
Q ss_pred EEEEe
Q 011080 481 STVIN 485 (494)
Q Consensus 481 ~i~~~ 485 (494)
+|+++
T Consensus 488 ~v~~~ 492 (494)
T PRK09847 488 TIWIS 492 (494)
T ss_pred EEEEe
Confidence 99774
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-95 Score=757.65 Aligned_cols=455 Identities=31% Similarity=0.531 Sum_probs=424.6
Q ss_pred eeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHH
Q 011080 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAEC 96 (494)
Q Consensus 17 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 96 (494)
||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 79999997666788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHh
Q 011080 97 LVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVS 175 (494)
Q Consensus 97 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 175 (494)
+++|+|||..++ ..|+..+++.+++++..+.+..+... +... ....+..++|+|||++|+|||||+.+.++
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-------~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~ 152 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEII-------PLPI-PSFSYTIREPLGVCVGIGAWNYPLQIASW 152 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccc-------cCCC-CceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 999999999999 67999999999999887766443321 1111 13457889999999999999999999999
Q ss_pred hHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc
Q 011080 176 KIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA 254 (494)
Q Consensus 176 ~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a 254 (494)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.++++.|+.||+++.|+|||| .+|+.+.+.+
T Consensus 153 ~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 153 KIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999977789999999999999999999 9999999987
Q ss_pred --CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCC
Q 011080 255 --GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDD 331 (494)
Q Consensus 255 --~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~ 331 (494)
.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| +++
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999 889
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 332 CDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 332 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
+++||++++.+.+++.+++++++++|++++ ++.. ..|+|++|||+.++++++++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 999999999999999999999999999995 4322 248999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
|||+++|+++|||+++|||+|.+++.++++++++|+|+||++.... ...||||+|+||+|+++|.+|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYP-AEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999876544 44899999999999999999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-95 Score=757.87 Aligned_cols=460 Identities=35% Similarity=0.572 Sum_probs=429.2
Q ss_pred eeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHH
Q 011080 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAEC 96 (494)
Q Consensus 17 ~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 96 (494)
||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 79999987666788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhh
Q 011080 97 LVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSK 176 (494)
Q Consensus 97 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 176 (494)
+++|+|||..+++.|+..+++.+++++..+.+..+... +....+...+.+++|+|||++|+|||||+.+.+++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 153 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEII-------PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARK 153 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccc-------cCccccceeEEEEecceeEEEEccCchHHHHHHHH
Confidence 99999999999999999999999999887766544321 11111345678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc-
Q 011080 177 IAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA- 254 (494)
Q Consensus 177 ~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a- 254 (494)
+++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..||+++.|+|||| .+|+.+.+.+
T Consensus 154 ~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 233 (468)
T cd07088 154 LAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233 (468)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778899999999999999999 9999998876
Q ss_pred -CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCC
Q 011080 255 -GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDC 332 (494)
Q Consensus 255 -~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~ 332 (494)
..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++
T Consensus 234 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 313 (468)
T cd07088 234 ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAAT 313 (468)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHH
Q 011080 333 DITPVVTESSANFIEGLVMDAKQKAATFC-QEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 408 (494)
Q Consensus 333 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 408 (494)
.+||++++.+.+++.+++++++++|++++ ++.. ..|+|++|||+.++++++.++++|+||||++|++|+|+||||+
T Consensus 314 ~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 393 (468)
T cd07088 314 DMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIE 393 (468)
T ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHH
Confidence 99999999999999999999999999995 4432 2589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 409 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 409 ~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
++|+++|||+++|||+|.+.+.++++++++|+|+||++..... ..||||+|.||+|+++|++|+++||+.|+|++
T Consensus 394 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~-~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 394 LANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAM-QGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCC-CCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999999999999998876543 36999999999999999999999999999853
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-95 Score=751.85 Aligned_cols=447 Identities=31% Similarity=0.460 Sum_probs=416.6
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++..+.++.+..... .........++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~K 157 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPAD-----AAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLK 157 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccc-----ccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999999888776543110 0001123567889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcc
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKD 267 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~ 267 (494)
||+.+|.++.+|+++|.++|+|+|++|++.+ +.+.+..|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+||||
T Consensus 158 ps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~ 236 (457)
T PRK09406 158 HASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSD 236 (457)
T ss_pred CCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCC
Confidence 9999999999999999999999999999986 3456788999999999999999 9999998876 4799999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 268 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 237 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~ 316 (457)
T PRK09406 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEV 316 (457)
T ss_pred eeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 011080 347 EGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s 423 (494)
.+++++++++|++++ +|.. .+|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (457)
T PRK09406 317 EKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWT 396 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999999995 4432 3589999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+|.+.+.++++++++|+|+||+.+...+ .+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~-~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 397 RDEAEQERFIDDLEAGQVFINGMTVSYP-ELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCC-CCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999876544 48999999999999999999999999999865
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-95 Score=758.57 Aligned_cols=463 Identities=33% Similarity=0.498 Sum_probs=429.4
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhc--CCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWA--KTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~--~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..++||||+|+.+.++..++++||+||+++++++.++.++++.++++|++|++.|+ .+|..+|.++|+++++.|.+++
T Consensus 3 ~~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07091 3 PTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDR 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 36789999998766678899999999999999999999999999999999999854 9999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||..++ ..|+..+++.+++++...++..+... +. ..+...++.++|+|||++|+|||||
T Consensus 83 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVv~~I~p~N~P 154 (476)
T cd07091 83 DELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTI-------PI-DGNFLAYTRREPIGVCGQIIPWNFP 154 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cC-CCCceEEEEEeceeEEEEECCCcCH
Confidence 999999999999999665 56999999999999887766544321 11 1245567899999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++|++++.+++..|..||++|.|+|||| .+|+
T Consensus 155 ~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~ 234 (476)
T cd07091 155 LLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGR 234 (476)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHH
Confidence 999999999999999999999999999999999999999999999999999977788999999999999999999 9999
Q ss_pred HHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 235 ~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~ 314 (476)
T cd07091 235 TIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVV 314 (476)
T ss_pred HHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCC
Confidence 999876 45899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEee-ccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-EYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+.+++.+++++++++|++++. |.. ..|+|++|||+.++++++++++||+||||++|++|+
T Consensus 315 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 394 (476)
T cd07091 315 GDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFK 394 (476)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecC
Confidence 999 8899999999999999999999999999999954 332 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+... ..+||||+|.||+|+++|.+|+++|++.|+
T Consensus 395 ~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~ 473 (476)
T cd07091 395 TEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFD-AAVPFGGFKQSGFGRELGEEGLEEYTQVKA 473 (476)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCcCCcccCcCCccchHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999999876544 458999999999999999999999999999
Q ss_pred EEE
Q 011080 482 TVI 484 (494)
Q Consensus 482 i~~ 484 (494)
|++
T Consensus 474 ~~~ 476 (476)
T cd07091 474 VTI 476 (476)
T ss_pred EeC
Confidence 853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-95 Score=760.58 Aligned_cols=465 Identities=30% Similarity=0.502 Sum_probs=429.6
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+.+ +..+.++||+ ||+++++++.++.++++++++.|++|++.|+.+|..+|.++|+++++.|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRR 108 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 35578999999874 3569999999 59999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.+++++..++++.+.... ....+...++.++|+|||++|+|||||+
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~P~GVV~~I~P~N~P~ 181 (511)
T TIGR01237 109 HELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVN-------LDIEGETNRYFYQPRGVAVVISPWNFPM 181 (511)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------CCCCCceeEEEEecceeEEEECCCCcHH
Confidence 999999999999999999999999999999999888776653211 0011345678899999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.++++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.||+++.|.|||| .+|+.
T Consensus 182 ~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~ 261 (511)
T TIGR01237 182 AIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCR 261 (511)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999977789999999999999999999 99999
Q ss_pred HHHHc--------CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKA--------GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a--------~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 262 i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~ 341 (511)
T TIGR01237 262 IYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATR 341 (511)
T ss_pred HHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHH
Confidence 98765 3689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc--CCCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
++++|+| ++.+++||++++.+.+++.+++++++++| ++ .++.. ..|+|++|||+.+++++|++++||+||||++|
T Consensus 342 ~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v 420 (511)
T TIGR01237 342 SLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAI 420 (511)
T ss_pred hCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEE
Confidence 9999999 78999999999999999999999999999 55 44432 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCCC-cchHHHHHH
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIGS-QGITNSINM 475 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~-~~g~~~l~~ 475 (494)
++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+... ....||||+|.||+|+ .+|.+++++
T Consensus 421 ~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~ 500 (511)
T TIGR01237 421 IRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQ 500 (511)
T ss_pred EeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999987643 3348999999999995 799999999
Q ss_pred hhceeEEEEec
Q 011080 476 MTKIKSTVINL 486 (494)
Q Consensus 476 ~~~~k~i~~~~ 486 (494)
||+.|+|+.++
T Consensus 501 ~~~~k~v~~~~ 511 (511)
T TIGR01237 501 FMQPKTVTENI 511 (511)
T ss_pred hcceEEEEEeC
Confidence 99999998764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-95 Score=755.83 Aligned_cols=454 Identities=31% Similarity=0.491 Sum_probs=424.8
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAE 95 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 95 (494)
+||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999876667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 96 CLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 96 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
++++|+|||..+++ .|+..+++.+++++...+.+.... .....+..++|+|||++|+|||||+.+++
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 148 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE------------RRGNSLVVREPIGVCGLITPWNWPLNQIV 148 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc------------cCceEEEEEeecceEEEECCCccHHHHHH
Confidence 99999999999986 589999999999987766543321 02345678999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.+.+.
T Consensus 149 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 228 (466)
T cd07138 149 LKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228 (466)
T ss_pred HHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987789999999999999999999 999999988
Q ss_pred cC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 254 AG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 254 a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+. ++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++||| ++
T Consensus 229 aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 308 (466)
T cd07138 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDP 308 (466)
T ss_pred HhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 74 7999999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
++++||++++.+.+++.+++++++++|++++.++. ..|+|++|||+.++++++++++||+||||++|++|+|+|
T Consensus 309 ~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ 388 (466)
T cd07138 309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDED 388 (466)
T ss_pred CCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHH
Confidence 99999999999999999999999999999954331 248999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.. . ...+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 389 eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~-~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 389 EAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-F-NPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-C-CCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999999999999999999999999999999864 2 345899999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-94 Score=754.96 Aligned_cols=463 Identities=29% Similarity=0.450 Sum_probs=428.6
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999876566789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
++++.|+|||+.+++.|+..+++.+++++.......+.... ....+...+..++|+|||++|+|||||+.+.+
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~ 154 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETST-------QVATRVDVYSIRQPLGVCAGITPFNFPAMIPL 154 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------cCCCCceEEEEEcccceEEEEccCChHHHHHH
Confidence 99999999999999999999999999988776655443211 11123456788999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++| +.+.+..|+.||+|+.|+|||| .+|+.+.+.
T Consensus 155 ~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~ 233 (477)
T TIGR01722 155 WMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTT 233 (477)
T ss_pred HHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 4567889999999999999999 999999887
Q ss_pred c--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 254 A--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 254 a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+ ..||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+| ++
T Consensus 234 a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~ 312 (477)
T TIGR01722 234 GSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDP 312 (477)
T ss_pred HHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 6 478999999999999999999999999999999999999999999999999998 9999999999999999999 88
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++||++++.+.+++.+++++|+++|++++.++. .+|+|++|||+.++++++.++++|+||||++|++|+|+
T Consensus 313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 99999999999999999999999999999964332 24899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--CcchHHHHHHhhceeE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMTKIKS 481 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~k~ 481 (494)
||||+++|+++|||+++|||+|.+.++++++++++|.|+||++.......+||||+|+||+| +++|.+++++||+.|+
T Consensus 393 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~ 472 (477)
T TIGR01722 393 EEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKT 472 (477)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeE
Confidence 99999999999999999999999999999999999999999865544455899999999999 5889999999999999
Q ss_pred EEEec
Q 011080 482 TVINL 486 (494)
Q Consensus 482 i~~~~ 486 (494)
|++++
T Consensus 473 i~~~~ 477 (477)
T TIGR01722 473 VTTRW 477 (477)
T ss_pred EEEeC
Confidence 98763
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-94 Score=759.99 Aligned_cols=464 Identities=25% Similarity=0.379 Sum_probs=424.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHH-c
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKE-Q 89 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~-~ 89 (494)
..+.+||||+|+.+ +.+++++||+ ||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++ +
T Consensus 31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 35778999999864 5689999999 499999999999999999999999999999999999999999999999996 8
Q ss_pred HHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeec-eeEEeeCCCC
Q 011080 90 KAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPL-GVVLAIPPFN 167 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n 167 (494)
+++|++++++|+|||+.+++. |+...++.+++++..+.++.+.... .. ..+...++.++|+ |||++|+|||
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~------~~-~~~~~~~~~~~P~~GVv~~I~PwN 181 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPL------SS-PAGVWNRLEYRPLEGFVYAVSPFN 181 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcccc------CC-CCCceeEEEEecCCceEEEECCcc
Confidence 999999999999999999964 7888999999998887776544211 11 1134567899998 9999999999
Q ss_pred chHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 168 YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 168 ~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
||+.+..+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+
T Consensus 182 fP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~ 260 (522)
T cd07123 182 FTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPT 260 (522)
T ss_pred cHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHH
Confidence 99999999999999 59999999999999999999999999999999999999977788999999999999999999 99
Q ss_pred HHHHHHHcC--CC------ceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHH
Q 011080 247 GISISKKAG--MI------PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318 (494)
Q Consensus 247 ~~~v~~~a~--~~------~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 318 (494)
|+.+.+.++ ++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++
T Consensus 261 G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~ 340 (522)
T cd07123 261 FKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLE 340 (522)
T ss_pred HHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence 999998763 44 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHc-CCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccc
Q 011080 319 KVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQK-AATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGP 393 (494)
Q Consensus 319 ~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 393 (494)
+++++++|+| ++++++||++++.+.+++.+++++++++ |++++.|+. ..|+|++|||+.+++++|++++||+|||
T Consensus 341 ~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGP 420 (522)
T cd07123 341 ELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGP 420 (522)
T ss_pred HHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCC
Confidence 9999999999 7899999999999999999999999999 999964432 2489999999999999999999999999
Q ss_pred eeeeEecCC--HHHHHHHHhcCC-CCceEEEeccCHHHHHHHHhhc--ccceEEECCCCCCC-CCCCCccCccCCCCC-C
Q 011080 394 VLPVIRINS--VEEGIHHCNASN-FGLQGCVFTRDINKAILISDAM--ETGTVQINSAPSRG-PDHFPFQGLKDSGIG-S 466 (494)
Q Consensus 394 vl~v~~~~~--~~eai~~~n~~~-~gl~a~v~s~d~~~~~~~~~~~--~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g-~ 466 (494)
|++|++|+| +||+|+++|++. |||++||||+|.+.+.++++++ ++|+|+||+.+... ...+||||+|.||+| +
T Consensus 421 Vl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~ 500 (522)
T cd07123 421 VLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDK 500 (522)
T ss_pred eEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcc
Confidence 999999995 799999999985 9999999999999999999996 59999999876543 345899999999996 9
Q ss_pred cchHHHHHHhhceeEEEEe
Q 011080 467 QGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 467 ~~g~~~l~~~~~~k~i~~~ 485 (494)
++|.+++++|++.|+++++
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 9999999999999998765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-94 Score=753.55 Aligned_cols=460 Identities=27% Similarity=0.407 Sum_probs=423.7
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
.+||||+|..+ ++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 47999999875 35679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
+++++|+|||..+++.|+..+++.+++++....++.+.... . ..+...+++++|+|||++|+|||||+.+.+
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 152 (487)
T PRK09457 81 EVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS----E----MADGAAVLRHRPHGVVAVFGPYNFPGHLPN 152 (487)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec----c----CCCceeEEEEeccEEEEEECCCchHHHHHH
Confidence 99999999999999999999999999888776665543211 0 113456888999999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.+..|+.||+++.|+|||| .+|+.+.+.
T Consensus 153 ~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 231 (487)
T PRK09457 153 GHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQ 231 (487)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 5678999999999999999999 999999987
Q ss_pred cC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchH-HHHHHHHHHHHhccccCCC-
Q 011080 254 AG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA-DTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 254 a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~p- 328 (494)
+. .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||
T Consensus 232 aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~ 311 (487)
T PRK09457 232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWD 311 (487)
T ss_pred HhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCC
Confidence 42 467899999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
++.+++||++++.+.+++.+++++++++|++++ ++.. .+|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 312 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~d 390 (487)
T PRK09457 312 AEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFD 390 (487)
T ss_pred cCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHH
Confidence 357899999999999999999999999999985 4332 35799999999 699999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||+........+||||+|.||+|+++|..+ .+|++.|++++
T Consensus 391 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~ 469 (487)
T PRK09457 391 EAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASL 469 (487)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEE
Confidence 99999999999999999999999999999999999999998766554568999999999999999555 55999999998
Q ss_pred ec
Q 011080 485 NL 486 (494)
Q Consensus 485 ~~ 486 (494)
++
T Consensus 470 ~~ 471 (487)
T PRK09457 470 ES 471 (487)
T ss_pred ec
Confidence 85
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-94 Score=751.54 Aligned_cols=452 Identities=30% Similarity=0.467 Sum_probs=421.5
Q ss_pred cCCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 10 ENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 10 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
....+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|+++++.|+.+|..+|.++|+++++.|+++
T Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 97 (480)
T cd07111 18 HDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKH 97 (480)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 44577899999999765567899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||+.+++ .|+...++.++++....+...+ .+..++|+|||++|+||||
T Consensus 98 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~------------------~~~~~~P~GVV~~I~PwN~ 159 (480)
T cd07111 98 QRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT------------------ELAGWKPVGVVGQIVPWNF 159 (480)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------------CcccceecceEEEECCCcc
Confidence 99999999999999999998 4998888888887665543211 1245789999999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+.+.++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++ +.+..|+.||+++.|+|||| .+|
T Consensus 160 P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g 238 (480)
T cd07111 160 PLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVG 238 (480)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999999999999999999854 67899999999999999999 999
Q ss_pred HHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 248 ISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 248 ~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
+.+.+.+ .++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++
T Consensus 239 ~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~v 318 (480)
T cd07111 239 RALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRV 318 (480)
T ss_pred HHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 9998876 47999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|+| ++++++||++++.+.+++.+++++++++|+++..++. ..|+|++|||+.++++++++++||+||||++|++|+
T Consensus 319 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 398 (480)
T cd07111 319 GDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFR 398 (480)
T ss_pred CCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCC
Confidence 999 7899999999999999999999999999999964432 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... ...||||+|.||+|+++|.+|+++||+.|+
T Consensus 399 ~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 399 TAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFD-AAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999876644 348999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-94 Score=756.81 Aligned_cols=463 Identities=30% Similarity=0.496 Sum_probs=427.8
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+.+ +..++++||+ ||+++++++.++.+++++++++|++|++.|+.++..+|.++|++++++|++++
T Consensus 35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 112 (514)
T PRK03137 35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRK 112 (514)
T ss_pred cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 35678999999874 4679999999 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.+++++..+.++....... + ..+...+++++|+|||++|+|||||+
T Consensus 113 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~--~~g~~~~~~~~P~GVv~~I~PwN~P~ 185 (514)
T PRK03137 113 HEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-----S--RPGEHNRYFYIPLGVGVVISPWNFPF 185 (514)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-----C--CCCceEEEEEecCcEEEEECCCccHH
Confidence 9999999999999999999999999999999998887765322110 1 12345688999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.++++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++.++++.|+.||+++.|+|||| .+|+.
T Consensus 186 ~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~ 265 (514)
T PRK03137 186 AIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLR 265 (514)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999977788999999999999999999 99999
Q ss_pred HHHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
+.+.+. ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 266 i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~ 345 (514)
T PRK03137 266 IYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTK 345 (514)
T ss_pred HHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHH
Confidence 988763 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc--CCCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
++++||| ++. ++||++++.+.+++.+++++++++| ++ +++.. ..|+|++|||+.++++++++++||+||||++|
T Consensus 346 ~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~~-~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 423 (514)
T PRK03137 346 ELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAF 423 (514)
T ss_pred hCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEE
Confidence 9999999 666 9999999999999999999999885 66 44432 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCC-CcchHHHHHH
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIG-SQGITNSINM 475 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g-~~~g~~~l~~ 475 (494)
++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+... ...+||||+|.||+| +++|.+++++
T Consensus 424 ~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ 503 (514)
T PRK03137 424 IKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLL 503 (514)
T ss_pred EecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999876543 344899999999999 6899999999
Q ss_pred hhceeEEEEe
Q 011080 476 MTKIKSTVIN 485 (494)
Q Consensus 476 ~~~~k~i~~~ 485 (494)
||+.|+|+..
T Consensus 504 ft~~k~v~~~ 513 (514)
T PRK03137 504 FLQAKTVSEM 513 (514)
T ss_pred hceEEEEEEe
Confidence 9999998764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-94 Score=746.79 Aligned_cols=440 Identities=32% Similarity=0.514 Sum_probs=412.0
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++...++..+... +....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 153 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTI-------PSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPA 153 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccc-------cCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECC
Confidence 9999999999887766554321 111123455678899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCC-chhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcce
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGK-GSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDA 268 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~-~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~ 268 (494)
+.+|+++..++++|.++|+|+|++|+++|+ +.+.++.|+.||+++.|+|||| .+|+.+.+.+ ..+|+++|+|||||
T Consensus 154 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~ 233 (448)
T TIGR01780 154 EQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAP 233 (448)
T ss_pred ccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCe
Confidence 999999999999999999999999999997 6778899999999999999999 9999999977 37999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
+||++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||++++.+.+++.
T Consensus 234 ~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~ 313 (448)
T TIGR01780 234 FIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVE 313 (448)
T ss_pred eEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred HHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecc
Q 011080 348 GLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~ 424 (494)
++|++++++|++++.|+. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 314 ~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~ 393 (448)
T TIGR01780 314 KHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSR 393 (448)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECC
Confidence 999999999999964432 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 425 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
|.+.++++++++++|.|+||+..... ...||||+|+||+|+++|.+|+++|++.|
T Consensus 394 d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 394 DLATIWRVAEALEYGMVGINTGLISN-VVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred CHHHHHHHHHhCCccEEEECCCCCCC-CCCCCCCcccccCCccchHHHHHHHhccC
Confidence 99999999999999999999976544 44899999999999999999999999876
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-94 Score=750.68 Aligned_cols=458 Identities=32% Similarity=0.525 Sum_probs=424.6
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH--hcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
+||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++. |+.+|.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 589999987655678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 94 AECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
++++++|+|||..++. .|+..+++.+++++..++++...... +. ..+...++.++|+|||++|+|||||+.+
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~ 153 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERR------PG-SGGGHVLVRREPVGVVAAIVPWNAPLFL 153 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc------cC-CCCceEEEEEEeccEEEEEcCCchHHHH
Confidence 9999999999998875 59999999999999887765432211 11 1134567899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.+..|+.|++++.|+|||| .+|+.++
T Consensus 154 ~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~ 232 (471)
T cd07139 154 AALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIA 232 (471)
T ss_pred HHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 5678899999999999999999 9999998
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 233 ~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~ 312 (471)
T cd07139 233 AVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPL 312 (471)
T ss_pred HHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCC
Confidence 876 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++++||++++.+.+++.+++++++++|++++ ++.. ..|+|+.|||+.++++++++++||+||||++|++|+|+
T Consensus 313 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 392 (471)
T cd07139 313 DPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDE 392 (471)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCH
Confidence 789999999999999999999999999999995 4432 24899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+ . ...+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 393 ~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~-~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 393 DDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-L-DFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-C-CCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999999875 3 345899999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-93 Score=750.95 Aligned_cols=465 Identities=27% Similarity=0.473 Sum_probs=429.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||+|+|+.+ +..++++||+ ||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++
T Consensus 17 ~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (500)
T cd07083 17 RAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRR 94 (500)
T ss_pred ccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 35778999999874 4679999998 69999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.+++++..+.++.+..... +. ..+...++.++|+|||++|+|||||+
T Consensus 95 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~P~GVv~~I~P~N~P~ 168 (500)
T cd07083 95 RELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEV-----VP-YPGEDNESFYVGLGAGVVISPWNFPV 168 (500)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-----CC-CCCceEEEEEeccceEEEEcCCccHH
Confidence 9999999999999999999999999999999999888776543211 11 12345678899999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+|+.
T Consensus 169 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 248 (500)
T cd07083 169 AIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKK 248 (500)
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977889999999999999999999 99999
Q ss_pred HHHHcC--C------CceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKAG--M------IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a~--~------~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
+.+.+. . +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 249 v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 328 (500)
T cd07083 249 IYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAE 328 (500)
T ss_pred HHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHH
Confidence 988763 3 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc--CCCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
++++||| ++++++||++++.+.+++++++++++++| ++ +++.. ..|+|+.|||+.++++++++++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 407 (500)
T cd07083 329 RLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSV 407 (500)
T ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999 78899999999999999999999999988 66 44432 25899999999999999999999999999999
Q ss_pred EecC--CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCC-CcchHHHH
Q 011080 398 IRIN--SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIG-SQGITNSI 473 (494)
Q Consensus 398 ~~~~--~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g-~~~g~~~l 473 (494)
++|+ |+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.+.... ..+||||+|.||+| +++|.+++
T Consensus 408 ~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l 487 (500)
T cd07083 408 IRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYL 487 (500)
T ss_pred EEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHH
Confidence 9999 99999999999999999999999999999999999999999999876443 34899999999999 68999999
Q ss_pred HHhhceeEEEEe
Q 011080 474 NMMTKIKSTVIN 485 (494)
Q Consensus 474 ~~~~~~k~i~~~ 485 (494)
++|++.|+++..
T Consensus 488 ~~~~~~k~~~~~ 499 (500)
T cd07083 488 RRFLEMKAVAER 499 (500)
T ss_pred HHhhheeEEEEc
Confidence 999999998754
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-94 Score=746.54 Aligned_cols=451 Identities=35% Similarity=0.585 Sum_probs=422.8
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++..+.++.+...+. . .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~K 157 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPL--D-ATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLK 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc--c-ccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999998887776543221 1 01111245667889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceE
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDAC 269 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~ 269 (494)
||+.+|+++..++++|.++|+|+|++++++|++.++++.|..||+++.|+|||| .+|+.+.+.++.+|+++|+|||||+
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~lelGGk~~~ 237 (453)
T cd07094 158 PASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGKRIALELGGNAPV 237 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHcCCCceEEecCCCCce
Confidence 999999999999999999999999999999987788999999999999999999 9999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.+
T Consensus 238 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 317 (453)
T cd07094 238 IVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVER 317 (453)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 78999999999999999999
Q ss_pred HHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHH
Q 011080 349 LVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~ 428 (494)
++++|+++|++++.++...|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 318 ~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~ 397 (453)
T cd07094 318 WVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNV 397 (453)
T ss_pred HHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHH
Confidence 99999999999976555578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 429 ~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+.++++++++|+|+||++.....+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 398 a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 398 AFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred HHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 99999999999999999866544568999999999999999999999999999853
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-94 Score=745.02 Aligned_cols=449 Identities=29% Similarity=0.453 Sum_probs=415.8
Q ss_pred EeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHh-cCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSW-AKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 32 ~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w-~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
+++||+||+++++++.++.+++++++++|++||+.| +.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 578999999999999999999999999999999985 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+.+.++.+++++..+.++.+..... . ......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPM--G-LTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc--c-cccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 99999999999998887765542211 0 00011234568899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc-CCCceEEecCCcce
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA-GMIPLQMELGGKDA 268 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a-~~~~~~le~gG~~~ 268 (494)
||+.+|+++.+++++|.++|+|+|++|+++++ .+.+..|+.||+++.|+|||| .+|+.+.+.+ ..+|+++|+|||||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~~~~~~lElGG~~p 237 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGTRCALEHGGAAP 237 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhcCCcEEEecCCCCc
Confidence 99999999999999999999999999999985 467899999999999999999 9999998876 46899999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.+.++++
T Consensus 238 ~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 317 (455)
T cd07148 238 VIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVE 317 (455)
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred HHHHHHHHcCCEEe-ecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCH
Q 011080 348 GLVMDAKQKAATFC-QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~-~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~ 426 (494)
+++++++++|++++ ++....++|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 318 ~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~ 397 (455)
T cd07148 318 EWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397 (455)
T ss_pred HHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 99999999999996 44344689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 427 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+.+.++++++++|+|+||+++...+..+||||+|.||+|+++|.+|+++|++.|+|+|
T Consensus 398 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 398 DVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 9999999999999999998765554568999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-94 Score=747.22 Aligned_cols=462 Identities=24% Similarity=0.312 Sum_probs=411.9
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHH-hHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|..+|.++|+++++.|++++++
T Consensus 1 ~~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 1 LQSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred CceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999876 35789999999999999999876 8999999999998 79999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccc-cCCCCCCCCC-ceEEEEeee-ceeEEeeCCCCch
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLV-SDSFPGNERT-KYCLTSKIP-LGVVLAIPPFNYP 169 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P 169 (494)
|+++ +.|+|||+.+++.|+..+++.+++++..++++.+...... .+..+..... ...++.++| +|||++|+|||||
T Consensus 79 la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 79 LYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred HHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccH
Confidence 9996 9999999999999999999999999998877654221111 0111111111 134677999 5999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcC-CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aG-lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
+.+.++++++||++||+||+|||+.+|+++.+|+++|.++| +|+|++|+++|++.+++..| +.++.|.|||| .+|
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G 234 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATA 234 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 99999999998654444433 57899999999 999
Q ss_pred HHHHHHc----CCCceEEecCCcceEEEeCCCC-----HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHH
Q 011080 248 ISISKKA----GMIPLQMELGGKDACIILEDAD-----LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318 (494)
Q Consensus 248 ~~v~~~a----~~~~~~le~gG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 318 (494)
+.+++.+ .++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++|++|+++|++
T Consensus 235 ~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~ 314 (513)
T cd07128 235 AKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKA 314 (513)
T ss_pred HHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHH
Confidence 9999873 4799999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc---------CCCceeecEEEeeCCCC--CCC
Q 011080 319 KVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK---------REGNLIWPLLLDNVRPD--MRI 385 (494)
Q Consensus 319 ~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~---------~~g~~~~Ptvl~~~~~~--~~~ 385 (494)
+++++++||| ++++++||++++.+++++.++|++|+++ ++++ +|.. ..|+|++|||+.+++++ +.+
T Consensus 315 ~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i 393 (513)
T cd07128 315 RLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAV 393 (513)
T ss_pred HHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchH
Confidence 9999999999 8899999999999999999999999988 8885 4422 24899999999988874 899
Q ss_pred cccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcc--cceEEECCCCCC--------CCCCCC
Q 011080 386 AWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAME--TGTVQINSAPSR--------GPDHFP 455 (494)
Q Consensus 386 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~--~g~v~iN~~~~~--------~~~~~p 455 (494)
++||+||||++|++|+|+||+|+++|+++|||++||||+|.+++++++++++ +|+|+||+.++. ....+|
T Consensus 394 ~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~p 473 (513)
T cd07128 394 HDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLV 473 (513)
T ss_pred HhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999997 999999987521 124589
Q ss_pred ccCccCCCCCCc-chHHHHHHhhceeEE
Q 011080 456 FQGLKDSGIGSQ-GITNSINMMTKIKST 482 (494)
Q Consensus 456 fgG~~~SG~g~~-~g~~~l~~~~~~k~i 482 (494)
|||+|.||+|++ +|.+|+++|++.|+|
T Consensus 474 fGG~k~SG~G~~~gg~~~l~~~~~~k~v 501 (513)
T cd07128 474 HGGPGRAGGGEELGGLRGVKHYMQRTAV 501 (513)
T ss_pred CCCcccCCCCcccccHHHHHHhheeeee
Confidence 999999999999 579999999999987
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-93 Score=745.20 Aligned_cols=468 Identities=52% Similarity=0.823 Sum_probs=435.0
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCC-CHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKT-PLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||||+|+.+. +..++++||+||+++++++.++.+++++++++|++|++.|+.+ +.++|.++|+++++.|.+++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999998764 6789999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||..+++.|+.++++.++++++...++.+.... ...... ..+...+..++|+|||++|+|||||+.+
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLP--GDWFPG-TKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--cccccc-CCCceeEEEEecceEEEEECCcCcHHHH
Confidence 9999999999999999999999999999999887776544211 110000 1234567899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|+++++++++.+++..|..|++++.|+|||| .+++.+.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987778999999999999999999 9999999
Q ss_pred HHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CC
Q 011080 252 KKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-ED 330 (494)
Q Consensus 252 ~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~ 330 (494)
+.+..+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+| ++
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~ 317 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDN 317 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 98778999999999999999999999999999999999999999999999999999999999999999999999999 77
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHH 409 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 409 (494)
++++||++++.+.+++++++++++++|++++.|+ ...|+|+.|||+.+++++++++++|+||||++|++|+|+||||++
T Consensus 318 ~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~ 397 (473)
T cd07082 318 GVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIEL 397 (473)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHH
Confidence 8999999999999999999999999999996443 334899999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 410 CNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 410 ~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
+|+++|||+++|||+|.+.+.++++++++|+|+||+++......+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 398 ANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 9999999999999999999999999999999999998765555689999999999999999999999999999764
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-93 Score=743.82 Aligned_cols=450 Identities=38% Similarity=0.589 Sum_probs=419.1
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..++..+++++..+.++.++.... . .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPL--D-ISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccc--c-cccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999988877664432111 0 00001234567889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceE
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDAC 269 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~ 269 (494)
||+.+|.++.+|+++|.++|+|+|++|+++++ .+.+..|+.||+++.|+|||| .+|+.+.+.++.+|+++|+|||||+
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~~~v~lelgG~~p~ 236 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKKKVVLELGGNAAV 236 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCcCceEeecCCCCcE
Confidence 99999999999999999999999999999995 467889999999999999999 9999999988888999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++||| ++++++||++++.+.+++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 316 (452)
T cd07147 237 IVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEG 316 (452)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 77899999999999999999
Q ss_pred HHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHH
Q 011080 349 LVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~ 428 (494)
++++++++|++++.|+...|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 317 ~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~ 396 (452)
T cd07147 317 WVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEK 396 (452)
T ss_pred HHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 99999999999976555679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 429 ~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
++++++++++|+|+||+.+.....++||||+|+||+|+++|.+|+++|++.|+|+|
T Consensus 397 a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 397 ALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999999776544568999999999999999999999999999865
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-93 Score=743.76 Aligned_cols=451 Identities=38% Similarity=0.614 Sum_probs=417.7
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.++++++....+.+..... +. .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPV--DA-YEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccC--cc-ccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999988766443332110 00 0001234567889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcc
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKD 267 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~ 267 (494)
||+.+|.++..++++|.++|+|+|++++++|++.++++.|+.||+++.|.|||| .+|+.+.+.+. ++|+++|+||||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n 237 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSD 237 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCC
Confidence 999999999999999999999999999999977888999999999999999999 99999998874 899999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 268 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 238 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 317 (456)
T cd07145 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERM 317 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHHcCCEEeecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC
Q 011080 347 EGLVMDAKQKAATFCQEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d 425 (494)
++++++++++|++++.++ ...|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 318 ~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 397 (456)
T cd07145 318 ENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTND 397 (456)
T ss_pred HHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence 999999999999995443 3348999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 426 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
.+.+.++++++++|+|+||+.+......+||||+|+||+|+++|++|+++|++.|+|+|
T Consensus 398 ~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 398 INRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 99999999999999999998775444568999999999999999999999999999864
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-93 Score=743.92 Aligned_cols=447 Identities=35% Similarity=0.550 Sum_probs=419.5
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++...++..+... +....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilK 153 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETL-------PSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLK 153 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccc-------cCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEE
Confidence 999999999999888776544321 1111244567899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcc
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKD 267 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~ 267 (494)
||+.+|.++..|+++|.++|+|+|++|++++++.+.+..|+.||+++.|+|||| .+|+.+.+.+ ..+|+++|+||||
T Consensus 154 ps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~ 233 (451)
T cd07150 154 PSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKN 233 (451)
T ss_pred CCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCC
Confidence 999999999999999999999999999999977788999999999999999999 9999998876 4789999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 268 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 234 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 313 (451)
T cd07150 234 PLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERI 313 (451)
T ss_pred eeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 778999999999999999
Q ss_pred HHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCH
Q 011080 347 EGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~ 426 (494)
.+++++++++|++++.++..+|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 314 ~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 314 KRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999655555689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 427 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+++.++++++++|+|+||+++......+||||+|+||+|+++|.+|+++||+.|+|++
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 9999999999999999999877554558999999999999999999999999999863
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-93 Score=743.40 Aligned_cols=459 Identities=28% Similarity=0.417 Sum_probs=422.0
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAE 95 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 95 (494)
+||+|+|+.+ ++..++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5899999865 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHh
Q 011080 96 CLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVS 175 (494)
Q Consensus 96 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 175 (494)
++++|+|||..+++.|+..+++.+++++.......+.... + ..+...++.++|+|||++|+|||||+.+.++
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~------~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 151 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESEN------P--MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNG 151 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc------C--CCCceeEEEEecccEEEEECCCchHHHHHHH
Confidence 9999999999999999999999999887766555433210 1 1123467889999999999999999999999
Q ss_pred hHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc
Q 011080 176 KIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA 254 (494)
Q Consensus 176 ~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a 254 (494)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.||++|.|+|||| .+|+.+.+.+
T Consensus 152 ~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~a 230 (484)
T TIGR03240 152 HIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQF 230 (484)
T ss_pred HHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998 5678999999999999999999 9999999875
Q ss_pred C---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchH-HHHHHHHHHHHhccccCCC--
Q 011080 255 G---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA-DTLVEKVKAKVAKLTVGAP-- 328 (494)
Q Consensus 255 ~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~p-- 328 (494)
. .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|++.++++++|+|
T Consensus 231 a~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 231 AGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred hhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCc
Confidence 2 577999999999999999999999999999999999999999999999999985 9999999999999999997
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-ecc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
++.+++||++++.+.+++.+++++++++|++++ ++. +..++|++|||+ ++++++.++++|+||||++|++|+|+||
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~e 389 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDE 389 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHH
Confidence 457899999999999999999999999999884 332 235789999999 6899999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||+........+||||+|.||+|+++|.++++ |++.|+++++
T Consensus 390 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~ 468 (484)
T TIGR03240 390 AIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLE 468 (484)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEe
Confidence 999999999999999999999999999999999999999877655556899999999999999977766 9999999999
Q ss_pred c
Q 011080 486 L 486 (494)
Q Consensus 486 ~ 486 (494)
+
T Consensus 469 ~ 469 (484)
T TIGR03240 469 A 469 (484)
T ss_pred c
Confidence 5
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-93 Score=739.13 Aligned_cols=442 Identities=29% Similarity=0.416 Sum_probs=413.5
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH--hcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++||+||+++++++.++.+|+++|++.|++||+. |+. +..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++..+.+..+.... . ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~-------~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlK 151 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIE-------P-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVK 151 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccc-------c-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeE
Confidence 9999999999999887765543211 0 1134568899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHH-cCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCc
Q 011080 191 PPTQGAVAALHMVHCFHL-AGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGK 266 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~-aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~ 266 (494)
||+.+|.++..++++|.+ +|+|+|++|++++++.+++..|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+|||
T Consensus 152 ps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~ 231 (455)
T cd07120 152 PAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGK 231 (455)
T ss_pred CCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence 999999999999999999 799999999999977788999999999999999999 9999998876 479999999999
Q ss_pred ceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHH
Q 011080 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANF 345 (494)
Q Consensus 267 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~ 345 (494)
||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.++
T Consensus 232 ~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~ 311 (455)
T cd07120 232 TPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDR 311 (455)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88999999999999999
Q ss_pred HHHHHHHHHHcCCEEe-eccc-C----CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceE
Q 011080 346 IEGLVMDAKQKAATFC-QEYK-R----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419 (494)
Q Consensus 346 ~~~~i~~a~~~Ga~v~-~~~~-~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 419 (494)
+++++++++++|++++ +|.. . +|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++
T Consensus 312 ~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~ 391 (455)
T cd07120 312 VDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAA 391 (455)
T ss_pred HHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceE
Confidence 9999999999999985 3422 2 58999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 420 ~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+|||+|.+.++++++++++|+|+||++.... ...||||+|+||+|+++|++++++||+.|+|++
T Consensus 392 ~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 392 SVWTRDLARAMRVARAIRAGTVWINDWNKLF-AEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred EEEcCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999987644 448999999999999999999999999999864
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-93 Score=740.67 Aligned_cols=443 Identities=32% Similarity=0.503 Sum_probs=413.8
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++.....+.+... +.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~-------~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps 152 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETI-------PVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPP 152 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccc-------cCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCC
Confidence 9999999999876655443321 111 13456789999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..+++++.++ +|+|++|+++|++.+.+..|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||+
T Consensus 153 ~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~ 231 (456)
T cd07107 153 EQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNAL 231 (456)
T ss_pred CCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeE
Confidence 99999999999999985 9999999999977778999999999999999999 9999999987 479999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHH-hhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGG-FSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~-~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
||++|||++.|++.+++++ |.++||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.++++++
T Consensus 232 iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~ 311 (456)
T cd07107 232 IVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVM 311 (456)
T ss_pred EECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHH
Confidence 9999999999999999995 8999999999999999999999999999999999999999 7899999999999999999
Q ss_pred HHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 011080 348 GLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 420 (494)
++|++|+++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~ 391 (456)
T cd07107 312 HYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAA 391 (456)
T ss_pred HHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEE
Confidence 99999999999995 4422 2489999999999999999999999999999999999999999999999999999
Q ss_pred EeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 421 v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 392 vft~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 392 IWTNDISQAHRTARRVEAGYVWINGSSRHF-LGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred EECCCHHHHHHHHHhcCcCEEEECCCCCCC-CCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999887654 4589999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-92 Score=746.34 Aligned_cols=465 Identities=32% Similarity=0.488 Sum_probs=429.2
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..+++|.+.|-. ++..++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++
T Consensus 18 ~~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~e 95 (524)
T PRK09407 18 RLRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREE 95 (524)
T ss_pred HHHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 456788888744 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||..++..|+..++..+++++..+.++++..... ...+ .....+..++|+|||++|+|||||+.+
T Consensus 96 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~---~~~~~~~~~~P~GVV~~I~P~N~Pl~~ 170 (524)
T PRK09407 96 LLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRA--GALP---VLTKTTELRQPKGVVGVISPWNYPLTL 170 (524)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc--ccCC---CCceEEEEEecceEEEEEeCCCChHHH
Confidence 99999999999999999999999999999998887776543211 0011 124567889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.| ++.|+|||| .+|+.++
T Consensus 171 ~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~ 248 (524)
T PRK09407 171 AVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLA 248 (524)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877889999986 689999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 328 (524)
T PRK09407 249 EQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGY 328 (524)
T ss_pred HHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 877 37999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 404 (494)
++++++||++++.+.+++++++++++++|++++.|+. ..|+|++|||+.++++++.+++||+||||++|++|+|+|
T Consensus 329 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~d 408 (524)
T PRK09407 329 DYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVD 408 (524)
T ss_pred CcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHH
Confidence 8899999999999999999999999999999964332 247999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCC--CCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 405 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR--GPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 405 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~--~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
|||+++|+++|||+++|||+|.+++.++++++++|.|+||+.... ....+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 409 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v 488 (524)
T PRK09407 409 EAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTI 488 (524)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEE
Confidence 999999999999999999999999999999999999999987652 233479999999999999999999999999999
Q ss_pred EEec
Q 011080 483 VINL 486 (494)
Q Consensus 483 ~~~~ 486 (494)
+++.
T Consensus 489 ~~~~ 492 (524)
T PRK09407 489 ATQR 492 (524)
T ss_pred EEcc
Confidence 8874
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-93 Score=739.16 Aligned_cols=446 Identities=32% Similarity=0.493 Sum_probs=415.6
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++..++++.+... ...+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps 156 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAE----RAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPS 156 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCC----ccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECc
Confidence 9999999999988877643211 111111124567889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..++++|.++|+|+|++|+++|++.+.++.|+.||+++.|+|||| .+|+.+.+++ ..+|+++|+|||||+
T Consensus 157 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~ 236 (456)
T cd07110 157 ELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPI 236 (456)
T ss_pred ccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCee
Confidence 9999999999999999999999999999977778999999999999999999 9999999876 479999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|+|++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++||| ++++++||++++.+++++++
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 78999999999999999999
Q ss_pred HHHHHHHcCCEEeecc-c----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 011080 349 LVMDAKQKAATFCQEY-K----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~-~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s 423 (494)
++++++.+|++++.++ . ..|+|+.|||+.+++++|.++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999995433 2 3588999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|++|+++|++.|+|+
T Consensus 397 ~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 397 RDAERCDRVAEALEAGIVWINCSQPCF-PQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999876544 45899999999999999999999999999984
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-92 Score=738.07 Aligned_cols=443 Identities=31% Similarity=0.523 Sum_probs=414.7
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhc-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWA-KTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 111 (494)
++||+||+++++++.++.+|+++++++|++|++.|+ .+|.++|.++|+++++.|.+++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999977 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.+++++...+++.+... +. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~-------~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKp 152 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETI-------PL-GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKP 152 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-------cc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 99999999999887776654321 11 12346789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcce
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDA 268 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~ 268 (494)
|+.+|.++..|+++|.++|+|+|++|+++|++.+.++.|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||
T Consensus 153 s~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~ 232 (454)
T cd07109 153 AEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSP 232 (454)
T ss_pred CCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCc
Confidence 99999999999999999999999999999977788999999999999999999 9999999976 47999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~ 348 (494)
+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.+.+++||++++.+.+++.+
T Consensus 233 ~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~ 312 (454)
T cd07109 233 QIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEG 312 (454)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999955789999999999999999
Q ss_pred HHHHHHHcCCEEeeccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEe
Q 011080 349 LVMDAKQKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 422 (494)
++++++++|++++.++. ..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 313 ~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~ 392 (454)
T cd07109 313 FVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVW 392 (454)
T ss_pred HHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEE
Confidence 99999999999964432 258999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 423 s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
|+|.+.+.++++++++|+|+||+........+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 393 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 393 TRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred CCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999999987434456899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-94 Score=747.57 Aligned_cols=452 Identities=41% Similarity=0.667 Sum_probs=422.7
Q ss_pred eeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHh
Q 011080 22 WRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEI 101 (494)
Q Consensus 22 ~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 101 (494)
|+.+.+ .+++++||.||+++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 777655 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHh
Q 011080 102 AKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 181 (494)
Q Consensus 102 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL 181 (494)
|||+.+++.|+..+++.++++++.++++.++..+ . ..+...++.++|+|||++|+|||||+.++++++++||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL 151 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLP-------S-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPAL 151 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEE-------E-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhcc-------c-ccccccccccccccceeecccccccccccccchhhhh
Confidence 9999999999999999999999988885553211 1 1367889999999999999999999999999999999
Q ss_pred hcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCc
Q 011080 182 IAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIP 258 (494)
Q Consensus 182 ~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~ 258 (494)
++||+||+|||+.+|.++.+++++|.++|+|+|++|+++|++.+++..|+.||+++.|.|||| .+++.+.+.++ ++|
T Consensus 152 aaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~ 231 (462)
T PF00171_consen 152 AAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKP 231 (462)
T ss_dssp HTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSE
T ss_pred cccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccc
Confidence 999999999999999999999999999999999999999988999999999999999999999 99999998873 799
Q ss_pred eEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCcc
Q 011080 259 LQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPV 337 (494)
Q Consensus 259 ~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl 337 (494)
+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||+
T Consensus 232 v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 311 (462)
T PF00171_consen 232 VVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPL 311 (462)
T ss_dssp EEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHC
T ss_pred ccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 789999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEeecc------cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHh
Q 011080 338 VTESSANFIEGLVMDAKQKAATFCQEY------KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411 (494)
Q Consensus 338 ~~~~~~~~~~~~i~~a~~~Ga~v~~~~------~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 411 (494)
++..+.+++.+++++++.+|+++..|+ ...|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|
T Consensus 312 ~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 391 (462)
T PF00171_consen 312 ISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALAN 391 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHH
T ss_pred ccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhccc
Confidence 999999999999999999999995433 46789999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 412 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 412 ~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+++|||+++|||+|.+.++++++++++|+|+||+++......+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 392 ~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 392 DSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 99999999999999999999999999999999999876655479999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-92 Score=736.48 Aligned_cols=444 Identities=32% Similarity=0.533 Sum_probs=415.5
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.++++.+++.|++|++.|+.+|..+|.++|+++++.|.+++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++...+...+... +. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 152 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHV-------PL-PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPS 152 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeee-------cc-CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCC
Confidence 9999999999887766443321 11 114566889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..+.++|.++|+|+|++|++++++ +++..|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||+
T Consensus 153 ~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~ 231 (457)
T cd07090 153 PFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPL 231 (457)
T ss_pred CcCcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCce
Confidence 9999999999999999999999999999854 68899999999999999999 9999999887 479999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++||| ++++++||++++.+++++.+
T Consensus 232 iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 311 (457)
T cd07090 232 IIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLG 311 (457)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 88999999999999999999
Q ss_pred HHHHHHHcCCEEeeccc--------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 011080 349 LVMDAKQKAATFCQEYK--------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 420 (494)
+|++++++|++++.++. .+|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||+++
T Consensus 312 ~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~ 391 (457)
T cd07090 312 YIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAG 391 (457)
T ss_pred HHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEE
Confidence 99999999999954332 2489999999999999999999999999999999999999999999999999999
Q ss_pred EeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 421 v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
|||+|.+.++++++++++|+|+||+..... ...||||+|.||+|+++|.+++++||+.|+|++++
T Consensus 392 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~~ 456 (457)
T cd07090 392 VFTRDLQRAHRVIAQLQAGTCWINTYNISP-VEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVEM 456 (457)
T ss_pred EEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCcCCCccCcCCccchHHHHHHHhCeEEEEEeC
Confidence 999999999999999999999999876544 44899999999999999999999999999998765
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-92 Score=742.16 Aligned_cols=463 Identities=28% Similarity=0.460 Sum_probs=427.6
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.-.||+|+|.. ++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++
T Consensus 33 ~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 110 (518)
T cd07125 33 AIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGE 110 (518)
T ss_pred cCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 34699999973 567899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++..+.++++.. . .+.. .+...+..++|+|||++|+|||||+.+
T Consensus 111 la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~-~-----~~~~-~g~~~~~~~~P~GVV~~I~p~N~P~~~ 183 (518)
T cd07125 111 LIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDP-E-----LPGP-TGELNGLELHGRGVFVCISPWNFPLAI 183 (518)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c-----ccCC-CCceeEEEEecccEEEEECCcchHHHH
Confidence 99999999999999999999999999999998888766543 1 1111 134567889999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|++++++.+.+..|..|++++.|+|||| .+++.+.
T Consensus 184 ~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 263 (518)
T cd07125 184 FTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLIN 263 (518)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977678999999999999999999 9999998
Q ss_pred HHcC-----CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 252 KKAG-----MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 252 ~~a~-----~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
+.+. .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 264 ~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 343 (518)
T cd07125 264 RALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVG 343 (518)
T ss_pred HHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCcc
Confidence 8764 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-ecccC--CCceeecEEEeeCCCCCCCcccccccceeeeEecC-
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN- 401 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~- 401 (494)
|| ++++++||++++.+.+++.+++++++.. ++++ ++... .|+|+.|||+.++ +|++++||+||||++|++|+
T Consensus 344 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~ 420 (518)
T cd07125 344 DPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKA 420 (518)
T ss_pred CCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCC
Confidence 99 7899999999999999999999999875 5664 44322 5899999999887 89999999999999999999
Q ss_pred -CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCCC-cchHHHHHHhhc
Q 011080 402 -SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIGS-QGITNSINMMTK 478 (494)
Q Consensus 402 -~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~-~~g~~~l~~~~~ 478 (494)
|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.++.. ...+||||+|.||+|+ ++|.+++++|++
T Consensus 421 ~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~ 500 (518)
T cd07125 421 EDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGN 500 (518)
T ss_pred CCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999987643 3458999999999995 788999999999
Q ss_pred eeEEEEecCC
Q 011080 479 IKSTVINLPT 488 (494)
Q Consensus 479 ~k~i~~~~~~ 488 (494)
.|+|++++..
T Consensus 501 ~k~i~~~~~~ 510 (518)
T cd07125 501 EKTVSLNTTA 510 (518)
T ss_pred eEEEEEEccc
Confidence 9999988654
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-92 Score=734.28 Aligned_cols=442 Identities=31% Similarity=0.492 Sum_probs=413.1
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHH--hcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 111 (494)
+||+||+++++++.++.+|++++++.|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 599999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.+++++...++..+... +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kp 154 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSY-------NNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKP 154 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99999999999887665543221 11112345678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcce
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDA 268 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~ 268 (494)
|+.+|.++..++++|.++|+|+|+++++++++.+++..|..||+++.|.|||| .+|+.+.+.+ ..+|+++|+|||||
T Consensus 155 s~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~ 234 (454)
T cd07118 155 SEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234 (454)
T ss_pred CCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCc
Confidence 99999999999999999999999999999977778999999999999999999 9999999876 47899999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.
T Consensus 235 ~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~ 314 (454)
T cd07118 235 QIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKIT 314 (454)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred HHHHHHHHcCCEEee-ccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 011080 348 GLVMDAKQKAATFCQ-EYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~-~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s 423 (494)
++|++++++|++++. |.. ..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 315 ~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft 394 (454)
T cd07118 315 DYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWS 394 (454)
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEEC
Confidence 999999999999954 432 2589999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+|.+.++++++++++|.|+||+..... ...||||+|.||+|+++|++++++||+.|+++
T Consensus 395 ~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 395 KDIDTALTVARRIRAGTVWVNTFLDGS-PELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred CCHHHHHHHHHhcCcCEEEECCCCCCC-CCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999999987644 45899999999999999999999999999985
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=733.33 Aligned_cols=444 Identities=32% Similarity=0.502 Sum_probs=412.4
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVV 113 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 113 (494)
.||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCC
Q 011080 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193 (494)
Q Consensus 114 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~ 193 (494)
.+++.+++++..+.++++..... ...+ .....+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~ 155 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRR--GAIP---VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDS 155 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCcccc--ccCC---CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 99999999998887776543211 0111 123568899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEE
Q 011080 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACI 270 (494)
Q Consensus 194 ~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~i 270 (494)
.+|.++..+.++|.++|+|+|++|+++|++.+.+..|.+| ++.|.|||| .+|+.|++.+ ..+|+++|+|||||+|
T Consensus 156 ~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~i 233 (454)
T cd07101 156 QTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMI 233 (454)
T ss_pred cchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEE
Confidence 9999999999999999999999999999888889999987 478999999 9999999977 4799999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHH
Q 011080 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGL 349 (494)
Q Consensus 271 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~ 349 (494)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.++++++++
T Consensus 234 V~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~ 313 (454)
T cd07101 234 VLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAH 313 (454)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHcCCEEeeccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC
Q 011080 350 VMDAKQKAATFCQEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425 (494)
Q Consensus 350 i~~a~~~Ga~v~~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d 425 (494)
+++++++|++++.++. ..|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 314 v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d 393 (454)
T cd07101 314 VDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRD 393 (454)
T ss_pred HHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999954332 247899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEECCCCCC--CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 426 INKAILISDAMETGTVQINSAPSR--GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 426 ~~~~~~~~~~~~~g~v~iN~~~~~--~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
.+++.++++++++|+|+||++... ....+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 394 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 394 GARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 999999999999999999987652 33458999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=733.17 Aligned_cols=447 Identities=31% Similarity=0.469 Sum_probs=414.9
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhc-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-H
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWA-KTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-T 110 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ 110 (494)
++||+||+++++++.++.+|+++++++|++|++.|+ .+|..+|.++|+++++.|++++++|++++++|+|||..+++ .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.++++++.+.++.+.... ...... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlK 157 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDL-PVPALR--GGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLK 157 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceec-Cccccc--CCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999999888776544311 110000 1235568999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcc
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKD 267 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~ 267 (494)
||+.+|.++..++++|.++|+|+|++++++|++.+++..|..||+++.|.|||| .+|+.+.+.+ .++|+++|+||||
T Consensus 158 ps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n 237 (459)
T cd07089 158 PAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKS 237 (459)
T ss_pred CCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence 999999999999999999999999999999977778999999999999999999 9999999877 4799999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 268 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 788999999999999999
Q ss_pred HHHHHHHHHcCCEEeeccc-----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEE
Q 011080 347 EGLVMDAKQKAATFCQEYK-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 421 (494)
++++++++++|++++.|+. .+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v 397 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGV 397 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEE
Confidence 9999999999999964332 25899999999999999999999999999999999999999999999999999999
Q ss_pred eccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 422 ~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||+|.+.+.++++++++|+|+||+..... ...||||+|+||+|+++|++|+++||+.|+|+
T Consensus 398 ~t~d~~~~~~~~~~~~~G~v~iN~~~~~~-~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 398 WSADVDRAYRVARRIRTGSVGINGGGGYG-PDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred EcCCHHHHHHHHHhcCcCeEEECCCCCCC-CCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 99999999999999999999999877544 44899999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=736.47 Aligned_cols=445 Identities=27% Similarity=0.441 Sum_probs=415.0
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCC-CceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTR-KPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg-~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.+++||||+|+. ++.+++++||+|+ +++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 114 (500)
T TIGR01238 37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMP 114 (500)
T ss_pred ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHH
Confidence 468999999986 4678999999995 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||..+++.|+..+++.+++++...+..++. ..++|+|||++|+|||||+.
T Consensus 115 ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~-------------------~~~~P~GVV~~I~pwN~P~~ 175 (500)
T TIGR01238 115 ELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE-------------------FSVESRGVFVCISPWNFPLA 175 (500)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------------------eeccCcceEEEECCCchHHH
Confidence 99999999999999999999999999999998876543211 35789999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|+.||+++.|+|||| .+|+.+
T Consensus 176 ~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v 255 (500)
T TIGR01238 176 IFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLI 255 (500)
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877788999999999999999999 999999
Q ss_pred HHHcC--C---CceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 251 SKKAG--M---IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 251 ~~~a~--~---~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.++ . +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 256 ~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~v 335 (500)
T TIGR01238 256 NQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKV 335 (500)
T ss_pred HHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCC
Confidence 98763 2 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeec---c---cCCCceeecEEEeeCCCCCCCcccccccceeeeE
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQE---Y---KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 398 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~---~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 398 (494)
|+| ++++++||++++.+.++++++++++++.|+++..+ . ..+|+|++|||+.. +++.++++|+||||++|+
T Consensus 336 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~ 413 (500)
T TIGR01238 336 GVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVV 413 (500)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEE
Confidence 999 88999999999999999999999999999998532 1 13589999999973 688899999999999999
Q ss_pred ecC--CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCC-CcchHHHHH
Q 011080 399 RIN--SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIG-SQGITNSIN 474 (494)
Q Consensus 399 ~~~--~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g-~~~g~~~l~ 474 (494)
+|+ ++||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+...... ..+||||+|+||+| +++|.++++
T Consensus 414 ~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~ 493 (500)
T TIGR01238 414 RYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLY 493 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHH
Confidence 998 79999999999999999999999999999999999999999998765432 34799999999999 899999999
Q ss_pred Hhhcee
Q 011080 475 MMTKIK 480 (494)
Q Consensus 475 ~~~~~k 480 (494)
+|++.|
T Consensus 494 ~~~~~k 499 (500)
T TIGR01238 494 RLTQVQ 499 (500)
T ss_pred HHHhhc
Confidence 999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-92 Score=734.34 Aligned_cols=447 Identities=33% Similarity=0.523 Sum_probs=417.7
Q ss_pred CeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChH
Q 011080 29 KSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK 106 (494)
Q Consensus 29 ~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 106 (494)
..++++||+||+++++++.++.++++++++.|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 3588999999999999999999999999999999997 59999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCC
Q 011080 107 DAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185 (494)
Q Consensus 107 ~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN 185 (494)
+++. |+..+++.+++++..++++.+... +. ..+...++.++|+|||++|+|||||+.+.++++++||++||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN 153 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVA-------PT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGN 153 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcee-------cC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCC
Confidence 9974 999999999999988877665421 11 12345678999999999999999999999999999999999
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc---CCCceEE
Q 011080 186 SIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA---GMIPLQM 261 (494)
Q Consensus 186 ~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a---~~~~~~l 261 (494)
+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+++..|..|++++.|+|||| .+|+.+.+.+ .++|+++
T Consensus 154 ~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l 233 (462)
T cd07112 154 SVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233 (462)
T ss_pred eeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEe
Confidence 99999999999999999999999999999999999987789999999999999999999 9999998865 3699999
Q ss_pred ecCCcceEEEeCCC-CHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCC
Q 011080 262 ELGGKDACIILEDA-DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVT 339 (494)
Q Consensus 262 e~gG~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~ 339 (494)
|+||+||+||++|+ |++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+| ++++++||+++
T Consensus 234 elgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 313 (462)
T cd07112 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVS 313 (462)
T ss_pred cCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcC
Confidence 99999999999999 99999999999999999999999999999999999999999999999999999 78999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEe-ecccC----CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC
Q 011080 340 ESSANFIEGLVMDAKQKAATFC-QEYKR----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN 414 (494)
Q Consensus 340 ~~~~~~~~~~i~~a~~~Ga~v~-~~~~~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 414 (494)
+.+.+++.++|++++++|++++ +|... .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++
T Consensus 314 ~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 393 (462)
T cd07112 314 EAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSV 393 (462)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCC
Confidence 9999999999999999999995 44322 488999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 415 FGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 415 ~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
|||+++|||+|.+.+.++++++++|+|+||+.+... ..+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 394 ~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 462 (462)
T cd07112 394 YGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGD-ITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462 (462)
T ss_pred ccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence 999999999999999999999999999999876544 458999999999999999999999999999853
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-92 Score=754.70 Aligned_cols=464 Identities=23% Similarity=0.311 Sum_probs=412.8
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHH-hHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
.+||||+|+.+. +..++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|..+|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999998753 5679999999999999999999 6999999999996 999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccc-cCCCCCCCC-CceEEEEeeec-eeEEeeCCCCchH
Q 011080 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLV-SDSFPGNER-TKYCLTSKIPL-GVVLAIPPFNYPV 170 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P~ 170 (494)
++ +++|+|||+.+++.|+..+++.+++++..+++......+.. .+..+.... ....++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 59999999999999999999999999988776432211110 011111111 12467899998 9999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcC-CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aG-lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
.++++++++||++||+||+|||+.+|+++.+|+++|.++| +|+|++|+++|+. +..+..+++++.|+|||| .+|+
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999853 233333477899999999 9999
Q ss_pred HHHHHc----CCCceEEecCCcceEEEeCCCC-----HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHH
Q 011080 249 SISKKA----GMIPLQMELGGKDACIILEDAD-----LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAK 319 (494)
Q Consensus 249 ~v~~~a----~~~~~~le~gG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 319 (494)
.|++.+ .++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++
T Consensus 236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence 999852 4799999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc-CCCceeecEEEeeCCCCC-CCccccccccee
Q 011080 320 VAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-REGNLIWPLLLDNVRPDM-RIAWEEPFGPVL 395 (494)
Q Consensus 320 ~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-~~g~~~~Ptvl~~~~~~~-~~~~~E~fgPvl 395 (494)
++++++||| ++++++||++++.+.++++++|++|+++|++++ +|.. .+|+|++|||+.+++++| .+++||+||||+
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl 395 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVA 395 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeE
Confidence 999999999 789999999999999999999999999999995 4422 358999999999988876 799999999999
Q ss_pred eeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc--ccceEEE-CCCC-------CCCCCCCCccCccCCCCC
Q 011080 396 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM--ETGTVQI-NSAP-------SRGPDHFPFQGLKDSGIG 465 (494)
Q Consensus 396 ~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~--~~g~v~i-N~~~-------~~~~~~~pfgG~~~SG~g 465 (494)
+|++|+|.||||+++|+++|||++||||+|.+.+.++++++ ++|+|+| |... ......+||||+|+||+|
T Consensus 396 ~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G 475 (663)
T TIGR02278 396 TFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGG 475 (663)
T ss_pred EEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCC
Confidence 99999999999999999999999999999999999999999 8999999 6421 122245899999999999
Q ss_pred Cc-chHHHHHHhhceeEEEE
Q 011080 466 SQ-GITNSINMMTKIKSTVI 484 (494)
Q Consensus 466 ~~-~g~~~l~~~~~~k~i~~ 484 (494)
++ +|.+++++|++.|+|..
T Consensus 476 ~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 476 EELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CccchHHHHHHhceeEEEEc
Confidence 99 57899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-92 Score=729.35 Aligned_cols=446 Identities=38% Similarity=0.580 Sum_probs=414.1
Q ss_pred EeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH
Q 011080 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE 111 (494)
Q Consensus 32 ~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 111 (494)
+++||+||+++++++.++.+++++++++|+++ |+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999875 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.+++++.....+.++.... . ......+...+..++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSC--D-LTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccc--c-cccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 9999999999988776654432110 0 000012345678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEE
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACI 270 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~i 270 (494)
|+.+|+++..+.++|.++|+|+|++++++|++.+++..|+.||+++.|+|||| .+|+.+.+.++.+++++|+|||||+|
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~~~~~~lElGG~~p~i 235 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQLLELGGNDPLI 235 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhcCCceeeecCCCceEE
Confidence 99999999999999999999999999999977788999999999999999999 99999999888899999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHH
Q 011080 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGL 349 (494)
Q Consensus 271 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~ 349 (494)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.++++++
T Consensus 236 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~ 315 (451)
T cd07146 236 VMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENR 315 (451)
T ss_pred ECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 789999999999999999999
Q ss_pred HHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHH
Q 011080 350 VMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429 (494)
Q Consensus 350 i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~ 429 (494)
+++++++|+++..++...|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 316 v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 395 (451)
T cd07146 316 VEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTI 395 (451)
T ss_pred HHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999999655555689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEECCCCCCCCCCCCccCccCCCC-CCcchHHHHHHhhceeEEE
Q 011080 430 ILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGI-GSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 430 ~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~-g~~~g~~~l~~~~~~k~i~ 483 (494)
.++++++++|+|+||+.+......+||||+|+||+ |+++|++|+++||+.|+|+
T Consensus 396 ~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 396 KRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999997655445689999999995 8999999999999999885
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-92 Score=736.96 Aligned_cols=464 Identities=22% Similarity=0.306 Sum_probs=409.7
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHh-HHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQ-KSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||+|+|+.+ .+..++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|++++++|++++++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (521)
T PRK11903 5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDA 82 (521)
T ss_pred hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999865 346799999999999999996 8899999999999995 9999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCC-CCceEEEEeee-ceeEEeeCCCCchH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE-RTKYCLTSKIP-LGVVLAIPPFNYPV 170 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P-~GVv~~i~p~n~P~ 170 (494)
|++++++|+|||+.+++.|+.++++.+++++..+..+.+..........+... .....++.++| +|||++|+|||||+
T Consensus 83 la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 162 (521)
T PRK11903 83 YYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPA 162 (521)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHH
Confidence 99999999999999999999999999999998876654322111011111000 12234577889 69999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcC-CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aG-lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
.+.++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+++|++.+++..| ++++.|+|||| .+|+
T Consensus 163 ~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~ 239 (521)
T PRK11903 163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAA 239 (521)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999666655544 78999999999 9999
Q ss_pred HHHHHc----CCCceEEecCCcceEEEeCCCC-----HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHH
Q 011080 249 SISKKA----GMIPLQMELGGKDACIILEDAD-----LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAK 319 (494)
Q Consensus 249 ~v~~~a----~~~~~~le~gG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 319 (494)
.+++.+ .++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 240 ~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~ 319 (521)
T PRK11903 240 VLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAAR 319 (521)
T ss_pred HHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHH
Confidence 999853 3789999999999999999999 5999999999999999999999999999999999999999999
Q ss_pred HhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--------CCCceeecEEEeeCCC--CCCCcc
Q 011080 320 VAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--------REGNLIWPLLLDNVRP--DMRIAW 387 (494)
Q Consensus 320 ~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--------~~g~~~~Ptvl~~~~~--~~~~~~ 387 (494)
++++++||| ++++++||++++.+.+++.++|+.. .+|++++ +|.. .+|+|++|||+.++++ ++++++
T Consensus 320 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~ 398 (521)
T PRK11903 320 LAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHD 398 (521)
T ss_pred HHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHh
Confidence 999999999 7899999999999999999999964 5799995 4322 2489999999986654 468899
Q ss_pred cccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc--ccceEEECCCCC--------CCCCCCCcc
Q 011080 388 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM--ETGTVQINSAPS--------RGPDHFPFQ 457 (494)
Q Consensus 388 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~--~~g~v~iN~~~~--------~~~~~~pfg 457 (494)
||+||||++|++|+|.||||+++|+++|||++||||+|.+.+.++++++ ++|+|+||+.+. ...+.+|||
T Consensus 399 eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfG 478 (521)
T PRK11903 399 VEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHG 478 (521)
T ss_pred CcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 999999997542 122358999
Q ss_pred CccCCCCCCc-chHHHHHHhhceeEEE
Q 011080 458 GLKDSGIGSQ-GITNSINMMTKIKSTV 483 (494)
Q Consensus 458 G~~~SG~g~~-~g~~~l~~~~~~k~i~ 483 (494)
|+|.||+|++ +|.+++++||+.|+|.
T Consensus 479 G~k~SG~Gr~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 479 GPGRAGGGEELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCcCcCCcccccHHHHHHHhccceee
Confidence 9999999999 5589999999988764
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-92 Score=730.94 Aligned_cols=443 Identities=33% Similarity=0.515 Sum_probs=415.1
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEV 112 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev 112 (494)
+||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999997 599
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++.+.++..+... +. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~-------~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps 153 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVI-------PV-RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPA 153 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCcee-------cC-CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECC
Confidence 9999999999887766544321 11 123456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..+.++|.++|+|+|++++++|++.++++.|..||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||+
T Consensus 154 ~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~ 233 (453)
T cd07115 154 ELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN 233 (453)
T ss_pred CCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCce
Confidence 9999999999999999999999999999977788999999999999999999 9999999876 479999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.+
T Consensus 234 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 313 (453)
T cd07115 234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLD 313 (453)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 88999999999999999999
Q ss_pred HHHHHHHcCCEEe-ecccC--CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC
Q 011080 349 LVMDAKQKAATFC-QEYKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425 (494)
Q Consensus 349 ~i~~a~~~Ga~v~-~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d 425 (494)
++++++++|+++. ++... .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 314 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d 393 (453)
T cd07115 314 YVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRD 393 (453)
T ss_pred HHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCC
Confidence 9999999999995 44322 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 426 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
.+.++++++++++|+|+||+.+... ..+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 394 ~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 394 LGRAHRVAAALKAGTVWINTYNRFD-PGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHHHHHhcCccEEEECCCCCCC-CCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999866544 4589999999999999999999999999999875
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-91 Score=729.77 Aligned_cols=441 Identities=32% Similarity=0.494 Sum_probs=414.0
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVV 113 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 113 (494)
+||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCC
Q 011080 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193 (494)
Q Consensus 114 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~ 193 (494)
.+++.+++++..+.++++.... +. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 153 (452)
T cd07102 81 GMLERARYMISIAEEALADIRV------PE-KDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSP 153 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCccc------CC-CCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999887776554221 11 1244567899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEE
Q 011080 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACI 270 (494)
Q Consensus 194 ~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~i 270 (494)
.+|.++..|.++|.++|+|+|++|++++++ +.+..|+.||+++.|+|||| .+|+.+.+.+ ..+|+.+|+|||||+|
T Consensus 154 ~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~i 232 (452)
T cd07102 154 QTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAY 232 (452)
T ss_pred CCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceE
Confidence 999999999999999999999999999966 78999999999999999999 9999999876 3789999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHH
Q 011080 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGL 349 (494)
Q Consensus 271 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~ 349 (494)
|++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|+++++++++||| ++++++||++++.+.+++.++
T Consensus 233 V~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~ 312 (452)
T cd07102 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQ 312 (452)
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHcCCEEe-eccc-----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEec
Q 011080 350 VMDAKQKAATFC-QEYK-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423 (494)
Q Consensus 350 i~~a~~~Ga~v~-~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s 423 (494)
+++++.+|++++ ++.. ..|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 313 i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 392 (452)
T cd07102 313 IADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWT 392 (452)
T ss_pred HHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999995 4422 3589999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+|.+.+.++++++++|+|+||++.... ...||||+|+||+|+++|.+|+++||+.|+++
T Consensus 393 ~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 393 KDIARAEALGEQLETGTVFMNRCDYLD-PALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred CCHHHHHHHHHHcCcceEEECCCCCCC-CCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 999999999999999999999876544 44899999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-92 Score=724.35 Aligned_cols=430 Identities=22% Similarity=0.320 Sum_probs=394.0
Q ss_pred CCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHh
Q 011080 48 CTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEG 126 (494)
Q Consensus 48 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 126 (494)
....|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.++++++.+
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999975 9999999999999988
Q ss_pred HHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH
Q 011080 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206 (494)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l 206 (494)
+++.+....... +. ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++
T Consensus 87 ~~~~~~~~~~~~---~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~ 162 (484)
T PLN02174 87 KNWMAPEKAKTS---LT-TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL 162 (484)
T ss_pred HHHhcccccccc---cc-cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHH
Confidence 888764321110 11 11335678999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHH
Q 011080 207 HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAAN 283 (494)
Q Consensus 207 ~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~ 283 (494)
.+ ++|+|++|+++|. .+.+..|.. +++|.|+|||| .+|+.|++.+ +++|+++|+|||||+||++|||++.|++.
T Consensus 163 ~~-~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~ 239 (484)
T PLN02174 163 EQ-YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRR 239 (484)
T ss_pred HH-hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHH
Confidence 99 7999999999984 445667776 89999999999 9999999877 58999999999999999999999999999
Q ss_pred HHHHHh-hccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-
Q 011080 284 IVKGGF-SYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC- 361 (494)
Q Consensus 284 i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~- 361 (494)
+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+.+++||++++.+.+++.++|+++ .+|++++
T Consensus 240 i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 240 IIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 999999 6999999999999999999999999999999999999995588999999999999999999997 7788885
Q ss_pred eccc-CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccce
Q 011080 362 QEYK-REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGT 440 (494)
Q Consensus 362 ~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~ 440 (494)
+|.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.
T Consensus 319 GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~ 398 (484)
T PLN02174 319 GGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGG 398 (484)
T ss_pred CCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcce
Confidence 4422 358999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCC-CCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 441 VQINSAPSRG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 441 v~iN~~~~~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
|+||++.... ...+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 399 v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 399 IVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred EEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 9999986543 34589999999999999999999999999999876
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=727.33 Aligned_cols=438 Identities=34% Similarity=0.502 Sum_probs=408.3
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++.... .... . +. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~--~-----~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps 150 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEV--I-----ED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPS 150 (446)
T ss_pred HHHHHHHHHHHhhhh--cCcc--c-----cC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999998877542 1111 0 11 124456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..++++|.++ +|+|++++++| +.+++..|..|++++.|+|||| .+|+.+.+.+ .++|+++|+|||||+
T Consensus 151 ~~~p~~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~ 228 (446)
T cd07106 151 PFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAA 228 (446)
T ss_pred ccchHHHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCee
Confidence 99999999999999995 99999999998 4568899999999999999999 9999999876 478999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+++++.+
T Consensus 229 iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~ 308 (446)
T cd07106 229 IVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKE 308 (446)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 88999999999999999999
Q ss_pred HHHHHHHcCCEEeecc-c--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC
Q 011080 349 LVMDAKQKAATFCQEY-K--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d 425 (494)
+++++..+|+++..|+ . ..|+|+.|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 309 ~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d 388 (446)
T cd07106 309 LVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSD 388 (446)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999995433 2 258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 426 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
.+++.++++++++|+|+||+++... +.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 389 ~~~~~~~~~~~~~G~v~iN~~~~~~-~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 389 LERAEAVARRLEAGTVWINTHGALD-PDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHHHHHhCCccEEEECCCCCCC-CCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 9999999999999999999987544 55899999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-91 Score=727.75 Aligned_cols=450 Identities=38% Similarity=0.625 Sum_probs=419.5
Q ss_pred EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 31 VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 31 ~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++..+.++.++.... +..+. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPF--DASPG-GEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc--cccCC-CCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999888776655432111 11111 1133467889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceE
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDAC 269 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~ 269 (494)
||+.+|.++.+|.++|.++|+|+|++++++|++.+++..|..||+++.|+|||| .+++.+.+.++.+|+++|+|||||+
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~lelGGk~p~ 237 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLKKVTLELGSNAAV 237 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcCCCceeeecCCCceE
Confidence 999999999999999999999999999999977777999999999999999999 9999999998889999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.+
T Consensus 238 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 317 (453)
T cd07149 238 IVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEE 317 (453)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 78899999999999999999
Q ss_pred HHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHH
Q 011080 349 LVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~ 428 (494)
++++++.+|+++..++...|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 318 ~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~ 397 (453)
T cd07149 318 WVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQK 397 (453)
T ss_pred HHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 99999999999965555568999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 429 ~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+.++++++++|+|+||+.++.....+||||+|+||+|+++|.+|+++|++.|+|+
T Consensus 398 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 398 ALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 9999999999999999987654456899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-91 Score=721.67 Aligned_cols=437 Identities=33% Similarity=0.520 Sum_probs=407.6
Q ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Q 011080 39 RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL 118 (494)
Q Consensus 39 g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~ 118 (494)
|+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHH
Q 011080 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198 (494)
Q Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t 198 (494)
+++++.......+... +. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 l~~~~~~~~~~~~~~~-------~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 152 (443)
T cd07152 81 LHEAAGLPTQPQGEIL-------PS-APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVS 152 (443)
T ss_pred HHHHHHhHHHhCCccc-------cc-cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchh
Confidence 9999876554333211 11 124556789999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCC
Q 011080 199 A-LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILED 274 (494)
Q Consensus 199 ~-~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~d 274 (494)
+ ..+.++|.++|+|+|++|+++| +.+.+..|..||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|
T Consensus 153 ~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 231 (443)
T cd07152 153 GGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDD 231 (443)
T ss_pred HHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCC
Confidence 6 7899999999999999999998 5678899999999999999999 9999998876 47999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHH
Q 011080 275 ADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDA 353 (494)
Q Consensus 275 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a 353 (494)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||| ++++.+||++++.+.+++.++++++
T Consensus 232 Adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 311 (443)
T cd07152 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDS 311 (443)
T ss_pred CCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 7889999999999999999999999
Q ss_pred HHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHH
Q 011080 354 KQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433 (494)
Q Consensus 354 ~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~ 433 (494)
+++|++++.++...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++
T Consensus 312 ~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~ 391 (443)
T cd07152 312 VAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALA 391 (443)
T ss_pred HhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHH
Confidence 99999996554456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEECCCCCCCCCCCCccCccCCCCC-CcchHHHHHHhhceeEEEE
Q 011080 434 DAMETGTVQINSAPSRGPDHFPFQGLKDSGIG-SQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 434 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i~~ 484 (494)
+++++|+|+||+++......+||||+|.||+| +++|++|+++|++.|++++
T Consensus 392 ~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 392 DRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 99999999999987755456899999999999 8889999999999999853
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-91 Score=752.30 Aligned_cols=465 Identities=22% Similarity=0.313 Sum_probs=412.5
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHH-hHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
++++||||+|+.+ ++..++++||+||+++++++.++ +|+++|+++|++| ++.|+++|..+|.++|++++++|+++++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4678999999875 45789999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccc-cCCCCCCCCC-ceEEEEeeec-eeEEeeCCCCc
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLV-SDSFPGNERT-KYCLTSKIPL-GVVLAIPPFNY 168 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~n~ 168 (494)
+|++ ++.|+|||+.+++.|+..+++.+++++..+.+......... .+..+....+ ...+..++|+ |||++|+||||
T Consensus 82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence 9998 59999999999999999999999999988766543211111 1111111111 2246788997 99999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcC-CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aG-lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+++|+.. ..+..++.++.|+|||| .+
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 99999999998532 33444567999999999 99
Q ss_pred HHHHHHH----cCCCceEEecCCcceEEEeCCCC-----HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHH
Q 011080 247 GISISKK----AGMIPLQMELGGKDACIILEDAD-----LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVK 317 (494)
Q Consensus 247 ~~~v~~~----a~~~~~~le~gG~~~~iV~~daD-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 317 (494)
|+.+++. ..++|+++|+|||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 317 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALR 317 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHH
Confidence 9999984 24799999999999999999995 99999999999999999999999999999999999999999
Q ss_pred HHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc---------CCCceeecEEEeeCCC--CCC
Q 011080 318 AKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK---------REGNLIWPLLLDNVRP--DMR 384 (494)
Q Consensus 318 ~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~---------~~g~~~~Ptvl~~~~~--~~~ 384 (494)
++++++++||| ++++++||++++.+.+++.++|++|+++ ++++ +|.. ..|+|++|||+.++++ ++.
T Consensus 318 ~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 318 ARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 99999999999 8899999999999999999999999999 8885 4421 2589999999999998 579
Q ss_pred CcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcc--cceEEECCCCCC--------CCCCC
Q 011080 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAME--TGTVQINSAPSR--------GPDHF 454 (494)
Q Consensus 385 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~--~g~v~iN~~~~~--------~~~~~ 454 (494)
+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+.+++++++ +|.|+||+.++. ..+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999997 999999976421 12458
Q ss_pred CccCccCCCCCCc-chHHHHHHhhceeEEEE
Q 011080 455 PFQGLKDSGIGSQ-GITNSINMMTKIKSTVI 484 (494)
Q Consensus 455 pfgG~~~SG~g~~-~g~~~l~~~~~~k~i~~ 484 (494)
||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 477 pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 477 VHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 9999999999999 56999999999999854
|
|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-91 Score=723.90 Aligned_cols=444 Identities=36% Similarity=0.569 Sum_probs=413.3
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 110 (494)
++||+||+++++++.++.+++++++++|++|++ .|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEc
Q 011080 111 EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190 (494)
Q Consensus 111 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlk 190 (494)
|+..+++.+++++....+..+... +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilk 153 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVI-------PVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLK 153 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeE
Confidence 999999999998876655433211 1111234577899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcc
Q 011080 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKD 267 (494)
Q Consensus 191 ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~ 267 (494)
||+.+|.++..|+++|.++|+|+|++|++++++.+.+..|..|++++.|+|||| .+++.+.+.+. .+|+++|+||||
T Consensus 154 ps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~ 233 (457)
T cd07114 154 PSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKS 233 (457)
T ss_pred CCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCC
Confidence 999999999999999999999999999999977778999999999999999999 99999998863 799999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 268 ~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
|+||++|||++.|++.|++++|.++||.|+++++||||++++++|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 234 ~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 313 (457)
T cd07114 234 PNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKV 313 (457)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 889999999999999999
Q ss_pred HHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceE
Q 011080 347 EGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 419 (494)
.+++++++++|++++ ++.. ..|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++
T Consensus 314 ~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~ 393 (457)
T cd07114 314 ERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAA 393 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCcee
Confidence 999999999999985 4422 247999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 420 ~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+|||+|.+.++++++++++|+|+||+..... ..+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 394 ~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 394 GIWTRDLARAHRVARAIEAGTVWVNTYRALS-PSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred EEECCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999876544 458999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-90 Score=721.62 Aligned_cols=444 Identities=34% Similarity=0.502 Sum_probs=413.2
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVV 113 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 113 (494)
+||+||+++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCC
Q 011080 114 RSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193 (494)
Q Consensus 114 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~ 193 (494)
.+++.+++++..+.++++...... ... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~ 156 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPT-GLL---MPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSE 156 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccC-ccc---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 999999999988877765432110 000 1235668899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEE
Q 011080 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACI 270 (494)
Q Consensus 194 ~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~i 270 (494)
.+|.++..|+++|.++|+|+|++++++|++ +.+..|+.| .+|.|+|||| .+|+.|.+.+ ..+|+++|+|||||+|
T Consensus 157 ~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~i 234 (453)
T cd07099 157 VTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMI 234 (453)
T ss_pred cchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 999999999999999999999999999965 788889987 5999999999 9999999876 3789999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHH
Q 011080 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGL 349 (494)
Q Consensus 271 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~ 349 (494)
|++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 789999999999999999999
Q ss_pred HHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCH
Q 011080 350 VMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426 (494)
Q Consensus 350 i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~ 426 (494)
+++++++|++++ +|.. .+|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDL 394 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCH
Confidence 999999999996 4433 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEECCCCCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 427 NKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 427 ~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
++++++++++++|.|+||+.++. .....||||+|.||+|+++|.+++++||+.|+|+
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 395 ARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 99999999999999999998653 3456999999999999999999999999999984
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-90 Score=719.66 Aligned_cols=442 Identities=34% Similarity=0.519 Sum_probs=409.7
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh-HHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA-KDAVTE 111 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~e 111 (494)
++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.+++++.....+.+... +. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKp 152 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETL-------PF-GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKA 152 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCcee-------cc-CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 99999999998877655443321 11 12345678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcce
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDA 268 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~ 268 (494)
|+.+|.++..+++++.++ +|+|++++++|++.+.+..|..||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||
T Consensus 153 s~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~ 231 (457)
T cd07108 153 AEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSP 231 (457)
T ss_pred CCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCe
Confidence 999999999999999985 9999999999977788999999999999999999 9999999987 37899999999999
Q ss_pred EEEeCCCCHHHHHHHHHHH-HhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKG-GFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFI 346 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~-~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~ 346 (494)
+||++|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++
T Consensus 232 ~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~ 311 (457)
T cd07108 232 MIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKV 311 (457)
T ss_pred eEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 9999999999999999999 49999999999999999999999999999999999999999 789999999999999999
Q ss_pred HHHHHHHHH-cCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCce
Q 011080 347 EGLVMDAKQ-KAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418 (494)
Q Consensus 347 ~~~i~~a~~-~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 418 (494)
.++++++++ +|++++ +|.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 312 ~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs 391 (457)
T cd07108 312 CGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLA 391 (457)
T ss_pred HHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCce
Confidence 999999998 999995 4422 35899999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHH-HHHhhceeEEEE
Q 011080 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNS-INMMTKIKSTVI 484 (494)
Q Consensus 419 a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~-l~~~~~~k~i~~ 484 (494)
++|||+|.+.++++++++++|.|+||++.... ...||||+|+||+|+++|.++ +++||+.|+|++
T Consensus 392 ~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~-~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~ 457 (457)
T cd07108 392 AYVWTRDLGRALRAAHALEAGWVQVNQGGGQQ-PGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457 (457)
T ss_pred eEEEcCCHHHHHHHHHhcCcceEEECCCCCCC-CCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence 99999999999999999999999999986543 458999999999999999866 799999999853
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-90 Score=717.49 Aligned_cols=441 Identities=30% Similarity=0.485 Sum_probs=410.1
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TE 111 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 111 (494)
++||+||+++++++.++.++++++++.|++|++.|+.+|..+|.++|+++++.|.+++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998875 69
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.+++++...+.+.+.... . ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKp 153 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAG---E----YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKP 153 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccC---c----cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEEC
Confidence 999999999998776654332110 0 011345678999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcce
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDA 268 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~~ 268 (494)
|+.+|.++..|.++|.+ |+|+|++|++++++.+.++.|+.|++++.|+|||| .+|+.+.+.+. ++|+++|+|||||
T Consensus 154 s~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p 232 (450)
T cd07092 154 SETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAP 232 (450)
T ss_pred CccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCe
Confidence 99999999999999999 99999999999977778999999999999999999 99999999874 7999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.
T Consensus 233 ~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~ 312 (450)
T cd07092 233 VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVA 312 (450)
T ss_pred eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred HHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecc
Q 011080 348 GLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~ 424 (494)
++|+++. +|++++.++. ..|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 313 ~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~ 391 (450)
T cd07092 313 GFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTR 391 (450)
T ss_pred HHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECC
Confidence 9999998 9999954332 36899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 425 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
|.+.+.++++++++|+|+||+..... ..+||||+|+||+|+++|++++++|++.|+|+
T Consensus 392 d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 392 DVGRAMRLSARLDFGTVWVNTHIPLA-AEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred CHHHHHHHHHhcCccEEEECCCCCCC-CCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999999999999999887654 44899999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-90 Score=718.54 Aligned_cols=447 Identities=32% Similarity=0.481 Sum_probs=409.7
Q ss_pred eCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHH
Q 011080 34 INPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEV 112 (494)
Q Consensus 34 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev 112 (494)
+||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|.+++++|+++++.|+|||+.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999996 599
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.+++++..+...+..... ... ........++.++|+|||++|+|||||+..+++++++||++||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps 156 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESR-PGG---LLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVS 156 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCccc-CCc---cccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99999999998876665432111 000 00113446788999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHH----HHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCC
Q 011080 193 TQGAVAALHMVHC----FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGG 265 (494)
Q Consensus 193 ~~~~~t~~~l~~~----l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG 265 (494)
+.+|+++..++++ |.++|+|+|++|+++|++ +++..|+.||+|+.|.|||| .+|+.+.+.+ ..+|+++|+||
T Consensus 157 ~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG 235 (465)
T cd07098 157 EQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGG 235 (465)
T ss_pred CcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCC
Confidence 9999999876655 468999999999999965 78999999999999999999 9999999876 47999999999
Q ss_pred cceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHH
Q 011080 266 KDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSAN 344 (494)
Q Consensus 266 ~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~ 344 (494)
|||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++.+++|+| ++++++||++++.+.+
T Consensus 236 ~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~ 315 (465)
T cd07098 236 KDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFD 315 (465)
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 8899999999999999
Q ss_pred HHHHHHHHHHHcCCEEeecc-c------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 011080 345 FIEGLVMDAKQKAATFCQEY-K------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417 (494)
Q Consensus 345 ~~~~~i~~a~~~Ga~v~~~~-~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 417 (494)
++.+++++++++|++++.++ . ..|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||
T Consensus 316 ~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 395 (465)
T cd07098 316 RLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGL 395 (465)
T ss_pred HHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 99999999999999995432 2 2489999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCHHHHHHHHhhcccceEEECCCCCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 418 QGCVFTRDINKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 418 ~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
+++|||+|.+.+.++++++++|.|+||+.++. .....||||+|.||+|+++|++++++|++.|+|+++
T Consensus 396 sa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 396 GASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred eEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999999999999999999987643 334589999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-90 Score=717.15 Aligned_cols=443 Identities=35% Similarity=0.552 Sum_probs=415.1
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEV 112 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 112 (494)
++||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCC
Q 011080 113 VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192 (494)
Q Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps 192 (494)
..+++.++++...+++..+... +....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps 153 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTI-------PSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPA 153 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCccc-------ccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 9999999999887766554321 111124567889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceE
Q 011080 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDAC 269 (494)
Q Consensus 193 ~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~ 269 (494)
+.+|.++..++++|.++|+|+|+++++++++.+.++.|..|+++|.|+|||| .+|+.+.+.+ ..+|+++|+|||||+
T Consensus 154 ~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~ 233 (451)
T cd07103 154 EETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPF 233 (451)
T ss_pred ccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeE
Confidence 9999999999999999999999999999977778899999999999999999 9999998876 479999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHH
Q 011080 270 IILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 270 iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~ 348 (494)
||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.+
T Consensus 234 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~ 313 (451)
T cd07103 234 IVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEA 313 (451)
T ss_pred EECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 88999999999999999999
Q ss_pred HHHHHHHcCCEEee-ccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC
Q 011080 349 LVMDAKQKAATFCQ-EYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d 425 (494)
++++++.+|++++. +.. .+|+|+.|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 314 ~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 393 (451)
T cd07103 314 LVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRD 393 (451)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence 99999999999954 322 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 426 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
.+.++++++++++|.|+||+++... ...||||+|+||+|+++|++++++|++.|+|.
T Consensus 394 ~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 394 LARAWRVAEALEAGMVGINTGLISD-AEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999987654 44899999999999999999999999999884
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-89 Score=707.76 Aligned_cols=421 Identities=33% Similarity=0.503 Sum_probs=393.6
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcC
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~ 132 (494)
+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++..+++++..
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999888877543
Q ss_pred ccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Q 011080 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFP 212 (494)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP 212 (494)
... +. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|
T Consensus 81 ~~~------~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP 152 (429)
T cd07100 81 EPI------ET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFP 152 (429)
T ss_pred eec------cC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCC
Confidence 211 11 1345678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHh
Q 011080 213 KGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGF 289 (494)
Q Consensus 213 ~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~ 289 (494)
+|++|+++|++ +.+..|+.|++++.|.|||| .+|+.|++.+ .+||+++|+|||||+||++|||++.|++.+++++|
T Consensus 153 ~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 153 EGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred cCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH
Confidence 99999999955 56788999999999999999 9999999887 47899999999999999999999999999999999
Q ss_pred hccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--
Q 011080 290 SYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-- 365 (494)
Q Consensus 290 ~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-- 365 (494)
.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.+++++++++|++++ ++..
T Consensus 232 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~ 311 (429)
T cd07100 232 QNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD 311 (429)
T ss_pred hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC
Confidence 999999999999999999999999999999999999999 789999999999999999999999999999995 4432
Q ss_pred CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECC
Q 011080 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445 (494)
Q Consensus 366 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~ 445 (494)
..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||+
T Consensus 312 ~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 391 (429)
T cd07100 312 GPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING 391 (429)
T ss_pred CCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence 24899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 446 APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 446 ~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+.... ..+||||+|+||+|+++|++++++||+.|+|+
T Consensus 392 ~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 392 MVKSD-PRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred CCCCC-CCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 87654 44899999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-89 Score=711.31 Aligned_cols=443 Identities=33% Similarity=0.521 Sum_probs=412.8
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HH
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TE 111 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 111 (494)
.+||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999886 49
Q ss_pred HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcC
Q 011080 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191 (494)
Q Consensus 112 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkp 191 (494)
+..+++.++++++...+..+.. ++.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkp 152 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGES-------YPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKP 152 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCcc-------ccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeEC
Confidence 9999999999888765533221 1111 2456678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcce
Q 011080 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDA 268 (494)
Q Consensus 192 s~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~~ 268 (494)
|+.+|+++..+.++|.++|+|+|++++++|++.+.++.|..|++++.|+|||| .+|+.+.+.+. ++|+++|+|||||
T Consensus 153 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~ 232 (455)
T cd07093 153 SEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP 232 (455)
T ss_pred CCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCc
Confidence 99999999999999999999999999999977788999999999999999999 99999999874 7999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHH
Q 011080 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 269 ~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~ 347 (494)
+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+| ++.+++||++++.+.+++.
T Consensus 233 ~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 312 (455)
T cd07093 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVL 312 (455)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7889999999999999999
Q ss_pred HHHHHHHHcCCEEeecc-c------CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 011080 348 GLVMDAKQKAATFCQEY-K------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~~~-~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 420 (494)
+++++++.+|++++.++ . ..|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 313 ~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~ 392 (455)
T cd07093 313 GYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAY 392 (455)
T ss_pred HHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEE
Confidence 99999999999995432 2 2489999999999999999999999999999999999999999999999999999
Q ss_pred EeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 421 v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
|||+|.+.++++++++++|+|+||+.....+ ..||||+|.||+|+++|.+|+++|++.|++++
T Consensus 393 i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~-~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 393 VWTRDLGRAHRVARRLEAGTVWVNCWLVRDL-RTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCCC-CCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999877654 48999999999999999999999999999853
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-88 Score=699.21 Aligned_cols=440 Identities=21% Similarity=0.295 Sum_probs=396.0
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHh--cCCCHHHH----HHHHHHHHHHHHHc
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSW--AKTPLWKR----AELLHKAAAILKEQ 89 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~ 89 (494)
+||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4899999874 4679999999999999999999999999999999999998 56779999 89999999999998
Q ss_pred --HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCC
Q 011080 90 --KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFN 167 (494)
Q Consensus 90 --~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 167 (494)
.++|++++++|+|||+.+++.|+..+++.+++++....+..+..... +....+...+++++|+|||++|+|||
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-----~~~~~~~~~~v~r~P~GVV~~I~PwN 153 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNV-----PGDHQGQQSSGYRWPYGPVAIITPFN 153 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-----CCCCCCceeEEEEecceEEEEECCCc
Confidence 59999999999999999999999999999999998776655432100 11112345689999999999999999
Q ss_pred chHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 168 YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 168 ~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
||+.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++|++.+ +..|+.|+++++|+|||| .+
T Consensus 154 fP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~v 232 (489)
T cd07126 154 FPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKV 232 (489)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999999999999999999999999999996655 455788999999999999 99
Q ss_pred HHHHHHHcCCCceEEecCCcceEEEeCCC-CHHHHHHHHHHHHhhccCCCccCccEEEEccch-HHHHHHHHHHHHhccc
Q 011080 247 GISISKKAGMIPLQMELGGKDACIILEDA-DLDLAAANIVKGGFSYSGQRCTAVKVALVMESV-ADTLVEKVKAKVAKLT 324 (494)
Q Consensus 247 ~~~v~~~a~~~~~~le~gG~~~~iV~~da-Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~ 324 (494)
|+.+...++ +++++|+||+||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.+++++
T Consensus 233 Gr~i~~~~g-~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~ 311 (489)
T cd07126 233 AERLALELH-GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRK 311 (489)
T ss_pred HHHHHHHhC-CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcc
Confidence 999998877 6799999999999999999 999999999999999999999999999999995 6899999999999998
Q ss_pred cCCCCCCCCCCccCCHHHHHHHHHHHHHHHH-cCCEEe-eccc--C----CC-ceeecEEEee------CCCCCCCcccc
Q 011080 325 VGAPEDDCDITPVVTESSANFIEGLVMDAKQ-KAATFC-QEYK--R----EG-NLIWPLLLDN------VRPDMRIAWEE 389 (494)
Q Consensus 325 ~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~-~~~~--~----~g-~~~~Ptvl~~------~~~~~~~~~~E 389 (494)
+|+ +++||+++.. .+++.++++++++ +|++++ +|.. . .+ .|++|||+.. ++++|++++||
T Consensus 312 ~g~----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eE 386 (489)
T cd07126 312 LED----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTE 386 (489)
T ss_pred cCC----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCC
Confidence 875 4799999998 8999999999997 899995 4432 1 23 3899999942 56799999999
Q ss_pred cccceeeeEecCC--HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccce--EEECCCCCCCCCC---CCccCccCC
Q 011080 390 PFGPVLPVIRINS--VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGT--VQINSAPSRGPDH---FPFQGLKDS 462 (494)
Q Consensus 390 ~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~--v~iN~~~~~~~~~---~pfgG~~~S 462 (494)
+||||++|++|+| +||||+++|+++|||++||||+|.+++.++++++++|+ |+||+.++..+.+ .||||+|+|
T Consensus 387 iFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~s 466 (489)
T cd07126 387 VFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGA 466 (489)
T ss_pred CcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCccc
Confidence 9999999999999 99999999999999999999999999999999999999 6699888766665 899999999
Q ss_pred CCCCcch
Q 011080 463 GIGSQGI 469 (494)
Q Consensus 463 G~g~~~g 469 (494)
|+|+++.
T Consensus 467 g~g~~~~ 473 (489)
T cd07126 467 GIGTPEA 473 (489)
T ss_pred CCCCHhH
Confidence 9999764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-88 Score=746.74 Aligned_cols=460 Identities=29% Similarity=0.472 Sum_probs=422.2
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCC-ceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRK-PHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~-~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+.+||| ++..++++||+|++ ++++++.++.+++++|+++|++|++.|+.+|..+|.++|+++++.|+++++
T Consensus 552 ~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~ 625 (1038)
T PRK11904 552 QAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRA 625 (1038)
T ss_pred eecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44557777 35679999999988 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|+.++++|+|||+.++..|+.+++++++|++..++++.+....+ ++. .+..++..++|+|||++|+|||||+.
T Consensus 626 eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l-----~g~-~ge~n~~~~~P~GVv~~IsPwNfPla 699 (1038)
T PRK11904 626 ELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKL-----PGP-TGESNELRLHGRGVFVCISPWNFPLA 699 (1038)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccc-----CCC-CCceeEEEEecceEEEEECCCccHHH
Confidence 999999999999999999999999999999999888776543221 221 24567889999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+++.|+|||| .+++.+
T Consensus 700 i~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I 779 (1038)
T PRK11904 700 IFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARII 779 (1038)
T ss_pred HHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999999999 999999
Q ss_pred HHHcC-----CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 251 SKKAG-----MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 251 ~~~a~-----~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.+.+. .+|+++|+||||++||++|||+|.|++.+++|+|.++||.|+++++||||++++|+|+++|+++++++++
T Consensus 780 ~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~v 859 (1038)
T PRK11904 780 NRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKV 859 (1038)
T ss_pred HHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 87652 5799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
||| ++++++||++++.+.+++.++|+++++ |++++ ++.. ..|+|+.|||+.. +++.++++|+||||++|++
T Consensus 860 Gdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~ 936 (1038)
T PRK11904 860 GDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIR 936 (1038)
T ss_pred CCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEE
Confidence 999 789999999999999999999999876 77885 4322 2489999999963 5677899999999999999
Q ss_pred cC--CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCC-CcchHHHHHH
Q 011080 400 IN--SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIG-SQGITNSINM 475 (494)
Q Consensus 400 ~~--~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g-~~~g~~~l~~ 475 (494)
|+ ++||+|+++|+++|||+++|||+|.+.+.++++++++|+|+||+..+... ...||||+|.||+| +.||++++++
T Consensus 937 ~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~ 1016 (1038)
T PRK11904 937 YKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLR 1016 (1038)
T ss_pred eCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHH
Confidence 98 69999999999999999999999999999999999999999999776543 33699999999999 6899999999
Q ss_pred hhceeEEEEecC
Q 011080 476 MTKIKSTVINLP 487 (494)
Q Consensus 476 ~~~~k~i~~~~~ 487 (494)
|++.|+|++++.
T Consensus 1017 f~~~ktv~~~~~ 1028 (1038)
T PRK11904 1017 FATEKTVTVNTT 1028 (1038)
T ss_pred HhceEEEEEccc
Confidence 999999998754
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-88 Score=694.74 Aligned_cols=420 Identities=28% Similarity=0.421 Sum_probs=389.0
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhc
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 131 (494)
+++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.+++++....++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999887776654
Q ss_pred CccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCC
Q 011080 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211 (494)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGl 211 (494)
.... + ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++|.++|+
T Consensus 81 ~~~~------~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~ 152 (431)
T cd07095 81 ERAT------P--MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGL 152 (431)
T ss_pred Cccc------C--CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCc
Confidence 3221 1 1145678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHH
Q 011080 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKG 287 (494)
Q Consensus 212 P~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~ 287 (494)
|+|++++++| +.+.+..|+.||+++.|+|||| .+|+.+.+.+. .+++.+|+|||||+||++|||++.|++.++++
T Consensus 153 P~g~~~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~ 231 (431)
T cd07095 153 PPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQS 231 (431)
T ss_pred ChhHheEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 9999999998 4578899999999999999999 99999988742 58999999999999999999999999999999
Q ss_pred HhhccCCCccCccEEEEccc-hHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-
Q 011080 288 GFSYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY- 364 (494)
Q Consensus 288 ~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~- 364 (494)
+|.|+||.|++++|||||++ ++|+|+++|+++++++++|+| ++.+.+||++++.+.+++.+++++++++|++++.++
T Consensus 232 ~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~ 311 (431)
T cd07095 232 AFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAME 311 (431)
T ss_pred HHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCC
Confidence 99999999999999999999 999999999999999999999 778999999999999999999999999999996433
Q ss_pred --cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEE
Q 011080 365 --KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQ 442 (494)
Q Consensus 365 --~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~ 442 (494)
..+|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+
T Consensus 312 ~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~ 390 (431)
T cd07095 312 RLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVN 390 (431)
T ss_pred cCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence 236899999999 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 443 INSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 443 iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
||+........+||||+|+||+|+++|.+|+++|++ |++
T Consensus 391 iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~-~~~ 429 (431)
T cd07095 391 WNRPTTGASSTAPFGGVGLSGNHRPSAYYAADYCAY-PVA 429 (431)
T ss_pred ECCCCCCCCCCCCCCCcccccCCCCChHHHHHHHhh-hhc
Confidence 998776555568999999999999999999996554 544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-87 Score=695.66 Aligned_cols=432 Identities=25% Similarity=0.357 Sum_probs=395.3
Q ss_pred CCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHH
Q 011080 47 ACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEE 125 (494)
Q Consensus 47 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 125 (494)
.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999996 6999999999999988
Q ss_pred hHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHH
Q 011080 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC 205 (494)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~ 205 (494)
.+++.+..... .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++
T Consensus 82 ~~~~~~~~~~~----~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~ 157 (484)
T PLN02203 82 LKKWMAPKKAK----LPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAAN 157 (484)
T ss_pred HHHHhcccccc----CCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH
Confidence 88876543111 01101134568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeC---CCCHHH
Q 011080 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILE---DADLDL 279 (494)
Q Consensus 206 l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~---daDl~~ 279 (494)
|.++ +|+|++|+++| +.+++..|..|+ ++.|+|||| .+|+.|++.+ .++|+++|+|||||+||++ |||++.
T Consensus 158 ~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~ 234 (484)
T PLN02203 158 IPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKV 234 (484)
T ss_pred HHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHH
Confidence 9985 99999999998 678999999995 999999999 9999999887 4799999999999999997 699999
Q ss_pred HHHHHHHHHhh-ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCC
Q 011080 280 AAANIVKGGFS-YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAA 358 (494)
Q Consensus 280 aa~~i~~~~~~-~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga 358 (494)
|++.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|||.+.+++||++++.+++++++++++++++ +
T Consensus 235 aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 235 AVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 99999999996 899999999999999999999999999999999999994457899999999999999999999887 5
Q ss_pred EE-eecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc
Q 011080 359 TF-CQEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM 436 (494)
Q Consensus 359 ~v-~~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~ 436 (494)
++ .+|. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++
T Consensus 314 ~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l 393 (484)
T PLN02203 314 SIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSET 393 (484)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 56 4443 236899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEECCCCCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 437 ETGTVQINSAPSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 437 ~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
++|.|+||++... .+..+||||+|+||+|+++|.+++++||+.|+|+++.
T Consensus 394 ~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 394 SSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999987653 3456899999999999999999999999999998774
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=694.67 Aligned_cols=426 Identities=39% Similarity=0.601 Sum_probs=396.7
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhc
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 131 (494)
|++++++.|++|++.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..+++.|+..+++.+++++....+..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999887655433
Q ss_pred CccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHH-HHHHHHHHHHcC
Q 011080 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA-ALHMVHCFHLAG 210 (494)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t-~~~l~~~l~~aG 210 (494)
... +....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+ +..+.++|.++|
T Consensus 81 ~~~-------~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG 153 (431)
T cd07104 81 EIL-------PSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAG 153 (431)
T ss_pred ccc-------cCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcC
Confidence 211 111124556889999999999999999999999999999999999999999999998 578999999999
Q ss_pred CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHH
Q 011080 211 FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKG 287 (494)
Q Consensus 211 lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~ 287 (494)
+|+|++|++++++.+++..|+.||+++.|.|||| .+++.+.+.+ ..+|+++|+|||||+||++|||++.|++.++++
T Consensus 154 lP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~ 233 (431)
T cd07104 154 LPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFG 233 (431)
T ss_pred CCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHH
Confidence 9999999999987778999999999999999999 9999998876 479999999999999999999999999999999
Q ss_pred HhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccC
Q 011080 288 GFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR 366 (494)
Q Consensus 288 ~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~ 366 (494)
+|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++.+||++++.+.+++.+++++++++|+++..++..
T Consensus 234 ~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~ 313 (431)
T cd07104 234 AFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY 313 (431)
T ss_pred HHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC
Confidence 99999999999999999999999999999999999999999 77899999999999999999999999999999655555
Q ss_pred CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCC
Q 011080 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 446 (494)
Q Consensus 367 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~ 446 (494)
+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 447 PSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 447 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+......+||||+|.||+|+++|++|+++|++.|++++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 87554568999999999999999999999999999853
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-87 Score=688.94 Aligned_cols=426 Identities=28% Similarity=0.364 Sum_probs=389.2
Q ss_pred CCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHh
Q 011080 48 CTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEG 126 (494)
Q Consensus 48 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 126 (494)
.+.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999998 59999999999999887
Q ss_pred HHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH
Q 011080 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206 (494)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l 206 (494)
..+........ ...+ ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++
T Consensus 82 ~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~ 158 (436)
T cd07135 82 KKWAKDEKVKD-GPLA--FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELV 158 (436)
T ss_pred HHhhCCcccCC-cccc--cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHH
Confidence 76654322110 0000 11345678999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHH
Q 011080 207 HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAAN 283 (494)
Q Consensus 207 ~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~ 283 (494)
.+ |+|+|++|+++|++.+.+ .|+.|| ++.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|||++.|++.
T Consensus 159 ~~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 159 PK-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred HH-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 99 799999999998666654 588999 999999999 9999998876 47999999999999999999999999999
Q ss_pred HHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-e
Q 011080 284 IVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC-Q 362 (494)
Q Consensus 284 i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~ 362 (494)
+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|++++.+||++++.+.+++.++++++ |++++ +
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~g 312 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIG 312 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEEC
Confidence 9999999999999999999999999999999999999999999997788999999999999999999987 77775 4
Q ss_pred ccc-CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceE
Q 011080 363 EYK-REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441 (494)
Q Consensus 363 ~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v 441 (494)
|.. .+|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|
T Consensus 313 g~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v 392 (436)
T cd07135 313 GEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGV 392 (436)
T ss_pred CCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeE
Confidence 422 3589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 442 QINSAPSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 442 ~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||+.+.. .....||||+|+||+|+++|.+|+++|++.|+|
T Consensus 393 ~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i 434 (436)
T cd07135 393 VINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTV 434 (436)
T ss_pred EECCccccccCCCCCcCCcCcccCCccccHhHHHHhcccccc
Confidence 99987653 234589999999999999999999999999987
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-87 Score=681.50 Aligned_cols=400 Identities=31% Similarity=0.471 Sum_probs=371.9
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeece
Q 011080 79 LHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLG 158 (494)
Q Consensus 79 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 158 (494)
|+++++.|++++++|++++++|+|||+.+++.|+..+++.+++++.++....+.... ....+...+++++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~P~G 73 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ-------SDRPGENILLFKRALG 73 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-------CCCCCceeEEEEeccc
Confidence 578999999999999999999999999999999999999999999887765543211 1111345678899999
Q ss_pred eEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccE
Q 011080 159 VVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINC 238 (494)
Q Consensus 159 Vv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~ 238 (494)
||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+++..|..||+++.
T Consensus 74 vv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~ 153 (409)
T PRK10090 74 VTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAM 153 (409)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999977888999999999999
Q ss_pred EEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHH
Q 011080 239 ISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEK 315 (494)
Q Consensus 239 v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 315 (494)
|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus 154 V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~ 233 (409)
T PRK10090 154 VSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 233 (409)
T ss_pred EEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHH
Confidence 999999 9999999876 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCC-CC-CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c--CCCceeecEEEeeCCCCCCCccccc
Q 011080 316 VKAKVAKLTVGAP-ED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K--REGNLIWPLLLDNVRPDMRIAWEEP 390 (494)
Q Consensus 316 l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~--~~g~~~~Ptvl~~~~~~~~~~~~E~ 390 (494)
|+++++++++||| ++ ++++||++++.++++++++|++++++|+++..++ . ..|+|++|||+.+++++|++++||+
T Consensus 234 l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~ 313 (409)
T PRK10090 234 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEET 313 (409)
T ss_pred HHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCC
Confidence 9999999999999 66 8999999999999999999999999999995433 2 2478999999999999999999999
Q ss_pred ccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchH
Q 011080 391 FGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGIT 470 (494)
Q Consensus 391 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~ 470 (494)
||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||+.....+. .||||+|+||+|+++|.
T Consensus 314 FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~-~pfGG~k~SG~G~~~g~ 392 (409)
T PRK10090 314 FGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQ-GFHAGWRKSGIGGADGK 392 (409)
T ss_pred CCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCC-CCcCCcccccCCccchH
Confidence 99999999999999999999999999999999999999999999999999999998765544 79999999999999999
Q ss_pred HHHHHhhceeEEEEec
Q 011080 471 NSINMMTKIKSTVINL 486 (494)
Q Consensus 471 ~~l~~~~~~k~i~~~~ 486 (494)
+|+++|++.|+|++++
T Consensus 393 ~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 393 HGLHEYLQTQVVYLQS 408 (409)
T ss_pred HHHHHhcceEEEEEec
Confidence 9999999999998865
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-86 Score=687.48 Aligned_cols=422 Identities=36% Similarity=0.545 Sum_probs=389.8
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhc
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 131 (494)
|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++.....+.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999887765422
Q ss_pred CccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCC
Q 011080 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211 (494)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGl 211 (494)
... +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++|+
T Consensus 81 ~~~-------~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGl 153 (432)
T cd07105 81 GSI-------PSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGL 153 (432)
T ss_pred eec-------ccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCc
Confidence 211 1111234567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEecCCc---hhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHH
Q 011080 212 PKGLISCVTGKG---SEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIV 285 (494)
Q Consensus 212 P~g~i~~v~g~~---~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~ 285 (494)
|+|++|+++++. .+++..|+.||+++.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|+|++.|++.++
T Consensus 154 P~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~ 233 (432)
T cd07105 154 PKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAAL 233 (432)
T ss_pred CCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHH
Confidence 999999999852 457899999999999999999 9999999876 4799999999999999999999999999999
Q ss_pred HHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-ecc
Q 011080 286 KGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEY 364 (494)
Q Consensus 286 ~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~ 364 (494)
+++|.|+||.|+++++||||++++|+|+++|+++++++++| .+++||++++.+.+++.+++++++++|++++ ++.
T Consensus 234 ~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~ 309 (432)
T cd07105 234 FGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGL 309 (432)
T ss_pred HHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 99999999999999999999999999999999999999988 5789999999999999999999999999995 433
Q ss_pred c---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceE
Q 011080 365 K---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441 (494)
Q Consensus 365 ~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v 441 (494)
. ..|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|
T Consensus 310 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v 389 (432)
T cd07105 310 ADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAV 389 (432)
T ss_pred cCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeE
Confidence 2 3589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 442 QINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 442 ~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+||+++......+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 390 ~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 390 HINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred EECCCCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 9999876544558999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-86 Score=689.41 Aligned_cols=430 Identities=25% Similarity=0.356 Sum_probs=392.1
Q ss_pred CCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHH
Q 011080 47 ACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEE 125 (494)
Q Consensus 47 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 125 (494)
..+.+++++++++|+++|+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999999999996 5999999999999998
Q ss_pred hHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHH
Q 011080 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC 205 (494)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~ 205 (494)
.++++....... +........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++
T Consensus 83 ~~~~~~~~~~~~----~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~l 158 (493)
T PTZ00381 83 LDEYLKPEKVDT----VGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL 158 (493)
T ss_pred HHHHhCCcccCC----ccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHH
Confidence 888876532110 1001123568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHH
Q 011080 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAA 282 (494)
Q Consensus 206 l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~ 282 (494)
+.++ +|+|++++++| +.+.+..|+.|+ +|.|+|||| .+|+.|++.+ .++|+++|+|||||+||++|||++.|++
T Consensus 159 l~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~ 235 (493)
T PTZ00381 159 LTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAAR 235 (493)
T ss_pred HHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHH
Confidence 9985 99999999998 677888899887 999999999 9999999876 4799999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-
Q 011080 283 NIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC- 361 (494)
Q Consensus 283 ~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~- 361 (494)
.+++++|.|+||.|+++++||||++++|+|+++|++.++++..+++++++++||+++..+.+++.++++ ++|++++
T Consensus 236 ~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 236 RIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 999999999999999999999999999999999999999986334478899999999999999999996 3577774
Q ss_pred ecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccce
Q 011080 362 QEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGT 440 (494)
Q Consensus 362 ~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~ 440 (494)
+|. +..++|++|||+.++++++++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|.
T Consensus 313 gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~ 392 (493)
T PTZ00381 313 GGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGA 392 (493)
T ss_pred CCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 442 2357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 441 VQINSAPSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 441 v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
|+||+...+ ....+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 393 v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 393 VVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred EEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 999987653 3456899999999999999999999999999998774
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-86 Score=681.25 Aligned_cols=421 Identities=26% Similarity=0.351 Sum_probs=384.4
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++..+.++....
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999999999999999999999999996 599999999999998876655432
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
... .+........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+++++|.+ ++|+
T Consensus 83 ~~~----~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~-~~P~ 157 (432)
T cd07137 83 KVK----TPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE-YLDT 157 (432)
T ss_pred ccC----CCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH-hCCc
Confidence 110 01101123567889999999999999999999999999999999999999999999999999999999 5999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHh-
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGF- 289 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~- 289 (494)
|++|+++| +.+.+..|+.| .++.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 158 gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~ 235 (432)
T cd07137 158 KAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWG 235 (432)
T ss_pred CeEEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhh
Confidence 99999999 55678889887 6999999999 9999998877 47999999999999999999999999999999999
Q ss_pred hccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc-CC
Q 011080 290 SYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-RE 367 (494)
Q Consensus 290 ~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-~~ 367 (494)
.|+||.|++++|+|||++++|+|+++|+++++++++|||++.+++||++++.+.+++.++++++++ |+++. ++.. ..
T Consensus 236 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~~~ 314 (432)
T cd07137 236 CNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERDEK 314 (432)
T ss_pred ccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcCCC
Confidence 599999999999999999999999999999999999999668899999999999999999999998 88885 4432 35
Q ss_pred CceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCC
Q 011080 368 GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 447 (494)
Q Consensus 368 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~ 447 (494)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||++.
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 394 (432)
T cd07137 315 NLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTV 394 (432)
T ss_pred CCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 448 SR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 448 ~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
.. ....+||||+|+||+|+++|.+++++|++.|+|+
T Consensus 395 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 395 VQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred ccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 53 3355899999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=680.30 Aligned_cols=419 Identities=29% Similarity=0.396 Sum_probs=382.5
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
+.+++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++..++.+.+..
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999999999997 599999999999998887776542
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
... .... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+
T Consensus 82 ~~~--~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~ 156 (449)
T cd07136 82 RVK--TPLL--NFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156 (449)
T ss_pred ccC--Cccc--cCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCC
Confidence 110 0000 11345688999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
|++|+++| +.+.+..|+.|+ ++.|+|||| .+|+.+.+.+ ..+|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~ 234 (449)
T cd07136 157 EYVAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFL 234 (449)
T ss_pred CEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHc
Confidence 99999998 556788888775 999999999 9999999876 379999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc-CCC
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK-REG 368 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~-~~g 368 (494)
|+||.|++++|||||++++|+|+++|+++++++++|+|.+.+++||++++.+.++++++++++ ++ ++|.. .+|
T Consensus 235 ~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~~g 309 (449)
T cd07136 235 NAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDRET 309 (449)
T ss_pred ccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCCCC
Confidence 999999999999999999999999999999999999994488999999999999999999864 56 44432 358
Q ss_pred ceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCC
Q 011080 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448 (494)
Q Consensus 369 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~ 448 (494)
+|+.|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+...
T Consensus 310 ~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~ 389 (449)
T cd07136 310 LYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIM 389 (449)
T ss_pred CEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CC-CCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 449 RG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 449 ~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
.. ...+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 390 HLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred cccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 32 24589999999999999999999999999999887
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-85 Score=730.66 Aligned_cols=448 Identities=27% Similarity=0.444 Sum_probs=414.9
Q ss_pred cceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 15 KFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 15 ~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
..+|+|+.. .+..++++||+| ++++++++.++.+++++|++.|++|++.|+.+|..+|.++|+++++.|++++++|
T Consensus 556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL 632 (1208)
T PRK11905 556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPEL 632 (1208)
T ss_pred cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 446666543 245789999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHH
Q 011080 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 173 (494)
+.++++|+||++.++..|+.+++++++|++..++..... ..++|+|||++|+|||||+.+.
T Consensus 633 ~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~~-------------------~~~~P~GVv~~IsPwNfPlai~ 693 (1208)
T PRK11905 633 FALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNG-------------------PGHKPLGPVVCISPWNFPLAIF 693 (1208)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------ceecCccEEEEEcCCcCHHHHH
Confidence 999999999999999999999999999999876543211 3467999999999999999999
Q ss_pred HhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHH
Q 011080 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252 (494)
Q Consensus 174 ~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~ 252 (494)
++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+++..|+.||+|+.|+|||| .+++.|.+
T Consensus 694 ~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~ 773 (1208)
T PRK11905 694 TGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQR 773 (1208)
T ss_pred HHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999 99999988
Q ss_pred HcC-----CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 253 KAG-----MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 253 ~a~-----~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
.+. .+|+++|+||||++||++|||+|.|++.+++|+|.++||+|++++++|||++++|+|+++|+++++++++||
T Consensus 774 ~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGd 853 (1208)
T PRK11905 774 TLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGD 853 (1208)
T ss_pred HHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCC
Confidence 752 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecC-
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN- 401 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~- 401 (494)
| +..+++||++++.+.+++.++|++++++|+.+.++.. ..|+|+.|||+. + +++.++++|+||||++|++|+
T Consensus 854 P~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~ 931 (1208)
T PRK11905 854 PWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKA 931 (1208)
T ss_pred chhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCC
Confidence 9 7799999999999999999999999999998865432 359999999997 3 567889999999999999998
Q ss_pred -CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCCC-cchHHHHHHhhc
Q 011080 402 -SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIGS-QGITNSINMMTK 478 (494)
Q Consensus 402 -~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g~-~~g~~~l~~~~~ 478 (494)
++||+|+++|+++|||+++|||+|.+.+.++.+++++|+|+||+..+... ...||||+|.||+|. .||+++|.+|++
T Consensus 932 ~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~ 1011 (1208)
T PRK11905 932 DELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVR 1011 (1208)
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhh
Confidence 69999999999999999999999999999999999999999999776543 347999999999995 899999999999
Q ss_pred eeEEEEec
Q 011080 479 IKSTVINL 486 (494)
Q Consensus 479 ~k~i~~~~ 486 (494)
.|+++++.
T Consensus 1012 ~k~v~~~~ 1019 (1208)
T PRK11905 1012 EAPTPIPP 1019 (1208)
T ss_pred cceeeccc
Confidence 99998764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-85 Score=672.31 Aligned_cols=420 Identities=28% Similarity=0.392 Sum_probs=382.4
Q ss_pred HHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCC-hHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 56 VVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 56 av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
.+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.+++++..+.+++...
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56775 699999999999998877766543
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
.... . .. ......++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++ +|+
T Consensus 83 ~~~~-~-~~--~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~ 157 (434)
T cd07133 83 RRHV-G-LL--FLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDE 157 (434)
T ss_pred ccCC-c-cc--cCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCc
Confidence 2110 0 00 11334678999999999999999999999999999999999999999999999999999999997 999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
|++++++| +.+++..|..|+ ++.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|+|++.|++.+++++|+
T Consensus 158 g~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~ 235 (434)
T cd07133 158 DEVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235 (434)
T ss_pred CeEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence 99999998 457888888776 999999999 9999999876 478999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc----
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK---- 365 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~---- 365 (494)
|+||.|++++|||||++++|+|+++|+++++++++|+ .+++++||++++.+.+++.+++++++++|++++ +|..
T Consensus 236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 9999999999999999999999999999999999886 467889999999999999999999999999995 4432
Q ss_pred CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECC
Q 011080 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445 (494)
Q Consensus 366 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~ 445 (494)
.+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|.|+||+
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~ 394 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIND 394 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 25899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 446 APS-RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 446 ~~~-~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
... .....+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 395 ~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 395 TLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 764 23355899999999999999999999999999873
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-85 Score=728.21 Aligned_cols=442 Identities=28% Similarity=0.436 Sum_probs=408.2
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
-+|+|+. ..+..++++||+| ++++++++.++.++++.|+++|++|++.|+.+|..+|.++|++++++|++++++|+
T Consensus 649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~ 725 (1318)
T PRK11809 649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLM 725 (1318)
T ss_pred CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 4566632 2456899999998 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
.++++|+|||+.++..|+.+++++++|++..++.... ...++|+|||++|+|||||+.+++
T Consensus 726 ~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~-------------------~~~~~PlGVV~~IsPWNFPlai~~ 786 (1318)
T PRK11809 726 GLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD-------------------NDTHRPLGPVVCISPWNFPLAIFT 786 (1318)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------------CceeecccEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999887654211 135789999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.||+|++|+|||| .+|+.|.+.
T Consensus 787 g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 787 GQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988889999999999999999999 999999886
Q ss_pred cC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 254 AG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 254 a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
+. .+|+++|+||+|++||++|||+|.|++.+++|+|.++||+|++.+++|||++++|+|++.|+++++++++
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~v 946 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRM 946 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 42 2799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c-----CCCceeecEEEeeCCCCCCCcccccccceeeeE
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 398 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 398 (494)
||| +..+++||++++.+.+++.++|++++++|++++.+. . ..|+|+.|||+.. +++.++++|+||||+.|+
T Consensus 947 GdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~ 1024 (1318)
T PRK11809 947 GNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVV 1024 (1318)
T ss_pred CCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEE
Confidence 999 789999999999999999999999999999986432 1 3599999999974 567889999999999999
Q ss_pred ecC--CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCCC-cchHHHHH
Q 011080 399 RIN--SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIGS-QGITNSIN 474 (494)
Q Consensus 399 ~~~--~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g~-~~g~~~l~ 474 (494)
+|+ ++||+|+++|+++|||+++|||+|.+.+.++++++++|+|+||....... ...||||+|.||+|. .||++++.
T Consensus 1025 ~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~ 1104 (1318)
T PRK11809 1025 RYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLY 1104 (1318)
T ss_pred EeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHH
Confidence 997 79999999999999999999999999999999999999999998765432 336999999999995 79999999
Q ss_pred HhhceeE
Q 011080 475 MMTKIKS 481 (494)
Q Consensus 475 ~~~~~k~ 481 (494)
.|++.+.
T Consensus 1105 ~f~~~~~ 1111 (1318)
T PRK11809 1105 RLLATRP 1111 (1318)
T ss_pred HHhccCC
Confidence 9999874
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=670.42 Aligned_cols=422 Identities=27% Similarity=0.380 Sum_probs=386.7
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++.....+....
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999997 699999999999988766655432
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
... . +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.++ +|+
T Consensus 82 ~~~--~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~ 156 (433)
T cd07134 82 RVR--T--PLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDE 156 (433)
T ss_pred ccC--C--ccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCc
Confidence 110 0 11112345689999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
|++++++| +.+.+..|+.|+ ++.|+|||| .+|+.+.+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 157 g~v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~ 234 (433)
T cd07134 157 DEVAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFL 234 (433)
T ss_pred CEEEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhc
Confidence 99999999 567889999998 999999999 9999999876 378999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC--CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c-C
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP--EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K-R 366 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p--~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~-~ 366 (494)
++||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||++++.+.+++.++|++++++|++++.|+ . .
T Consensus 235 ~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~ 314 (433)
T cd07134 235 NAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA 314 (433)
T ss_pred CcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC
Confidence 99999999999999999999999999999999988885 568899999999999999999999999999995433 2 3
Q ss_pred CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCC
Q 011080 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSA 446 (494)
Q Consensus 367 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~ 446 (494)
.|+|++|||+.++++++++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.+.+.++++++++|.|+||+.
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 447 PSR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 447 ~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
+.. ..+..||||+|+||+|+++|.+++++||+.|+|+
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 753 3345899999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=664.57 Aligned_cols=421 Identities=25% Similarity=0.387 Sum_probs=381.0
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++++++.+..+....
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 699999999999998887776432
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
.. ..... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++ +|+
T Consensus 82 ~~--~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~ 156 (443)
T cd07132 82 PV--KKNLA--TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDK 156 (443)
T ss_pred cC--CCccc--cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCc
Confidence 21 00001 11234688899999999999999999999999999999999999999999999999999999985 999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
|++|++++++. .+..|+. +++|.|+|||| .+|+.+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 157 gv~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~ 234 (443)
T cd07132 157 ECYPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFI 234 (443)
T ss_pred CeEEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHh
Confidence 99999999544 4556665 58999999999 9999998876 479999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc-CCC
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK-REG 368 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~-~~g 368 (494)
|+||.|++++|||||++++|+|+++|++++++++.|+|++.+++||++++.+.+++.+++++ +++ .++.. ..|
T Consensus 235 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~~~ 309 (443)
T cd07132 235 NAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDEKE 309 (443)
T ss_pred cCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCCCC
Confidence 99999999999999999999999999999999999998888999999999999999999874 356 44432 358
Q ss_pred ceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCC
Q 011080 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448 (494)
Q Consensus 369 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~ 448 (494)
+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|.|+||++..
T Consensus 310 ~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~ 389 (443)
T cd07132 310 RYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIM 389 (443)
T ss_pred CEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CC-CCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecC
Q 011080 449 RG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 449 ~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
.. ...+||||+|+||+|+++|.+|+++|++.|+|++++.
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 390 HYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred ccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccc
Confidence 33 2458999999999999999999999999999988753
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=655.90 Aligned_cols=417 Identities=27% Similarity=0.424 Sum_probs=378.4
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
.++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++....++.+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3889999999999999999999999999999999999999999999999988775 599999999999988776655432
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
.... +....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.+++++|.+ |+|+
T Consensus 82 ~~~~----~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~ 156 (426)
T cd07087 82 RVSV----PLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDP 156 (426)
T ss_pred ccCC----ccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCC
Confidence 1100 0001134567889999999999999999999999999999999999999999999999999999999 7999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
|++++++|+ .+.+..|+.|| ++.|+|||| .+++.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 157 gv~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 234 (426)
T cd07087 157 EAVAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL 234 (426)
T ss_pred CEEEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHh
Confidence 999999984 46688999998 999999999 9999999876 478999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc-CCC
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK-REG 368 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~-~~g 368 (494)
++||.|+++++||||++++|+|+++|++.+++++.|+|++.+++||++++.+.+++.++++++ ++ ++|.. ..|
T Consensus 235 ~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~~g 309 (426)
T cd07087 235 NAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDKEE 309 (426)
T ss_pred ccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCCCC
Confidence 999999999999999999999999999999999877777789999999999999999999865 55 44432 358
Q ss_pred ceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCC
Q 011080 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448 (494)
Q Consensus 369 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~ 448 (494)
+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+.+.
T Consensus 310 ~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 389 (426)
T cd07087 310 RYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLL 389 (426)
T ss_pred CEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred C-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 449 R-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 449 ~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
. .....||||+|.||+|+++|.+++++|++.|+|+
T Consensus 390 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 390 HAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred ccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 3 2355899999999999999999999999999873
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-81 Score=590.47 Aligned_cols=455 Identities=29% Similarity=0.433 Sum_probs=421.3
Q ss_pred CCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh
Q 011080 26 SSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA 105 (494)
Q Consensus 26 ~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 105 (494)
.+...++.+.|+||+.+++++..++.|+++.+..|++||+.|.+.+++.|.++|+.+.+.+.+|+|.+++..++++||+.
T Consensus 61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTm 140 (583)
T KOG2454|consen 61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTM 140 (583)
T ss_pred CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchh
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcC
Q 011080 106 KDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAG 184 (494)
Q Consensus 106 ~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aG 184 (494)
.+| .+|+..+.+.+.|.....++++.......... ..-...++.++|+||++.|.|||||+.+.+.+++.||.+|
T Consensus 141 vDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~----~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsG 216 (583)
T KOG2454|consen 141 VDASLGEILVTLEKITWTLSEGERWLKPESRPNGRA----MLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSG 216 (583)
T ss_pred hhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhh----eeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcC
Confidence 987 58999999999999999988887654321111 1124467899999999999999999999999999999999
Q ss_pred CEEEEcCCCCChHHHHHHHH----HHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCC
Q 011080 185 NSIVLKPPTQGAVAALHMVH----CFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMI 257 (494)
Q Consensus 185 N~vvlkps~~~~~t~~~l~~----~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~ 257 (494)
|++|+|-|+.+.+++....+ +|+..|-|+++++++++ -++.+++|.+|++++.+.|.|| .+++.+.+.+ .++
T Consensus 217 NaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LT 295 (583)
T KOG2454|consen 217 NAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLT 295 (583)
T ss_pred CeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcC
Confidence 99999999999888766555 55677999999999999 4688999999999999999999 9999999877 489
Q ss_pred ceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCc
Q 011080 258 PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITP 336 (494)
Q Consensus 258 ~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gp 336 (494)
|+++|+|||++.||.+|+|++..+..++++.|..+||.|...+|++||+++||.|+..|-++++.++.|.| ....+||.
T Consensus 296 Pv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGA 375 (583)
T KOG2454|consen 296 PVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGA 375 (583)
T ss_pred cEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 78999999
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCEEeecc-------cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHH
Q 011080 337 VVTESSANFIEGLVMDAKQKAATFCQEY-------KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHH 409 (494)
Q Consensus 337 l~~~~~~~~~~~~i~~a~~~Ga~v~~~~-------~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 409 (494)
+++..+++.++.++++|+.+||++..++ .+.|.|++||++.+++++|.+++||.||||+.++++++.|++|++
T Consensus 376 m~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~l 455 (583)
T KOG2454|consen 376 MCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKL 455 (583)
T ss_pred hhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhh
Confidence 9999999999999999999999996443 247999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 410 CNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 410 ~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
+|+++|||+++||+.|..++.++++++++|+|.||+..+.-...+||||+|.||+||.+|.+||+..++.|+|...
T Consensus 456 AN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 456 ANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 9999999999999999999999999999999999999875556699999999999999999999999999999665
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-79 Score=640.05 Aligned_cols=432 Identities=20% Similarity=0.246 Sum_probs=371.6
Q ss_pred eeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH--
Q 011080 33 IINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-- 110 (494)
Q Consensus 33 v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-- 110 (494)
=+||+|++++++++.++. ++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 69 ERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 369999999999999995 899999999999999999999999999999999999999999999999999998863
Q ss_pred ---HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEE
Q 011080 111 ---EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187 (494)
Q Consensus 111 ---ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~v 187 (494)
++.+.++.++|++....++.+...+..+..... ......+..++|+|||++|+|||||+++.++++++||++||+|
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~V 224 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKND-PLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPV 224 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCC-cccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeE
Confidence 777889999998887776655432111110000 0011223578999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHH----HHHHHHHHcCCCCCcEEEecCC-chhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEE
Q 011080 188 VLKPPTQGAVAAL----HMVHCFHLAGFPKGLISCVTGK-GSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQM 261 (494)
Q Consensus 188 vlkps~~~~~t~~----~l~~~l~~aGlP~g~i~~v~g~-~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~l 261 (494)
|+|||+.+|+++. .+.++|.++|+|+|++|+++++ +.++++.|+.||+|+.|.|||| .+|+.|.+.+..+++++
T Consensus 225 VlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~~~v~l 304 (551)
T TIGR02288 225 LVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQVYT 304 (551)
T ss_pred EEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcccCcEEe
Confidence 9999999999655 5679999999999999999985 6788999999999999999999 99999999988899999
Q ss_pred ecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccc---------hHHHHHHHHHHHHhccccCCC-CCC
Q 011080 262 ELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES---------VADTLVEKVKAKVAKLTVGAP-EDD 331 (494)
Q Consensus 262 e~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~p-~~~ 331 (494)
|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++ +||| ++.
T Consensus 305 ElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~ 383 (551)
T TIGR02288 305 EKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARAT 383 (551)
T ss_pred ecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccc
Confidence 9999999999999999999999999999999999999999999999 7999999999999999 9999 778
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccC-----CC-ceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 332 CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-----EG-NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 332 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~-----~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
+++||++++.+++++ ++++++|..+++|... +| +|++|||+...+++|++++||+||||++|++|+|.||
T Consensus 384 ~~~Gplis~~~~~ri----~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~de 459 (551)
T TIGR02288 384 AVLGAIQSPDTLARI----AEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAH 459 (551)
T ss_pred ccccCcCCHHHHHHH----HHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHH
Confidence 999999999999885 5677788666655321 35 5889999953334999999999999999999999999
Q ss_pred HHHHHhcC--CCC-ceEEEeccCHHHHHHHHhhc----------ccceEEECCCCCCCCCCCCccCccCCCCCCcch-HH
Q 011080 406 GIHHCNAS--NFG-LQGCVFTRDINKAILISDAM----------ETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGI-TN 471 (494)
Q Consensus 406 ai~~~n~~--~~g-l~a~v~s~d~~~~~~~~~~~----------~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g-~~ 471 (494)
||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||+. .||++.+.||...-.+ .+
T Consensus 460 Ai~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~-------~~~~~~~~sg~n~~a~~~~ 532 (551)
T TIGR02288 460 AVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS-------AAFSDFHGTGGNPAANASL 532 (551)
T ss_pred HHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC-------CCCCCCCCCCCCCccCCcc
Confidence 99999998 566 99999999999999999999 7777777763 4677777777664432 33
Q ss_pred HHHHhhcee
Q 011080 472 SINMMTKIK 480 (494)
Q Consensus 472 ~l~~~~~~k 480 (494)
.--.|...+
T Consensus 533 ~~~~~~~~r 541 (551)
T TIGR02288 533 SDGAFVANR 541 (551)
T ss_pred cchhhhhcc
Confidence 444455444
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-79 Score=635.36 Aligned_cols=418 Identities=21% Similarity=0.213 Sum_probs=368.2
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcC
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~ 132 (494)
+++|+++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++..++.....
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998776542111
Q ss_pred ccccccCCCCC--CCCCceEEEEeeeceeEEeeCCCCchHHH--HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH--
Q 011080 133 GKLLVSDSFPG--NERTKYCLTSKIPLGVVLAIPPFNYPVNL--AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF-- 206 (494)
Q Consensus 133 ~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l-- 206 (494)
.... ....+. .......++.++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++
T Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 81 DARI-DPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred cccc-cccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 1000 000010 00012346889999999999999999987 4589999999999999999999999999998876
Q ss_pred --HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC----CCceEEecCCcceEEEeCCC---C
Q 011080 207 --HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG----MIPLQMELGGKDACIILEDA---D 276 (494)
Q Consensus 207 --~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~----~~~~~le~gG~~~~iV~~da---D 276 (494)
.++|+|+|++|+|+|++.+.+..|++||+++.|+|||| .+|+.+.+.+. ++|+++|+|||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 48999999999999977678999999999999999999 99999988763 78999999999999999999 8
Q ss_pred HHHHHHHHHHHHhhccCCCccCccEEEEccc-hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHH
Q 011080 277 LDLAAANIVKGGFSYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355 (494)
Q Consensus 277 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~ 355 (494)
++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++ ||++++.+.+++.++++++++
T Consensus 240 l~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~---------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 240 GEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA---------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC---------CCCcChHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 999999999999998864 467777777888889999999
Q ss_pred c-CCEEeeccc--CCCceeecEEEeeCC---CCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccC--HH
Q 011080 356 K-AATFCQEYK--REGNLIWPLLLDNVR---PDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD--IN 427 (494)
Q Consensus 356 ~-Ga~v~~~~~--~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d--~~ 427 (494)
+ |++++.++. .+|+|++|||+...+ ++++++++|+||||++|++|+|.||+|+++|+++|||+++|||+| .+
T Consensus 311 ~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~ 390 (454)
T cd07129 311 APGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLA 390 (454)
T ss_pred cCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHH
Confidence 8 999964433 358999999998555 689999999999999999999999999999999999999999999 79
Q ss_pred HHHHHHhhc--ccceEEECCCCCCCC--CCCCccC-ccCCCCCCc--chHHHHHHhhcee
Q 011080 428 KAILISDAM--ETGTVQINSAPSRGP--DHFPFQG-LKDSGIGSQ--GITNSINMMTKIK 480 (494)
Q Consensus 428 ~~~~~~~~~--~~g~v~iN~~~~~~~--~~~pfgG-~~~SG~g~~--~g~~~l~~~~~~k 480 (494)
+++++++++ ++|+|+||+++.... ..+|||| +|.||+|++ +|.+++++||++-
T Consensus 391 ~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 391 LARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred HHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 999999999 699999998765432 2589999 999999999 7899999999863
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-79 Score=631.29 Aligned_cols=415 Identities=20% Similarity=0.227 Sum_probs=369.3
Q ss_pred HHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHh-cC
Q 011080 54 NKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRIL-GE 132 (494)
Q Consensus 54 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-~~ 132 (494)
++|+++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||. ++..|+..+++.+++++..+.... ..
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 777899999999999987765431 11
Q ss_pred ccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCC-
Q 011080 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF- 211 (494)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGl- 211 (494)
... ...+ .......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.++|+
T Consensus 81 ~~~---~~~~-~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~ 156 (442)
T cd07084 81 EPG---NHLG-QGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLL 156 (442)
T ss_pred ccc---ccCC-CCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCC
Confidence 000 0001 01124567899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCC-CHHHHHHHHHHHHh
Q 011080 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDA-DLDLAAANIVKGGF 289 (494)
Q Consensus 212 P~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~da-Dl~~aa~~i~~~~~ 289 (494)
|+|++++++|++. .+..|+.||+++.|+|||| .+++.+.+.+..+|+++|+|||||+||++|| |++.+++.+++++|
T Consensus 157 P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~ 235 (442)
T cd07084 157 PPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT 235 (442)
T ss_pred CccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh
Confidence 9999999999765 8999999999999999999 9999999988768999999999999999999 69999999999999
Q ss_pred hccCCCccCccEEEEccc-hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHc-CCEEe-eccc-
Q 011080 290 SYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQK-AATFC-QEYK- 365 (494)
Q Consensus 290 ~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~-~~~~- 365 (494)
.|+||.|++++|+|||++ ++++|+++|++.++++++| ++.+||++++ ++.++++++.++ |++++ +|..
T Consensus 236 ~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~ 307 (442)
T cd07084 236 ACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKEL 307 (442)
T ss_pred cccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCccc
Confidence 999999999999999999 9999999999999999988 6789999775 455667777777 48885 4422
Q ss_pred -------CCCceeecEEEeeCCCCC---CCcccccccceeeeEecCC--HHHHHHHHhcCCCCceEEEeccCHHHHHHHH
Q 011080 366 -------REGNLIWPLLLDNVRPDM---RIAWEEPFGPVLPVIRINS--VEEGIHHCNASNFGLQGCVFTRDINKAILIS 433 (494)
Q Consensus 366 -------~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~ 433 (494)
..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||+++|||+|.+.+.+++
T Consensus 308 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 387 (442)
T cd07084 308 KNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELI 387 (442)
T ss_pred ccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHH
Confidence 148999999999999997 9999999999999999999 9999999999999999999999999999999
Q ss_pred hhc-ccceEEECCC-CCCCCCCCCccC-ccCCCCCCcc-hHHHHHHhhceeEE
Q 011080 434 DAM-ETGTVQINSA-PSRGPDHFPFQG-LKDSGIGSQG-ITNSINMMTKIKST 482 (494)
Q Consensus 434 ~~~-~~g~v~iN~~-~~~~~~~~pfgG-~~~SG~g~~~-g~~~l~~~~~~k~i 482 (494)
+++ ++|+|+||.. +.......|||| .|.||+|++. |.+++++||+...+
T Consensus 388 ~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 388 GNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 999 9999999987 343334467766 8899999995 99999999987543
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-78 Score=627.40 Aligned_cols=423 Identities=38% Similarity=0.612 Sum_probs=394.4
Q ss_pred HHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCc
Q 011080 54 NKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133 (494)
Q Consensus 54 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~ 133 (494)
++++++|++|++.|+.++.++|.++|+++++.|.+++++|+++++.|+||+..+++.|+..+++.+++++...+.+.+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999988777765543
Q ss_pred cccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC
Q 011080 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK 213 (494)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~ 213 (494)
.. + ...+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|+
T Consensus 81 ~~------~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~ 153 (432)
T cd07078 81 IP------S-PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPP 153 (432)
T ss_pred cc------c-cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCc
Confidence 21 1 1124567888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhh
Q 011080 214 GLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFS 290 (494)
Q Consensus 214 g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~ 290 (494)
++++++++++.+.+..|..|++++.|.|||| .+++.+.+.+. ++|+++|+||+|++||++|+|++.|++.+++++|.
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~ 233 (432)
T cd07078 154 GVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG 233 (432)
T ss_pred CcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHh
Confidence 9999999976668899999999999999999 99999988774 69999999999999999999999999999999999
Q ss_pred ccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEee-cccC--
Q 011080 291 YSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-EYKR-- 366 (494)
Q Consensus 291 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~-~~~~-- 366 (494)
++||.|+++++||||++++++|+++|+++++++++|+| ++++++||++++.+.+++.++++++.++|+++.. +...
T Consensus 234 ~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~ 313 (432)
T cd07078 234 NAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEG 313 (432)
T ss_pred ccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC
Confidence 99999999999999999999999999999999999999 8899999999999999999999999999999954 4322
Q ss_pred -CCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECC
Q 011080 367 -EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS 445 (494)
Q Consensus 367 -~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~ 445 (494)
.|+|++|||+.+++++++++++|+||||++|++|+++||||+++|+.++||+++|||+|.+.++++++++++|+|+||+
T Consensus 314 ~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~ 393 (432)
T cd07078 314 GKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWIND 393 (432)
T ss_pred CCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 446 APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 446 ~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
.+....+..||||.|.||+|+++|++|+++|++.|+|+
T Consensus 394 ~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 394 YSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 88763456999999999999999999999999999885
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-77 Score=625.15 Aligned_cols=448 Identities=19% Similarity=0.222 Sum_probs=384.9
Q ss_pred CCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCC
Q 011080 25 SSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104 (494)
Q Consensus 25 ~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 104 (494)
+.++...+++||+|++.+++++.+ ++++++++|++|++.|+.+++.+|.++|++++++|.+++++|++++++|+||+
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~ 137 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQA 137 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCC
Confidence 345678999999999999999987 89999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHH-----HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHH
Q 011080 105 AKDAVT-----EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAP 179 (494)
Q Consensus 105 ~~~a~~-----ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ 179 (494)
+.++.. |++++++.++|+.+...++.+...+..+....... ....+..++|+||+++|+|||||+++.+.++++
T Consensus 138 ~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l-~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ 216 (549)
T cd07127 138 FMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPL-AMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFA 216 (549)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccc-cccceeEEecccEEEEEeCcCChHHHHHHHHHH
Confidence 988863 89999999999988877665443221111000000 111234779999999999999999999999999
Q ss_pred HhhcCCEEEEcCCCCChHHHH----HHHHHHHHcCCCCCcEEEecCC-chhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 180 ALIAGNSIVLKPPTQGAVAAL----HMVHCFHLAGFPKGLISCVTGK-GSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 180 aL~aGN~vvlkps~~~~~t~~----~l~~~l~~aGlP~g~i~~v~g~-~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
||++||+||+|||+.+|+++. .+.++|.++|+|+|+||+++++ +.++++.|+.||+++.|.|||| .+|+.|.+.
T Consensus 217 ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~ 296 (549)
T cd07127 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEAN 296 (549)
T ss_pred HHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999998764 4668999999999999999985 4678999999999999999999 999999999
Q ss_pred cCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccc---------hHHHHHHHHHHHHhccc
Q 011080 254 AGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES---------VADTLVEKVKAKVAKLT 324 (494)
Q Consensus 254 a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------~~~~f~~~l~~~~~~~~ 324 (494)
++.+|+++|+||||++||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++
T Consensus 297 a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l- 375 (549)
T cd07127 297 ARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL- 375 (549)
T ss_pred hccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-
Confidence 988999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccC-----CC-ceeecEEEeeCCCCCCCcccccccceeee
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR-----EG-NLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~-----~g-~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
+||| +..+.+||++++.+++++.+ +++.|+.++++... +| ++++|||+...+++|++++||+||||++|
T Consensus 376 ~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (549)
T cd07127 376 LADPARAAALLGAIQSPDTLARIAE----ARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFV 451 (549)
T ss_pred cCCccccccccCCcCCHHHHHHHHH----HHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEE
Confidence 9999 77899999999999988854 55677755655321 35 46699999988899999999999999999
Q ss_pred EecCCHHHHHHHHhcCC--C-CceEEEeccCHHHHHHHHhhc-ccc-eEEECCCCC-CCCCCCCccCccCCCCCCcch-H
Q 011080 398 IRINSVEEGIHHCNASN--F-GLQGCVFTRDINKAILISDAM-ETG-TVQINSAPS-RGPDHFPFQGLKDSGIGSQGI-T 470 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~--~-gl~a~v~s~d~~~~~~~~~~~-~~g-~v~iN~~~~-~~~~~~pfgG~~~SG~g~~~g-~ 470 (494)
++|+|.||+|+++|++. + ||+++|||+|.+.++++.+++ ++| +++||.... ...--+||||++.||.....| .
T Consensus 452 ~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~ 531 (549)
T cd07127 452 VATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAA 531 (549)
T ss_pred EEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccc
Confidence 99999999999999974 4 699999999999999999984 555 999995433 222225699999999986543 5
Q ss_pred HHHHHhhceeE
Q 011080 471 NSINMMTKIKS 481 (494)
Q Consensus 471 ~~l~~~~~~k~ 481 (494)
.....|...+-
T Consensus 532 ~~~~~fv~~r~ 542 (549)
T cd07127 532 LTDGAFVANRF 542 (549)
T ss_pred cchhhhhhcce
Confidence 55666766553
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-78 Score=616.75 Aligned_cols=398 Identities=22% Similarity=0.274 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHH
Q 011080 50 QEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRI 129 (494)
Q Consensus 50 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~ 129 (494)
-+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|||..++..+ .++++.+...
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~------~~~~~~~~~~-- 74 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKIA------KNHLAAEKTP-- 74 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH------HHHHHHHhcC--
Confidence 37899999999999999999999999999999999999999999999999999999887533 3444433211
Q ss_pred hcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH---
Q 011080 130 LGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF--- 206 (494)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l--- 206 (494)
+... +...... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++
T Consensus 75 -~~~~-~~~~~~~--~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~ 150 (429)
T cd07121 75 -GTED-LTTTAWS--GDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150 (429)
T ss_pred -cccc-ccccccc--CCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence 1100 0000001 11234578899999999999999999999999999999999999999999999999999877
Q ss_pred -HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHH
Q 011080 207 -HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANI 284 (494)
Q Consensus 207 -~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i 284 (494)
.++|+|+|++|++++++.+.+..|+.||+|++|+|||| .+|+.+++. .+|+++|+|||||+||++|||++.|++.+
T Consensus 151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~--~k~~~lelGGk~p~iV~~dADld~Aa~~i 228 (429)
T cd07121 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS--GKKAIGAGAGNPPVVVDETADIEKAARDI 228 (429)
T ss_pred HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC--CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence 48999999999999877778999999999999999999 999999886 49999999999999999999999999999
Q ss_pred HHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHc--CCEEee
Q 011080 285 VKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQK--AATFCQ 362 (494)
Q Consensus 285 ~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~v~~ 362 (494)
++++|+|+||.|++++|||||+++||+|+++|++. .. +++++.+.+++.++++++.+. |+++..
T Consensus 229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~~-------------~~i~~~~~~~v~~~i~~a~~~~~ga~~~~ 294 (429)
T cd07121 229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-GA-------------YVLNDEQAEQLLEVVLLTNKGATPNKKWV 294 (429)
T ss_pred HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-CC-------------EEcCHHHHHHHHHhhcccCCCcccccccc
Confidence 99999999999999999999999999999999886 21 468899999999999999864 688753
Q ss_pred ccc------CCCceee---cEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc--eEEEeccCHHHHHH
Q 011080 363 EYK------REGNLIW---PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL--QGCVFTRDINKAIL 431 (494)
Q Consensus 363 ~~~------~~g~~~~---Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~s~d~~~~~~ 431 (494)
++. ..|+|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+.+++
T Consensus 295 gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~ 374 (429)
T cd07121 295 GKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTK 374 (429)
T ss_pred CcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHH
Confidence 322 1478877 499999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHhhcccceEEECCCCCCCCCCCCccCccCCCC--CCcchHHHHHHhhceeEE
Q 011080 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGI--GSQGITNSINMMTKIKST 482 (494)
Q Consensus 432 ~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~--g~~~g~~~l~~~~~~k~i 482 (494)
+++++++|+|+||+++. .++||||+|.|++ |..-| +|+ +..|++
T Consensus 375 ~a~~l~aG~v~iN~~~~---~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~ 420 (429)
T cd07121 375 MARAMQTTIFVKNGPSY---AGLGVGGEGYTTFTIAGPTG-EGL---TSARTF 420 (429)
T ss_pred HHhhCCceEEEEcCCCc---CccccCCCccceEEecCCcC-cCc---cChhhh
Confidence 99999999999997654 4489999999998 55444 443 444443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-77 Score=611.18 Aligned_cols=405 Identities=19% Similarity=0.230 Sum_probs=346.2
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHH--HHHHHHHhHHHh
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDL--VSYCAEEGVRIL 130 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~--l~~~~~~~~~~~ 130 (494)
+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.+++.++...... .+++.. ...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~---~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKD---EKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---ccc
Confidence 478999999999999999999999999999999999999999999999999999998766544332 122211 111
Q ss_pred cCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHH---
Q 011080 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH--- 207 (494)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~--- 207 (494)
+. ..+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.
T Consensus 78 ~~-------~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l 149 (439)
T cd07081 78 CG-------VLTG-DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAA 149 (439)
T ss_pred Cc-------eecC-CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHH
Confidence 11 1111 113446889999999999999999999999999999999999999999999999988888775
Q ss_pred -HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHH
Q 011080 208 -LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIV 285 (494)
Q Consensus 208 -~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~ 285 (494)
++|+|+|++|++++.+.+.++.|+.||+|++|+|||| ...+..++ ..+|+++|+|||+|+||++|||++.|++.++
T Consensus 150 ~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~--~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv 227 (439)
T cd07081 150 VAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS--SGKPAIGVGAGNTPVVIDETADIKRAVQSIV 227 (439)
T ss_pred HHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh--cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHH
Confidence 7899999999999877788999999999999999999 74433222 4789999999999999999999999999999
Q ss_pred HHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc
Q 011080 286 KGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK 365 (494)
Q Consensus 286 ~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~ 365 (494)
+++|+|+||.|++.+|+|||+++||+|+++|++++ ||+++..+.+++.++|+++.++|+++.++..
T Consensus 228 ~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~ 293 (439)
T cd07081 228 KSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDA 293 (439)
T ss_pred HHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCH
Confidence 99999999999999999999999999999998753 7999999999999999999999998876532
Q ss_pred -----CCCceeecE---EEeeCC--CCCCCcccccccceeeeEecCCHHHHHHHHhcC----CCCceEEEeccC---HHH
Q 011080 366 -----REGNLIWPL---LLDNVR--PDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS----NFGLQGCVFTRD---INK 428 (494)
Q Consensus 366 -----~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~s~d---~~~ 428 (494)
..|+|+.|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++
T Consensus 294 ~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~ 373 (439)
T cd07081 294 YKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIEN 373 (439)
T ss_pred HHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHH
Confidence 258899998 998888 999999999999999999999999999999965 899999999999 999
Q ss_pred HHHHHhhcccceEEECCCCCCCCC--CCCccCccCC--CCCCcchHH-----HHHHhhceeEEEE
Q 011080 429 AILISDAMETGTVQINSAPSRGPD--HFPFQGLKDS--GIGSQGITN-----SINMMTKIKSTVI 484 (494)
Q Consensus 429 ~~~~~~~~~~g~v~iN~~~~~~~~--~~pfgG~~~S--G~g~~~g~~-----~l~~~~~~k~i~~ 484 (494)
++++++++++|+|+||.++..+.. ..-|||++.+ |.|.++|.. +...|++.|+|..
T Consensus 374 a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 374 MNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999999987632222 2467677765 555544432 5778888887753
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-76 Score=609.53 Aligned_cols=406 Identities=21% Similarity=0.262 Sum_probs=348.4
Q ss_pred CCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHh
Q 011080 47 ACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEG 126 (494)
Q Consensus 47 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~ 126 (494)
....+|+++++++|++|+..|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.+ .++++++..
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~~------~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKIA------KNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHH------HHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999988743 233333322
Q ss_pred HHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH
Q 011080 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206 (494)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l 206 (494)
.... ........ ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 106 ~~~~----~~~~~~~~--~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll 179 (465)
T PRK15398 106 PGVE----DLTTEALT--GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELL 179 (465)
T ss_pred cccc----ccccCccc--CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHH
Confidence 1100 00000011 11234578889999999999999999999999999999999999999999999999999987
Q ss_pred H----HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHH
Q 011080 207 H----LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAA 281 (494)
Q Consensus 207 ~----~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa 281 (494)
. ++|+|+|+++++++.+.+.++.|++||+||+|+|||| .+|+.+++ ..+|+++|+|||||+||++|||++.|+
T Consensus 180 ~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~--~~k~~~~elGGk~p~IV~~dADld~Aa 257 (465)
T PRK15398 180 NEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK--SGKKAIGAGAGNPPVVVDETADIEKAA 257 (465)
T ss_pred HHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH--cCCceeeecCCCceEEEecCCCHHHHH
Confidence 6 6999999999999876778999999999999999999 99999998 469999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe
Q 011080 282 ANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361 (494)
Q Consensus 282 ~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~ 361 (494)
+.+++++|.|+||.|++++|||||+++||+|+++|+++. .|++++.+.+++.++++++.++++++.
T Consensus 258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~~~~~~~ 323 (465)
T PRK15398 258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGGTVNKKW 323 (465)
T ss_pred HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhcccccchhh
Confidence 999999999999999999999999999999999999761 278999999999999986544455553
Q ss_pred -eccc-----CCCcee---ecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc--eEEEeccCHHHHH
Q 011080 362 -QEYK-----REGNLI---WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL--QGCVFTRDINKAI 430 (494)
Q Consensus 362 -~~~~-----~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~s~d~~~~~ 430 (494)
++.. ..|+++ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++
T Consensus 324 ~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~ 403 (465)
T PRK15398 324 VGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLN 403 (465)
T ss_pred hCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHH
Confidence 3221 236665 4799999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 431 LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 431 ~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
++++++++|+|+||.++. .++||||.|.|.+. .+|+.| ...|..|+++.+
T Consensus 404 ~~a~~l~~G~V~iN~~~~---~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 404 KMARAIQTSIFVKNGPSY---AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHhCCceEEEECCCCc---cccCcCCCCCceee-ecccCC-CCccchhhhhhh
Confidence 999999999999997643 35899999999852 236666 777777776554
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=555.85 Aligned_cols=423 Identities=26% Similarity=0.391 Sum_probs=382.6
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhc
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILG 131 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 131 (494)
+++.++++|.+|.+-+..|.+-|.+.|.++.+.++++.++|.+++..+.+|+..++. .|+......++++......|..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 456689999999999999999999999999999999999999999999999999985 7999999999999999888887
Q ss_pred CccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCC
Q 011080 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211 (494)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGl 211 (494)
...... ++. ......+++.+|.|||++|+|||||+.+.+.++++||++||+||+|||+.+|.++..|++++-+. |
T Consensus 84 ~~~v~~--~~~--t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-l 158 (477)
T KOG2456|consen 84 PEPVKK--SFL--TFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-L 158 (477)
T ss_pred ccccCc--ccc--cccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-c
Confidence 754321 111 12356788999999999999999999999999999999999999999999999999999999987 9
Q ss_pred CCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHH
Q 011080 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGG 288 (494)
Q Consensus 212 P~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~ 288 (494)
+.+.+.+|.|.-+ ....|..| +.|.|+|||| .+|+.+..++ +++||+||+|||+|++|++|+|++.+++.|+|++
T Consensus 159 d~~~~~VV~Ggv~-ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk 236 (477)
T KOG2456|consen 159 DQDLIRVVNGGVP-ETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGK 236 (477)
T ss_pred CcceEEEecCCCc-hHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHh
Confidence 9999999999544 44556665 8899999999 9999988876 6899999999999999999999999999999999
Q ss_pred hhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-cCC
Q 011080 289 FSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-KRE 367 (494)
Q Consensus 289 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~~~ 367 (494)
+.|+||.|.+++.|+++.++++.|+++++..++++.-.+|.+..+++.+++..+++|+..++++- |..+.||. +..
T Consensus 237 ~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~ 313 (477)
T KOG2456|consen 237 WMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDES 313 (477)
T ss_pred hccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchh
Confidence 99999999999999999999999999999999998656778899999999999999999988743 43445553 345
Q ss_pred CceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCC
Q 011080 368 GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 447 (494)
Q Consensus 368 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~ 447 (494)
..|+.|||+.+++++.++|+||+||||++|+.+++++|+|+.+|..+..|++++||+|.....++.+++.+|.|.+|+.-
T Consensus 314 d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i 393 (477)
T KOG2456|consen 314 DRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVI 393 (477)
T ss_pred hcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceE
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 448 SR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 448 ~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
.+ ....+||||++.||+|++||.+|++.|++.|++..+
T Consensus 394 ~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 394 MHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred EEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 53 334589999999999999999999999999998754
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-75 Score=595.47 Aligned_cols=389 Identities=20% Similarity=0.217 Sum_probs=337.0
Q ss_pred HHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh----HHHH--------HHHHHHHHH
Q 011080 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA----KDAV--------TEVVRSGDL 118 (494)
Q Consensus 51 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~~ 118 (494)
+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999998887775 3443 578888888
Q ss_pred HHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHH
Q 011080 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198 (494)
Q Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t 198 (494)
+++++.+... .+...+ .. ....+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.+
T Consensus 84 ~~~~a~~~~~-~g~~~~--~~---~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t 155 (417)
T PRK00197 84 LRQVAALPDP-VGEVLD--GW---TLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHS 155 (417)
T ss_pred HHHHhhcCCC-cccccc--ce---ecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHH
Confidence 8888765442 222110 00 0011335788999999999999886 4 6788999999999999999999999999
Q ss_pred HHHHHHHH----HHcCCCCCcEEEecCCc-hhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEe
Q 011080 199 ALHMVHCF----HLAGFPKGLISCVTGKG-SEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIIL 272 (494)
Q Consensus 199 ~~~l~~~l----~~aGlP~g~i~~v~g~~-~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~ 272 (494)
+.++++++ .++|+|+|++|++++.+ .+.+..|..||+++.|+|||| .+|+.+++.+ .+|+++|+|||||+||+
T Consensus 156 ~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a-~~~~~lELGGk~p~IV~ 234 (417)
T PRK00197 156 NRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA-TVPVIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc-CCCEEeecCCcceEEEe
Confidence 99998875 69999999999999644 457888999999999999999 9999999876 69999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHH
Q 011080 273 EDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMD 352 (494)
Q Consensus 273 ~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~ 352 (494)
+|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++..
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~------------------------ 289 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVELR------------------------ 289 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeEe------------------------
Confidence 999999999999999999999 9999999999999999999999999998754211
Q ss_pred HHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHH
Q 011080 353 AKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432 (494)
Q Consensus 353 a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~ 432 (494)
++....+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 290 ---------~~~~~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~ 355 (417)
T PRK00197 290 ---------GDEAALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERF 355 (417)
T ss_pred ---------cCHHHHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHH
Confidence 1100011 22 9998 46799999999999999999999999999999999999999999999999999
Q ss_pred HhhcccceEEECCCCCCCCCCCCccCccCCCCC----CcchHHHHHHhhceeEEEEecCC
Q 011080 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG----SQGITNSINMMTKIKSTVINLPT 488 (494)
Q Consensus 433 ~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~i~~~~~~ 488 (494)
++++++|+|+||++....+ ..||||.|.||+| +++|.+|+++|++.|+++++.++
T Consensus 356 ~~~l~~G~v~VN~~~~~~~-~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~~ 414 (417)
T PRK00197 356 LNEVDSAAVYVNASTRFTD-GGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDGQ 414 (417)
T ss_pred HHhCCeeEEEEeCCCccCC-CCccccchhheeecCCCcCCCccchHhhcEEEEEEECCCe
Confidence 9999999999998776544 4899999999999 99999999999999999886653
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-75 Score=591.63 Aligned_cols=381 Identities=19% Similarity=0.218 Sum_probs=330.8
Q ss_pred HHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChH----HHH--------HHHHHHHHHHHHH
Q 011080 55 KVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK----DAV--------TEVVRSGDLVSYC 122 (494)
Q Consensus 55 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~~l~~~ 122 (494)
..+++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+.. ++. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999777766643 333 5888888888888
Q ss_pred HHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHH
Q 011080 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202 (494)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l 202 (494)
+...+. .+.. ... . ....+...+++++|+|||++|+|| +| .+.++++++||++||+||+|||+.+|.++..+
T Consensus 82 a~~~~~-~g~~--~~~--~-~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l 153 (406)
T cd07079 82 AALPDP-VGEV--LRG--W-TLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRAL 153 (406)
T ss_pred HhcCCC-Cccc--ccc--e-eccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHH
Confidence 754331 2211 000 0 001123467889999999999996 55 77889999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCcEEEecCCch-hhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCC
Q 011080 203 VHCFH----LAGFPKGLISCVTGKGS-EIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDAD 276 (494)
Q Consensus 203 ~~~l~----~aGlP~g~i~~v~g~~~-~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daD 276 (494)
++++. ++|+|+|++|++++++. +.++.|.+||++|+|+|||| .+|+.+++.+ .+|+++|+|||||+||++|||
T Consensus 154 ~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a-~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 154 VEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA-TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc-CCCEEeecCCcceEEEeCCCC
Confidence 99886 89999999999998544 67888999999999999999 9999999877 799999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHc
Q 011080 277 LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQK 356 (494)
Q Consensus 277 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 356 (494)
++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++.
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------- 278 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------- 278 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC---------------------------------
Confidence 99999999999999999 99999999999999999999999877752
Q ss_pred CCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc
Q 011080 357 AATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM 436 (494)
Q Consensus 357 Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~ 436 (494)
|+++.++... ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++
T Consensus 279 ga~~~~g~~~-~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~ 353 (406)
T cd07079 279 GVELRGDEET-LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV 353 (406)
T ss_pred CCEEecCHHH-HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC
Confidence 4455433221 1377888 7789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEECCCCCCCCCCCCccCccCCCC----CCcchHHHHHHhhceeEEEE
Q 011080 437 ETGTVQINSAPSRGPDHFPFQGLKDSGI----GSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 437 ~~g~v~iN~~~~~~~~~~pfgG~~~SG~----g~~~g~~~l~~~~~~k~i~~ 484 (494)
++|+|+||+++...+ ..||||.|+||+ |+++|.+++++|++.|+|+.
T Consensus 354 ~~G~v~iN~~~~~~~-~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 354 DSAAVYVNASTRFTD-GGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred CeeEEEEeCCCcccC-CCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 999999998776554 479999999998 89999999999999999864
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-73 Score=587.42 Aligned_cols=413 Identities=17% Similarity=0.187 Sum_probs=354.0
Q ss_pred CCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHHHHH
Q 011080 47 ACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE-VVRSGDLVSYCAEE 125 (494)
Q Consensus 47 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~ 125 (494)
..+.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.+ .......+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 46789999999999999999999999999999999999999999999999999999999887642 22344444444332
Q ss_pred hHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHH--
Q 011080 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV-- 203 (494)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~-- 203 (494)
. +..+. . .. ..+...+..++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++..++
T Consensus 84 ~-~~~G~--~------~~-~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~ 153 (488)
T TIGR02518 84 M-KTIGI--L------SE-DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKL 153 (488)
T ss_pred C-cccce--e------cC-CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHH
Confidence 1 11111 0 11 12345678899999999999999999999999999999999999999999999999854
Q ss_pred --HHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHH
Q 011080 204 --HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLA 280 (494)
Q Consensus 204 --~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~a 280 (494)
++|.++|+|+|++|++++.+.+.+..|++||+|++|+|||| ..++.+. ...+|+++|+|||+|+||++|||++.|
T Consensus 154 l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a~--~~~~pv~~e~gGn~p~iV~~dADld~A 231 (488)
T TIGR02518 154 MRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAAY--SSGTPAIGVGPGNGPAYIERTANVKKA 231 (488)
T ss_pred HHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH--HcCCCEEEEcCCCCeEEEeCCCCHHHH
Confidence 55589999999999999877889999999999999999999 7766553 246999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHH-------HhccccCCC--CCCCCCCccCCHHHHHHHHHHHH
Q 011080 281 AANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAK-------VAKLTVGAP--EDDCDITPVVTESSANFIEGLVM 351 (494)
Q Consensus 281 a~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~-------~~~~~~g~p--~~~~~~gpl~~~~~~~~~~~~i~ 351 (494)
++.+++|+|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| ++++++||+++..+++++.++++
T Consensus 232 a~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~ 311 (488)
T TIGR02518 232 VRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAG 311 (488)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhc
Confidence 999999999999999999999999999999999999998 888999996 46889999999999999999999
Q ss_pred HHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhc----CCCCceEEEeccCHH
Q 011080 352 DAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA----SNFGLQGCVFTRDIN 427 (494)
Q Consensus 352 ~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~s~d~~ 427 (494)
.++.+|++++.++.. .+++++++ .+|+||||++|++|+|+||||+++|+ ++|||+++|||+|.+
T Consensus 312 ~av~~gakll~gg~~-----------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~ 379 (488)
T TIGR02518 312 LTVPEDAKVLIGEQN-----------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKD 379 (488)
T ss_pred cccCCCCEEEEeCCC-----------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHH
Confidence 999999999654321 35677886 79999999999999999999999887 699999999999999
Q ss_pred HHHHHHhhcccceEEECCCCCC-----CCCCCC-----ccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 428 KAILISDAMETGTVQINSAPSR-----GPDHFP-----FQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 428 ~~~~~~~~~~~g~v~iN~~~~~-----~~~~~p-----fgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
.+++|++++++|+|+||++.+. +....| ||+++.++.+ + +.+++.+++.|+|....
T Consensus 380 ~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~-~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 380 IVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D-NITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC--C-CCCHHHhheeeEEEecc
Confidence 9999999999999999976532 112233 5555444443 3 88999999999987655
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=584.40 Aligned_cols=406 Identities=20% Similarity=0.248 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH-HHHHHHH-HHHHHHHHhHHHh
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGD-LVSYCAEEGVRIL 130 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~~~~~~~~~ 130 (494)
++.++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++. |+..+++ .++++... +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7776666 66666541 111
Q ss_pred cCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHH---
Q 011080 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH--- 207 (494)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~--- 207 (494)
+.. .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 g~~--------~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l 149 (436)
T cd07122 79 GVI--------EE-DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149 (436)
T ss_pred eee--------cc-CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHH
Confidence 110 01 113456788999999999999999999999999999999999999999999999999888764
Q ss_pred -HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHH
Q 011080 208 -LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIV 285 (494)
Q Consensus 208 -~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~ 285 (494)
++|+|+|++|+++|.+.+.++.|++||+|+.|+|||| .+++..+ ...+|+++|+|||||+||++|||++.|++.++
T Consensus 150 ~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~--~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~ 227 (436)
T cd07122 150 VAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY--SSGKPAIGVGPGNVPAYIDETADIKRAVKDII 227 (436)
T ss_pred HHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH--hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHH
Confidence 8999999999999977788999999999999999999 7665432 24799999999999999999999999999999
Q ss_pred HHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcc-------ccCCC--CCCCCCCccCCHHHHHHHHHHHHHHHHc
Q 011080 286 KGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL-------TVGAP--EDDCDITPVVTESSANFIEGLVMDAKQK 356 (494)
Q Consensus 286 ~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~-------~~g~p--~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 356 (494)
+|+|+|+||.|++++|||||+++||+|+++|+++.+.+ ++|++ ++++.+||+++..+.+++.+++..+...
T Consensus 228 ~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ 307 (436)
T cd07122 228 LSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPE 307 (436)
T ss_pred HHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999887 88988 4577899999999988888777766666
Q ss_pred CCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC----CCCceEEEeccCHHHHHHH
Q 011080 357 AATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS----NFGLQGCVFTRDINKAILI 432 (494)
Q Consensus 357 Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~s~d~~~~~~~ 432 (494)
|+++.. ..+.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||+++|||+|.++++++
T Consensus 308 ga~vl~-----------~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~ 375 (436)
T cd07122 308 DTKVLV-----------AEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEF 375 (436)
T ss_pred CCeEEE-----------EecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHH
Confidence 766532 2256788899987 56799999999999999999999997 8999999999999999999
Q ss_pred HhhcccceEEECCCCCCCCCCCCccCccCC---CCCCc-----chHHHHHHhhceeEEE
Q 011080 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDS---GIGSQ-----GITNSINMMTKIKSTV 483 (494)
Q Consensus 433 ~~~~~~g~v~iN~~~~~~~~~~pfgG~~~S---G~g~~-----~g~~~l~~~~~~k~i~ 483 (494)
++++++|+|+||+++..+..+.-+.|..-| |.|+. .+.-..+.|++.++|.
T Consensus 376 ~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (436)
T cd07122 376 ALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVA 434 (436)
T ss_pred HhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeec
Confidence 999999999999887644333444433322 22222 2234567788888764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-72 Score=608.04 Aligned_cols=383 Identities=19% Similarity=0.210 Sum_probs=337.5
Q ss_pred HHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHHhC--CChHHH----HHHHHHHHHH
Q 011080 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECL------VKEIA--KPAKDA----VTEVVRSGDL 118 (494)
Q Consensus 51 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a----~~ev~~~~~~ 118 (494)
+.+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888877 4699999999
Q ss_pred HHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHH
Q 011080 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198 (494)
Q Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t 198 (494)
+++++.. .+..+...+ +. .. ..+...++.++|+|||++|+||| |+.+. +++++||++||+||+|||+.+|.+
T Consensus 374 ~~~~a~~-~~~~g~~~~---~~-~~-~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s 445 (718)
T PLN02418 374 IRQLADM-EDPIGRVLK---RT-EV-ADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARS 445 (718)
T ss_pred HHHHhcC-ccccCcccc---cc-cc-CCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHH
Confidence 9999876 333332110 00 00 11334678899999999999999 99999 899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCc----EEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeC
Q 011080 199 ALHMVHCFHLAGFPKGL----ISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILE 273 (494)
Q Consensus 199 ~~~l~~~l~~aGlP~g~----i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~ 273 (494)
+..|++++.++ +|+|+ +|+++| +.+++..|..||+|++|+|||| ..+..++.. .++|+++|+|||||+||++
T Consensus 446 ~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~-~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 446 NAILHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVSQIKAS-TKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence 99999999999 99996 999998 5678999999999999999999 776666554 4799999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHH
Q 011080 274 DADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDA 353 (494)
Q Consensus 274 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a 353 (494)
|||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+..+|++|
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G------------------~~~~~i~~a 569 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G------------------GLNDLLVAL 569 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c------------------cHHHHHHHH
Confidence 999999999999999999 9999999999999999997 1 247899999
Q ss_pred HHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHH
Q 011080 354 KQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433 (494)
Q Consensus 354 ~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~ 433 (494)
+++|+++++|....| ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++.+++
T Consensus 570 ~~~Ga~l~Gg~~~~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a 641 (718)
T PLN02418 570 RSAGVTLYGGPRASK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFL 641 (718)
T ss_pred HHCCCEEECCccccC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHH
Confidence 999999965433223 233 3 78999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEECCCCCCCCCCCCccCccCCCC--CCcc--hHHHHHHhhceeEEEEec
Q 011080 434 DAMETGTVQINSAPSRGPDHFPFQGLKDSGI--GSQG--ITNSINMMTKIKSTVINL 486 (494)
Q Consensus 434 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~--g~~~--g~~~l~~~~~~k~i~~~~ 486 (494)
+++++|.|+||.++... ...||||+|+||+ |+++ |++|+++|++.|+|++-.
T Consensus 642 ~~l~aG~V~IN~~~~~~-~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 642 RQVDSAAVFHNASTRFS-DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred HhCCeeEEEEeCCCCCC-CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 99999999999876544 4479999999999 9885 999999999999998754
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-72 Score=546.65 Aligned_cols=444 Identities=29% Similarity=0.460 Sum_probs=403.0
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCC-CceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTR-KPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIA 94 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg-~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 94 (494)
-.++|+-+. .|...+++||++. ++++++..++++++++|++.|.+++..|..+|..+|+.+|++++++|+.+..+|.
T Consensus 116 p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~ 193 (769)
T COG4230 116 PIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLM 193 (769)
T ss_pred cccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666543 4678999999984 5779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH
Q 011080 95 ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV 174 (494)
Q Consensus 95 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 174 (494)
.++++|.||+...+..|+.++.++|+||+..+++-.++ ..++|+|+|++|+|||||+.+..
T Consensus 194 ~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~-------------------~~~~~~G~vVcISPWNFPLAIFt 254 (769)
T COG4230 194 GLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN-------------------LTHRPLGPVVCISPWNFPLAIFT 254 (769)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc-------------------cccCCCCcEEEECCCCchHHHHH
Confidence 99999999999999999999999999999887653322 23569999999999999999999
Q ss_pred hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 175 SKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 175 ~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
.+++.||++||+|+-||.+.+|+.+..-+++|+++|+|++++|+++|+|..++..|..+++++.|+|||| .+++.|.+.
T Consensus 255 GqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~ 334 (769)
T COG4230 255 GQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQ 334 (769)
T ss_pred hHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 988877665
Q ss_pred c-----CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 254 A-----GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 254 a-----~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
. ...|++.|+||-|++||+.+|--+.++..++.|+|..+||+|.+.+.+++++++.|..++.|+-.+..+++|+|
T Consensus 335 LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p 414 (769)
T COG4230 335 LAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNP 414 (769)
T ss_pred HhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCc
Confidence 3 26899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeec---cc-CCCceeecEEEeeCCCCCCCcccccccceeeeEecC--
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQE---YK-REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN-- 401 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~---~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~-- 401 (494)
.-.+++||+|+..+.+.++++|+..+..|-.+..- .. .+|.|+.||+++-- +..-++.|+||||+-|++|+
T Consensus 415 ~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~ 492 (769)
T COG4230 415 DRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRD 492 (769)
T ss_pred cceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHH
Confidence 56999999999999999999999999888666421 22 47999999999632 23346889999999999998
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCC-CCCCccCccCCCCCC-cchHHHHHHhhce
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP-DHFPFQGLKDSGIGS-QGITNSINMMTKI 479 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~-~~~pfgG~~~SG~g~-~~g~~~l~~~~~~ 479 (494)
++++.|+-+|.++|||+.+|+|+-.+.+.++.+++.+|++|||.-..... ...||||.+-||.|- -||+..|..|+..
T Consensus 493 ~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~ 572 (769)
T COG4230 493 ELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSE 572 (769)
T ss_pred HHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhc
Confidence 68999999999999999999999999999999999999999998765432 347999999999996 4899999999987
Q ss_pred eEE
Q 011080 480 KST 482 (494)
Q Consensus 480 k~i 482 (494)
+..
T Consensus 573 ~p~ 575 (769)
T COG4230 573 RPW 575 (769)
T ss_pred CCc
Confidence 764
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-72 Score=536.77 Aligned_cols=447 Identities=30% Similarity=0.447 Sum_probs=408.8
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+||+|+++.+++++++..+||.|+.+|+++++++..|+++|+++|+.||+ .|++++..+|.+.|.+++++++++++
T Consensus 422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e 501 (881)
T KOG2452|consen 422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE 501 (881)
T ss_pred HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence 4579999999999999999999999999999999999999999999999997 49999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
+|+.+.+.+.|.-+.-|. ..+...++.+||++.+.+++.+...+.... . .....+.+.++|+||+++|+|||||+
T Consensus 502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~a-r---pn~nl~lt~~epigv~g~i~pwnypl 577 (881)
T KOG2452|consen 502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQA-R---PNRNLTLTRKEPVGVCGIIIPWNYPL 577 (881)
T ss_pred hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccC-C---CCCcceeeecCcceeEEEeccCCchH
Confidence 999999999998877774 466778889999999999988877654221 1 12467889999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
..+.|+.+.+|++- ...+++ - .|++|+++|.++-+++.|..||+++.|-|||| ..|..
T Consensus 578 mmlswk~aaclaa~--------------~~k~~e---~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~ 636 (881)
T KOG2452|consen 578 MMLSWKTAACLAAQ--------------VLKFAE---L----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 636 (881)
T ss_pred HHHHHHHHHHHHHH--------------Hhhhhh---h----cceEEEecCCcchhccccccCCccceeccccchHHHHH
Confidence 99999999998742 112222 2 58899999999999999999999999999999 99999
Q ss_pred HHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 250 ISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 250 v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
+.+.+ ..|++.+|+||++|+|+..|||++.|++.-..+.|++-|..|++.-|+||.+++.|+|+.++.+..+++++|
T Consensus 637 im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig 716 (881)
T KOG2452|consen 637 IMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVG 716 (881)
T ss_pred HHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccC
Confidence 99876 479999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eecc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
+| |.+++-||.-...++.++..|++.++..||++ +||. .++|.|++|||+.+++.+|-+..||-||||+.|.+|+|
T Consensus 717 ~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d 796 (881)
T KOG2452|consen 717 NPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD 796 (881)
T ss_pred CcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence 99 88999999999999999999999999999999 5553 36899999999999999999999999999999999985
Q ss_pred --HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 403 --VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 403 --~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+.++.+|.+++||+++|||+|...+.++++.+.+|+|+||...-.... .||||+|+||+|...|..+|++|...|
T Consensus 797 ~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdva-apfggfkqsgfgkd~ge~alneyl~~k 875 (881)
T KOG2452|consen 797 GDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVA-APFGGFKQSGFGKDLGEAALNEYLRVK 875 (881)
T ss_pred CCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccc-cCCCCccccccccchhHHHHhhheeeE
Confidence 79999999999999999999999999999999999999999998765544 899999999999999999999999999
Q ss_pred EEEEec
Q 011080 481 STVINL 486 (494)
Q Consensus 481 ~i~~~~ 486 (494)
+|++++
T Consensus 876 tit~ey 881 (881)
T KOG2452|consen 876 TVTFEY 881 (881)
T ss_pred EEEeeC
Confidence 999875
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-71 Score=610.41 Aligned_cols=414 Identities=17% Similarity=0.217 Sum_probs=357.4
Q ss_pred EEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHH
Q 011080 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYC 122 (494)
Q Consensus 44 ~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 122 (494)
++...+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. +...+...+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999875 332232333222
Q ss_pred HHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHH
Q 011080 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202 (494)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l 202 (494)
.. ..+..+. .+. ......+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+
T Consensus 85 ~~-~~~~~g~--------~~~-~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~ 154 (862)
T PRK13805 85 YK-DEKTVGV--------IEE-DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAA 154 (862)
T ss_pred hc-CCCcccc--------cCc-CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHH
Confidence 11 1111111 111 1134567889999999999999999999999999999999999999999999999998
Q ss_pred HHHHH----HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCH
Q 011080 203 VHCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADL 277 (494)
Q Consensus 203 ~~~l~----~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl 277 (494)
++++. ++|+|+|++|++++++.+.+..|++||++|+|+|||| ..++..+ ..++|+++|+|||||+||++|||+
T Consensus 155 ~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~--~~~~pv~~e~gGk~p~iV~~dADl 232 (862)
T PRK13805 155 AKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAAY--SSGKPALGVGAGNVPAYIDKTADI 232 (862)
T ss_pred HHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHHH--hcCCCeEEECCCCCeEEEeCCCCH
Confidence 88864 7899999999999877788999999999999999999 7654332 257999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Q 011080 278 DLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKA 357 (494)
Q Consensus 278 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~G 357 (494)
+.|++.|++|+|+|+||.|+++++||||++++|+|+++|+++. +|++++.+.+++++++++++..|
T Consensus 233 ~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~~~i~~a~~~~ 298 (862)
T PRK13805 233 KRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLEKFIFGKENGA 298 (862)
T ss_pred HHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999999999999999999998762 48899999999999999887665
Q ss_pred CE--Eeeccc-----CCCceeecEE------EeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhc----CCCCceEE
Q 011080 358 AT--FCQEYK-----REGNLIWPLL------LDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA----SNFGLQGC 420 (494)
Q Consensus 358 a~--v~~~~~-----~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~ 420 (494)
++ ++++.. ..|+++.||+ +.++++++++++ |+||||++|++|+|+||||+++|+ +++||+++
T Consensus 299 ~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~ 377 (862)
T PRK13805 299 LNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAV 377 (862)
T ss_pred cCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEE
Confidence 53 444321 2488899987 677889999887 789999999999999999999988 58999999
Q ss_pred EeccCHHHHHHHHhhcccceEEECCCCC---------CCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 421 VFTRDINKAILISDAMETGTVQINSAPS---------RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 421 v~s~d~~~~~~~~~~~~~g~v~iN~~~~---------~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
|||+|.+.++++++++++|+|+||.++. ...+.+|||| +.||.|+.+|+.|++.|++.|+|..+
T Consensus 378 i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 378 IYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred EECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeec
Confidence 9999999999999999999999998762 2356699997 99999999999999999999999765
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-70 Score=519.46 Aligned_cols=462 Identities=24% Similarity=0.345 Sum_probs=412.2
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHH-Hc
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILK-EQ 89 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~ 89 (494)
-.++..|||+.+.+. ......+|++ +..++.+..+++++++.|+++|.+|++.|..+|..+|.+|+++.|+++. ++
T Consensus 58 ~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistky 135 (561)
T KOG2455|consen 58 LEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKY 135 (561)
T ss_pred eeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchH
Confidence 367899999998753 3467789996 6788999999999999999999999999999999999999999999999 78
Q ss_pred HHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeec-eeEEeeCCCC
Q 011080 90 KAPIAECLVKEIAKPAKDAVTE-VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPL-GVVLAIPPFN 167 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n 167 (494)
+-+|....+.-.||...+|+.+ +.+.++++|+.+..+..+........ ..+..+...++|+ |.|++|+|||
T Consensus 136 r~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~-------~~~t~ns~~yRpleGFVaAisPFn 208 (561)
T KOG2455|consen 136 RYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQ-------TKGTWNSMEYRPLEGFVAAISPFN 208 (561)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccc-------cCCCCcceeeccccceeEEecccc
Confidence 8888888999999999999876 77899999999998887766543211 2345556788898 9999999999
Q ss_pred chHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 168 YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 168 ~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
|-....-...+|||+ ||+|+||||..+.++...+.++|+|||+|+|++|+|++++..+++.+..+|++.++.|||| .+
T Consensus 209 ftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~ 287 (561)
T KOG2455|consen 209 FTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPT 287 (561)
T ss_pred eeeeccccccChhhh-cceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHH
Confidence 987666666778875 9999999999999999999999999999999999999999999999999999999999999 87
Q ss_pred HHHHHHHc--------CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHH
Q 011080 247 GISISKKA--------GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318 (494)
Q Consensus 247 ~~~v~~~a--------~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 318 (494)
-+.+-++- ...+++.|.||||.-+|+++||++.++...++++|.++||.|.+.+|+||+++.++.+.++|.+
T Consensus 288 fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~ 367 (561)
T KOG2455|consen 288 FKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVE 367 (561)
T ss_pred HHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHH
Confidence 77665542 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCC--CCCCCCCccCCHHHHHHHHHHHHHHHHcC-CEE-eecc--cCCCceeecEEEeeCCCCCCCccccccc
Q 011080 319 KVAKLTVGAP--EDDCDITPVVTESSANFIEGLVMDAKQKA-ATF-CQEY--KREGNLIWPLLLDNVRPDMRIAWEEPFG 392 (494)
Q Consensus 319 ~~~~~~~g~p--~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v-~~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 392 (494)
.-+++++||| +-.+.+||+|....++|++++|+.|+..- .++ +||. +..|+|+.|||+...+|..++|.||+||
T Consensus 368 ~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fG 447 (561)
T KOG2455|consen 368 EHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFG 447 (561)
T ss_pred HHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccC
Confidence 9999999998 45899999999999999999999997643 455 4543 4689999999999999999999999999
Q ss_pred ceeeeEecCC--HHHHHHHH-hcCCCCceEEEeccCHHHHHHHHhhcc--cceEEECCCCCCCC-CCCCccCccCCCCCC
Q 011080 393 PVLPVIRINS--VEEGIHHC-NASNFGLQGCVFTRDINKAILISDAME--TGTVQINSAPSRGP-DHFPFQGLKDSGIGS 466 (494)
Q Consensus 393 Pvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~s~d~~~~~~~~~~~~--~g~v~iN~~~~~~~-~~~pfgG~~~SG~g~ 466 (494)
|||+|+.|+| ++|++.++ |.++|||+.+||+.|.+.+.+..++++ +|+.+||+-++.+. ...||||.+.||...
T Consensus 448 PvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND 527 (561)
T KOG2455|consen 448 PVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND 527 (561)
T ss_pred ceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC
Confidence 9999999996 79999999 568999999999999999999999876 99999999988653 357999999999985
Q ss_pred -cchHHHHHHhhceeEEE
Q 011080 467 -QGITNSINMMTKIKSTV 483 (494)
Q Consensus 467 -~~g~~~l~~~~~~k~i~ 483 (494)
.||++-+..|+.+.+|-
T Consensus 528 KaGgp~~l~RwtSp~~ik 545 (561)
T KOG2455|consen 528 KAGGPHYLLRWTSPLSIK 545 (561)
T ss_pred CCCCceEEEeecCcchhh
Confidence 48899999999998763
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-70 Score=508.01 Aligned_cols=461 Identities=27% Similarity=0.443 Sum_probs=423.6
Q ss_pred eCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHH
Q 011080 18 YDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECL 97 (494)
Q Consensus 18 i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 97 (494)
.+|+|-. +|..+..++|++.++|+.+..++.+|.+.++..+++|.+.|...|...|.++.+++.|.|+...+.|.+++
T Consensus 24 y~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lv 101 (507)
T KOG2453|consen 24 YHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLV 101 (507)
T ss_pred eeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhh
Confidence 3459965 67889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhH
Q 011080 98 VKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 177 (494)
Q Consensus 98 ~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 177 (494)
++|+||-..|..+|+++-++.++|.....+.+.+.. +|....++.....|.|+|+|++|+.+|||....-|.-
T Consensus 102 slemgkilaegvgevqeyvdicdyavglsr~l~g~i-------~pserpghalleqwnplg~vgvitafnfpcavygwnn 174 (507)
T KOG2453|consen 102 SLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKI-------FPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNN 174 (507)
T ss_pred hhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcc-------cCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCc
Confidence 999999999999999999999999887766655442 3444456666788999999999999999999999999
Q ss_pred HHHhhcCCEEEEcCCCCChHHHHH----HHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHH
Q 011080 178 APALIAGNSIVLKPPTQGAVAALH----MVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252 (494)
Q Consensus 178 ~~aL~aGN~vvlkps~~~~~t~~~----l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~ 252 (494)
+.++.+||+|+|||.+.+|+++.. +.+.|.+--+|++......| +.+.++++..+.+++++.|||| +.++.+.+
T Consensus 175 aiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq 253 (507)
T KOG2453|consen 175 AIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQ 253 (507)
T ss_pred hhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHH
Confidence 999999999999999999987754 44566777899999998888 7889999999999999999999 88887766
Q ss_pred Hc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 253 KA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 253 ~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.- ..-+..+|+||||++||.+|||+..++...++++...+||+|+..+|+++|+++||+.+++|+...+++++|.| +
T Consensus 254 ~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld 333 (507)
T KOG2453|consen 254 QVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLD 333 (507)
T ss_pred HHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCC
Confidence 43 34578899999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc---cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHH
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY---KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEG 406 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 406 (494)
+.+.+||+.++.+..+.+.-++++++.|.++..|+ +++|+|++|||+. ...|.+++.+|.|.||+.|.+|++++||
T Consensus 334 ~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea 412 (507)
T KOG2453|consen 334 SNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEA 412 (507)
T ss_pred CCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhh
Confidence 89999999999999999999999999999997654 4789999999997 8899999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeccCHHHHHHHHhh--cccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 407 IHHCNASNFGLQGCVFTRDINKAILISDA--METGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 407 i~~~n~~~~gl~a~v~s~d~~~~~~~~~~--~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
+++-|..+.||++||||.|...+-++.-- -++|.|+||.++.....+..|||.|..|-||+.|.+++++|++..+.+|
T Consensus 413 ~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstcti 492 (507)
T KOG2453|consen 413 IAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTI 492 (507)
T ss_pred heeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeee
Confidence 99999999999999999999999998775 5899999998888777778999999999999999999999999999999
Q ss_pred ecCCC
Q 011080 485 NLPTP 489 (494)
Q Consensus 485 ~~~~~ 489 (494)
+++++
T Consensus 493 nyske 497 (507)
T KOG2453|consen 493 NYSKE 497 (507)
T ss_pred ecccc
Confidence 99876
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-69 Score=552.26 Aligned_cols=373 Identities=20% Similarity=0.212 Sum_probs=330.4
Q ss_pred HHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-----------HHHHHHHHHHHHHHHHh
Q 011080 58 ETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-----------TEVVRSGDLVSYCAEEG 126 (494)
Q Consensus 58 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~~~~~ 126 (494)
++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999999999999975533 47778888888877653
Q ss_pred HHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH
Q 011080 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCF 206 (494)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l 206 (494)
.+..+.. .+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~~~~~~-------~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~ 149 (397)
T cd07077 81 GHIQDVL-------LPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLF 149 (397)
T ss_pred CcccceE-------ecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHH
Confidence 3332211 111 2356889999999999999999999 9999999999999999999999999999999999
Q ss_pred HHc---CCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHH
Q 011080 207 HLA---GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAA 282 (494)
Q Consensus 207 ~~a---GlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~ 282 (494)
.++ |+|+++++++++.+.+.+..|+.||++|.|+|||| .+++.+.+.+..+|+++|+||++++||++|||++.|++
T Consensus 150 ~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~ 229 (397)
T cd07077 150 QAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASG 229 (397)
T ss_pred HHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHH
Confidence 876 99999999999877788999999999999999999 99999998887799999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEee
Q 011080 283 NIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362 (494)
Q Consensus 283 ~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 362 (494)
.+++++|+| ||.|+++++||||+++||+|+++|+++++. +|+++..
T Consensus 230 ~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~---------------------------------~G~~~~~ 275 (397)
T cd07077 230 SVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV---------------------------------EGLKVPQ 275 (397)
T ss_pred HHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh---------------------------------cCcCcCC
Confidence 999999999 999999999999999999999999987763 4555543
Q ss_pred cccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHH----HHHHHHhcCCCCceEEEeccCHHHHHHHHhhccc
Q 011080 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE----EGIHHCNASNFGLQGCVFTRDINKAILISDAMET 438 (494)
Q Consensus 363 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~ 438 (494)
++ .++|+.|| ++|.+.++|+||||++|++|+|+| +|++++|+++|||+++|||+|.+++.++++++++
T Consensus 276 g~--~~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 276 ET--KPLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred Cc--eeeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 32 34677776 678899999999999999999996 6677889999999999999999999999999999
Q ss_pred ceEEECCCCCCC-CCCCCccCcc--CCCCCCcch-HHHHHHhhceeEEE
Q 011080 439 GTVQINSAPSRG-PDHFPFQGLK--DSGIGSQGI-TNSINMMTKIKSTV 483 (494)
Q Consensus 439 g~v~iN~~~~~~-~~~~pfgG~~--~SG~g~~~g-~~~l~~~~~~k~i~ 483 (494)
|+|+||+..... ....||||.| .||+|+++| .+++++|++.|+|+
T Consensus 348 G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 348 ASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 999999887643 2447999999 899999999 99999999999974
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-68 Score=538.11 Aligned_cols=362 Identities=41% Similarity=0.636 Sum_probs=337.9
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCcccccc
Q 011080 59 TAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVS 138 (494)
Q Consensus 59 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 138 (494)
+|+++++.|+.++..+|.++|+++++.|.+++++|+++++.|+|||+.+++.|+..+++.+++++....++.+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~---- 77 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPEL---- 77 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----
Confidence 6789999999999999999999999999999999999999999999999999999999999999888776654211
Q ss_pred CCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEE
Q 011080 139 DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISC 218 (494)
Q Consensus 139 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~ 218 (494)
+....+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|+|++++
T Consensus 78 ---~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~ 154 (367)
T cd06534 78 ---PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNV 154 (367)
T ss_pred ---cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEE
Confidence 11123456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCC
Q 011080 219 VTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQR 295 (494)
Q Consensus 219 v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~ 295 (494)
+++++.+.+..|..|++++.|+|||| .+++.+.+.+. .+|+++|+||+|++||++|+|++.|++.+++++|.++||.
T Consensus 155 ~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~ 234 (367)
T cd06534 155 VPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQI 234 (367)
T ss_pred EEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 99977778999999999999999999 99999998874 5999999999999999999999999999999999999999
Q ss_pred ccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEE
Q 011080 296 CTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLL 375 (494)
Q Consensus 296 C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptv 375 (494)
|+++++||||++++++|+++|+ ||
T Consensus 235 C~s~~~v~v~~~~~~~f~~~l~--------------------------------------------------------tl 258 (367)
T cd06534 235 CTAASRLLVHESIYDEFVEKLV--------------------------------------------------------TV 258 (367)
T ss_pred CCCCcEEEEcHHHHHHHHHhhc--------------------------------------------------------ee
Confidence 9999999999999999999987 66
Q ss_pred EeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCC
Q 011080 376 LDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFP 455 (494)
Q Consensus 376 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~p 455 (494)
+.+++++++++++|+|||+++|++|++++|+++++|++++||+++|||+|...++++++++++|+|+||+.+....+..|
T Consensus 259 ~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~p 338 (367)
T cd06534 259 LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAP 338 (367)
T ss_pred eeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence 77788899999999999999999999999999999999999999999999999999999999999999998876345589
Q ss_pred ccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 456 FQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 456 fgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
|||.++||+|+++|++++++|++.|+|.
T Consensus 339 fgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 339 FGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCcccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-67 Score=570.87 Aligned_cols=381 Identities=19% Similarity=0.196 Sum_probs=322.0
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH----------------HHHH
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE----------------VVRS 115 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e----------------v~~~ 115 (494)
.++..+++|++||+.|+.+|.++|.++|+++++.|++++++|+ .++||++.+++.+ +..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999986 5888988877653 4555
Q ss_pred HHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCC
Q 011080 116 GDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195 (494)
Q Consensus 116 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~ 195 (494)
+..++++++ ..+..+.. ..... . ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+
T Consensus 363 ~~~l~~~a~-~~~~~g~~--~~~~~--~-~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~t 434 (715)
T TIGR01092 363 AISLRQLAA-MEDPIGRV--LKRTR--I-ADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEA 434 (715)
T ss_pred HHHHHHHhc-CCCccccc--ccccc--c-CCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccc
Confidence 555666554 22211111 00000 0 11233567899999999999999 9998 5899999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCC----cEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEE
Q 011080 196 AVAALHMVHCFHLAGFPKG----LISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACI 270 (494)
Q Consensus 196 ~~t~~~l~~~l~~aGlP~g----~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~i 270 (494)
|.++..|++++.++ ||+| +++++++ +.+.+..|..||.+|+|+|||| .+|+.+++.+. +|+++|+|||||+|
T Consensus 435 p~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~-~pv~lElgGk~p~i 511 (715)
T TIGR01092 435 ARSNAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK-IPVLGHADGICHVY 511 (715)
T ss_pred hHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC-CCEEEEcCCcceEE
Confidence 99999999999999 9987 6899985 5677889999999999999999 99999999886 99999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHH
Q 011080 271 ILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLV 350 (494)
Q Consensus 271 V~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i 350 (494)
|++|||++.|++.+..++|.+ ||.|++++|||||++++|+ | .+.+++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v 558 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN------------------------G--------LLDDLI 558 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc------------------------h--------hHHHHH
Confidence 999999999987777776655 9999999999999999985 0 256777
Q ss_pred HHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHH
Q 011080 351 MDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 430 (494)
Q Consensus 351 ~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~ 430 (494)
++++++|++++++.... .|+. + .++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+.
T Consensus 559 ~~~~~~Ga~l~Gg~~~~-~~~~---~--~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~ 632 (715)
T TIGR01092 559 DMLRTEGVTIHGGPRFA-AYLT---F--NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAE 632 (715)
T ss_pred HHHHHCCCEEECCcchh-heec---c--CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 88888999997553222 2432 1 3568999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccceEEECCCCCCCCCCCCccCccCCCCCC----cchHHHHHHhhceeEEEEecC
Q 011080 431 LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGS----QGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 431 ~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~----~~g~~~l~~~~~~k~i~~~~~ 487 (494)
++++++++|.|+||+++... ...||||+|+||+|+ ++|++++++|++.|+|++..+
T Consensus 633 ~~~~~i~sG~V~vN~~~~~~-~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g 692 (715)
T TIGR01092 633 FFLQHVDSAAVFHNASTRFS-DGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKG 692 (715)
T ss_pred HHHHhCCeeEEEEeCCCCCC-CCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCC
Confidence 99999999999999875443 458999999999995 488999999999999987654
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-68 Score=537.78 Aligned_cols=376 Identities=19% Similarity=0.174 Sum_probs=317.6
Q ss_pred HHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHHhCCCh------HHHHHHHHHHHHHHHHHHHHhH
Q 011080 60 AKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAEC------LVKEIAKPA------KDAVTEVVRSGDLVSYCAEEGV 127 (494)
Q Consensus 60 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~~~~~~ 127 (494)
|++||+.|+.+|..+|.++|+++++.|++++++|+++ +++|+|||. .+++.|+..+++.++++++.+.
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3467899999999999987664
Q ss_pred HHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHH--
Q 011080 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC-- 205 (494)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~-- 205 (494)
. .+.. ... .....+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..|+++
T Consensus 81 ~-~g~~--~~~---~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 152 (398)
T TIGR00407 81 P-VGKV--IDG---RELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQ 152 (398)
T ss_pred C-Cccc--ccc---eecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHH
Confidence 3 2321 100 00112456788999999999999997 6 66888999999999999999999999999999999
Q ss_pred --HHHcCCCCCcEEEecCCc-hhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHH
Q 011080 206 --FHLAGFPKGLISCVTGKG-SEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAA 281 (494)
Q Consensus 206 --l~~aGlP~g~i~~v~g~~-~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa 281 (494)
|.++|+|+|++|++++++ .+.+..|..||+|++|+|||| ..++.+++. ..+|+++|+|||||+||++|||++.|+
T Consensus 153 ~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~-~~~~~~~e~gGk~p~iV~~dADl~~Aa 231 (398)
T TIGR00407 153 DALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT-STIPVLGHGDGICHIYLDESADLIKAI 231 (398)
T ss_pred HHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh-CCCCEEEecCCcceEEEeCCCCHHHHH
Confidence 569999999999999844 457889999999999999999 999988875 458999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe
Q 011080 282 ANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361 (494)
Q Consensus 282 ~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~ 361 (494)
+.+++|+|. +||.|++++|+|||+++||+|+++|++.++++++ .+++ .+.+.+++. .|
T Consensus 232 ~~iv~~~~~-~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~----~g---- 289 (398)
T TIGR00407 232 KVIVNAKTQ-RPSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLE----LG---- 289 (398)
T ss_pred HHHHhhhcC-CCCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHh----cc----
Confidence 999999996 4999999999999999999999999999987642 1221 133444432 11
Q ss_pred ecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceE
Q 011080 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 441 (494)
Q Consensus 362 ~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v 441 (494)
.||++ + ..+++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|.|
T Consensus 290 ----------~~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v 356 (398)
T TIGR00407 290 ----------PATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAV 356 (398)
T ss_pred ----------Ccccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEE
Confidence 13554 2 3378999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCccCccCCC----CCCcchHHHHHHhhcee
Q 011080 442 QINSAPSRGPDHFPFQGLKDSG----IGSQGITNSINMMTKIK 480 (494)
Q Consensus 442 ~iN~~~~~~~~~~pfgG~~~SG----~g~~~g~~~l~~~~~~k 480 (494)
+||+++...+. .|||=-.+-| .....|+.+++.||..|
T Consensus 357 ~iN~~~~~~~~-~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 357 YHNASTRFTDG-FRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred EEeCCCCcCCC-cccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99998765444 7998334333 34568999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=289.69 Aligned_cols=392 Identities=19% Similarity=0.209 Sum_probs=308.4
Q ss_pred HHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCC----ChHHHHHH-HHHHHHHHHHHHHH
Q 011080 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK----PAKDAVTE-VVRSGDLVSYCAEE 125 (494)
Q Consensus 51 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk----~~~~a~~e-v~~~~~~l~~~~~~ 125 (494)
.++.+..++|++|...+..++..+|.+.|.++++.|+.+.++|.++...+.-. .+.++..+ +......++.+++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999888776432 22333222 22333455555555
Q ss_pred hHHHhcCccccccC-CCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHH
Q 011080 126 GVRILGEGKLLVSD-SFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVH 204 (494)
Q Consensus 126 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~ 204 (494)
.++...-..++... ..+....+-..+..+.|+||+++| |.......+...+.||++||+||||.++.+..+...|++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 55444333333111 112223467788899999999999 999999999999999999999999999999999988887
Q ss_pred HH----HHcCCCCCcEEEecCCchh-hHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHH
Q 011080 205 CF----HLAGFPKGLISCVTGKGSE-IGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLD 278 (494)
Q Consensus 205 ~l----~~aGlP~g~i~~v~g~~~~-~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~ 278 (494)
++ .++|+|++.+|+++..+++ +.+.|.....||.|+..|+ .-.+.+.+.+. .||+-.+-|++.++|+.+||+|
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~-vPVi~~~~G~CHiyvd~~ADld 239 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT-VPVIEHGVGNCHIYVDESADLD 239 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc-CCEEecCcceEEEEecccCCHH
Confidence 65 5889999999999975444 4555666778999999999 77777766655 8999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCC
Q 011080 279 LAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAA 358 (494)
Q Consensus 279 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga 358 (494)
.|.+.++.++..+.+ .|++.+.++||+.+.++|+..|.+.+... |.
T Consensus 240 ~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~---------------------------------gv 285 (417)
T COG0014 240 KALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA---------------------------------GV 285 (417)
T ss_pred HHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc---------------------------------Ce
Confidence 999999999999998 99999999999999999999999888732 22
Q ss_pred EEeecccCCCceeecEEEee--CCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc
Q 011080 359 TFCQEYKREGNLIWPLLLDN--VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM 436 (494)
Q Consensus 359 ~v~~~~~~~g~~~~Ptvl~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~ 436 (494)
++.+...- -.++.+ .+....-+..|...+++.|..++++||||+++|..+.+++-+|.|+|...+++|.+.+
T Consensus 286 elr~d~~~------~~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~V 359 (417)
T COG0014 286 ELRGDAEA------LALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEV 359 (417)
T ss_pred EEEcCHHH------HHhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhc
Confidence 22211100 000101 1222333568999999999999999999999999999999999999999999999999
Q ss_pred ccceEEECCCCCCCCCCCCccCccCCCCCC----cchHHHHHHhhceeEEEEec
Q 011080 437 ETGTVQINSAPSRGPDHFPFQGLKDSGIGS----QGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 437 ~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~----~~g~~~l~~~~~~k~i~~~~ 486 (494)
++..|+||..+.+. ++.-||=-.+-|+.. -+|+.||+++|..|+|+.-.
T Consensus 360 DSAaVyvNASTRFt-DG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 360 DSAAVYVNASTRFT-DGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred chheEEEecccccc-cCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 99999999776544 556776555666654 37999999999999986543
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=293.54 Aligned_cols=364 Identities=17% Similarity=0.187 Sum_probs=265.3
Q ss_pred CHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHH----HcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH--H
Q 011080 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILK----EQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY--C 122 (494)
Q Consensus 49 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~ 122 (494)
+.++++..+...+...+....++.++..+++.++++.+. ..+.+..+.+...+|.+....+..+......++. .
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 456677777777777777788999999999999998885 3456677778888888876666665554444431 1
Q ss_pred HHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHH
Q 011080 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202 (494)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l 202 (494)
.......++....+ +.+.. .....++.++|+||+++|+|||||+ +.++.+++||++||++|+|||+.+|.++..|
T Consensus 83 ~~~l~~el~~~~~L--d~w~~--~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l 157 (422)
T cd07080 83 ERILERELGSPGIL--DEWVP--PGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATAL 157 (422)
T ss_pred HHHHHHhcCCcccc--cCCcc--CCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHH
Confidence 11112222211111 11110 1345678899999999999999999 7899999999999999999999999999999
Q ss_pred HHHHHHcCCCC----CcEEEe--cCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCc-ceEEEeCC
Q 011080 203 VHCFHLAGFPK----GLISCV--TGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGK-DACIILED 274 (494)
Q Consensus 203 ~~~l~~aGlP~----g~i~~v--~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~-~~~iV~~d 274 (494)
.++|.++ +|+ +.++++ +|.+.++++.|..++ |.|+|||| .+++.+.+.+...+..+|+||| +++|++++
T Consensus 158 ~~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~~~ 234 (422)
T cd07080 158 LRSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVIDRE 234 (422)
T ss_pred HHHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEecHH
Confidence 9999998 787 888888 465566889999887 99999999 9999999988656789999999 55666666
Q ss_pred C----CHHHHHHHHHHHHhhccCCCccCccEEEEccch---HHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHH
Q 011080 275 A----DLDLAAANIVKGGFSYSGQRCTAVKVALVMESV---ADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIE 347 (494)
Q Consensus 275 a----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~---~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~ 347 (494)
+ |++.+++.++++++.++||.|+|+++||||+++ +++|.++|.++++++.-..|. +++ +.....++.
T Consensus 235 a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~-----~~~-~~~~~~~~~ 308 (422)
T cd07080 235 ALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA-----LSL-SAAESAKIA 308 (422)
T ss_pred hhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC-----CCC-CHHHHHHHH
Confidence 8 999999999999999999999999999999999 899999999999987543331 111 333333333
Q ss_pred HHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHH
Q 011080 348 GLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDIN 427 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~ 427 (494)
..-..+...+.+... ....+ -+|+...++ .+. ....+-.+.|+++++++|++..++. +-.|++++..+.+
T Consensus 309 ~~r~~~~~~~~~~~~-~~~~~----~~v~~~~~~--~~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~ 378 (422)
T cd07080 309 RARLEAEFYELKGGV-SRDLG----WTVIISDEI--GLE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAE 378 (422)
T ss_pred HHHHHHHHHHHhcCC-CCCCC----eEEEEeCCC--Ccc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhh
Confidence 322222222211110 11111 144433222 221 2456778999999999999999986 6569999998887
Q ss_pred HHHHHHhhcc
Q 011080 428 KAILISDAME 437 (494)
Q Consensus 428 ~~~~~~~~~~ 437 (494)
. .++++++.
T Consensus 379 ~-~~~~~~l~ 387 (422)
T cd07080 379 L-AELADALA 387 (422)
T ss_pred H-HHHHHHHH
Confidence 7 77777765
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-27 Score=218.72 Aligned_cols=382 Identities=20% Similarity=0.208 Sum_probs=285.6
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH------HhCCChHHH-H-----HHHHHHHHHHH
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVK------EIAKPAKDA-V-----TEVVRSGDLVS 120 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a-~-----~ev~~~~~~l~ 120 (494)
+++..+.||++.+.++.++.++|.++|.++++.|..+..++.++... |+|.....- | ..+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 45677899999999999999999999999999999887776655433 444322111 1 11111112222
Q ss_pred HHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHH
Q 011080 121 YCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAAL 200 (494)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~ 200 (494)
..++ .....++. +.. ....++..-+....|+||.++| |....-.+......|+++||.+++|....+..+..
T Consensus 82 ~ia~-~edpvGRV--l~~---~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~ 153 (433)
T KOG4165|consen 82 QIAE-LEDPVGRV--LKK---TRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNA 153 (433)
T ss_pred HHHh-cccchhhh--eee---eeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHH
Confidence 2222 11112221 111 1113355666777899999999 99888888888899999999999999999888887
Q ss_pred HHHHHHH----HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCC
Q 011080 201 HMVHCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDA 275 (494)
Q Consensus 201 ~l~~~l~----~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~da 275 (494)
.|.++.. +.|.|.+.++++.. .+++.+.|..+..||+|+..|| ...+.+.... .+||..+-.|.+.++|++||
T Consensus 154 ~L~~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t-kIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 154 ALHKLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT-KIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc-cCcccccccceeEEEecccc
Confidence 7776554 55889999999998 5788898888889999999999 7766666544 49999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCccEEEEccch-HHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHH
Q 011080 276 DLDLAAANIVKGGFSYSGQRCTAVKVALVMESV-ADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAK 354 (494)
Q Consensus 276 Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 354 (494)
|++.|.+.+..+++.+.. .|++.+.+++|++. ...|++.|...++
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~--------------------------------- 277 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK--------------------------------- 277 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------
Confidence 999999999999998887 99999999999984 3446655555444
Q ss_pred HcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHh
Q 011080 355 QKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD 434 (494)
Q Consensus 355 ~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~ 434 (494)
.+|.++.++..-. .++.-.+++..-+..|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|...+++|..
T Consensus 278 ~~gVtl~agpkl~------~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~ 351 (433)
T KOG4165|consen 278 EEGVTLHAGPKLA------ALLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLK 351 (433)
T ss_pred hcCeEEecChhHH------hhcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHh
Confidence 2333443322100 0000113445556788878899999999999999999999999999999999999999999
Q ss_pred hcccceEEECCCCCCCCCCCCccCccCCCCCC----cchHHHHHHhhceeEEEEe
Q 011080 435 AMETGTVQINSAPSRGPDHFPFQGLKDSGIGS----QGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 435 ~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~----~~g~~~l~~~~~~k~i~~~ 485 (494)
.+++..|++|..+.+ .++.-||=-.+-|+.. -+|+.|++-.+..|++.-.
T Consensus 352 ~VDSa~vf~NASTRF-aDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 352 HVDSACVFHNASTRF-ADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred ccchhheeecccccc-cccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999999976654 4557887555666543 3689999999999998654
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.7e-16 Score=156.31 Aligned_cols=350 Identities=16% Similarity=0.155 Sum_probs=223.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHc--HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH--HHHHhHHHhcCccccccCCCCCC
Q 011080 69 KTPLWKRAELLHKAAAILKEQ--KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSY--CAEEGVRILGEGKLLVSDSFPGN 144 (494)
Q Consensus 69 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 144 (494)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. +......++. .....+..++....+ +.+
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~L--d~~--- 75 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESL--DGW--- 75 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHh--hcc---
Confidence 466777777777777777643 222566666667777766554 3333332221 111112222221111 111
Q ss_pred CCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCC----CcEEEe-
Q 011080 145 ERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPK----GLISCV- 219 (494)
Q Consensus 145 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~----g~i~~v- 219 (494)
......+..+.|.|++++|.|.|-|+... +.++.+|++||..|+|.|+..+.++..|.+.|.+. .|. ..+.++
T Consensus 76 ~~~~~~~~~~~p~g~v~Hi~agNvp~~~~-~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~ 153 (399)
T PF05893_consen 76 VPRGDGYVRAFPRGLVFHIAAGNVPLVGF-YSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVY 153 (399)
T ss_pred cccccchhhccCCceEEEEcCCCccchHH-HHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEE
Confidence 11233667889999999999999999766 45778889999999999999999999999999875 343 345666
Q ss_pred -cCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCC-CceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCc
Q 011080 220 -TGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGM-IPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRC 296 (494)
Q Consensus 220 -~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~-~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C 296 (494)
++.+.++.+.+.+ ..|.++.+|| .+.+.+.+.... ++.+....-.+-.++..+++++.+++.++.-.+...+|.|
T Consensus 154 ~~~~d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aC 231 (399)
T PF05893_consen 154 WPGGDEELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQAC 231 (399)
T ss_pred ecCCchHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCccc
Confidence 4545667777775 4589999999 888888886653 4444444455667777788999999999999999999999
Q ss_pred cCccEEEEcc---chHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHH-----HHHHcCCEEeecccCCC
Q 011080 297 TAVKVALVME---SVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVM-----DAKQKAATFCQEYKREG 368 (494)
Q Consensus 297 ~a~~~v~V~~---~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~Ga~v~~~~~~~g 368 (494)
.|++.|||.. .-.++|.++|.+++.+..---|.. ..+......+....+ .+...+.++.++...
T Consensus 232 sSp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-- 303 (399)
T PF05893_consen 232 SSPQVIFVETGDGDSVEEFAERLAEALERAAERYPRG------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN-- 303 (399)
T ss_pred CCCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC--
Confidence 9999999992 345788888877777542111210 012222222222222 233334344422111
Q ss_pred ceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHh-hcccceEEE
Q 011080 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISD-AMETGTVQI 443 (494)
Q Consensus 369 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~-~~~~g~v~i 443 (494)
.-||+....+ ......++-++.|+++++.+|++..++....=.|++++... .....+++ -...|.--|
T Consensus 304 ---~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 304 ---SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred ---CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 1245543221 22234556799999999999999999987442478887654 45555555 344554443
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.1e-14 Score=115.23 Aligned_cols=134 Identities=22% Similarity=0.294 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHH-HcCCEEeecccCCCceeecEEEeeCCCCCCCc
Q 011080 309 ADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAK-QKAATFCQEYKREGNLIWPLLLDNVRPDMRIA 386 (494)
Q Consensus 309 ~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~ 386 (494)
...+.+.|++..+.+++-+. .+++++ .+...++.++|+.-. ..|..+.-.+-.+|+|+.||+|. +.|+|.++
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~ya~~~f~~~tiLs-vtP~ms~y 81 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGYAEGNFVGPTILS-VTPNMSCY 81 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeeccccCCcccceEEE-ecCCccee
Confidence 35667778888888888776 556765 455677777776511 12222222234679999999998 99999999
Q ss_pred ccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCC
Q 011080 387 WEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPS 448 (494)
Q Consensus 387 ~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~ 448 (494)
.||+||||+....-.+++|+|.++|+++||....|||.+.+.++++.+..++|.+.+|.+-.
T Consensus 82 keeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 82 KEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred HhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999997643
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.9e-10 Score=101.55 Aligned_cols=167 Identities=18% Similarity=0.207 Sum_probs=123.8
Q ss_pred ceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHH
Q 011080 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFI 346 (494)
Q Consensus 267 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~ 346 (494)
.-+||.+|.|++.|+..++.+.-.-- ...+...|+|||++.|+|+++++.+++.+. +. +.+...+.+-
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf--~~~~VatVlVqEsireefi~rvr~~m~pl~-----~~-----va~Hpny~rs 73 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPF--APGAVATVLVQESIREEFIERVRSRMKPLS-----PQ-----VANHPNYLRS 73 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCcc--cCCcEEEEEEeHHHHHHHHHHHHHhCccCC-----hh-----hccCcHHHHH
Confidence 34799999999999999999875433 456888999999999999999999888652 11 1122223333
Q ss_pred HHHHHHHHHcCCEEeec-ccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC--CCCceEEEec
Q 011080 347 EGLVMDAKQKAATFCQE-YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS--NFGLQGCVFT 423 (494)
Q Consensus 347 ~~~i~~a~~~Ga~v~~~-~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~a~v~s 423 (494)
. +....-+++++.+ .+..-..-.|.++.+.+.+. +.. --.+|+++..|++..||+++++.. +++ +.|||+
T Consensus 74 l---~~i~~l~~~~I~~~~~~~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ 146 (215)
T PF07368_consen 74 L---KKIKCLNAKTIVADFENVPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWN 146 (215)
T ss_pred H---HHHHhcCCeEEEecccCCCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeC
Confidence 3 3334567877544 22222345688887766532 222 345899999999999999999974 454 999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCC-CCCC
Q 011080 424 RDINKAILISDAMETGTVQINSAPS-RGPD 452 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~ 452 (494)
+..+.+..++.++++..++||+... ..|.
T Consensus 147 ekla~~Yel~~~l~~~~f~iNC~~V~L~PI 176 (215)
T PF07368_consen 147 EKLASAYELAARLPCDTFYINCFNVDLSPI 176 (215)
T ss_pred cHHHHHHHHHHhCCCCEEEEEeccCCchhh
Confidence 9999999999999999999999765 3444
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.2e-05 Score=92.41 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=79.3
Q ss_pred CCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEec
Q 011080 141 FPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVT 220 (494)
Q Consensus 141 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~ 220 (494)
+|++. ++.+..+..|.|++++|+||| ...+.++..||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1064 LPGPT-GEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1064 LPGPT-GESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI- 1129 (1208)
T ss_pred CCCCC-CcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc-
Confidence 45554 678888999999999999999 446679999999999999999987652 22 23566555544
Q ss_pred CCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc----C-CCceEEecC
Q 011080 221 GKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA----G-MIPLQMELG 264 (494)
Q Consensus 221 g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a----~-~~~~~le~g 264 (494)
.++..+..+++++.|.|+|+ .+.+.+.+.. + ..|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 23456778889999999999 8888666653 2 456666664
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.018 Score=58.23 Aligned_cols=258 Identities=18% Similarity=0.188 Sum_probs=119.2
Q ss_pred CceEEEEeeeceeEEeeCCC-CchH-HHHHhhHHHHhhcCCEEE--EcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCC
Q 011080 147 TKYCLTSKIPLGVVLAIPPF-NYPV-NLAVSKIAPALIAGNSIV--LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~~~~aL~aGN~vv--lkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~ 222 (494)
+.....++.|+--|++..|. .+|+ ++.+..++||-.+|..=| .-|....-.....+.-+...+|+.+ +--+ |
T Consensus 97 G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G- 172 (412)
T PF00815_consen 97 GVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G- 172 (412)
T ss_dssp TEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE----
T ss_pred CcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c-
Confidence 45566788899999999993 3444 344456789999997654 4454432222333445567778744 3333 2
Q ss_pred chhhHhhhh----hCCCccEEEEecc-H--HHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCC
Q 011080 223 GSEIGDFLT----MHPSINCISFTGG-D--TGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQR 295 (494)
Q Consensus 223 ~~~~~~~L~----~~~~v~~v~ftGs-~--~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~ 295 (494)
|.+.-.+|. .-|.||.|+=.|+ - .++++....-.+- .+.+..---+|-++++|.+..+..++.-+=....
T Consensus 173 GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~-- 249 (412)
T PF00815_consen 173 GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEHDPD-- 249 (412)
T ss_dssp HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-TT--
T ss_pred cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC--
Confidence 333222332 2478999987776 2 3333333210011 1111122234556789999998888876544432
Q ss_pred ccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeec
Q 011080 296 CTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWP 373 (494)
Q Consensus 296 C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~P 373 (494)
.+.++|..+ ..++..+++.+++..+. . .+.++++.+.|
T Consensus 250 ---a~~vLvt~s~~la~~V~~~v~~~l~~l~--------------r-------~~i~~~sl~~g---------------- 289 (412)
T PF00815_consen 250 ---AQAVLVTTSEELAEAVEAEVERQLEELP--------------R-------REIAEKSLENG---------------- 289 (412)
T ss_dssp ----EEEEEES-HHHHHHHHHHHHHHHTT-T--------------T-------HHHHHHHHTT-----------------
T ss_pred ---CceEEEECCHHHHHHHHHHHHHHHHhCC--------------c-------hHHHHHHHHCC----------------
Confidence 334555554 33444444444444331 1 12223332211
Q ss_pred EEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC----
Q 011080 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS---- 448 (494)
Q Consensus 374 tvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~---- 448 (494)
.++.++|++||++++|..-.= -..|.++|+ +.+..++ .+|.|+++.++.
T Consensus 290 ----------------------~ii~~~~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AGaiFlG~~tp~a~G 343 (412)
T PF00815_consen 290 ----------------------AIIVVDSLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAGAIFLGEYTPEALG 343 (412)
T ss_dssp ----------------------EEEE-SSHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-SEEEESTT--HHHH
T ss_pred ----------------------eEEEECCHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccChhhcCCCCCHHHh
Confidence 245679999999999995432 577888886 4556666 599999998764
Q ss_pred ---CC-CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 449 ---RG-PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 449 ---~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
.+ +.-+|.+| ..|..+.-+...|++.-++
T Consensus 344 DY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 344 DYAAGPNHVLPTGG-----TARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp HHTSSS------TT-----GGGT---S-GGGGEEEEEE
T ss_pred hhccCCCccCCCCc-----cccccCCCcHHHccceeeE
Confidence 12 22356655 4455555677778776554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.17 Score=50.96 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=139.8
Q ss_pred CCceEEEEeeeceeEEeeCC---CCchHHHHHhhHHHHhhcCCEEE--EcCCCCChHHHHHHHHHHHHcCCCCCcEEEec
Q 011080 146 RTKYCLTSKIPLGVVLAIPP---FNYPVNLAVSKIAPALIAGNSIV--LKPPTQGAVAALHMVHCFHLAGFPKGLISCVT 220 (494)
Q Consensus 146 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~aL~aGN~vv--lkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~ 220 (494)
.+..+-.++.|+--|++..| .-||-..++ ...||-.+|+.=| .-|.+..- ....+.-+.+.+|+.+ |--+
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e--Iy~v- 180 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE--VYKV- 180 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH--HHHc-
Confidence 45667788899999999999 566655554 5679999998654 44544322 2222323345556543 1112
Q ss_pred CCchhhHhhhhhC----CCccEEEEecc-H--HHHHHHHHcCCCceEEecCCcce-EEEeCCCCHHHHHHHHHHHHhhcc
Q 011080 221 GKGSEIGDFLTMH----PSINCISFTGG-D--TGISISKKAGMIPLQMELGGKDA-CIILEDADLDLAAANIVKGGFSYS 292 (494)
Q Consensus 221 g~~~~~~~~L~~~----~~v~~v~ftGs-~--~~~~v~~~a~~~~~~le~gG~~~-~iV~~daDl~~aa~~i~~~~~~~~ 292 (494)
| |.+.-.+|.-. |.||.|+=.|+ - .+++... +..-+=+..|-..- +|-++++|.+..+..++.-+=.+.
T Consensus 181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~--g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~ 257 (425)
T COG0141 181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVS--GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHDP 257 (425)
T ss_pred c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhh--CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCC
Confidence 2 33333334333 67898876666 2 2232222 22222222232223 444556899998888876554332
Q ss_pred CCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceee
Q 011080 293 GQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372 (494)
Q Consensus 293 Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~ 372 (494)
. .+.|+|..+ ++|.++..+.+.+..- + ..+ .+.+.++..+
T Consensus 258 ----~-a~aiLvT~s--~~la~~v~~~v~~~l~-------------~---l~~-~ei~~~~l~~---------------- 297 (425)
T COG0141 258 ----D-AQAILVTDS--EELAEAVEAAVERQLE-------------T---LPR-AEIARKALEN---------------- 297 (425)
T ss_pred ----C-ceEEEEeCc--HHHHHHHHHHHHHHHH-------------h---ccH-HHHHHHHHHh----------------
Confidence 3 444555554 3455555544443210 0 001 1222222210
Q ss_pred cEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCCC--
Q 011080 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPSR-- 449 (494)
Q Consensus 373 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~~-- 449 (494)
|| .|+.++|++|+++++|..-.- -.-|.++|+. .+..++ ++|.|+++.++.-
T Consensus 298 ------------------~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsIFlG~~sPe~~ 352 (425)
T COG0141 298 ------------------YG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSIFLGHYSPESL 352 (425)
T ss_pred ------------------CC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccceeeecCCCCccc
Confidence 11 355679999999999985432 4567788764 445555 5999999996541
Q ss_pred ------CCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 450 ------GPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 450 ------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
.+..+|-+| +-|..+.-++..|.+.-+
T Consensus 353 GDY~aG~NHVLPT~g-----~AR~~s~L~v~dF~K~~t 385 (425)
T COG0141 353 GDYAAGPNHVLPTSG-----TARFSSGLSVYDFLKRST 385 (425)
T ss_pred cccccCCCccCCCCc-----cchhcCCccHHHhhhHHH
Confidence 122245444 445555556666665433
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.27 Score=50.05 Aligned_cols=260 Identities=22% Similarity=0.253 Sum_probs=141.9
Q ss_pred CceEEEEeeeceeEEeeCCC---CchHHHHHhhHHHHhhcCCEEEE--cCCCCChHHHHHHHHHHHHcCCCCCcEEEecC
Q 011080 147 TKYCLTSKIPLGVVLAIPPF---NYPVNLAVSKIAPALIAGNSIVL--KPPTQGAVAALHMVHCFHLAGFPKGLISCVTG 221 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~aL~aGN~vvl--kps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g 221 (494)
+...-.++.|+--|++..|. -||-. .+...+||-.+|..=|+ -|..........| -+...+|+.+ |--+ |
T Consensus 111 Gv~~g~~~~Pi~~vG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL-~AA~~~Gv~e--Iy~v-G 185 (425)
T PRK00877 111 GVRLGQRWRPIERVGLYVPGGKAAYPSS-VLMNAIPAKVAGVKEIVMVTPPPDGEINPAIL-AAAALAGVDE--VYKV-G 185 (425)
T ss_pred CeEEEEEEEehHHeEEEccCCCCCchHH-HHHhhcchhhcCCCeEEEEeCCCCCCCCHHHH-HHHHHcCCCe--eecc-C
Confidence 45566788899999999996 35444 44567899999986544 4543222222223 3557777754 2222 2
Q ss_pred CchhhHhhhh----hCCCccEEEEecc-H--HHHHHHHHcCCCceEEecCCcce--EEEeCCCCHHHHHHHHHHHHhhcc
Q 011080 222 KGSEIGDFLT----MHPSINCISFTGG-D--TGISISKKAGMIPLQMELGGKDA--CIILEDADLDLAAANIVKGGFSYS 292 (494)
Q Consensus 222 ~~~~~~~~L~----~~~~v~~v~ftGs-~--~~~~v~~~a~~~~~~le~gG~~~--~iV~~daDl~~aa~~i~~~~~~~~ 292 (494)
|.+.-.+|. .-|.||.|+=.|. - .++++.. +..-+=+- -|-+= +|-+++||.+..+..++.-+=...
T Consensus 186 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--g~V~ID~~-AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~ 261 (425)
T PRK00877 186 -GAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVF--GVVGIDMI-AGPSEILVIADETADPDFVAADLLSQAEHDP 261 (425)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHc--CCcCcCCC-CCCceeEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 333222222 3568898886666 2 2333221 21111111 13332 344556899999888887654333
Q ss_pred CCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCce
Q 011080 293 GQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNL 370 (494)
Q Consensus 293 Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~ 370 (494)
. .+.++|..+ +.++..+++.+++..+. + .+.++++.++
T Consensus 262 ----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~--------------------r-~~ia~~sl~~-------------- 301 (425)
T PRK00877 262 ----D-AQSILVTTSEELAEAVAAEVERQLATLP--------------------R-AEIARASLEG-------------- 301 (425)
T ss_pred ----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC--------------------h-HHHHHHHHHh--------------
Confidence 2 344555444 33444444444444331 0 1223333322
Q ss_pred eecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC-
Q 011080 371 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS- 448 (494)
Q Consensus 371 ~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~- 448 (494)
+| .++.++|+|||++++|..-.= -..|.++|+ ..+..++ ++|.|++..++.
T Consensus 302 --------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p---~~~l~~I~nAGaiFlG~~tp~ 354 (425)
T PRK00877 302 --------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDP---RALLDRIRNAGAIFLGPYTPE 354 (425)
T ss_pred --------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCCCCch
Confidence 12 235679999999999995432 456788886 4445555 599999987654
Q ss_pred -CCCC-CCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 449 -RGPD-HFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 449 -~~~~-~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
.+.. ..|-.=-+-+|..|..+.-+...|++.-++
T Consensus 355 a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 355 SLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred hhhhcccCCCcccCCCcceeecCCccHHHhccceeE
Confidence 1100 011111223456666667788888876554
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.28 Score=49.90 Aligned_cols=257 Identities=20% Similarity=0.253 Sum_probs=141.4
Q ss_pred CceEEEEeeeceeEEeeCCC-CchH-HHHHhhHHHHhhcCCEEEE--cCCCCChHHHHHHHHHHHHcCCCCCcEEEecCC
Q 011080 147 TKYCLTSKIPLGVVLAIPPF-NYPV-NLAVSKIAPALIAGNSIVL--KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~~~~aL~aGN~vvl--kps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~ 222 (494)
+.....++.|+.-|++..|. .+|+ ++.+...+||-.+|..=|+ -|..........|+ +...+|+.+ |--+ |
T Consensus 106 Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v-G- 180 (426)
T PRK12447 106 GVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL-G- 180 (426)
T ss_pred CeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-C-
Confidence 45566788999999999995 3333 3444467899999986554 44432212233333 456777754 2222 2
Q ss_pred chhhHhhh----hhCCCccEEEEeccHHHHHHHHH--cCCCceEEecCCcc--eEEEeCCCCHHHHHHHHHHHHhhccCC
Q 011080 223 GSEIGDFL----TMHPSINCISFTGGDTGISISKK--AGMIPLQMELGGKD--ACIILEDADLDLAAANIVKGGFSYSGQ 294 (494)
Q Consensus 223 ~~~~~~~L----~~~~~v~~v~ftGs~~~~~v~~~--a~~~~~~le~gG~~--~~iV~~daDl~~aa~~i~~~~~~~~Gq 294 (494)
|.+.-.+| -.-|.||.|+=.|. .-...+++ .+..-+=+- -|-+ -+|-+++||.+..+..++.-+=...
T Consensus 181 GAQAIAAlAyGTetIp~VDkIvGPGN-~yV~~AK~~v~g~V~ID~~-AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~-- 256 (426)
T PRK12447 181 GVQAVAAMAYGTETIKPVDMLVGPGN-AYVAEAKRQLFGRVGIDLF-AGPTETLVIADDTADPELVATDLLGQAEHGP-- 256 (426)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCc-HHHHHHHHHhcCccCcCCC-CCCceeEEEeCCCCCHHHHHHHHHHHhccCC--
Confidence 32222222 23568898876665 11122222 121111111 1222 3445556899998888876554333
Q ss_pred CccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceee
Q 011080 295 RCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372 (494)
Q Consensus 295 ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~ 372 (494)
. .+.++|..+ +.++..+++.+.+..+. + .+.++++.++
T Consensus 257 --~-a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~sl~~---------------- 296 (426)
T PRK12447 257 --N-SPAVLITTSRKLAEEVLAEIERLLAILP-----------------T----ADVASAAWRD---------------- 296 (426)
T ss_pred --C-CceEEEECCHHHHHHHHHHHHHHHHhCC-----------------H----HHHHHHHHHh----------------
Confidence 2 344555443 33445455554444431 0 1223333322
Q ss_pred cEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC--C
Q 011080 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS--R 449 (494)
Q Consensus 373 Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~--~ 449 (494)
+| .++.++|++||++++|..-.= -..|.++|+ ..+..++ ++|.|++..++. .
T Consensus 297 ------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~ 351 (426)
T PRK12447 297 ------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFLGERTNVAY 351 (426)
T ss_pred ------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccCCCCchhh
Confidence 11 235579999999999995432 355778876 4556665 599999987654 1
Q ss_pred C------CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 450 G------PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 450 ~------~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+ +.-+|- +|..|..+.-+.+.|.+.-++
T Consensus 352 GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 352 GDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred hhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 1 112344 455666666778888776554
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.45 Score=48.09 Aligned_cols=259 Identities=20% Similarity=0.230 Sum_probs=140.2
Q ss_pred CceEEEEeeeceeEEeeCCCC-chH-HHHHhhHHHHhhcCCEEEE--cCCCCChHHHHHHHHHHHHcCCCCCcEEEecCC
Q 011080 147 TKYCLTSKIPLGVVLAIPPFN-YPV-NLAVSKIAPALIAGNSIVL--KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~~~~aL~aGN~vvl--kps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~ 222 (494)
+.....++.|+--|++..|.- +|+ ++.+...+||-.+|+.=|+ -|....-.....+.-+...+|..+ +--+ |
T Consensus 83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e--iy~v-G- 158 (390)
T cd06572 83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE--IYKV-G- 158 (390)
T ss_pred CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE--Eecc-C-
Confidence 566778889999999999964 333 3444567899999986554 454321111222223456667654 2222 2
Q ss_pred chhhHhhhh----hCCCccEEEEeccHHHHHHHHHc--CCCceEEecC-CcceEEEeCCCCHHHHHHHHHHHHhhccCCC
Q 011080 223 GSEIGDFLT----MHPSINCISFTGGDTGISISKKA--GMIPLQMELG-GKDACIILEDADLDLAAANIVKGGFSYSGQR 295 (494)
Q Consensus 223 ~~~~~~~L~----~~~~v~~v~ftGs~~~~~v~~~a--~~~~~~le~g-G~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~ 295 (494)
|.+.-.+|. .-|.||.|+=.|. .-...+++. +..-+=+--| .--.+|-+++||.+..+..++.-+=...
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN-~yV~~AK~~v~g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~--- 234 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGN-IYVTAAKRLVSGDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDP--- 234 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCch-HHHHHHHHHhcCCcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCC---
Confidence 333222322 3678999876665 111222221 2111111111 2223455556899998888876543321
Q ss_pred ccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeec
Q 011080 296 CTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWP 373 (494)
Q Consensus 296 C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~P 373 (494)
. .+.++|..+ ..++..+++.+.+..+. .. +.++.+..+
T Consensus 235 -~-a~aiLvT~s~~la~~V~~~v~~ql~~l~--------------r~-------~~~~~~~~~----------------- 274 (390)
T cd06572 235 -D-SQAILVTTSEELAEAVEEEVERQLAELP--------------RR-------EIAAKSLLD----------------- 274 (390)
T ss_pred -C-CeEEEEECCHHHHHHHHHHHHHHHHhCC--------------cH-------HHHHHHHHh-----------------
Confidence 2 344555443 33444444444444331 00 112222211
Q ss_pred EEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC--C-
Q 011080 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS--R- 449 (494)
Q Consensus 374 tvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~--~- 449 (494)
--.++.++|++|+++++|..-.= ..-|.++|+.. +..++ .+|.|++..++. .
T Consensus 275 --------------------~g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~G 330 (390)
T cd06572 275 --------------------YGAIILVDDLEEAIELANEYAPE-HLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALG 330 (390)
T ss_pred --------------------CCEEEEECCHHHHHHHHHhhchh-hheeHhcCHHH---HHhhCccceEEeecCCCchhhh
Confidence 11245679999999999995432 45677888643 55555 599999998654 1
Q ss_pred ----C-CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 450 ----G-PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 450 ----~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+ +.-+|.+| ..|..+..+...|++.-++
T Consensus 331 DY~aGpNHvLPT~G-----~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 331 DYAAGPNHVLPTGG-----TARFYSGLSVDDFLKRITV 363 (390)
T ss_pred ccccCCCCccCCCc-----ceeecCCCCHHHheeccee
Confidence 1 12245544 5555556677788776554
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.48 Score=48.08 Aligned_cols=258 Identities=17% Similarity=0.163 Sum_probs=141.4
Q ss_pred CceEEEEeeeceeEEeeCCC-CchH-HHHHhhHHHHhhcCCEEEE--cCCCCChHHHHHHHHHHHHcCCCCCcEEEecCC
Q 011080 147 TKYCLTSKIPLGVVLAIPPF-NYPV-NLAVSKIAPALIAGNSIVL--KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~~~~aL~aGN~vvl--kps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~ 222 (494)
+.....++.|+--|++..|. .+|+ ++.+...+||-.+|+.=|+ -|+.........| -+...+|+.+ |--+ |
T Consensus 101 gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL-~Aa~~~Gv~e--Iy~i-G- 175 (416)
T PRK13770 101 SVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVL-AACYITQVNQ--VFQV-G- 175 (416)
T ss_pred CcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHH-HHHHHcCCCe--eecc-C-
Confidence 45566788899999999995 3333 3444567899999987654 4443211222223 3456777754 2222 2
Q ss_pred chhhHhhh----hhCCCccEEEEeccHHHHHHHHH--cCCCceEE-ecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCC
Q 011080 223 GSEIGDFL----TMHPSINCISFTGGDTGISISKK--AGMIPLQM-ELGGKDACIILEDADLDLAAANIVKGGFSYSGQR 295 (494)
Q Consensus 223 ~~~~~~~L----~~~~~v~~v~ftGs~~~~~v~~~--a~~~~~~l-e~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~ 295 (494)
|.+.-.+| -.-|.||.|+=.|. .-...+++ .+..-+=+ .+..--.+|-+++||.+..+..++.-+=...
T Consensus 176 GAQAIAAlAyGTetIp~VDkIvGPGN-~yV~~AK~~v~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~--- 251 (416)
T PRK13770 176 GAQSIAALTYGTETIPKVDKIVGPGN-QFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHDE--- 251 (416)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCc-HHHHHHHHHhcCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccCC---
Confidence 33222222 22568898876665 11122222 12111111 1112223455556899998888876554332
Q ss_pred ccCccEEEEcc--chHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeec
Q 011080 296 CTAVKVALVME--SVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWP 373 (494)
Q Consensus 296 C~a~~~v~V~~--~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~P 373 (494)
. .+.++|.. ++.++..+++.+++..+. . .+.++++.++
T Consensus 252 -~-a~~iLvT~s~~la~~V~~ev~~ql~~lp--------------r-------~~i~~~al~~----------------- 291 (416)
T PRK13770 252 -L-ARTYVISEDAQVLKDLESRIAKALPNVD--------------R-------YDIVSKSIAN----------------- 291 (416)
T ss_pred -C-CcEEEEeCCHHHHHHHHHHHHHHHHhCC--------------h-------HHHHHHHHHh-----------------
Confidence 2 34455544 334555555555555441 0 1223333321
Q ss_pred EEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC--CC
Q 011080 374 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS--RG 450 (494)
Q Consensus 374 tvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~--~~ 450 (494)
+| .++.++|+||+++++|..-.= -.-|.++|+ +.+..++ ++|.|++..++. .+
T Consensus 292 -----------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~G 347 (416)
T PRK13770 292 -----------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALFIGHYSPEVIG 347 (416)
T ss_pred -----------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceeccCCCCchhhh
Confidence 11 235679999999999995432 345778776 4555666 499999987654 11
Q ss_pred ------CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 451 ------PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 451 ------~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+.-+|.+ |..|..+.-+...|++.-++
T Consensus 348 DY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 348 DYVAGPSHVLPTN-----RTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred ccccCCCCcCCCC-----cceeccCCCcHHHeecceee
Confidence 1224444 45555555677788776554
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.96 Score=45.23 Aligned_cols=247 Identities=14% Similarity=0.106 Sum_probs=137.1
Q ss_pred CCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchh
Q 011080 146 RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSE 225 (494)
Q Consensus 146 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~ 225 (494)
++.....++.|+--|++..|.-|| ++.+...+||-.+|..=|+--+|-.......|+ +.+.+|+.+ |--+ | |.+
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-G-GAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-G-GPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-c-CHH
Confidence 355667788999999999996555 444556789999998755433331112223333 557777754 2223 2 333
Q ss_pred hHhhhhhCCCccEEEEecc-H--HHHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEE
Q 011080 226 IGDFLTMHPSINCISFTGG-D--TGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA 302 (494)
Q Consensus 226 ~~~~L~~~~~v~~v~ftGs-~--~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v 302 (494)
.-.++...-.||.|+=.|+ - .++++. .+..-+=+--|-.--+|+.+++|.+..+..++.-+=... . .+.+
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~AK~~v--~g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~-a~~i 229 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQAAKYVL--SQYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----T-SFAY 229 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHHHHHHH--hCCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----C-CcEE
Confidence 2234544448898876666 2 223221 122222222334444566667898888887776543322 2 4445
Q ss_pred EEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCC
Q 011080 303 LVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPD 382 (494)
Q Consensus 303 ~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~ 382 (494)
+|..+ +++.+++.+++.+. +..+ .|
T Consensus 230 LvT~s--~~la~~V~~~v~~~--------------------------~~~~--~~------------------------- 254 (368)
T PRK13769 230 LLSTD--AELLKAAEEIYRRE--------------------------RTSS--MG------------------------- 254 (368)
T ss_pred EEECC--HHHHHHHHHHHHHH--------------------------HHhc--CC-------------------------
Confidence 56555 45555555544421 1000 00
Q ss_pred CCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCCCC------CCCCC
Q 011080 383 MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPSRG------PDHFP 455 (494)
Q Consensus 383 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~~~------~~~~p 455 (494)
- ..++.++|+||+++++|..-.= -..|.+.+ .+..++ ++|.|+++.+...+ +.-+|
T Consensus 255 ----------~-~~iivv~~leeai~~~N~~APE-HLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLP 317 (368)
T PRK13769 255 ----------P-LEVRKVAGVEEAVRFIDEIAPE-HLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLP 317 (368)
T ss_pred ----------C-CeEEEECCHHHHHHHHHhhChH-heEeeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcCC
Confidence 0 3467889999999999995332 23333422 244455 59999996533221 11244
Q ss_pred ccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 456 FQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 456 fgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
-+ |.+|..+.-+...|++.-++
T Consensus 318 T~-----G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 318 TG-----GTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred CC-----cceeccCCCcHHHcccceeE
Confidence 44 45555556677777776554
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.51 E-value=1.1 Score=45.20 Aligned_cols=257 Identities=19% Similarity=0.226 Sum_probs=142.6
Q ss_pred CCceEEEEeeeceeEEeeCCCC---chHHHHHhhHHHHhhcCCEEEE--cCCCC-ChHHHHHHHHHHHHcCCCCCcEEEe
Q 011080 146 RTKYCLTSKIPLGVVLAIPPFN---YPVNLAVSKIAPALIAGNSIVL--KPPTQ-GAVAALHMVHCFHLAGFPKGLISCV 219 (494)
Q Consensus 146 ~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~aL~aGN~vvl--kps~~-~~~t~~~l~~~l~~aGlP~g~i~~v 219 (494)
.+.....++.|+.-|++..|.- ||- +.+...+||-.+|..=|+ -|... .......|+ +.+.+|+.+ +--+
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 153 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE--VYKV 153 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe--ehhc
Confidence 3566677889999999999963 444 444557799999986554 44422 122223333 557777754 2222
Q ss_pred cCCchhhHhhh----hhCCCccEEEEecc-H--HHHHHHHHcCCCceEE-ecCCcceEEEeCCCCHHHHHHHHHHHHhhc
Q 011080 220 TGKGSEIGDFL----TMHPSINCISFTGG-D--TGISISKKAGMIPLQM-ELGGKDACIILEDADLDLAAANIVKGGFSY 291 (494)
Q Consensus 220 ~g~~~~~~~~L----~~~~~v~~v~ftGs-~--~~~~v~~~a~~~~~~l-e~gG~~~~iV~~daDl~~aa~~i~~~~~~~ 291 (494)
| |.+.-.+| -.-|.||.|+=.|. - .++++.. +..-+=+ .+..--.+|-+++||.+..+..++.-+=..
T Consensus 154 -G-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~--g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 229 (393)
T TIGR00069 154 -G-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVF--GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHD 229 (393)
T ss_pred -C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhc--CccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccC
Confidence 2 33322222 23568898876665 2 2232211 2111111 111222345555689999888887655433
Q ss_pred cCCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCc
Q 011080 292 SGQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN 369 (494)
Q Consensus 292 ~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~ 369 (494)
. . .+.++|..+ +.++..+++.+.+..+. + .+.++++.++
T Consensus 230 ~----~-a~~iLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~al~~------------- 270 (393)
T TIGR00069 230 P----D-AQAILVTTSEELAEAVQEEIERQLATLP-----------------R----REIARKSLED------------- 270 (393)
T ss_pred C----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHHHh-------------
Confidence 2 2 344555443 34555555555555431 0 1233333322
Q ss_pred eeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEECCCCC
Q 011080 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPS 448 (494)
Q Consensus 370 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN~~~~ 448 (494)
+| .++.++|++|+++++|..-.= -.-|.++|+ +.+..++ ++|.|++..++.
T Consensus 271 ---------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~nAGaiFlG~~tp 322 (393)
T TIGR00069 271 ---------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRNAGSIFLGPYTP 322 (393)
T ss_pred ---------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCccceeccCCCCc
Confidence 11 235679999999999995432 345777776 4555555 599999987654
Q ss_pred --CC------CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 449 --RG------PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 449 --~~------~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
.+ +.-+|-+ |..|..+.-+...|++.-++
T Consensus 323 ~a~GDY~aG~NHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 323 EAAGDYAAGPNHVLPTG-----GTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred hhhhhccCCCCcccCCC-----cceeecCCccHHHhccceeE
Confidence 11 1124444 45566666677888776554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=1.2 Score=45.46 Aligned_cols=255 Identities=21% Similarity=0.231 Sum_probs=141.2
Q ss_pred CCceEEEEeeeceeEEeeCCCC---chHHHHHhhHHHHhhcCCEEE--EcCCCC-ChHHHHHHHHHHHHcCCCCCcEEEe
Q 011080 146 RTKYCLTSKIPLGVVLAIPPFN---YPVNLAVSKIAPALIAGNSIV--LKPPTQ-GAVAALHMVHCFHLAGFPKGLISCV 219 (494)
Q Consensus 146 ~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~aL~aGN~vv--lkps~~-~~~t~~~l~~~l~~aGlP~g~i~~v 219 (494)
.+.....++.|+.-|++..|.- ||-. .+..++||-.+|..=| .-|... .......|+ +.+.+|+.+ +--+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence 3555667889999999999963 4444 4456789999998654 445432 122333333 567777754 2222
Q ss_pred cCCchhhHhhhh----hCCCccEEEEecc-H--HHHHHHHHcCC---CceEEecCCcce--EEEeCCCCHHHHHHHHHHH
Q 011080 220 TGKGSEIGDFLT----MHPSINCISFTGG-D--TGISISKKAGM---IPLQMELGGKDA--CIILEDADLDLAAANIVKG 287 (494)
Q Consensus 220 ~g~~~~~~~~L~----~~~~v~~v~ftGs-~--~~~~v~~~a~~---~~~~le~gG~~~--~iV~~daDl~~aa~~i~~~ 287 (494)
| |.+.-.+|. .-|.||.|+=.|. - .++++.. +. .-+=+- -|-+= +|-+++||.+.++..++.-
T Consensus 186 -G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~~~VgID~~-AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 186 -G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSEAMVSIDMP-AGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred -C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCCCccccCCC-CCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 2 333222222 2568898886666 2 2232211 21 111111 13333 3444568999998888875
Q ss_pred HhhccCCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc
Q 011080 288 GFSYSGQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK 365 (494)
Q Consensus 288 ~~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~ 365 (494)
+=... . .+.++|..+ +.++..+++.+.++.+. + .+.++++...|
T Consensus 261 AEHdp----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~-----------------r----~~i~~~sl~~g-------- 306 (431)
T PLN02926 261 AEHGP----D-SQVVLVAVGDVDLDAIEEEVEKQCQSLP-----------------R----GEIASKALGHS-------- 306 (431)
T ss_pred hccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC-----------------h----HHHHHHHHHCC--------
Confidence 54333 2 344555544 23444444444444331 0 12222222211
Q ss_pred CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEEC
Q 011080 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQIN 444 (494)
Q Consensus 366 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~iN 444 (494)
.++.++|+||+++++|..-.= -..|.++|+ +.+..++ ++|.|++.
T Consensus 307 ------------------------------~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i~nAGaiFlG 352 (431)
T PLN02926 307 ------------------------------FIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKIDNAGSVFLG 352 (431)
T ss_pred ------------------------------EEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhcCccceeccC
Confidence 245679999999999985332 345778776 4455555 59999998
Q ss_pred CCCC--CC------CCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 445 SAPS--RG------PDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 445 ~~~~--~~------~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
.++. .+ +.-+|-| |.+|..+.-+...|.+.-++
T Consensus 353 ~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 353 RWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred CCCchhhhccccCcCcccCCC-----cceeecCCCcHHHhcceeeE
Confidence 7654 11 1124444 45566666778888776554
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.26 Score=57.65 Aligned_cols=96 Identities=16% Similarity=0.244 Sum_probs=66.3
Q ss_pred CCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEec
Q 011080 141 FPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVT 220 (494)
Q Consensus 141 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~ 220 (494)
+|++. ++.+.....|.|+|+++++-.- ..+.+++.+|++||.+|+..++. .. +++ +++|+.+.+.+.
T Consensus 1173 LPGPT-GE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~----~~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1173 LPGPT-GERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HR----ALV--AALPAAVQARIQ 1239 (1318)
T ss_pred CCCCC-CCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hH----HHH--HhccHHHHhHhh
Confidence 45554 6777788889999999987333 56788999999999998865442 11 122 569998888763
Q ss_pred CCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 221 GKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 221 g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
-. . ........++.|.|.|. ...+.+.++
T Consensus 1240 ~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1240 LA---K-DWQLADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred hc---c-ccccccCCccEEEEeCCHHHHHHHHHH
Confidence 21 1 22223456899999998 766665554
|
|
| >KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.55 E-value=17 Score=35.12 Aligned_cols=166 Identities=20% Similarity=0.250 Sum_probs=86.0
Q ss_pred CceEEEEeeeceeEEeeCCCCchH--HHHHhhHHHHhhcCCEEEEc--CCCCChHHHHHHHHHHHHcCCCCCcEEEecCC
Q 011080 147 TKYCLTSKIPLGVVLAIPPFNYPV--NLAVSKIAPALIAGNSIVLK--PPTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~n~P~--~~~~~~~~~aL~aGN~vvlk--ps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~ 222 (494)
+-.+....+|+|-|+...|.---+ ++.+..-.||-.+||.-|+- |....--.+..+.-+..++|.-. ++-..
T Consensus 117 GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atPprKDG~v~pEvvY~A~k~Ga~~----I~lAG 192 (446)
T KOG2697|consen 117 GVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATPPRKDGSVCPEVVYCAKKAGATH----ILLAG 192 (446)
T ss_pred ceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecCCCcCCccCcceeeehhhcChhh----eeccc
Confidence 344555567888887777754321 33444456888899976553 33333333333334445554432 22222
Q ss_pred chhhHhh----hhhCCCccEEEEeccH---HHHHHHHHcCCCceEEecC-Ccce--EEEeCCCCHHHHHHHHHHHHhhcc
Q 011080 223 GSEIGDF----LTMHPSINCISFTGGD---TGISISKKAGMIPLQMELG-GKDA--CIILEDADLDLAAANIVKGGFSYS 292 (494)
Q Consensus 223 ~~~~~~~----L~~~~~v~~v~ftGs~---~~~~v~~~a~~~~~~le~g-G~~~--~iV~~daDl~~aa~~i~~~~~~~~ 292 (494)
|.+.-.+ ....|.|+.|+=.|.+ .++.+.+.....-+...+. |.+- +|-+++||.+..+..++.-+-.
T Consensus 193 GAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQNd~~AlvsIDmPAGPSEVLVIADE~a~p~~vA~DLLSQAEH-- 270 (446)
T KOG2697|consen 193 GAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQNDYEALVSIDMPAGPSEVLVIADEHASPVYVAADLLSQAEH-- 270 (446)
T ss_pred cHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheeccccceEEeccCCCCceEEEEecCCCChHHHHHHHHhHhhc--
Confidence 3332222 3347888888766662 2333333332233444443 3333 5557778999888877754422
Q ss_pred CCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 293 GQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 293 Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
| .--+.++|.-+.-.+.++++.+++.
T Consensus 271 G---~DSQviLv~V~lS~~~~~~Iq~ai~ 296 (446)
T KOG2697|consen 271 G---PDSQVILVVVGLSVDMLNAIQEAIA 296 (446)
T ss_pred C---CCceEEEEEecCCHHHHHHHHHHHH
Confidence 2 2234555554444555555555444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 494 | ||||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-122 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-122 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-122 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-121 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-121 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-60 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-54 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-53 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-53 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-53 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-53 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-51 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 4e-50 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-49 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-49 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-49 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-48 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 5e-47 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-46 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 9e-46 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 2e-45 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-45 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-45 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-45 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 4e-45 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 7e-45 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 9e-45 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-44 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 6e-44 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 6e-44 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-44 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-43 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-43 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 8e-43 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 9e-43 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 2e-42 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-41 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-41 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 3e-41 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 5e-41 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 5e-41 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 6e-41 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 7e-41 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 7e-41 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 8e-41 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-40 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-40 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-40 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-40 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 2e-40 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 6e-40 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 6e-40 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 8e-40 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 9e-40 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-39 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-39 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-39 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-39 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-39 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 9e-39 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-38 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 6e-38 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 2e-37 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 3e-34 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-34 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-34 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-33 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-32 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 3e-32 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 7e-32 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-28 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-28 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 4e-28 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-27 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 7e-27 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-26 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-23 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 3e-18 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-17 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-17 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-17 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-17 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-16 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 9e-16 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-15 | ||
| 3k9d_A | 464 | Crystal Structure Of Probable Aldehyde Dehydrogenas | 5e-06 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 9e-05 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 1e-04 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-04 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-04 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 3e-04 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 6e-04 |
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From Listeria Monocytogenes Egd-E Length = 464 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 494 | |||
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-155 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-150 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-142 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-135 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-132 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-129 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-121 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-120 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 1e-115 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 1e-115 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-114 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 1e-114 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-113 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-113 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 1e-112 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 1e-112 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 1e-112 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 1e-111 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-111 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 1e-110 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-110 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 1e-110 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 1e-110 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-109 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-108 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 1e-107 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-106 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 1e-105 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-105 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-102 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-102 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-101 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-101 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-101 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 5e-95 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 2e-92 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-89 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 9e-84 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 8e-83 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 1e-80 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-79 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 3e-78 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 2e-47 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 3e-45 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 621 bits (1604), Expect = 0.0
Identities = 243/479 (50%), Positives = 321/479 (67%), Gaps = 3/479 (0%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+G W +S +G+ ++I P + + A +QEEVN ++ AK AQK W P+
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIH 71
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+R +LL+ A +L+E+K I E ++ E+AKP K A+ EV R+ D++ + A+E +R+ GE
Sbjct: 72 ERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE- 130
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
L D F G K L + PLGVVLAI PFNYPVNLA +KIAPAL+ GN++V KP T
Sbjct: 131 -TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
QG+++ + MV AG P+G+I VTG+GS IGD L HP I+ I+FTGG TG IS+
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249
Query: 253 KAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
KA MIP+ +ELGGKD I+L+DADL L A+ IV G FSYSGQRCTA+K V +SVAD L
Sbjct: 250 KAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQL 309
Query: 313 VEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372
V +K V +LTVG+PEDD DITPV+ E SA FI+GL+ DA + AT KR+GNL+
Sbjct: 310 VANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLS 369
Query: 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432
P LLD+V P MR+AWEEPFGPVLP+IR+ E I N S++GLQ +FT+D ++AI I
Sbjct: 370 PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429
Query: 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTPSY 491
+E GTV IN+ RGPDHFPF G+K SG+G QGI S+ MT+ + TV+NL Y
Sbjct: 430 GKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAENLY 488
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 602 bits (1556), Expect = 0.0
Identities = 245/474 (51%), Positives = 314/474 (66%), Gaps = 5/474 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + I P + V A + EEV+ V +AK AQ +W
Sbjct: 5 YKNYVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 62
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ GE
Sbjct: 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE- 121
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 122 -VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 180
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG G I K
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 240
Query: 253 KAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
AGM P+ +ELGGKD+ I+LEDADL+L A NI+ G F YSGQRCTAVK LVMESVAD L
Sbjct: 241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 313 VEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372
VEK++ KV LT+G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 301 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 360
Query: 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A I
Sbjct: 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 420
Query: 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 421 AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 451 bits (1162), Expect = e-155
Identities = 152/496 (30%), Positives = 241/496 (48%), Gaps = 16/496 (3%)
Query: 2 AVFEEIVDENG---VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVE 58
+ E ++ E G VY + G W SG+ + + +P +V + ++EEV + ++
Sbjct: 4 GLLEGVIKEKGGVPVYPSYLAGEWG--GSGQEIEVKSPIDLATIAKVISPSREEVERTLD 61
Query: 59 TAKLAQK-SWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGD 117
+ S P +R +L KAA I++ AE LV KP AV EV + D
Sbjct: 62 VLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVD 121
Query: 118 LVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 177
+ + +I G+ + + + L + PLGVV AI PFNYP+ AV+KI
Sbjct: 122 RLRLAELDLKKIGGD---YIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKI 178
Query: 178 APALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSIN 237
+ I GN++V+KP + A V AGFP I+ + G + + + +
Sbjct: 179 TYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVA 237
Query: 238 CISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRC 296
+SFTG + G + K G+ MELGG D I+LEDADLDLAA I +G +SY+GQRC
Sbjct: 238 AVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRC 297
Query: 297 TAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQ 355
A+K+ L V LVE+V +++ L VG P + D+ P+++ S+ + + + DA +
Sbjct: 298 DAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVE 357
Query: 356 KAATFCQEYKREG-NLIWPLLLD---NVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCN 411
K +R G + P ++ + DM + E F PV + + +++ I N
Sbjct: 358 KGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELAN 417
Query: 412 ASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITN 471
+GL VF RD+ K +E G + IN P G ++PF G K SG+ +GI
Sbjct: 418 GRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGY 477
Query: 472 SINMMTKIKSTVINLP 487
++ +T K+ V N
Sbjct: 478 AVEAVTAYKTIVFNYK 493
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 437 bits (1127), Expect = e-150
Identities = 158/477 (33%), Positives = 255/477 (53%), Gaps = 20/477 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG W + + + +INP + + ++ A ++EE + ++TA+ ++ P+ KR
Sbjct: 3 FIDGKWI---NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L A +KE+K +A+ L + KP K A EV RS A E
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDE---- 115
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
P ++R T + P+G+V AI PFN+P+NL+ KIAPA+ GN IV P ++
Sbjct: 116 ---VIPSDDRL--IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAP 170
Query: 197 VAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+ + + A P G+ + +TG G +GD + ++ +N ISFTG G I+
Sbjct: 171 LVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELIT 230
Query: 252 KKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADT 311
KKAG + +ELGG + I+L+DADL+ A ++KG F Y+GQ C +V + LV ES+AD
Sbjct: 231 KKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADK 290
Query: 312 LVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNL 370
+E K L VG P ++ D+ P+++ A ++E +V A + KR+ L
Sbjct: 291 FIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKAL 350
Query: 371 IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI 430
+P +L+ V D + E F PV+P+IR N EE I N++ +GL +FT DINK++
Sbjct: 351 FYPTILE-VDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSL 408
Query: 431 LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487
++ +E G V IN + D+ PF G+K SG+G +G+ ++ M+ IK+ +I+
Sbjct: 409 KFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-142
Identities = 151/485 (31%), Positives = 234/485 (48%), Gaps = 14/485 (2%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
K G W + +S + T INP + + +V+ E AK AQ WA TP
Sbjct: 13 TKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAA 72
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+R+ ++++AA +L+E + I E L+KE A E+ +G++ A R+ G
Sbjct: 73 ERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGR- 131
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
P N K ++ GVV I P+N+P+NL++ +APAL GN++V+KP +
Sbjct: 132 ------ISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPAS 185
Query: 194 QGAVAALHM-VHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
V + F AG P G+IS V G GSEIGD H ISFTG G +
Sbjct: 186 DTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245
Query: 252 KKAG----MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES 307
+ A M + +ELGG ++L DAD+D AA G F + GQ C ++ +V +
Sbjct: 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAA 305
Query: 308 VADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR 366
V D +EK V + G P + + PV+ +S + ++ + AK++ AT E
Sbjct: 306 VHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI 365
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
EG L+ P + +V DM IA EE FGP++ V++ + NAS+FGL V+++DI
Sbjct: 366 EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDI 425
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
++A + +++G V IN H F G K+SG+G +I T + I
Sbjct: 426 DRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKR 485
Query: 487 PTPSY 491
+
Sbjct: 486 SAENL 490
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 398 bits (1025), Expect = e-135
Identities = 135/488 (27%), Positives = 222/488 (45%), Gaps = 24/488 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINP-TTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y + G W + + + +NP + + E +E A A K+W P
Sbjct: 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQ 95
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
R+ LL KAAA+++ +K + LV E+ K +A +V + D + Y A +R
Sbjct: 96 EDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYP 155
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ +PG + + +PLG + I P+N+PV + I + GN+++ KP
Sbjct: 156 A--VEVVPYPG----EDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA 209
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
V + FH AGFP G+++ + G G E+G +L HP I I+FTG + G+ I
Sbjct: 210 EDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269
Query: 252 KKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
+ AG +E GGK+A I+ E AD DLAA +V + + GQ+C+A +
Sbjct: 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLI 329
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ- 362
+ + + ++E+V + +L+VG E++ D+ PVV+ + + K +
Sbjct: 330 LTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGG 389
Query: 363 -EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ EG I P + V P RIA EE FGPVL VIR+ E + N + +GL G V
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHF--PFQGLKDSGIGSQ-GITNSINMMTK 478
++R G + N G PF G K SG ++ G + + + +
Sbjct: 450 YSRKREHLEWARREFHVGNLYFN-RKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLE 508
Query: 479 IKSTVINL 486
+K+
Sbjct: 509 MKAVAERF 516
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 392 bits (1010), Expect = e-132
Identities = 139/491 (28%), Positives = 231/491 (47%), Gaps = 24/491 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINP-TTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y +G + + NP + V Q+ K +++A A ++W
Sbjct: 38 YPLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNP 95
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+RA +L KAAAI++ +K + LV E KP K+A + + D + Y A + + +
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNR- 154
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
GK ++S PG + P+GV + I P+N+ + + V ++ GN++VLKP
Sbjct: 155 GKEILSR--PG----EQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPA 208
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+ V A V AG PKG+I+ V G G+E+GD+L HP + I+FTG D G+ +
Sbjct: 209 STTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268
Query: 252 KKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
++A + + +E+GGKD ++ DADLDLAA +I+ F +SGQ+C+A A+
Sbjct: 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAV 328
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
+ + V D ++EK A LTVG P + D + PV+ E + I + K++
Sbjct: 329 IHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTG 388
Query: 363 --EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
G I P ++ ++ P+ I EE FGPV+ + N + + N + +GL G
Sbjct: 389 GEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGA 448
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPD-HFPFQGLKDSGIGSQ-GITNSINMMTK 478
V TR+ G + N + + PF G K SG S+ G + + + +
Sbjct: 449 VITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQ 508
Query: 479 IKSTVINLPTP 489
K+
Sbjct: 509 AKTVSEMYAEN 519
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 383 bits (986), Expect = e-129
Identities = 136/482 (28%), Positives = 218/482 (45%), Gaps = 11/482 (2%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
K F +G W SG++ I+NP + T +++ + A+ AQK WAK+
Sbjct: 8 KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTED 67
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGK 134
R +L KA L E + I + +E + E+ ++ ++ + G
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGG--- 124
Query: 135 LLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 194
P + K ++PLGV+ +I PFN+P+NL++ IAPA+ GNS+V KP Q
Sbjct: 125 ---VKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 195 GAVAALHMV-HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
A++ ++ F AG P G+++ + EIGD + +P ISFTG G I +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
AG + +ELGG + +L DAD+D A + G F + GQ C + +V + V D
Sbjct: 242 IAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYD 301
Query: 311 TLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGN 369
VEK A+V +L G + + P++ E ++ AK E KR GN
Sbjct: 302 EFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN 361
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
++ P + + +IA E F P+ +I+ S +E I N + +GL VFT D+ K
Sbjct: 362 VLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKG 421
Query: 430 ILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTP 489
+ +++G +N + F G K SG+G G + T K I
Sbjct: 422 EKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYR 481
Query: 490 SY 491
Y
Sbjct: 482 KY 483
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 378 bits (974), Expect = e-121
Identities = 131/491 (26%), Positives = 226/491 (46%), Gaps = 32/491 (6%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y F +G + + +NP + ++ EV + AK A +W T
Sbjct: 532 YPLFINGKEV--RTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDP 589
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
RAE L KAA +++ ++ V EI K A +V + D + Y A E +R+
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQP 649
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
++ PG + P GV I P+N+P+ +++ + A++ GN +V KP
Sbjct: 650 QRV---GHAPG----ELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPS 702
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
++ H+V F AG P+G+ + G+GS +GD+L HP I+ I+FTG +TG+ I
Sbjct: 703 GITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRII 762
Query: 252 KKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
++A + + E+GGK+A II +DADLD A +++ F + GQ+C+A +
Sbjct: 763 ERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVI 822
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
V+++V D +E++ + VG ED + V + + I+ K++ +
Sbjct: 823 VLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYE 882
Query: 363 EYKRE--GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
G + ++ ++P+ RIA EE FGPVL V+R ++ I N++ F L G
Sbjct: 883 SPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGG 942
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRG-----PDHFPFQGLKDSGIGSQ-GITNSIN 474
+F+R G + IN R + PF G + SG+G++ G + +
Sbjct: 943 IFSRSPEHLAKARREFRVGNLYIN----RNNTGALVERQPFGGARMSGVGTKAGGPDYLL 998
Query: 475 MMTKIKSTVIN 485
+ N
Sbjct: 999 HFMDPRVVTEN 1009
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 360 bits (926), Expect = e-120
Identities = 125/459 (27%), Positives = 199/459 (43%), Gaps = 21/459 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G W + G+++ ++P + + + +V+ V A+ A +WA+ PL +R
Sbjct: 9 YIAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI 67
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
ELL + AA LK + +A + +E KP ++ TEV + V+ + GE
Sbjct: 68 ELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGE---- 123
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
S + P GVV P+N+P +L I PAL+AGN +V KP
Sbjct: 124 KSGPLAD----ATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTP 179
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
A + + AG P G+++ V G G E G L H ++ + FTG TG + + G
Sbjct: 180 KVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG 238
Query: 256 ---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV-ADT 311
L +E+GG + ++ E ADLD A I++ F +GQRCT + LV + D
Sbjct: 239 GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDA 298
Query: 312 LVEKVKAKVAKLTVGAPEDDC--DITPVVTESSANFIEGLVMDAKQKAATFCQEYKR--- 366
L+ ++ A A L VG ++ + V++ S+A + K A +
Sbjct: 299 LLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPID 358
Query: 367 EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 426
L+ P +LD V EE FGP+L VIR + I NA+ +GL + +
Sbjct: 359 GAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSR 417
Query: 427 NKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+ G V N + PF G+ SG
Sbjct: 418 ERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH 456
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 347 bits (892), Expect = e-115
Identities = 135/463 (29%), Positives = 221/463 (47%), Gaps = 25/463 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
K + +G W +S+S +++ +INP T + +V + +V+K VE A + T +
Sbjct: 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVK 67
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSG-DLVSYCAEEGVRILGE 132
+R LL K + +K I + + E+ P + + G + +
Sbjct: 68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARD-------- 119
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
D++ ER L K +GV I P+N+P N K+A A AG+ +VLKP
Sbjct: 120 ----ALDNYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+ AA+ + F G PKG+ + V G G+ +G+ L+ HP + +SFTG TG I
Sbjct: 176 EETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235
Query: 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
+KA + +ELGGK I+L+D D+ AA + +GQ CTA LV +
Sbjct: 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295
Query: 310 DTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ------ 362
D + ++K + +++ VG P + + P++++ + ++ + ++ A
Sbjct: 296 DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
E +G P + NV M IA EE FGPV+ VI N ++E I N + +GL G V
Sbjct: 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+D ++ ++E GTV+IN A R P PF G K SG+G
Sbjct: 416 GKDKETLHKVARSIEAGTVEINEAG-RKP-DLPFGGYKQSGLG 456
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-114
Identities = 131/490 (26%), Positives = 222/490 (45%), Gaps = 23/490 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINP-TTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKT 70
Y+ DG ++SG ++ ++P + + ++V K V A+ A W +
Sbjct: 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRM 82
Query: 71 PLWKRAELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVR 128
+R+ L+ K A ++ ++ +A E L E+ KP A E+ DL SY A +
Sbjct: 83 SGAERSRLMFKVADLILARQEELALIESL--EVGKPIAQARGEIGFCADLWSYAAGQARA 140
Query: 129 ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
+ G+ + + L + P+GVV I P+N+P +A ++ A+ +G ++V
Sbjct: 141 LEGQ-------THNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVV 193
Query: 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247
LKP + ++ + AG P G+ + VTG G G L P+++ ++FTG G
Sbjct: 194 LKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVG 253
Query: 248 ISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVM 305
+ + A + + +ELGGK I+ DADLD AA I G + +GQ C + LV
Sbjct: 254 TKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQ 313
Query: 306 ESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF---- 360
E + D L+E++ K+ G P + I +++E+ A + V A
Sbjct: 314 EGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGG 373
Query: 361 CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
+ + G P + V PDM IA EE FGPVL + + +E + NA+ FGL
Sbjct: 374 ERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSAS 433
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
V++ ++ A+ + G INS G P G K SG+G + + ++ K
Sbjct: 434 VWSTNLETALQTIRRIRAGRCWINS-VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFK 492
Query: 481 STVINLPTPS 490
+ L P+
Sbjct: 493 GVHVTLGRPA 502
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 344 bits (885), Expect = e-114
Identities = 141/488 (28%), Positives = 231/488 (47%), Gaps = 19/488 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-----QKSWA 68
+ F +G W+ K + +INP T+ + A T+E+V+ V AK A WA
Sbjct: 8 RQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWA 67
Query: 69 KTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVR 128
RA L AA + E+K +A+ + KP +A ++ Y A+ +
Sbjct: 68 TASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEK 127
Query: 129 ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
+ + + S P + + P+GVV I P+NYP+ +A K+APAL AG + +
Sbjct: 128 L--DARQKAPVSLPMDT--FKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAI 183
Query: 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247
LKP ++ L + G P G+++ +TG G E G L HP ++ ++FTG TG
Sbjct: 184 LKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243
Query: 248 ISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVM 305
I A + P+ +ELGGK ++ ED DLD AA + G F +GQ C+A ++
Sbjct: 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILH 303
Query: 306 ESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY 364
ES+A + ++ + + + P E+ C + PVV+E I V +AK + AT
Sbjct: 304 ESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGG 363
Query: 365 KREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
R +L I P ++ +V +M+I EE FGPVL V ++ EE I N + +GL
Sbjct: 364 SRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGA 423
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
V + D+ + ++ A + G V +N + P+ G+K SG G + ++ +
Sbjct: 424 AVISNDLERCERVTKAFKAGIVWVNCSQPCFT-QAPWGGVKRSGFGRELGEWGLDNYLSV 482
Query: 480 KSTVINLP 487
K +
Sbjct: 483 KQVTQYIS 490
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-113
Identities = 146/486 (30%), Positives = 238/486 (48%), Gaps = 21/486 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS--WAKTP 71
+ + DG W +S++ + IINP ++ F V T+E+ + + A+ A +S W++
Sbjct: 33 QRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQET 92
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILG 131
R + + A +KE + +A + K +++ ++ ++ Y A + G
Sbjct: 93 AETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGG 152
Query: 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP 191
E K P+GVV I P+NYP+ A KIAPAL G S+V+KP
Sbjct: 153 E-------MIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKP 205
Query: 192 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250
+ + + GFPKG I+ + G GSE+GD ++ H ++ +SFTGG +TG I
Sbjct: 206 SEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHI 265
Query: 251 SKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV 308
K A + + +ELGGK+ II +DAD +LA + GG+ ++GQ C+A LV S+
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSI 325
Query: 309 ADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAAT-------F 360
D + + +V K+ +G + D ++ PV++ N IE + AK + AT
Sbjct: 326 KDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRP 385
Query: 361 CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
++ ++G P ++ N MRI EE FGPV+ V + +E I N S +GL G
Sbjct: 386 DRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGA 445
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VF++DI KA +++ ++ GTV IN P+ G K SGIG + + K
Sbjct: 446 VFSKDIGKAQRVANKLKLGTVWINDFHPYFA-QAPWGGYKQSGIGRELGKEGLEEYLVSK 504
Query: 481 STVINL 486
+ N
Sbjct: 505 HILTNT 510
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 342 bits (879), Expect = e-113
Identities = 134/467 (28%), Positives = 218/467 (46%), Gaps = 24/467 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ + DG + + ++NP T R+ E+ K ++ A+ AQ W P
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA L K +A ++E+ + I+ +V+E K + A EV + D + Y AE R G
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEG-- 124
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+ + + L K LGV I P+N+P L K+APAL+ GN+IV+KP
Sbjct: 125 -----EIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSE 179
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
A+ G P+G+ + V G+G +G L +P + +S TG G I
Sbjct: 180 FTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMA 239
Query: 253 KA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
A + + +ELGGK I+++DADL+LA IV SGQ C + V + + D
Sbjct: 240 TAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 311 TLVEKVKAKVAKLTVGAPEDDCDIT--PVVTESSANFIEGLVMDAKQKAATFC---QEYK 365
V ++ + + G P + DI P++ ++ +E V A ++ A + +
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
+G P LL +VR +M I EE FGPVLPV+ +++E+ I N S++GL ++T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 426 INKAILISDAMETGTVQIN----SAPSRGPDHFPFQGLKDSGIGSQG 468
+N A+ ++ G IN A G + SGIG
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQG-----FHAGWRKSGIGGAD 461
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 341 bits (877), Expect = e-112
Identities = 139/491 (28%), Positives = 226/491 (46%), Gaps = 33/491 (6%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
F DG + + ++G I P T + ++ A T V + + +AK AQK WA
Sbjct: 15 ASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPM 74
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCA------EEG 126
R +L +AA I++E+ ++ + KP ++ V + D + G
Sbjct: 75 ARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNG 134
Query: 127 VRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
I G T ++PLGV + I +NYP +A K APAL+AGN+
Sbjct: 135 DYIPLGGDF--------------AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNA 180
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
+V KP + AL + AG PKGL + + G + G L HP + +S TG
Sbjct: 181 MVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDR-DTGPLLVNHPDVAKVSLTGSVP 239
Query: 246 TGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
TG ++ A + + MELGGK I+ +DAD++ A + G F SGQ C+
Sbjct: 240 TGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVF 299
Query: 304 VMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAAT--- 359
V + +E +K + + +G P + + P+V+++ + + K + AT
Sbjct: 300 VQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLIT 359
Query: 360 ---FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG 416
EG + P + +V DM IA EE FGPV+ V+ + +E + NA+ FG
Sbjct: 360 GGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFG 419
Query: 417 LQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMM 476
L G VFT D+ +A + D +E GT+ IN+ + P PF G K SG G + ++
Sbjct: 420 LAGGVFTADLARAHRVVDGLEAGTLWINT-YNLCPVEIPFGGSKQSGFGRENSAAALEHY 478
Query: 477 TKIKSTVINLP 487
+++K+ ++
Sbjct: 479 SELKTVYVSTG 489
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 340 bits (875), Expect = e-112
Identities = 140/491 (28%), Positives = 227/491 (46%), Gaps = 24/491 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
F G + S SG++ ++P T + + EV++ + A A + W++T
Sbjct: 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAK 86
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+R L + A ++++ +A + + + +V R+ + ++ AE + E
Sbjct: 87 ERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAM-ED 145
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+ D R T ++P G V I P+N P+ L+ +IAPAL GN++VLKP
Sbjct: 146 RTFPVD------RDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
A + A P G+ + V G G E G L HP + ++ TG +TG + +
Sbjct: 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259
Query: 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
A + L ELGGK ++ DADL+ A +V FS++G+RCTA LV E + +
Sbjct: 260 NAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFE 319
Query: 311 TLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAAT---------- 359
V KV + + VG P D + ++ P++ + G V K++ A
Sbjct: 320 DFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKT 379
Query: 360 -FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 418
F E GN + P + M+IA EE FGPVL I EE + N + +GL
Sbjct: 380 SFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLA 438
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478
VFTRD+ +A ++ +E G V +NS R PF G+K SG +G T +++ T
Sbjct: 439 AYVFTRDLERAHRLALELEAGMVYLNSHNVRHL-PTPFGGVKGSGDRREGGTYALDFYTD 497
Query: 479 IKSTVINLPTP 489
+K+ + L P
Sbjct: 498 LKTIALPLRPP 508
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 339 bits (871), Expect = e-112
Identities = 126/462 (27%), Positives = 216/462 (46%), Gaps = 22/462 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWK 74
KF+ +G+W S+ + +I+P+T + + + + +K + AK A ++W T +
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHE 86
Query: 75 RAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSG-DLVSYCAEEGVRILGEG 133
R + K I +++ + +A+ + E+ P A+ +G + + +
Sbjct: 87 RLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQE 146
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
L+ + + +GVV I P+N+P+N K+ PAL+AG ++VLKP
Sbjct: 147 ALIEGNEQ--------AILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSE 198
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISK 252
++A+ A P G+ + + G G+ +G +L+ HP + ISFTG G ISK
Sbjct: 199 IAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK 258
Query: 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
A + + +ELGGK A II DAD+D A V+ F SGQ C A LV +++ D
Sbjct: 259 NASNTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYD 317
Query: 311 TLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ------E 363
++ K K VG I PVV++ + I+ L+ + AT
Sbjct: 318 KAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377
Query: 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT 423
G + P + +V+P MRI EE FGPVL ++ N+ +E + N + +GL + +
Sbjct: 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQS 437
Query: 424 RDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG 465
+D +K I+ + +G V++N F G+K SG
Sbjct: 438 QDRSKCRRIAAQVRSGMVEVNGHE-LPG-GSYFGGVKFSGRA 477
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 338 bits (870), Expect = e-111
Identities = 140/488 (28%), Positives = 236/488 (48%), Gaps = 24/488 (4%)
Query: 14 YKFFYDGVWRKSSSGKS-VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
++ G KS G + + P T + ++ C EEV++ V++A+ A W+K
Sbjct: 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAG 79
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+R+ ++ +AA I++E++ IA+ V K +A ++ + + Y A + G+
Sbjct: 80 IERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQ 139
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
L +F T + PLGV I +NYP +A K APAL GN++V KP
Sbjct: 140 HIQLPGGAF--------AYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
V + + FH AG P GL++ V G G+E G L HP++ +SFTG TG +
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250
Query: 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
+ + + + +ELGGK +I +D +L+ A + F GQ CT V +
Sbjct: 251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIM 310
Query: 310 DTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQ---------KAAT 359
+E+V + + VG P + + ++++ + + G V AK+ + T
Sbjct: 311 PQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370
Query: 360 FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+ G + P +LDN R DM EE FGPV+ V+ ++ EE + N + FGL
Sbjct: 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLAS 430
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
VFTRDI++A ++ +E GT IN+ S P PF G K SG G + +++ +++
Sbjct: 431 GVFTRDISRAHRVAANLEAGTCYINT-YSISPVEVPFGGYKMSGFGRENGQATVDYYSQL 489
Query: 480 KSTVINLP 487
K+ ++ +
Sbjct: 490 KTVIVEMG 497
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-111
Identities = 122/486 (25%), Positives = 205/486 (42%), Gaps = 23/486 (4%)
Query: 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
+ Y+G W G+ +T P +P RV+ + + + V+ A+ A K WA P
Sbjct: 23 ENEGVYNGSW--GGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPA 80
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
KR E++ + L+E+ + + E+ K + V EV D+ Y I G
Sbjct: 81 PKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGG- 139
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
P + P+G+V I FN+PV + A A+I GN + K
Sbjct: 140 ------PILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGA 193
Query: 193 TQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTG 247
++ ++ + P + S G G++IG + +N +SFTG G
Sbjct: 194 PTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVG 252
Query: 248 ISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVM 305
+ +ELGG +A I EDADL L + + +GQRCT + +
Sbjct: 253 KQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIH 312
Query: 306 ESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC--- 361
ES+ D +V ++K A++ VG P + + P+ T+ + + G V +AK++ T
Sbjct: 313 ESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG 372
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ R GN + P ++ + D IA E F P+L V + + EE N GL +
Sbjct: 373 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSI 432
Query: 422 FTRDINKAI--LISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
FT+D+ + L + G V +N S F G K +G G + +++ +
Sbjct: 433 FTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492
Query: 480 KSTVIN 485
+ IN
Sbjct: 493 STCTIN 498
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 336 bits (864), Expect = e-110
Identities = 148/489 (30%), Positives = 237/489 (48%), Gaps = 25/489 (5%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS---WAKT 70
K F + W S SGK + NP T + V+ +E+V+K V+ A+ A + W
Sbjct: 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80
Query: 71 PLWKRAELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGV 127
+R LL+K A +++ + +A E + K +A + ++ + YCA
Sbjct: 81 DASERGRLLNKLADLIERDRLLLATMEAM--NGGKLFSNAYLMDLGGCIKTLRYCAGWAD 138
Query: 128 RILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187
+I +G+ + D + T P+GV I P+N+P+ + + KI PAL GN++
Sbjct: 139 KI--QGRTIPMDG------NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 190
Query: 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246
V+KP Q + ALHM AGFP G+++ V G G G ++ H ++ ++FTG +
Sbjct: 191 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 250
Query: 247 GISISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
G I + AG + + +ELGGK CI+ DADLD A +G F + GQ C A
Sbjct: 251 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 310
Query: 304 VMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC- 361
V ES+ D V + + K +G P P + + I L+ K++ A
Sbjct: 311 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 370
Query: 362 --QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQG 419
+ +G I P + +V DMRIA EE FGPV +++ S+++ I N + +GL
Sbjct: 371 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 430
Query: 420 CVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479
+FT DI+KAI +S A+++GTV +N PF G K SG G + + T++
Sbjct: 431 GIFTNDIDKAITVSSALQSGTVWVNCYSVVSA-QCPFGGFKMSGNGRELGEYGFHEYTEV 489
Query: 480 KSTVINLPT 488
K+ I +
Sbjct: 490 KTVTIKISQ 498
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 334 bits (860), Expect = e-110
Identities = 126/447 (28%), Positives = 195/447 (43%), Gaps = 17/447 (3%)
Query: 26 SSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAI 85
+ +NP T + + +E+ + A K W T + +RA+ L
Sbjct: 4 MTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQA 63
Query: 86 LKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE 145
L+ +A+C+ +E+ KP K A EV +S L + AE G +L LV +
Sbjct: 64 LRAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPEPTLVEN------ 117
Query: 146 RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC 205
+ + PLGV+LAI P+N+P+ + P L+AGNS +LK A +
Sbjct: 118 --QQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARI 175
Query: 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAG--MIPLQME 262
AG P G+ V + + P I ++ TG G +I +AG + +E
Sbjct: 176 LAEAGTPAGVYGWVNANNEGVSQ-MINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLE 234
Query: 263 LGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK 322
LGG D I+L DADL+LA V G + +GQ C A K +V E +A ++ A A
Sbjct: 235 LGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAA 294
Query: 323 LTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF---CQEYKREGNLIWPLLLDN 378
L +G P ++ D+ P+ + + V + + A ++ EGN +L +
Sbjct: 295 LKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLAD 354
Query: 379 VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMET 438
V PDM +E FGPV + + N S FGL +FT D A ++ +E
Sbjct: 355 VTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLEC 414
Query: 439 GTVQINSAPSRGPDHFPFQGLKDSGIG 465
G V IN + F G+K SG G
Sbjct: 415 GGVFINGYSASDAR-VAFGGVKKSGFG 440
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 336 bits (863), Expect = e-110
Identities = 146/487 (29%), Positives = 219/487 (44%), Gaps = 22/487 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTP 71
Y+ F G + + K+ INPT +V +V+K V AK A W K
Sbjct: 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96
Query: 72 LWKRAELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVR 128
R LL++ A ++++ + +A E L + A+ V S Y A +
Sbjct: 97 ARDRGRLLYRLADVMEQHQEELATIEAL--DAGAVYTLALKTHVGMSIQTFRYFAGWCDK 154
Query: 129 ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
I G LT K P+GV + P+NYP+ + K A L AGN++V
Sbjct: 155 IQGA----TIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVV 210
Query: 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247
+KP + AL AG PKG+++ + G GS +G L+ HP + I FTG + G
Sbjct: 211 IKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVG 270
Query: 248 ISISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
I K + + +ELGGK II D DL+ A + F G+ C A V
Sbjct: 271 KHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFV 330
Query: 305 MESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC-- 361
ES+ + V+KV +V K+ +G P + D + P E+ + ++ AT
Sbjct: 331 EESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCG 390
Query: 362 -QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR--INSVEEGIHHCNASNFGLQ 418
+ R G P + +V M IA EE FGP++ + R V+ + NA+ FGL
Sbjct: 391 GNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLA 450
Query: 419 GCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478
VFTRDINKA+ +SD ++ GTV IN+ ++ PF G K SG G ++N +
Sbjct: 451 SGVFTRDINKALYVSDKLQAGTVFINT-YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 479 IKSTVIN 485
IK+
Sbjct: 510 IKTVTFE 516
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 139/488 (28%), Positives = 229/488 (46%), Gaps = 25/488 (5%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKS---WAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 72 LWKRAELLHKAAAILKEQKAPIA--ECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVR 128
R LL++ A +++ + +A E L + KP + + ++ + Y A +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETL--DNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 129 ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIV 188
GK + D + T P+GV I P+N+P+ + K+ PAL GN +V
Sbjct: 139 Y--HGKTIPIDG------DFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 190
Query: 189 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247
+K Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 191 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 248 ISISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALV 304
I AG + + +ELGGK II+ DAD+D A F GQ A V
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFV 310
Query: 305 MESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-- 361
E + D VE+ A+ VG P + + P V E+ I G + KQ+ A
Sbjct: 311 QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCG 370
Query: 362 -QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL
Sbjct: 371 GGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480
VFT+D++KA +S A++ GTV +N PF G K SG G + + T++K
Sbjct: 431 VFTKDLDKANYLSQALQAGTVWVNCY-DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 481 STVINLPT 488
+ + +P
Sbjct: 490 TVTVKVPQ 497
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 330 bits (849), Expect = e-109
Identities = 119/441 (26%), Positives = 194/441 (43%), Gaps = 17/441 (3%)
Query: 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91
+NP T + T +++++ + A K W RAE+LH A LKE +
Sbjct: 7 QSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHED 66
Query: 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCL 151
+A+ + E+ K ++ EV + +Y A+ G +L KL
Sbjct: 67 ELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDL--------GNAY 118
Query: 152 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211
K GV++A P+N+P+ + AP I GN I+LK +A AG
Sbjct: 119 YLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGA 178
Query: 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTG-GDTGISISKKAG--MIPLQMELGGKDA 268
P+G + + ++ D + P I ++ TG G ++++ AG + MELGG DA
Sbjct: 179 PEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237
Query: 269 CIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328
I+L+DAD + + GQ CT+ K +V +S D ++ ++K + L G P
Sbjct: 238 FIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297
Query: 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATF---CQEYKREGNLIWPLLLDNVRPDMR 384
E D + P+ +E + +E V +A A E +G P +L ++ D
Sbjct: 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNP 357
Query: 385 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN 444
+ +E FGP+ V + I N S++GL V DI++A +S +ETG IN
Sbjct: 358 VFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVIN 417
Query: 445 SAPSRGPDHFPFQGLKDSGIG 465
+ PF G+K SG G
Sbjct: 418 GRWITSGE-LPFGGIKKSGYG 437
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 329 bits (845), Expect = e-108
Identities = 144/467 (30%), Positives = 221/467 (47%), Gaps = 27/467 (5%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F G + S+ ++ I++P+T K + A + + +E A+ AQK+WAK R
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ 75
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L A ++E K +A LV E K A EV + + Y + + I G
Sbjct: 76 NMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEG----- 130
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D P + + + K+P GVV+ I +N+P+ LA KI PALI GN++VLKP +
Sbjct: 131 --DILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETP 188
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA- 254
+A + AG P G+++ + G GS +G L P I+ TG G I K +
Sbjct: 189 LATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248
Query: 255 -GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
M P+ +ELGGK ++++DADLD AA + + G F+ GQ CT V+ V SV D +
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-------QEYK 365
K V L VG P + D + P + + I+ +V +A ++ AT E
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
G P +L +V+ D + EE FGP+LP+++++S+E+ I CN S +GL V T+
Sbjct: 369 EGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS 428
Query: 426 INKAILISDAMETGTVQIN----SAPSRGPDHFPFQGLKDSGIGSQG 468
+E G V IN G K SG G +
Sbjct: 429 FANINQAISDLEVGEVYINRGMGEQHQG-----FHNGWKQSGFGGED 470
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 328 bits (843), Expect = e-107
Identities = 159/489 (32%), Positives = 227/489 (46%), Gaps = 31/489 (6%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA--QKSWAKTP 71
K F G W K S+ + + P T + +V +V+ V A+ A W TP
Sbjct: 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTP 68
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRIL 130
+RA ++ A +L E+K + L E +P + S ++Y A
Sbjct: 69 PHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAG------ 122
Query: 131 GEGKLLVSDSFPGNER----TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNS 186
+D E + S+ P+GVV AI +N P+ LAV+KIAPAL+AG +
Sbjct: 123 ------AADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCT 176
Query: 187 IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-D 245
IVLKP + + A + F G P+G++S V G G E G LT +P I+ +FTG
Sbjct: 177 IVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSA 235
Query: 246 TGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
G + ++A + P +ELGGK A IILED DL A +V G +GQ C L
Sbjct: 236 VGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL 295
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ 362
S D +V V V L VG P D I P+++E +EG + ++ A
Sbjct: 296 APRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVC 355
Query: 363 EYKREGNL-----IWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417
R L I P + +V M IA EE FGPVL +I ++ E+ I N S +GL
Sbjct: 356 GGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGL 415
Query: 418 QGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMT 477
G V+T D+ K I IS + TGT IN P PF G K+SGIG + + T
Sbjct: 416 AGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPG-SPFGGYKNSGIGRENGPEGVEHFT 473
Query: 478 KIKSTVINL 486
+ KS ++ +
Sbjct: 474 QQKSVLLPM 482
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 338 bits (868), Expect = e-106
Identities = 127/453 (28%), Positives = 205/453 (45%), Gaps = 22/453 (4%)
Query: 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104
+ T ++ + V A+ W++TP RA L +AA +L+ + A L +E K
Sbjct: 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKT 603
Query: 105 AKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164
DA++E+ + D Y A +G ++ G + P E + GV +AI
Sbjct: 604 LDDALSELREAADFCRYYAAQGRKLFGSETAMPG---PTGESNAL---TMRGRGVFVAIS 657
Query: 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGS 224
P+N+P+ + + ++ AL+AGNS+V KP Q A V H AG PK + VTG G
Sbjct: 658 PWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG- 716
Query: 225 EIGDFLTMHPSINCISFTGGD-TGISISKKAG-----MIPLQMELGGKDACIILEDADLD 278
IG LT HP I + FTG SI++ ++PL E GG +A I A +
Sbjct: 717 RIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPE 776
Query: 279 LAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPV 337
A ++V F +GQRC+A+++ V E VAD ++E V +L +G P D + PV
Sbjct: 777 QVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPV 836
Query: 338 VTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397
+ + ++ + K +A EG + P + + EE FGP+L V
Sbjct: 837 IDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEA--GQLTEEVFGPILHV 894
Query: 398 IR--INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG--PDH 453
+R ++E + + +GL V +R + I D ++ G + +N G
Sbjct: 895 VRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNR-NMIGAVVGV 953
Query: 454 FPFQGLKDSGIGSQ-GITNSINMMTKIKSTVIN 485
PF G SG G + G + + ++ IN
Sbjct: 954 QPFGGNGLSGTGPKAGGPHYLARFATEQTVTIN 986
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 322 bits (828), Expect = e-105
Identities = 140/481 (29%), Positives = 219/481 (45%), Gaps = 19/481 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+K +G S G+ + NP T + + E+V+ V A A W +T
Sbjct: 24 HKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 82
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
RAE L K A +++E AE + KP A E+ D+ + A + G
Sbjct: 83 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 142
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ + + PLGVV +I P+NYP+ +A K+APAL AGN +VLKP
Sbjct: 143 -------AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 195
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
+ AL + FP G+++ + G+G +GD LT HP + +S TG TG I
Sbjct: 196 EITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254
Query: 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
+ MELGGK I+ +DAD++ + G+ +GQ CTA + +
Sbjct: 255 SHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314
Query: 310 DTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQ----KAATFCQEY 364
DTLVEK+ A VA L GAP+D ++ P+ + + + V +AK K T ++
Sbjct: 315 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKR 374
Query: 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
K G P LL D I +E FGPV+ V ++ E+ ++ N S +GL V+T+
Sbjct: 375 KGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK 434
Query: 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
D+ +A +S ++ G +N+ P G K SG G + T ++ ++
Sbjct: 435 DVGRAHRVSARLQYGCTWVNT-HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493
Query: 485 N 485
Sbjct: 494 K 494
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 321 bits (826), Expect = e-105
Identities = 116/482 (24%), Positives = 210/482 (43%), Gaps = 19/482 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+ + + + I+NP T + + +++ V+ A+ A W++T
Sbjct: 26 TQLLIGSRFE-AGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPA 84
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGE 132
+R+ L K A ++++ A KP E+ D + A +
Sbjct: 85 ERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP 144
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ PG + + P+G+V +I P+NYP+ + K+APA+ GN++V KP
Sbjct: 145 ---AAGEYLPG----HTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPS 197
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
Q + AL + P+G+++ +TG+G +G+ L HP + +S TG TG +
Sbjct: 198 EQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256
Query: 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVA 309
A + +ELGGK I+ DADL+ I G+ +GQ CTA +
Sbjct: 257 AAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY 316
Query: 310 DTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAK-QKAATFC---QEY 364
+ LV + + V+ + +D + +I P+++ + + V A QK +
Sbjct: 317 EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG 376
Query: 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR 424
EG P ++ + I E FGPV+ V R ++ + N S++GL V+T+
Sbjct: 377 SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTK 436
Query: 425 DINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484
DI+KA+ + ++ G IN+ + P G+K SG G ++ T ++ +I
Sbjct: 437 DISKAMRAASRLQYGCTWINT-HFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMI 495
Query: 485 NL 486
N
Sbjct: 496 NH 497
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-102
Identities = 133/464 (28%), Positives = 207/464 (44%), Gaps = 24/464 (5%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G W+ S+ G + + NP T +V + +E+V VE + A + P+ R
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+ L LKE + I L E KP K+A EV + YCA+ +
Sbjct: 75 KWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS----- 129
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
+ P + P+GV I P+N+P+ + K++ AL AG V+KP ++
Sbjct: 130 --HTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETP 187
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA- 254
+ + P G+++ V GK S IG L H + +SFTG + G +
Sbjct: 188 LTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA 247
Query: 255 -GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ L +ELGG I+ +DADL+ AA N++ F GQ C V E VAD
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR----EG 368
+K+ +V K+TVG D DI P++ + + ++ + DA K A+ + +G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367
Query: 369 NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428
P ++ V +M EE FGP++P+ + EE I N + FGL VFT D +
Sbjct: 368 LFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAER 427
Query: 429 AILISDAMETGTVQIN----SAPSRGPDHFPFQGLKDSGIGSQG 468
A ++ + G V N P PF G+K SGIG +G
Sbjct: 428 AQRVAAGLRFGHVGWNTGTGPTPEA-----PFGGMKASGIGREG 466
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 137/461 (29%), Positives = 219/461 (47%), Gaps = 21/461 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+G W ++ G ++ + NP V + + + + ++ + A WA +RA
Sbjct: 36 LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA 95
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L K ++ IA + E KP +A EV+ + + + AEE R+ G
Sbjct: 96 GILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYG----- 150
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D+ P + + + P+GV AI P+N+P + K APAL AG +++++P
Sbjct: 151 --DTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTP 208
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
+ AL + AG P G++ VTGK EIG LT + ++ +SFTG + G + +
Sbjct: 209 LTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268
Query: 256 --MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ + +ELGG I+ +DADLD A + + +GQ C V V D
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372
EK+ AKV +L VG E I P++ E + ++ + DA K A K G L +
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFF 388
Query: 373 -PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431
P +L V DM +A EE FGP+ P+ ++ EE I N + FGL +T + ++AI
Sbjct: 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIR 448
Query: 432 ISDAMETGTVQIN----SAPSRGPDHFPFQGLKDSGIGSQG 468
+S+A+E G V N S PF G+K SG+G +G
Sbjct: 449 VSEALEYGMVGHNTGLISNEVA-----PFGGVKQSGLGREG 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 312 bits (801), Expect = e-101
Identities = 135/460 (29%), Positives = 225/460 (48%), Gaps = 17/460 (3%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+G W +++G+++ + NP V +E ++ A A +W +RA
Sbjct: 13 LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA 72
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L ++ E + +A + E KP +A E+ + + + AEEG RI G
Sbjct: 73 TILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYG----- 127
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D+ PG++ K + K P+GV AI P+N+P + K PAL AG ++VLKP +Q
Sbjct: 128 --DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTP 185
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
+AL + AG P G+ + VTG +G+ LT +P + +SFTG + G + ++
Sbjct: 186 FSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245
Query: 256 --MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ + +ELGG I+ +DADLD A + F +GQ C V + V D
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GN 369
EK++ ++KL +G ++ I P++ E + +E + DA +K A K GN
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
P +L +V + +++ EE FGP+ P+ R + I N + FGL + RD+++
Sbjct: 366 FFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRV 425
Query: 430 ILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQG 468
+ +A+E G V IN+ S PF G+K SG+G +G
Sbjct: 426 FRVGEALEYGIVGINTGIISNEV--APFGGIKASGLGREG 463
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 312 bits (802), Expect = e-101
Identities = 144/460 (31%), Positives = 222/460 (48%), Gaps = 17/460 (3%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ G W+ + S + + +P T + V E + +E A+ A W +RA
Sbjct: 16 YIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA 75
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L + ++ +A L E KP +A E+ + + + AEEG R+ G
Sbjct: 76 AILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAG----- 130
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D+ P + K + K P+GV AI P+N+P + K+ PAL AG IV+KP
Sbjct: 131 --DTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTP 188
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255
+AL M AG PKG++S V G IG +T +P + +SFTG G + ++
Sbjct: 189 FSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248
Query: 256 --MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLV 313
+ L +ELGG I+ +DADLD A + + +GQ C V E V D
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 314 EKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE---GN 369
+K+ A V+KL VG E + P++ E++ +E + DA K A+ KR
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429
P +L V+PDM +A EE FGP+ P+ R S EE + N + FGL +++RDI +
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 430 ILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQG 468
+++A+E G V IN+ S PF G+K SG+G +G
Sbjct: 429 WRVAEALEYGMVGINTGLISNEV--APFGGVKQSGLGREG 466
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 311 bits (800), Expect = e-101
Identities = 94/495 (18%), Positives = 169/495 (34%), Gaps = 46/495 (9%)
Query: 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
+ K G W + +G +T+ +P T RV + + + +
Sbjct: 7 LLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTY 65
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
+RA L +L+ ++ D+ ++ +SY A+ G +
Sbjct: 66 AQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEV 125
Query: 133 GKLLVSD--SFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
L S + GV L I FN+P K APAL++G +++K
Sbjct: 126 HALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVK 185
Query: 191 PPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248
P T A MV AG P G +S + G L S + +SFTG DT
Sbjct: 186 PATATAWLTQRMVADVVDAGILPPGALSIICGSS---AGLLDQIRSFDVVSFTGSADTAA 242
Query: 249 SISKKAG----MIPLQMELGGKDACIILEDAD-----LDLAAANIVKGGFSYSGQRCTAV 299
++ L ++ ++ I+ DA DL +V+ SGQ+CTA+
Sbjct: 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAI 302
Query: 300 KVALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAA 358
+ A V E+ + ++E +KAK+AK+TVG P + + +V+ + + +++A
Sbjct: 303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAV 362
Query: 359 T--------FCQEYKREGNLIWPLLL--DNVRPDMRIAWEEPFGPVLPVIR--------I 400
+ P L ++ + E FGPV V
Sbjct: 363 LAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422
Query: 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQIN---------SAPSRGP 451
+ L +++ D ++ + +++
Sbjct: 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
Query: 452 D-HFPFQGLKDSGIG 465
G +G G
Sbjct: 483 MPMSLHGGPGRAGGG 497
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 5e-95
Identities = 135/464 (29%), Positives = 210/464 (45%), Gaps = 23/464 (4%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F G W + + + +P + V C E V A A W + +R+
Sbjct: 16 FVGGRWL--PAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS 73
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
LL K ++ + K +A + E KP K+A E++ S + + +EE R+ G
Sbjct: 74 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYG----- 128
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
D + + L K P+GV I P+N+P + K+ AL AG ++V+KP
Sbjct: 129 --DIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 197 VAALHMVHCFHLAGFPKGLISCVT---GKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
+AL + AG P G+ + + E+G+ + P ++ ISFTG TG +
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 253 KAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
A + + MELGG I+ + A++D A A + F +GQ C LV + D
Sbjct: 247 HAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 311 TLVEKVKAKVAK-LTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE- 367
V+ + K L VG E+ P++ E + +E V DA K AT KR
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 368 --GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
N P LL NV DM EE FGP+ PVI+ ++ EE I NA++ GL G +++D
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD 426
Query: 426 INKAILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQG 468
+ +++ +E G V +N S PF G+K SG+G +G
Sbjct: 427 PAQIWRVAEQLEVGMVGVNEGLISSVE--CPFGGVKQSGLGREG 468
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 288 bits (740), Expect = 2e-92
Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 36/484 (7%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
+ +G W +S + + ++NP T++ +V T+E+++ +TA A K+W+K + +RA
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+L +L + K +A + E K K+A+ EV R + V + A ++G+
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 137 VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGA 196
++ E + P+GVV I PFN+P+ + A+ GN+ +LKP +
Sbjct: 129 IA---TDVE----AANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTP 181
Query: 197 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD--------TGI 248
+ +V F AG PKG+ + V G ++ + + HP I ISF G G
Sbjct: 182 LLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240
Query: 249 SISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV 308
K+ Q G K+ I+L DA+L+ NIV F +G+RC A V V E +
Sbjct: 241 ENLKRV-----QSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI 295
Query: 309 ADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC-----Q 362
AD + K++ KVA + +G D + PV+ E + + ++ A
Sbjct: 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN 355
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
+G + P + DNV +M I +E F PVL VIR+ +++E I N S F C+F
Sbjct: 356 VSD-DGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLF 414
Query: 423 TRDINKAILISDAMETGTVQIN---SAPSRGPDHFPFQGLKDSGIGSQGI--TNSINMMT 477
T + N + ++ G + IN AP FPF G K S G+ +S++ T
Sbjct: 415 TSNSNAIRYFRENIDAGMLGINLGVPAPM---AFFPFSGWKSSFFGTLHANGKDSVDFYT 471
Query: 478 KIKS 481
+ K
Sbjct: 472 RKKV 475
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 282 bits (723), Expect = 1e-89
Identities = 140/490 (28%), Positives = 214/490 (43%), Gaps = 44/490 (8%)
Query: 17 FYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRA 76
F DG +SG+ I NP T + V + ++ VE+AK AQ WA T +RA
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 77 ELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL 136
+ K +L + +AE L +E K DA ++VR ++ + E
Sbjct: 90 RVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 137 VS---DSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
D + + + P+G+ I PFN+P + + APA+ GN+ +LKP
Sbjct: 150 AGPGIDMY----------SIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSE 199
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGD-------- 245
+ + + AG P G+++ V G D + HP I +SF G
Sbjct: 200 RDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYG 258
Query: 246 TGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVA-LV 304
T K+A Q G K+ II+ DADLD AA ++ G+ +G+RC A+ VA V
Sbjct: 259 TAAMNGKRA-----QCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPV 313
Query: 305 MESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAAT---- 359
E A+ L++K+ V L +G D D+ PVVT+ + I L+ ++ A
Sbjct: 314 GEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVD 373
Query: 360 ---FCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFG 416
F + G+ I L D+V PDM I E FGPVL V+R + EE + +G
Sbjct: 374 GRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYG 433
Query: 417 LQGCVFTRDINKAILISDAMETGTVQIN---SAPSRGPDHFPFQGLKDSGIGSQGI--TN 471
++TRD + A + + G V +N P + F G K S G T+
Sbjct: 434 NGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPL---AYHSFGGWKSSSFGDLNQHGTD 490
Query: 472 SINMMTKIKS 481
SI T+ K+
Sbjct: 491 SIKFWTRTKT 500
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 265 bits (679), Expect = 9e-84
Identities = 69/410 (16%), Positives = 136/410 (33%), Gaps = 21/410 (5%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108
+ +EV ++E+A AQK A + ++ A + +A+ +E
Sbjct: 10 SIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 109 VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168
+ ++ + K + + + K + +PLGVV + P
Sbjct: 70 KVIKNV------FASKH---VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTN 120
Query: 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH----LAGFPKGLISCVTGKGS 224
P + + K ++ AGNSIV P A L V AG PKG ISC+T
Sbjct: 121 PTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTI 180
Query: 225 EIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANI 284
+ D L H I TGG + + + + P G I A++ A +I
Sbjct: 181 QGTDQLMKHKDTAVILATGG-SAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHI 239
Query: 285 VKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSAN 344
+ +G C + + +V + ++ + + + A + + + + +
Sbjct: 240 LDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSD--AEAVQLGKFILRPNGS 297
Query: 345 FIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 404
+V + Q A + V + + E+ P+L + +
Sbjct: 298 MNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGAKIPYSREK-LAPILAFYTAETWQ 356
Query: 405 EGIHHCNAS----NFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG 450
E G + + D + + +N+ + G
Sbjct: 357 EACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALG 406
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 264 bits (677), Expect = 8e-83
Identities = 89/492 (18%), Positives = 152/492 (30%), Gaps = 40/492 (8%)
Query: 25 SSSGKSVTIINPTTRKP-HFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAA 83
+ N T + T+ EVN+ A + + + KRA LL A
Sbjct: 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIA 62
Query: 84 AILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLL---VSDS 140
+ L+ + I E A P E+ R+ + + A+ +L
Sbjct: 63 SELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTR 122
Query: 141 FPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVS--KIAPALIAGNSIVLKPPTQGAVA 198
P + +I LG V N+P+ + + A AL AG +++K T
Sbjct: 123 APLPKPDIR--RQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 199 ALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253
+ + C A P+ + + + G +G L HP I + FTG G ++
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 254 AG----MIPLQMELGGKDACIILEDADLDLA--AANIVKGGFSYSGQRCTAVKVALVMES 307
A IP ELG + I A A A V GQ CT V + +
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 308 VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE 367
+ L +TP + ++ +V
Sbjct: 301 PET---QAFIETAQSLIRQQSP-STLLTPGI---RDSYQSQVVSRGSDDGIDVTFSQAES 353
Query: 368 GNLIWPLLLD--NVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR- 424
+ L + EE FGP ++ +V + + L +
Sbjct: 354 PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATE 413
Query: 425 -DINKAILISDAMET--GTVQINSAPSRGPDHF------PFQGLKDSGIGSQGITNSINM 475
D + + +E G + N P+ + P+ S S G +I+
Sbjct: 414 EDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVG-AEAIHR 472
Query: 476 MTKIKSTVINLP 487
+ + LP
Sbjct: 473 WLRPVA-YQALP 483
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 1e-80
Identities = 97/426 (22%), Positives = 175/426 (41%), Gaps = 41/426 (9%)
Query: 27 SGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAI 85
+ ++P + + +N+ ++ A A+K W P+ RA++ KAA +
Sbjct: 75 TSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADM 134
Query: 86 LKEQ-KAPIAECLVKEIAKPAK----DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDS 140
L +A + + K DA E++ D + A+ V + GE +
Sbjct: 135 LSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI---DFFRFNAKFAVELEGEQPI---SV 188
Query: 141 FPGNERTKYCLTSKIPLGVVLAIPPFNYP---VNLAVSKIAPALIAGNSIVLKPPTQGAV 197
P T Y + G V AI PFN+ NLA + + GN ++ KP +
Sbjct: 189 PPSTNHTVY----RGLEGFVAAISPFNFTAIGGNLAGA----PALMGNVVLWKPSDTAML 240
Query: 198 AALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG- 255
A+ + AG P +I V G GD +T + I+FTG T + ++
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 256 -------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV 308
L E GGK+ + AD+D + ++ F Y GQ+C+A V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 309 ADTLVEKVKAKVAKLTVGAPEDD--CDITPVVTESSANFIEGLVMDAKQKAATFCQ---- 362
+ ++ + +++ VG P +D + V+ + I+ + A+ +
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI--NSVEEGIHHCNA-SNFGLQG 419
+ G + P ++++ P I EE FGPVL V + E + ++ +++GL G
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480
Query: 420 CVFTRD 425
VF +D
Sbjct: 481 AVFAQD 486
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 254 bits (651), Expect = 1e-79
Identities = 75/417 (17%), Positives = 149/417 (35%), Gaps = 24/417 (5%)
Query: 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKP 104
+ E++ ++ K AQ+ +A + ++ A+ + + P+A+ V+E
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 105 AKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164
+ Y + + G ++ +T P+G++ I
Sbjct: 61 IVEDKVIKNHFASEFIYNKYKDEQTCGI--------LEEDDNLG-TMTIAEPVGIICGIV 111
Query: 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH----LAGFPKGLISCVT 220
P P + A+ K +L N I+ P + + AG PK +I +
Sbjct: 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWID 171
Query: 221 GKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLA 280
E+ + L H I I TGG G+ + + P G +I E AD+ A
Sbjct: 172 QPSVELSNALMKHDDIALILATGG-PGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRA 230
Query: 281 AANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTE 340
A+++ +G C + + +V++ V D + E+ + A + D ++
Sbjct: 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDG 290
Query: 341 SSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400
+ I G A + A + + ++ L V D A E+ P L + R
Sbjct: 291 ALNAKIVGQPATAIAEMAGV--KVPADTKVLIGEGLGKVSYDDAFAHEK-LSPTLGMFRA 347
Query: 401 NSVEEGIHHC----NASNFGLQGCVFTRD---INKAILISDAMETGTVQINSAPSRG 450
++ E+ + G ++T ++ D M+T + IN + G
Sbjct: 348 DNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHG 404
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 253 bits (647), Expect = 3e-78
Identities = 101/486 (20%), Positives = 166/486 (34%), Gaps = 47/486 (9%)
Query: 15 KFFYDGVWRKSS-SGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
K G W + + S P T E VN+ E A+ A ++ +
Sbjct: 31 KHLVAGEWLDGAGTFASAPAHGPAHDFA-----VGTVELVNRACEAAEEAFWTYGYSSRK 85
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA L A ++ + I E +E P E R+ + A+ +
Sbjct: 86 ERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLD 145
Query: 134 KLL---VSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV--NLAVSKIAPALIAGNSIV 188
+ + + + P + + P+G V N+P+ + A A AL AG +V
Sbjct: 146 RRVDAAMPERQPAPRQEIR--LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVV 203
Query: 189 LKP----PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244
+K P G + A + G G+ S + G ++G L HP I + FTG
Sbjct: 204 VKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGS 263
Query: 245 -DTGISISKKAG----MIPLQMELGGKDACIILEDADLDLA---AANIVKGGFSYSGQRC 296
G ++ IP ELG + +L +A A +GQ C
Sbjct: 264 LAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFC 323
Query: 297 TAVKVALVMESV-ADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQ 355
T +A+V+E AD +AK+ +T + ++ + +G A +
Sbjct: 324 TNPGIAVVIEGADADRFTTAAVEALAKVAPQTM-----LTDGIAKA---YRDGQARFATR 375
Query: 356 KAATFCQEYKREGNLIWPLLLDNVRPDM---RIAWEEPFGPVLPVIRINSVEEGIHHCNA 412
A + G P L + EE FGP+ V+R+ S E
Sbjct: 376 NAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARG 435
Query: 413 SNFGLQGCVFT--RDINKAILISDAME--TGTVQINSAP-----SRGPDHF-PFQGLKDS 462
L + D+ A + +E G V +N P H P+ +
Sbjct: 436 FQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495
Query: 463 GIGSQG 468
G S G
Sbjct: 496 GATSVG 501
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 2e-47
Identities = 114/438 (26%), Positives = 182/438 (41%), Gaps = 49/438 (11%)
Query: 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-V 109
++++ V+ A+ A S PL R + L +++EQ+ + L ++ K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 110 TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKI---PLGVVLAIPPF 166
EV Y EE ++ + +D I PLGVVL I +
Sbjct: 78 EEV-------VYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW 130
Query: 167 NYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAALHMVHCFHLAGFPKGLISCVTGK 222
NYP NL + + A+ AGN++VLKP ++ A ++ + K L + G
Sbjct: 131 NYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLA-TIIPQY----LDKDLYPVINGG 185
Query: 223 GSEIGDFLTM---HPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKDACIILEDAD 276
E + L H I +TG G I A + P+ +ELGGK C + ++ D
Sbjct: 186 VPETTELLKERFDH-----ILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCD 240
Query: 277 LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITP 336
LD+A I G F SGQ C A L S+ + +VEK+K + + + D
Sbjct: 241 LDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGR 300
Query: 337 VVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLP 396
+++ + GL+ K + I P +L +V P + EE FGPVLP
Sbjct: 301 IISARHFQRVMGLIEGQK---VAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLP 357
Query: 397 VIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPD---H 453
++ + S+EE I N L +F+ + + +G V N D H
Sbjct: 358 IVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN-------DVIVH 410
Query: 454 F-----PFQGLKDSGIGS 466
PF G+ +SG+GS
Sbjct: 411 ITLHSLPFGGVGNSGMGS 428
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 3e-45
Identities = 103/448 (22%), Positives = 174/448 (38%), Gaps = 66/448 (14%)
Query: 49 TQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108
+ +++ + K + A + R + L + + K + L +++ KP
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 109 -VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDS--------FPGNERTKYCLTSKIPLGV 159
+ E+ E L V+ P P GV
Sbjct: 86 DLAEI-------GAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQ-----EPYGV 133
Query: 160 VLAIPPFNYPVNLAVSKIAPALIAGNSIVLKP----PTQGAVAAL--HMVHCFHLAGFPK 213
I PFNYPVNL ++ + A+I GN+ ++KP P +A+ ++ F
Sbjct: 134 TYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTP---ETSAVIEKIIAEA----FAP 186
Query: 214 GLISCVTGKGSEIGDFLTM---HPSINCISFTGGDT-GISISKKAG--MIPLQMELGGKD 267
++ + G E L++ I FTG G + + A + P+ +ELGGK
Sbjct: 187 EYVAVIQGGRDENSHLLSLPFDF-----IFFTGSPNVGKVVMQAAAKHLTPVVLELGGKC 241
Query: 268 ACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327
I+L DADLD ++ G F SGQ A V SV D L+E++ +V
Sbjct: 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTE---- 297
Query: 328 PEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAW 387
+ +VTE + L+ + + + + ++D V + +
Sbjct: 298 LPEINSTGKLVTERQVQRLVSLLEATQGQVL-VGSQADVSKRALSATVVDGVEWNDPLMS 356
Query: 388 EEPFGPVLPVIRINSVEEGIHHCNASNFG-LQGCVFTRDINKAILISDAMETGTVQINSA 446
EE FGP+LPV+ +SV I N + L VF +D++ A I + +++G Q+N
Sbjct: 357 EELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVN-- 414
Query: 447 PSRGPD---HF-----PFQGLKDSGIGS 466
H PF G+ SG+G
Sbjct: 415 -----GVMLHAFSPYLPFGGIGASGMGE 437
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 61/247 (24%)
Query: 281 AANIV---KGGFSYSGQRCTAVKVALVMESVADTLVEKVKA-KVAKLTVG---APEDD-- 331
A N++ G G K + ++ V+ K+ L + +PE
Sbjct: 150 AKNVLIDGVLGS---G------KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200
Query: 332 -----C-DITPVVT---ESSANFIEGLVMDAKQKAATFCQE--YKREGNLIWPLLLDNVR 380
I P T + S+N I+ + + + + Y+ L L+L NV+
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSN-IKLRIHSIQAELRRLLKSKPYEN--CL---LVLLNVQ 254
Query: 381 PDMRIAWEEPFG---PVLPVIRINSVEEGIHHCNASNFGL--QGCVFTRDINKAILISDA 435
+ + F +L R V + + ++ L T D K++L
Sbjct: 255 -NAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKY 310
Query: 436 METGTVQINSAPSRGPDHFPFQGLKDSGIG---SQGIT--------NSINMMTKIKSTVI 484
++ + P P + S I G+ N + T I+S++
Sbjct: 311 LD---CRPQDLPREVLTTNP---RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 485 NLPTPSY 491
L Y
Sbjct: 365 VLEPAEY 371
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.61 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.19 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-109 Score=859.67 Aligned_cols=472 Identities=32% Similarity=0.523 Sum_probs=444.1
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|++++++|+|||+.+++. |+..+++.++|++..++++.+...+. ..+...+++++|+|||++|+|||||+.
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~--------~~~~~~~~~~~P~GVv~~I~PwNfP~~ 157 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL--------RETSFVYTRREPLGVVAGIGAWNYPVQ 157 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE--------ETTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc--------cCCcceeEEecceeEEEEeccccCcch
Confidence 999999999999999986 69999999999999887766554321 124677899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+|||| .+|+.+
T Consensus 158 ~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i 237 (490)
T 2wme_A 158 IALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988899999999999999999999 999887
Q ss_pred HHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 251 SKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 251 ~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
.+.+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 238 ~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGd 317 (490)
T 2wme_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCC
Confidence 6533 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-------CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
| ++++++||++++.+++++.++|++++++|+++..|+. .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 397 (490)
T 2wme_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEE
Confidence 9 8899999999999999999999999999999954332 3689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++||+.
T Consensus 398 ~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~-~~~PFGG~k~SG~Gre~G~~gl~~ft~~ 476 (490)
T 2wme_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESP-AEMPVGGYKQSGVGRENGLTTLAHYTRI 476 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCC-TTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred eCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCC-CCCCcccccccccCchhHHHHHHHhhce
Confidence 999999999999999999999999999999999999999999999876544 4599999999999999999999999999
Q ss_pred eEEEEecCCCCCCC
Q 011080 480 KSTVINLPTPSYTV 493 (494)
Q Consensus 480 k~i~~~~~~~~~~~ 493 (494)
|+|+++++...++|
T Consensus 477 K~v~i~~g~~~s~F 490 (490)
T 2wme_A 477 KSVQVELGDYASVF 490 (490)
T ss_dssp EEEEEECSCCCCCC
T ss_pred eEEEEECCCCCCCC
Confidence 99999998877665
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-103 Score=824.72 Aligned_cols=476 Identities=51% Similarity=0.825 Sum_probs=444.8
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
...++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999987777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||..+++.|+..+++.++++++.+.++.+..... ...+....+...++.++|+|||++|+|||||+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKG--DQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEG--GGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc--cccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 999999999999999999999999999999999888776543221 111111113567889999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+||.|+|||| .+|+.+
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999999999 999999
Q ss_pred HHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCC
Q 011080 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED 330 (494)
Q Consensus 251 ~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~ 330 (494)
.+.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+
T Consensus 248 ~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 327 (505)
T 3prl_A 248 SEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPED 327 (505)
T ss_dssp HHHCCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTT
T ss_pred HHHccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCC
Confidence 99888999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 410 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 410 (494)
++++||++++.+++++.+++++++++|+++..|+...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 328 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~a 407 (505)
T 3prl_A 328 DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLS 407 (505)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHH
Confidence 88999999999999999999999999999976655679999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecCCC
Q 011080 411 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTP 489 (494)
Q Consensus 411 n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~~~ 489 (494)
|+++|||+++|||+|.++++++++++++|+|+||+++......+||||+|+||+|+++|.+|+++|++.|+|+++++.+
T Consensus 408 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~~~ 486 (505)
T 3prl_A 408 NQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAEN 486 (505)
T ss_dssp HTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC---
T ss_pred hCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCCCc
Confidence 9999999999999999999999999999999999987644566999999999999999999999999999999987543
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-103 Score=825.46 Aligned_cols=469 Identities=31% Similarity=0.487 Sum_probs=442.5
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHh--HHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQ--KSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 5678999999987778899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.+++++..++++.+.... ....+...++.++|+|||++|+|||||+
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~-------~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 184 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMID-------SPIPDTESKIVKEPVGVVTQITPWNYPL 184 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEC-------CSSTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecc-------cCCCCCcccccccCccEEEEECCCccHH
Confidence 999999999999999999999999999999999988776554221 1112467889999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+|||| .+|+.
T Consensus 185 ~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~ 264 (520)
T 3ed6_A 185 LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKH 264 (520)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 265 i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~ 344 (520)
T 3ed6_A 265 IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGN 344 (520)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99876 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
| ++++++||++++.+++++.++|++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 345 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 424 (520)
T 3ed6_A 345 GFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424 (520)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEE
Confidence 9 889999999999999999999999999999995 4432 3689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++... ..+||||+|+||+|+++|.+|+++||+.
T Consensus 425 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~Gre~G~~gl~~~t~~ 503 (520)
T 3ed6_A 425 FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYF-AQAPWGGYKQSGIGRELGKEGLEEYLVS 503 (520)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCC-TTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCC-CCCCcCCcCcCcCCccchHHHHHHhhce
Confidence 999999999999999999999999999999999999999999999987764 4599999999999999999999999999
Q ss_pred eEEEEecCCC
Q 011080 480 KSTVINLPTP 489 (494)
Q Consensus 480 k~i~~~~~~~ 489 (494)
|+|+++++.+
T Consensus 504 k~v~~~~~~~ 513 (520)
T 3ed6_A 504 KHILTNTNPQ 513 (520)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEcCCCC
Confidence 9999987654
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-104 Score=821.63 Aligned_cols=465 Identities=31% Similarity=0.516 Sum_probs=437.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++..+.+..+... +....+...++.++|+|||++|+|||||+.+
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 164 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTL-------PTPDANKRIVVVKEPIGVCAAITPWNFPAAM 164 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE-------CCSSTTEEEEEEEEECSSEEEECCSSSTTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccc-------cccCCCceeEEEecCCcEEEEECCCcChHHH
Confidence 999999999999999999999999999999987766544321 1112246788999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|++||+|+.|+|||| .+|+.+.
T Consensus 165 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~ 244 (484)
T 3ifg_A 165 IARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM 244 (484)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988889999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 245 ~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 324 (484)
T 3ifg_A 245 AQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGT 324 (484)
T ss_dssp HHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 887 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
++++++||++++.+++++.++|++++++|+++..++. .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (484)
T 3ifg_A 325 ESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEE 404 (484)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHH
Confidence 8899999999999999999999999999999954432 2699999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.... ...+||||+|+||+|+++|.+|+++|++.|+|++.
T Consensus 405 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 405 LVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS-NEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999986544 35599999999999999999999999999999874
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-103 Score=823.56 Aligned_cols=467 Identities=29% Similarity=0.473 Sum_probs=439.5
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++....+..+... +....+...++.++|+|||++|+|||||+.+
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 184 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTI-------PAPQNGQRLTVIRQPVGVTAAITPWNFPAAM 184 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE-------CCSSTTEEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------ccccccccceeeccCceEEEEECCCcchHHH
Confidence 999999999999999999999999999999988766544321 1112246788999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+|||| .+|+.+.
T Consensus 185 ~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 264 (504)
T 3ek1_A 185 ITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM 264 (504)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988889999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 265 ~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 344 (504)
T 3ek1_A 265 AQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGT 344 (504)
T ss_dssp HHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred HhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCc
Confidence 887 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 407 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 407 (494)
++++++||++++.+++++.++|++++++|++++.++. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 345 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 424 (504)
T 3ek1_A 345 EPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVI 424 (504)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred cccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHH
Confidence 8899999999999999999999999999999964433 468999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecC
Q 011080 408 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 408 ~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
+++|+++|||+++|||+|.++++++++++++|+|+||+..... ..+||||+|+||+|+++|.+|+++|++.|+|+++++
T Consensus 425 ~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 425 AQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISN-EVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCC-SSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 9999999999999999999999999999999999999876443 459999999999999999999999999999998764
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-103 Score=821.48 Aligned_cols=467 Identities=28% Similarity=0.452 Sum_probs=440.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35679999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEe-eeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSK-IPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~ 170 (494)
+|++++++|+|||+.+++.|+..+++.+++++..++++.+...+ .. .+...++.+ +|+|||++|+|||||+
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-------~~-~~~~~~~~~~~P~GVV~~I~PwN~P~ 161 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIP-------EK-PKDCTWTVHYRPVGVTGLIVPWNFPI 161 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECS-------CC-GGGCEEEEEEEECCSEEEECCSSSTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------cC-CCceeeEeecccceEEEEECCCchHH
Confidence 99999999999999999999999999999999998887654321 11 245678888 9999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+|||| .+|+.
T Consensus 162 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~ 241 (506)
T 3rh9_A 162 GMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRK 241 (506)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
|.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 242 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 321 (506)
T 3rh9_A 242 LIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGD 321 (506)
T ss_dssp HHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99987 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---C-CCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---R-EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
| ++++++||++++.+++++.++|++++++|+++..++. . .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 322 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (506)
T 3rh9_A 322 GMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT 401 (506)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCC
Confidence 9 8899999999999999999999999999999954433 2 799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|++|+++|++.|+|
T Consensus 402 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v 480 (506)
T 3rh9_A 402 EEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT-PEAPFGGMKASGIGREGGLEGLFEFVEAQTV 480 (506)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC-TTSCBCCSGGGEESCBSHHHHHTTTEEEEEE
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCccCcCcCcCCcCccHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999999987755 4599999999999999999999999999999
Q ss_pred EEecC
Q 011080 483 VINLP 487 (494)
Q Consensus 483 ~~~~~ 487 (494)
+++..
T Consensus 481 ~~~~~ 485 (506)
T 3rh9_A 481 PRGFA 485 (506)
T ss_dssp EEC--
T ss_pred EEcCc
Confidence 88753
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-102 Score=817.29 Aligned_cols=474 Identities=30% Similarity=0.472 Sum_probs=443.5
Q ss_pred cCCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH-----HhcCCCHHHHHHHHHHHHH
Q 011080 10 ENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-----SWAKTPLWKRAELLHKAAA 84 (494)
Q Consensus 10 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~ 84 (494)
+-...++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++
T Consensus 4 ~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~ 83 (503)
T 3iwj_A 4 PIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAA 83 (503)
T ss_dssp CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHH
T ss_pred CCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHH
Confidence 34567899999999887788999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeC
Q 011080 85 ILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIP 164 (494)
Q Consensus 85 ~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 164 (494)
.|++++++|++++++|+|||+.+++.|+..+++.+++++..+.++.+...... ..+ ..+...++.++|+|||++|+
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~P~GVv~~I~ 159 (503)
T 3iwj_A 84 KVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPV--SLP--MDTFKSHVLREPIGVVGLIT 159 (503)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--CCS--CTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--ccc--CCCccceEEEcCCceEEEEC
Confidence 99999999999999999999999999999999999999998888766532110 011 12457889999999999999
Q ss_pred CCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc
Q 011080 165 PFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG 244 (494)
Q Consensus 165 p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs 244 (494)
|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||
T Consensus 160 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS 239 (503)
T 3iwj_A 160 PWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGS 239 (503)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred -HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 245 -DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 245 -~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
.+|+.|.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 240 ~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 319 (503)
T 3iwj_A 240 SATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIK 319 (503)
T ss_dssp HHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHH
Confidence 9999999887 4799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-----CCCceeecEEEeeCCCCCCCccccccccee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVL 395 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 395 (494)
++++||| ++++++||++++.+++++.+++++++++|+++..|+. ..|+|++|||+.+++++|++++||+||||+
T Consensus 320 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 399 (503)
T 3iwj_A 320 NIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVL 399 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceE
Confidence 9999999 8899999999999999999999999999999954332 468999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHH
Q 011080 396 PVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINM 475 (494)
Q Consensus 396 ~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~ 475 (494)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++
T Consensus 400 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~g~~~ 478 (503)
T 3iwj_A 400 CVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCF-TQAPWGGVKRSGFGRELGEWGLDN 478 (503)
T ss_dssp EEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCC-TTSCBCCSGGGEECCBSHHHHHHT
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcccCCCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876544 459999999999999999999999
Q ss_pred hhceeEEEEecCC
Q 011080 476 MTKIKSTVINLPT 488 (494)
Q Consensus 476 ~~~~k~i~~~~~~ 488 (494)
|++.|+|+++.+.
T Consensus 479 f~~~k~v~~~~~~ 491 (503)
T 3iwj_A 479 YLSVKQVTQYISE 491 (503)
T ss_dssp TEEEEEEEEECCS
T ss_pred hhCeEEEEEeCCC
Confidence 9999999998653
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-103 Score=818.75 Aligned_cols=468 Identities=31% Similarity=0.478 Sum_probs=441.6
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (497)
T 3k2w_A 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKH 90 (497)
T ss_dssp CTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||+.+++.|+..+++.+++++..++++.+...+ ....+...++.++|+|||++|+|||||+.
T Consensus 91 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 163 (497)
T 3k2w_A 91 ILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILP-------SDNQDEKIYIHKVPRGVVVGITAWNFPLA 163 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEE-------CSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-------cCCCCcceeEEEcCCceEEEECCCccHHH
Confidence 99999999999999999999999999999999888777654321 11235678899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+|||| .+|+.+
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i 243 (497)
T 3k2w_A 164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI 243 (497)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999999999 999999
Q ss_pred HHHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 244 ~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 244 YKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99874 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc-----C--CCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK-----R--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~-----~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
++++++||++++.+++++.+++++++++|+++..|+. . +|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 8899999999999999999999999999999954432 1 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++... ..+||||+|+||+|+++|.+|+++|++.|
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~PfGG~k~SG~G~~~G~~gl~~ft~~k 482 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ-HQGFHNGWKQSGFGGEDGKFGLEQYLEKK 482 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCEETSEESCBSHHHHHHTTEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC-CCCCcCCcCCCcCCccchHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999988765 55999999999999999999999999999
Q ss_pred EEEEecC
Q 011080 481 STVINLP 487 (494)
Q Consensus 481 ~i~~~~~ 487 (494)
+|+++++
T Consensus 483 ~v~~~~~ 489 (497)
T 3k2w_A 483 TVYINEA 489 (497)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9998865
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-102 Score=819.24 Aligned_cols=468 Identities=27% Similarity=0.443 Sum_probs=441.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHh--HHhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQ--KSWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
.+++||||+|+.+.++..++++||+| |+++++++.++.+++++++++|++|| ..|+.++..+|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 46799999999877788999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 90 KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
+++|++++++|+|||+.+++.|+..+++.++++++.++++.+...+ ....+...++.++|+|||++|+|||||
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~P~GVV~~I~PwN~P 174 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHN-------NIGDDRLGLVLREPVGVVGIITPWNFP 174 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEC-------CSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeec-------cCCCCceeEEEeccceEEEEECCCccH
Confidence 9999999999999999999999999999999999988776654321 111246788999999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+|||| .+|+
T Consensus 175 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 254 (528)
T 3u4j_A 175 FIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGT 254 (528)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999988889999999999999999999 9999
Q ss_pred HHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 249 SISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 249 ~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 255 ~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 334 (528)
T 3u4j_A 255 KLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334 (528)
T ss_dssp HHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCC
Confidence 999876 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccC----CCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKR----EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
|| ++++++||++++.+++++.+++++++++|+++..|+.. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 335 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 99 88999999999999999999999999999999644322 79999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+... ..+||||+|+||+|+++|.+|+++|++.|+
T Consensus 415 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~ 493 (528)
T 3u4j_A 415 TADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGT-PELPIGGYKKSGLGRELGRYGFDEYSQFKG 493 (528)
T ss_dssp SHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCC-TTSCBCCSGGGEESCBSTTHHHHHTEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCC-CCCCcCCcCcCCCCcCchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999999987654 559999999999999999999999999999
Q ss_pred EEEecCC
Q 011080 482 TVINLPT 488 (494)
Q Consensus 482 i~~~~~~ 488 (494)
|+++.+.
T Consensus 494 v~~~~~~ 500 (528)
T 3u4j_A 494 VHVTLGR 500 (528)
T ss_dssp EEEESSC
T ss_pred EEEeCCC
Confidence 9998763
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-103 Score=816.57 Aligned_cols=465 Identities=24% Similarity=0.399 Sum_probs=438.4
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++ .++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45689999999987666 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
+|++++++|+|||+.++ +.|+..+++.++++++.++++.+...+. ...+...++.++|+|||++|+|||||+
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-------~~~~~~~~~~~~P~GVv~~I~PwN~P~ 175 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGE-------YLPGHTSMIRRDPIGIVGSIAPWNYPL 175 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEE-------EETTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-------CcccccceEEEcCcceEEEECCCchHH
Confidence 99999999999999999 8899999999999999887765443211 012466889999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|++.++++.|+.||+|+.|+|||| .+|+.
T Consensus 176 ~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~ 254 (498)
T 4f3x_A 176 MMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254 (498)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999988889999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
|.+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 255 i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCC-EEe-ecc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAA-TFC-QEY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~-~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
| ++++++||++++.+++++.++|++++++|+ ++. +|. ..+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 9 889999999999999999999999999999 885 443 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+++... ..+||||+|+||+|+++|.+|+++|++.|+|
T Consensus 415 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v 493 (498)
T 4f3x_A 415 KDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493 (498)
T ss_dssp TSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGGEECCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcCCcCccchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999999987765 5599999999999999999999999999999
Q ss_pred EEec
Q 011080 483 VINL 486 (494)
Q Consensus 483 ~~~~ 486 (494)
++++
T Consensus 494 ~~~~ 497 (498)
T 4f3x_A 494 MINH 497 (498)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9875
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-102 Score=812.19 Aligned_cols=460 Identities=34% Similarity=0.567 Sum_probs=428.4
Q ss_pred ceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 011080 16 FFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAE 95 (494)
Q Consensus 16 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 95 (494)
+||||+|+.+ +. ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999874 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHh
Q 011080 96 CLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVS 175 (494)
Q Consensus 96 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 175 (494)
++++|+|||..+++.|+..+++.++++++.+.++.+...+ . .+...++.++|+|||++|+|||||+.+.++
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~-------~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 149 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP-------S--DDRLIFTRREPVGIVGAITPFNFPLNLSAH 149 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC-------C--TTEEEEEEEEECSEEEEEECSSSHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-------C--CCceeEEEEccccEEEEECCCchHHHHHHH
Confidence 9999999999999999999999999999988887654321 1 145778999999999999999999999999
Q ss_pred hHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHc----CCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 176 KIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 176 ~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~a----GlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
++++||++||+||+|||+.+|+++.+|++++.++ |+|+|++|+++|++.++++.|+.||+||.|+|||| .+|+.+
T Consensus 150 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i 229 (486)
T 3pqa_A 150 KIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELI 229 (486)
T ss_dssp HHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHH
Confidence 9999999999999999999999999999999999 99999999999988888999999999999999999 999999
Q ss_pred HHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 251 ~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.+.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||| +
T Consensus 230 ~~~aa~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 309 (486)
T 3pqa_A 230 TKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLD 309 (486)
T ss_dssp HHHCCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHHcCCCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCc
Confidence 998889999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHH
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHH 409 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 409 (494)
+++++||++++.+++++.+++++++++|+++..|+...|+|++|||+ +++++|++++||+||||++|++|+| ||||++
T Consensus 310 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~ 387 (486)
T 3pqa_A 310 EKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDI 387 (486)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHH
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHH
Confidence 89999999999999999999999999999996555557899999999 9999999999999999999999999 999999
Q ss_pred HhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecCCC
Q 011080 410 CNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLPTP 489 (494)
Q Consensus 410 ~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~~~ 489 (494)
+|+++|||+++|||+|.++++++++++++|+|+||+++......+||||+|+||+|+++|.+|+++|++.|+|+++...+
T Consensus 388 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~~ 467 (486)
T 3pqa_A 388 ANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAEN 467 (486)
T ss_dssp HTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC---
T ss_pred HhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCcc
Confidence 99999999999999999999999999999999999987643346999999999999999999999999999999986543
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-102 Score=816.73 Aligned_cols=468 Identities=31% Similarity=0.465 Sum_probs=436.0
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999765667899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 92 PIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
+|++++++|+|||+.+++ .|+..+++.+++++..++++.+...+ .. +........++.++|+|||++|+|||||+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~--~~--~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 192 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIP--IN--QARPNRNLTLTKKEPVGVCGIVIPWNYPL 192 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEEC--CC--CCTTSCEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc--cc--ccCCCCceEEEEecCCccEEEECCCcchH
Confidence 999999999999999998 89999999999999988776654311 00 00011235789999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.+++.+|++||+|+.|+|||| .+|+.
T Consensus 193 ~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~ 272 (517)
T 2o2p_A 193 MMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999 99999
Q ss_pred HHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 250 ISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 250 v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
|.+.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG 352 (517)
T 2o2p_A 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352 (517)
T ss_dssp HHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 988764 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
|| ++++++||++++.+++++.++|++++++|+++..|+. ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 dp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 99 8899999999999999999999999999999954432 2599999999999999999999999999999999999
Q ss_pred --HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 403 --VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 403 --~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++|++.|
T Consensus 433 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k 511 (517)
T 2o2p_A 433 GDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTD-VAAPFGGFKQSGFGKDLGEAALNEYLRIK 511 (517)
T ss_dssp TCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCC-TTSCBCCCGGGEECCBSHHHHHHTTEEEE
T ss_pred CCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCC-CCCCcCCcCcCCcCccChHHHHHHhCCce
Confidence 999999999999999999999999999999999999999999876544 45999999999999999999999999999
Q ss_pred EEEEec
Q 011080 481 STVINL 486 (494)
Q Consensus 481 ~i~~~~ 486 (494)
+|++++
T Consensus 512 ~v~~~~ 517 (517)
T 2o2p_A 512 TVTFEY 517 (517)
T ss_dssp EEEEEC
T ss_pred EEEeeC
Confidence 998763
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-102 Score=813.02 Aligned_cols=469 Identities=29% Similarity=0.478 Sum_probs=439.3
Q ss_pred CcccceeCCeeeeCCCCCe-EEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKS-VTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~-~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+.+.++.. ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999998766677 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.++++++.++++.++... .. .+...++.++|+|||++|+|||||+
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~-------~~-~~~~~~~~~~P~GVv~~I~PwN~P~ 169 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ-------LP-GGAFAYTRREPLGVCAGILAWNYPF 169 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEE-------CG-GGCEEEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-------CC-CCceeEEEEecCceEEEECCCcchH
Confidence 999999999999999999999999999999999988876653211 00 1346788999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++ ++++.|+.||+|+.|+|||| .+|+.
T Consensus 170 ~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~ 248 (503)
T 1a4s_A 170 MIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKK 248 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977 89999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
|.+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||
T Consensus 249 i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 328 (503)
T 1a4s_A 249 VMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328 (503)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCC
Confidence 99877 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--------CCCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
| ++++++||++++.+.+++.+++++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|
T Consensus 329 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (503)
T 1a4s_A 329 PLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSV 408 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEE
Confidence 9 889999999999999999999999999999985 4432 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhh
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMT 477 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~ 477 (494)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++|+
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G~~~G~~~l~~f~ 487 (503)
T 1a4s_A 409 LPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP-VEVPFGGYKMSGFGRENGQATVDYYS 487 (503)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC-TTSCBCCSGGGEECCBSTTGGGGGSE
T ss_pred EecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCC-CCCCCCCcCCCCCCccchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999977644 45899999999999999999999999
Q ss_pred ceeEEEEecCCCC
Q 011080 478 KIKSTVINLPTPS 490 (494)
Q Consensus 478 ~~k~i~~~~~~~~ 490 (494)
+.|+|++++++..
T Consensus 488 ~~k~v~~~~~~~~ 500 (503)
T 1a4s_A 488 QLKTVIVEMGDVD 500 (503)
T ss_dssp EEEEEEECCSCCC
T ss_pred CceEEEEccCCCC
Confidence 9999999876543
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-102 Score=813.56 Aligned_cols=469 Identities=29% Similarity=0.424 Sum_probs=437.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (521)
T 4e4g_A 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNE 105 (521)
T ss_dssp EECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++.......+..... ...+...++.++|+|||++|+|||||+.+
T Consensus 106 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-------~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 178 (521)
T 4e4g_A 106 LAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG-------AGPGIDMYSIRQPVGIGAGITPFNFPGMI 178 (521)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEE-------EETTEEEEEEEEECCEEEEECCSSCTTHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-------CCCCcceeEEEcCCcEEEEECCCcchHHH
Confidence 99999999999999999999999999999987665544332110 01245678999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|+ .+.+..|+.||+||.|+|||| .+|+.|.
T Consensus 179 ~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~ 257 (521)
T 4e4g_A 179 PMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVY 257 (521)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 566799999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccc-hHHHHHHHHHHHHhccccCCC
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|
T Consensus 258 ~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~ 337 (521)
T 4e4g_A 258 GTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPY 337 (521)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCT
T ss_pred HHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCC
Confidence 876 58999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc------CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
++++++||++++.+++++.++|++++++|+++. +|.. .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (521)
T 4e4g_A 338 TDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRA 417 (521)
T ss_dssp TCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCB
T ss_pred CCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEe
Confidence 889999999999999999999999999999995 4421 46899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--CcchHHHHHHhhc
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMTK 478 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~ 478 (494)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......+||||+|.||+| +++|++|+++|++
T Consensus 418 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~ 497 (521)
T 4e4g_A 418 RNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTR 497 (521)
T ss_dssp SSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEE
T ss_pred CCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999886544456899999999999 7999999999999
Q ss_pred eeEEEEecCCC
Q 011080 479 IKSTVINLPTP 489 (494)
Q Consensus 479 ~k~i~~~~~~~ 489 (494)
.|+|+++++..
T Consensus 498 ~K~v~~~~~~~ 508 (521)
T 4e4g_A 498 TKTITSRWPSG 508 (521)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEEecCcc
Confidence 99999987644
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-102 Score=814.97 Aligned_cols=464 Identities=29% Similarity=0.481 Sum_probs=436.1
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHH----HhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCC
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVR----ILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFN 167 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 167 (494)
+|++++++|+|||..++ |+..+++.+++++..+.+ ..+...+ . ..+. .++.++|+|||++|+|||
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~-------~-~~~~-~~~~~~P~GVV~~I~PwN 161 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIP-------L-GGDF-AYTKRVPLGVCVGIGAWN 161 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEE-------C-SSSE-EEEEEEECSEEEEECCSS
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccc-------c-CCCc-ceEEEcCccEEEEECCCc
Confidence 99999999999999999 999999999999988776 3333211 1 1234 889999999999999999
Q ss_pred chHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 168 YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 168 ~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
||+.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+| +.++++.|++||+||.|+|||| .+
T Consensus 162 ~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~ 240 (517)
T 3r31_A 162 YPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPT 240 (517)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHH
T ss_pred chHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999 7889999999999999999999 99
Q ss_pred HHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 247 GISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 247 ~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
|+.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 241 G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 320 (517)
T 3r31_A 241 GRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMI 320 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhcc
Confidence 99999887 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc------CCCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
+||| ++++++||++++.+++++.++|++++++|+++..|+. .+|+|++|||+.+++++|++++||+||||++|
T Consensus 321 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 400 (517)
T 3r31_A 321 LGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCV 400 (517)
T ss_dssp BCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEE
T ss_pred CCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEE
Confidence 9999 8899999999999999999999999999999953333 26899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhh
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMT 477 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~ 477 (494)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+... ..+||||+|+||+|+++|++|+++|+
T Consensus 401 ~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~ft 479 (517)
T 3r31_A 401 LDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCP-VEIPFGGSKQSGFGRENSAAALEHYS 479 (517)
T ss_dssp EEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCC-TTSCBCCEETTEECCBSTGGGGGGSE
T ss_pred EEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCC-CCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999976544 55999999999999999999999999
Q ss_pred ceeEEEEecCC
Q 011080 478 KIKSTVINLPT 488 (494)
Q Consensus 478 ~~k~i~~~~~~ 488 (494)
+.|+|+++...
T Consensus 480 ~~K~v~~~~~~ 490 (517)
T 3r31_A 480 ELKTVYVSTGK 490 (517)
T ss_dssp EEEEEEECCC-
T ss_pred ceEEEEEcCCC
Confidence 99999988654
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-101 Score=805.77 Aligned_cols=465 Identities=29% Similarity=0.526 Sum_probs=437.8
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999877788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||..+++.|+..+++.+++++....+..+... +....+...++.++|+|||++|+|||||+.+
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 161 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI-------PGHQADKRLIVIKQPIGVTAAITPWNFPAAM 161 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEE-------CCSSTTEEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cccCCCceEEEEEcCccEEEEECCCcchHHH
Confidence 999999999999999999999999999999887766544321 1112356778999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|++||+|+.|+|||| .+|+.|.
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 162 ITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988889999999999999999999 9999999
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 321 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTT
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCc
Confidence 887 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc---cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY---KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
++++++||++++.+++++.+++++++++|+++..++ ...|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 322 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 401 (481)
T 3jz4_A 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEAD 401 (481)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred cCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHH
Confidence 889999999999999999999999999999995443 23579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++|++.|+|++.
T Consensus 402 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 402 VIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISN-EVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCC-SSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCC-CCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999999999999999977644 4599999999999999999999999999999875
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-102 Score=810.03 Aligned_cols=477 Identities=28% Similarity=0.447 Sum_probs=419.5
Q ss_pred CCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 11 NGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 11 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
...+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||+.+++.|+..+++.+++++....+..+..... . ...+...++.++|+|||++|+|||||+
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~-~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVP-----S-DIEGKTNKIYRLPLGVISSISPFNFPM 157 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCC-----C-SSTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccc-----c-CCCCceEEEEEecceEEEEECCCccHH
Confidence 9999999999999999999999999999999998876544332110 0 122467889999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHH-HHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAA-LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~-~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
.+.++++++||++||+||+|||+.+|+++ .+|.++|.++|+|+|++|+++|++.++++.|++||+++.|+|||| .+|+
T Consensus 158 ~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~ 237 (485)
T 4dng_A 158 NLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGR 237 (485)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHH
Confidence 99999999999999999999999999999 999999999999999999999987789999999999999999999 9999
Q ss_pred HHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 249 SISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 249 ~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
.+.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 238 ~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 317 (485)
T 4dng_A 238 HIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYG 317 (485)
T ss_dssp HHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 999877 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
+| ++++++||++++.+.+++.+++++++++|+++..++...|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 318 DQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred CCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 99 78999999999999999999999999999999655555799999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||+++......+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~ 477 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQ 477 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998765445699999999999999999999999999999999
Q ss_pred cCCCCCCC
Q 011080 486 LPTPSYTV 493 (494)
Q Consensus 486 ~~~~~~~~ 493 (494)
+....+||
T Consensus 478 ~~~~~~~~ 485 (485)
T 4dng_A 478 KQYRKYPF 485 (485)
T ss_dssp C-------
T ss_pred cCCcCCCC
Confidence 87766664
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-101 Score=809.80 Aligned_cols=468 Identities=29% Similarity=0.463 Sum_probs=437.9
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999876678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.++++++.++++.+... +....+...++.++|+|||++|+|||||+.+
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 178 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRT-------FPVDRDWLYYTVRVPAGPVGIITPWNAPLML 178 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEE-------CCBTTTEEEEEEEEECCCEEEECCSSSHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceeEEEEecCCceEEECCCCchhhh
Confidence 999999999999999999999999999999988777665421 1101245678899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||+||.|+|||| .+|+.|.
T Consensus 179 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 179 STWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977789999999999999999999 9999999
Q ss_pred HHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 8874 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc-C---------CCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK-R---------EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~-~---------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
++++++||++++.+++++.++|++++++|+++. +|.. . .|+|++|||+.+ +++|++++||+||||++|
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v 417 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVA 417 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEE
Confidence 789999999999999999999999999999995 4432 1 589999999999 999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhh
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMT 477 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~ 477 (494)
++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++... ..+||||+|+||+|+++|.+|+++|+
T Consensus 418 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~~~ 496 (515)
T 2d4e_A 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRH-LPTPFGGVKGSGDRREGGTYALDFYT 496 (515)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCC-TTSCBCCSGGGBCSCBSHHHHHHHHE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCC-CCCCCCCcCCCCCCccchHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999876543 45999999999999999999999999
Q ss_pred ceeEEEEecCCC
Q 011080 478 KIKSTVINLPTP 489 (494)
Q Consensus 478 ~~k~i~~~~~~~ 489 (494)
+.|+|+++++.+
T Consensus 497 ~~K~v~~~~~~~ 508 (515)
T 2d4e_A 497 DLKTIALPLRPP 508 (515)
T ss_dssp EEEEEEEESSCC
T ss_pred ceeEEEEcCCCC
Confidence 999999987543
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-101 Score=807.46 Aligned_cols=459 Identities=28% Similarity=0.445 Sum_probs=428.9
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEE-eeeceeEEeeCCCCchH
Q 011080 93 IAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTS-KIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~ 170 (494)
|++++++|+|||+.+++ .|+..+++.++++++....+...... + .+...++. ++|+|||++|+|||||+
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~------~---~~~~~~~~~~~P~GVv~~I~PwN~P~ 175 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL------I---EGNEQAILHYDAIGVVGLITPWNWPM 175 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES------S---TTCSSCEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc------c---CCceeEEEeecCceEEEEECCCcchH
Confidence 99999999999999999 89999999999998876554322110 0 12334567 99999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|+.|+|||| .+|+.
T Consensus 176 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 176 NQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~ 327 (494)
|.+.+ .+||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 256 i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99877 4799999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc--c----CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 328 P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY--K----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 328 p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
| ++++++||++++.+.+++.++|++++++|+++..|+ . ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 414 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEec
Confidence 9 889999999999999999999999999999995443 2 26899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||. .... ..+||||+|.||+|+++|.+|+++|++.|
T Consensus 415 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K 492 (497)
T 3i44_A 415 NTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELP-GGSYFGGVKFSGRAREGGLWGIKEFLDTK 492 (497)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCC-TTCCBCCSGGGCCCCBSHHHHHHTTEEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCC-CCCCcCCcCcCcCCccchHHHHHHhccee
Confidence 999999999999999999999999999999999999999999995 3333 45899999999999999999999999999
Q ss_pred EEE
Q 011080 481 STV 483 (494)
Q Consensus 481 ~i~ 483 (494)
+|+
T Consensus 493 ~v~ 495 (497)
T 3i44_A 493 AIS 495 (497)
T ss_dssp EES
T ss_pred EEE
Confidence 874
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-101 Score=805.92 Aligned_cols=466 Identities=31% Similarity=0.497 Sum_probs=437.0
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH---HhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 45689999999876677899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||+.++. .|+..+++.++++++.++++.+.... . ..+...++.++|+|||++|+||||
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVV~~I~PwN~ 171 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-------M-DGNFFTYTRSEPVGVCGQIIPWNF 171 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-------C-SSSEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeee-------c-cCCcceeEEecCCceEEEECCCcc
Confidence 99999999999999999875 69999999999999988877654211 1 124567899999999999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+|||| .+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 251 (501)
T 1bxs_A 172 PLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999999999999999999988889999999999999999999 999
Q ss_pred HHHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 248 ISISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 248 ~~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
+.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 252 ~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcC
Confidence 9998875 4899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
+||| ++++++||++++.+++++.++|++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (501)
T 1bxs_A 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF 411 (501)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEe
Confidence 9999 889999999999999999999999999999995 4432 36999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|.||+|+++|.+|+++|++.|
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~pfGG~k~SG~G~~~G~~~l~~f~~~K 490 (501)
T 1bxs_A 412 KSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVS-AQCPFGGFKMSGNGRELGEYGFHEYTEVK 490 (501)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCC-TTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCC-CCCCCCCcCcCCcCccchHHHHHHhhCee
Confidence 99999999999999999999999999999999999999999999876544 45999999999999999999999999999
Q ss_pred EEEEecC
Q 011080 481 STVINLP 487 (494)
Q Consensus 481 ~i~~~~~ 487 (494)
+|++++.
T Consensus 491 ~v~~~~~ 497 (501)
T 1bxs_A 491 TVTIKIS 497 (501)
T ss_dssp EEEEECS
T ss_pred EEEEccC
Confidence 9998753
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-101 Score=805.12 Aligned_cols=466 Identities=29% Similarity=0.459 Sum_probs=436.6
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999986667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||+.+++.|+..+++.++++++.++++.+.... ....+...++.++|+|||++|+|||||+.
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 157 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ-------SDRPGENILLFKRALGVTTGILPWNFPFF 157 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEEC-------CSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-------cCCCCceeEEEEeccceEEEECCCchHHH
Confidence 99999999999999999999999999999998877665544211 11123467899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|.+||+++.|+|||| .+|+.|
T Consensus 158 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 237 (479)
T 2imp_A 158 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKI 237 (479)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999977788999999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 238 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 238 MATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 9877 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -C-CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 -E-DDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 -~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
+ +++++||++++.+++++.+++++++++|+++. +|.. .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp TTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred cccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 7 79999999999999999999999999999985 4432 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++|++.|+|+
T Consensus 398 ~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~ 476 (479)
T 2imp_A 398 EDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA-MQGFHAGWRKSGIGGADGKHGLHEYLQTQVVY 476 (479)
T ss_dssp HHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCC-TTSCBCCEETTEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCC-CCCCCCCCCCCCCCCCchHHHHHHhcCeeEEE
Confidence 99999999999999999999999999999999999999999987654 45999999999999999999999999999997
Q ss_pred Ee
Q 011080 484 IN 485 (494)
Q Consensus 484 ~~ 485 (494)
++
T Consensus 477 ~~ 478 (479)
T 2imp_A 477 LQ 478 (479)
T ss_dssp EE
T ss_pred ec
Confidence 74
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-101 Score=808.04 Aligned_cols=473 Identities=32% Similarity=0.488 Sum_probs=426.5
Q ss_pred cCCcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 10 ENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 10 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
.-..+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (508)
T 3r64_A 9 GIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEH 88 (508)
T ss_dssp TBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHh
Confidence 33567899999999877788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 90 KAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
+++|++++++|+|||..+++.|+..+++.+++++....+..+ ..+ . . ...+...++.++|+|||++|+|||||
T Consensus 89 ~~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~--~---~-~~~~~~~~~~~~P~GVv~~I~PwN~P 161 (508)
T 3r64_A 89 REEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RIS--P---S-NTPGKENRVYRVAKGVVGVISPWNFP 161 (508)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEE--C---C-SSTTEEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-ccc--c---c-CCCCceeEEEEecceEEEEECCCcch
Confidence 999999999999999999999999999999999876655433 111 0 0 01246788999999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHH-HHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAA-LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~-~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
+.+.++++++||++||+||+|||+.+|+++ .+|+++|.++|+|+|++|+++|++.++++.|++||++|.|+|||| .+|
T Consensus 162 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g 241 (508)
T 3r64_A 162 LNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241 (508)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHH
Confidence 999999999999999999999999999999 999999999999999999999987889999999999999999999 999
Q ss_pred HHHHHHc----CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcc
Q 011080 248 ISISKKA----GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKL 323 (494)
Q Consensus 248 ~~v~~~a----~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~ 323 (494)
+.+.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++
T Consensus 242 ~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (508)
T 3r64_A 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNI 321 (508)
T ss_dssp HHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhc
Confidence 9999876 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 324 TVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 324 ~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
++||| ++++++||++++.+.+++++++++++++|+++..++..+|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 322 ~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 322 PTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred cCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999 78999999999999999999999999999999655555799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++......+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998765345689999999999999999999999999999
Q ss_pred EEecCCC
Q 011080 483 VINLPTP 489 (494)
Q Consensus 483 ~~~~~~~ 489 (494)
+++...+
T Consensus 482 ~~~~~~~ 488 (508)
T 3r64_A 482 GIKRSAE 488 (508)
T ss_dssp EEECCST
T ss_pred EEecccc
Confidence 9987654
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-101 Score=808.09 Aligned_cols=465 Identities=33% Similarity=0.501 Sum_probs=436.4
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH--HhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK--SWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999876677899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||+.+++ .|+..+++.++++++.++++.+.... . ..+...++.++|+|||++|+|||||
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVv~~I~PwN~P 159 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETR-------T-GSYGQSIVSREPVGVVGAIVAWNVP 159 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEE-------E-ETTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-------C-CCCceEEEEEccCceEEEECCCcch
Confidence 9999999999999999998 89999999999999887776654211 0 1134668999999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+| +.+++..|++||+|+.|+|||| .+|+
T Consensus 160 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~ 238 (495)
T 3b4w_A 160 LFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGR 238 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 8889999999999999999999 9999
Q ss_pred HHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 249 SISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 249 ~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 239 ~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 318 (495)
T 3b4w_A 239 EVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVG 318 (495)
T ss_dssp HHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBC
T ss_pred HHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCC
Confidence 999887 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
|| ++++++||++++.+++++.+++++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (495)
T 3b4w_A 319 PPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPY 398 (495)
T ss_dssp CTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEec
Confidence 99 889999999999999999999999999999995 4432 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+++ . ...+||||+|.||+|+++|.+|+++|++.|
T Consensus 399 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~-~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k 476 (495)
T 3b4w_A 399 DTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-F-DPGSPFGGYKNSGIGRENGPEGVEHFTQQK 476 (495)
T ss_dssp SSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-C-CTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-C-CCCCCCCCCCCCCcCccchHHHHHHhccee
Confidence 99999999999999999999999999999999999999999999876 4 355999999999999999999999999999
Q ss_pred EEEEecCC
Q 011080 481 STVINLPT 488 (494)
Q Consensus 481 ~i~~~~~~ 488 (494)
+|+++++.
T Consensus 477 ~v~~~~~~ 484 (495)
T 3b4w_A 477 SVLLPMGY 484 (495)
T ss_dssp EEECCTTC
T ss_pred EEEEccCc
Confidence 99887643
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-101 Score=801.88 Aligned_cols=463 Identities=29% Similarity=0.438 Sum_probs=434.0
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+.+ ..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 101 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 101 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999997655 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDAVT-EVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|++++++|+|||+.+++. |+..+++.++++++.++++.++..+. ...+...++.++|+|||++|+|||||+.
T Consensus 102 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-------~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 174 (495)
T 1wnd_A 102 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGE-------YLEGHTSMIRRDPLGVVASIAPWNYPLM 174 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEE-------EETTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-------CCCCceeEEeeecCCeEEEECCCcchHH
Confidence 999999999999999998 99999999999998887765442211 0113456889999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|+++|.++ +|+|++|+|+|++.+++..|++||+||.|+|||| .+|+.|
T Consensus 175 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 253 (495)
T 1wnd_A 175 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHI 253 (495)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999987889999999999999999999 999999
Q ss_pred HHHcC--CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a~--~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 254 ~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 333 (495)
T 1wnd_A 254 ISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 333 (495)
T ss_dssp HHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCC
Confidence 99874 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcC-CEEe-ecc-c-CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKA-ATFC-QEY-K-REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~-~~~-~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++++||++++.+++++.+++++++++| +++. +|. . ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 334 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 78999999999999999999999999999 9996 443 2 26999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 414 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLV-SEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCC-TTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999876544 45999999999999999999999999999998
Q ss_pred Ee
Q 011080 484 IN 485 (494)
Q Consensus 484 ~~ 485 (494)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 75
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-101 Score=806.23 Aligned_cols=465 Identities=29% Similarity=0.463 Sum_probs=435.9
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH---HhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
.++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999876678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCch
Q 011080 91 APIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYP 169 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 169 (494)
++|++++++|+|||+.++. .|+..+++.++++++.++++.+.... . ..+...++.++|+|||++|+|||||
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~-------~-~~~~~~~~~~~P~GVv~~I~PwN~P 171 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-------I-DGDFFSYTRHEPVGVCGQIIPWNFP 171 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-------C-SSSEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCccee-------c-CCCceEEEEEecCCcEEEECCCCch
Confidence 9999999999999999875 69999999999999988776654211 1 1234678999999999999999999
Q ss_pred HHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 170 VNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 170 ~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
+.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.+++..|++||+|+.|+|||| .+|+
T Consensus 172 ~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 251 (500)
T 1o04_A 172 LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999999987889999999999999999999 9999
Q ss_pred HHHHHcC---CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc
Q 011080 249 SISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV 325 (494)
Q Consensus 249 ~v~~~a~---~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~ 325 (494)
.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 252 ~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 331 (500)
T 1o04_A 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331 (500)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcC
Confidence 9988754 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 326 GAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 326 g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
||| ++++++||++++.+++++.+++++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 332 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (500)
T 1o04_A 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411 (500)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeC
Confidence 999 789999999999999999999999999999995 4432 259999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... ..+||||+|.||+|+++|.+|+++|++.|+
T Consensus 412 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~ 490 (500)
T 1o04_A 412 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFG-AQSPFGGYKMSGSGRELGEYGLQAYTEVKT 490 (500)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCC-TTSCBCCSGGGEESCBSTGGGGGGGEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCC-CCCCCCCcCCCCCCccchHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999999876544 459999999999999999999999999999
Q ss_pred EEEecC
Q 011080 482 TVINLP 487 (494)
Q Consensus 482 i~~~~~ 487 (494)
|++++.
T Consensus 491 v~~~~~ 496 (500)
T 1o04_A 491 VTVKVP 496 (500)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 998753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-101 Score=808.40 Aligned_cols=466 Identities=29% Similarity=0.476 Sum_probs=433.9
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.+++||||+|+. ++..++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 578999999987 568899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||+.+++.|+..+++.+++++..+.++..... .+. ..+...++.++|+|||++|+|||||+.
T Consensus 115 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~------~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~ 187 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKE------ILS-RPGEQNRYFYTPMGVTVTISPWNFALA 187 (538)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBC------CCC-CTTEEEEEEEEECCEEEEECCSTTTTH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCee------ecc-cCCcceeeecCCCcEEEEECCCchHHH
Confidence 9999999999999999999999999999999988444332211 111 125678899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.+++..|++||+|+.|+|||| .+|+.|
T Consensus 188 ~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i 267 (538)
T 3qan_A 188 IMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRL 267 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999999999 999999
Q ss_pred HHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc
Q 011080 251 SKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK 322 (494)
Q Consensus 251 ~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~ 322 (494)
.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 268 ~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 347 (538)
T 3qan_A 268 YERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347 (538)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence 98873 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeE
Q 011080 323 LTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 398 (494)
Q Consensus 323 ~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~ 398 (494)
+++||| ++++++||++++.+.+++.++|++++++| +++ +|.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 426 (538)
T 3qan_A 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFS 426 (538)
T ss_dssp CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEE
Confidence 999999 78999999999999999999999999999 885 4432 269999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECC-CCCCCCCCCCccCccCCCCC-CcchHHHHHHh
Q 011080 399 RINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIG-SQGITNSINMM 476 (494)
Q Consensus 399 ~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~~pfgG~~~SG~g-~~~g~~~l~~~ 476 (494)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ ........+||||+|+||+| +++|.+|+++|
T Consensus 427 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~f 506 (538)
T 3qan_A 427 KANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506 (538)
T ss_dssp EESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGG
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 44333556999999999999 99999999999
Q ss_pred hceeEEEEecCC
Q 011080 477 TKIKSTVINLPT 488 (494)
Q Consensus 477 ~~~k~i~~~~~~ 488 (494)
++.|+|+++...
T Consensus 507 t~~k~v~~~~~~ 518 (538)
T 3qan_A 507 MQAKTVSEMYAE 518 (538)
T ss_dssp EEEEEEEEEC--
T ss_pred hCeEEEEEecCC
Confidence 999999998643
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-100 Score=798.45 Aligned_cols=463 Identities=51% Similarity=0.826 Sum_probs=433.9
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.+++||||+|+.+.+ .++++||+||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467899999997533 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCC----ceE-EEEeeeceeEEeeCCCC
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERT----KYC-LTSKIPLGVVLAIPPFN 167 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n 167 (494)
|++++++|+|||+.+++.|+..+++.+++++..++++.+..... . ..+ ... ++.++|+|||++|+|||
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~P~GVv~~I~PwN 154 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG--G-----SFEAASKKKIAVVRREPVGLVLAISPFN 154 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEG--G-----GTCGGGTTEEEEEEEEECSEEEEECCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC--C-----CCCccccceeeEEEEeccceEEEECCCC
Confidence 99999999999999999999999999999998887766542111 0 112 355 88999999999999999
Q ss_pred chHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 168 YPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 168 ~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
||+.+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++|++.++++.|+.||+++.|+|||| .+
T Consensus 155 ~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 155 YPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp STTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred chHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 99999999999999999999999999999999999999999999999999999977788999999999999999999 99
Q ss_pred HHHHHHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccC
Q 011080 247 GISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 247 ~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g 326 (494)
|+.+.+.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 235 g~~i~~~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 235 GERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHHHHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHHHHhcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 99999987789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHH
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
|| + ++++||++++.+++++.+++++++++|+++..++...|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 315 ~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 393 (475)
T 1euh_A 315 NPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 393 (475)
T ss_dssp CGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHH
T ss_pred Cccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHH
Confidence 99 6 999999999999999999999999999999644333689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECC-CCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINS-APSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~-~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||+ +... ...+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 394 ai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 472 (475)
T 1euh_A 394 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472 (475)
T ss_dssp HHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEE
Confidence 9999999999999999999999999999999999999998 5544 3569999999999999999999999999999987
Q ss_pred ec
Q 011080 485 NL 486 (494)
Q Consensus 485 ~~ 486 (494)
++
T Consensus 473 ~~ 474 (475)
T 1euh_A 473 DI 474 (475)
T ss_dssp EC
T ss_pred ec
Confidence 63
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-100 Score=801.56 Aligned_cols=469 Identities=32% Similarity=0.486 Sum_probs=435.1
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH-HhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-SWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.+++||||+|+.+. ..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 56789999999753 6899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||+.+++.|+..+++.+++++..++++.+.... ....+. ..+...++.++|+|||++|+|||||+.
T Consensus 96 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~ 172 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP--GDWTYD-TLETEGLVRREPLGVVAAITPFNYPLF 172 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEE--STTSST-TTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc--ccccCC-CcCceEEEEEeeccEEEEECCCccHHH
Confidence 99999999999999999999999999999998877776443211 100010 002367899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++|++ +++..|++||++|.|+|||| .+|+.+
T Consensus 173 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i 251 (501)
T 1uxt_A 173 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERV 251 (501)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999977 88999999999999999999 999999
Q ss_pred HHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 251 ~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.+.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||| +
T Consensus 252 ~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 331 (501)
T 1uxt_A 252 VKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 331 (501)
T ss_dssp HHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHhcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccc
Confidence 998879999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCC-ceeecEEEeeCC---CCCCCcccccccceeeeEecCCHHH
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREG-NLIWPLLLDNVR---PDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
+++++||++++.+.+++.+++++++++|++++.++...| +|++|||+.+++ ++|++++||+||||++|++|+|+||
T Consensus 332 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~de 411 (501)
T 1uxt_A 332 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQ 411 (501)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHH
Confidence 899999999999999999999999999999954433368 999999999999 9999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.++++++++++++|+|+||+++......+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 412 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 491 (501)
T 1uxt_A 412 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 491 (501)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEe
Confidence 99999999999999999999999999999999999999987332345699999999999999999999999999999987
Q ss_pred cC
Q 011080 486 LP 487 (494)
Q Consensus 486 ~~ 487 (494)
+.
T Consensus 492 ~~ 493 (501)
T 1uxt_A 492 YK 493 (501)
T ss_dssp CT
T ss_pred cC
Confidence 53
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-100 Score=796.23 Aligned_cols=463 Identities=29% Similarity=0.471 Sum_probs=433.2
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPI 93 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 93 (494)
.++||||+|+.+. ..++++||+||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999753 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHH
Q 011080 94 AECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA 173 (494)
Q Consensus 94 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 173 (494)
++++++|+|||+.+++.|+..+++.++++++.+++..+... +....+...++.++|+|||++|+|||||+.+.
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 163 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII-------HTPAKDRRALVLKQPIGVAAVITPWNFPSAMI 163 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEE-------CCSCTTCEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------ccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 99999999999999999999999999999988776443321 11112456789999999999999999999999
Q ss_pred HhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEec---CCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 174 VSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVT---GKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 174 ~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~---g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+ |++.++++.|++||+|+.|+|||| .+|+.
T Consensus 164 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 243 (487)
T 2w8n_A 164 TRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKI 243 (487)
T ss_dssp HHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 867788999999999999999999 99999
Q ss_pred HHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc-cccC
Q 011080 250 ISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK-LTVG 326 (494)
Q Consensus 250 v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~-~~~g 326 (494)
|.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|
T Consensus 244 i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G 323 (487)
T 2w8n_A 244 LLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVG 323 (487)
T ss_dssp HHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccC
Confidence 99877 48999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc--CCCc-eeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 327 AP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK--REGN-LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 327 ~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~--~~g~-~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
|| ++++++||++++.+++++.+++++++++|+++..++. ..|+ |++|||+.+++++|++++||+||||++|++|+|
T Consensus 324 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 403 (487)
T 2w8n_A 324 NGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDT 403 (487)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESC
T ss_pred CcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCC
Confidence 99 8899999999999999999999999999999964433 2588 999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+ .+||||+|.||+|+++|.+|+++|++.|+|
T Consensus 404 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~-~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 404 EEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV-ECPFGGVKQSGLGREGSKYGIDEYLELKYV 482 (487)
T ss_dssp HHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCT-TSCBCCSGGGEESCBSTTTGGGGGEEEEEE
T ss_pred HHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCC-CCCCCCCCCCCcCCCchHHHHHHhcCccEE
Confidence 9999999999999999999999999999999999999999999876544 499999999999999999999999999999
Q ss_pred EEec
Q 011080 483 VINL 486 (494)
Q Consensus 483 ~~~~ 486 (494)
+++.
T Consensus 483 ~~~~ 486 (487)
T 2w8n_A 483 CYGG 486 (487)
T ss_dssp EECC
T ss_pred EEec
Confidence 8753
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-99 Score=792.59 Aligned_cols=469 Identities=29% Similarity=0.477 Sum_probs=434.7
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 84 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEE 84 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999876678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++.......++.... ...+...++.++|+|||++|+|||||+.+
T Consensus 85 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~-------~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 157 (486)
T 1t90_A 85 LAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS-------IATDVEAANYRYPIGVVGGIAPFNFPMMV 157 (486)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEE-------EETTEEEEEEEEECSEEEEECCSSCTTHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-------CCCCceeEEEecccCEEEEECCCchhHHH
Confidence 99999999999999999999999999999886555544432110 01134568899999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++| +.+++..|++||+|+.|+|||| .+|+.|.
T Consensus 158 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~ 236 (486)
T 1t90_A 158 PCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVY 236 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 5678999999999999999999 9999998
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccE-EEEccchHHHHHHHHHHHHhccccCCC
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKV-ALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|
T Consensus 237 ~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~ 315 (486)
T 1t90_A 237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNG 315 (486)
T ss_dssp HHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCT
T ss_pred HHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCC
Confidence 876 48999999999999999999999999999999999999999999999 999999 99999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++++||++++.+++++.+++++++++|+++..++. .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~ 395 (486)
T 1t90_A 316 LDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 395 (486)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCH
Confidence 8899999999999999999999999999999954332 36899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--CcchHHHHHHhhceeE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQGITNSINMMTKIKS 481 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~k~ 481 (494)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......+||||+|+||+| +++|.+|+++|++.|+
T Consensus 396 ~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~ 475 (486)
T 1t90_A 396 KEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKV 475 (486)
T ss_dssp HHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999864433345899999999999 8999999999999999
Q ss_pred EEEecCCCC
Q 011080 482 TVINLPTPS 490 (494)
Q Consensus 482 i~~~~~~~~ 490 (494)
|+++++.+.
T Consensus 476 v~~~~~~~~ 484 (486)
T 1t90_A 476 VTARYPAPD 484 (486)
T ss_dssp EEEECCCCC
T ss_pred EEEecCCCC
Confidence 999876553
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-99 Score=794.88 Aligned_cols=465 Identities=26% Similarity=0.396 Sum_probs=431.4
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
..+++||||+|+. ++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 99 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQ 99 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999994 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|+++++.|+|||+.+++.|+..+++.+++++...+++.+... +....+...++.++|+|||++|+|||||+.
T Consensus 100 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~-------~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 172 (500)
T 2j6l_A 100 VLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPIL-------PSERSGHALIEQWNPVGLVGIITAFNFPVA 172 (500)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEE-------CCSSTTEEEEEEEEECSEEEEECCSSSTTH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-------cccCCCceeEEEEecccEEEEECCCcchhh
Confidence 9999999999999999999999999999999887766544321 111123446788999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHH----HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DT 246 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~----~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~ 246 (494)
+.++++++||++||+||+|||+.+|+++.+|++++. ++|+|+|++|+|+| +.++++.|++||++|.|+|||| .+
T Consensus 173 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~ 251 (500)
T 2j6l_A 173 VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQV 251 (500)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHH
T ss_pred HHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHH
Confidence 999999999999999999999999999999988765 56999999999999 7889999999999999999999 99
Q ss_pred HHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 247 GISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 247 ~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
|+.|.+.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 252 g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 331 (500)
T 2j6l_A 252 GKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIR 331 (500)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcc
Confidence 99999876 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
+||| ++++++||++++.+++++.+++++++++|+++. +|.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 332 ~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (500)
T 2j6l_A 332 VGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF 411 (500)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEE
T ss_pred cCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEee
Confidence 9999 789999999999999999999999999999985 4432 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHH--hhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhc
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILIS--DAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTK 478 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~--~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~ 478 (494)
+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+.+......+||||+|.||+|+++|.+|+++|++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~ 491 (500)
T 2j6l_A 412 QNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491 (500)
T ss_dssp CCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhc
Confidence 999999999999999999999999999999999 779999999998765444568999999999999999999999999
Q ss_pred eeEEEEec
Q 011080 479 IKSTVINL 486 (494)
Q Consensus 479 ~k~i~~~~ 486 (494)
.|+|++++
T Consensus 492 ~k~v~~~~ 499 (500)
T 2j6l_A 492 RSTCTINY 499 (500)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEeC
Confidence 99998864
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-99 Score=794.42 Aligned_cols=465 Identities=28% Similarity=0.493 Sum_probs=432.7
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.+++||||+|+.+ +..++++||+ ||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999863 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||+.+++.|+..+++.+++++..++++.+..... . ...+...++.++|+|||++|+|||||+.
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 188 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV-----V-PYPGEDNESFYVPLGAGVVIAPWNFPVA 188 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCC-----C-CCTTEEEEEEEEECCEEEEECCSSSTTH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-----c-CCCCceEEEEEeccceEEEECCCccHHH
Confidence 999999999999999999999999999999999888776643210 0 1123567889999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|+.|+|||| .+|+.|
T Consensus 189 ~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i 268 (516)
T 1uzb_A 189 IFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268 (516)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987889999999999999999999 999999
Q ss_pred HHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhc
Q 011080 251 SKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAK 322 (494)
Q Consensus 251 ~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~ 322 (494)
.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 269 ~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 98765 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 323 LTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 323 ~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
+++|||++++++||++++.+++++.+++++++++| ++ ++|.. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 349 ~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~ 427 (516)
T 1uzb_A 349 LSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred ccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEE
Confidence 99999966899999999999999999999999999 76 45432 3699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCC-CCCCCCccCccCCCCC-CcchHHHHHHhh
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIG-SQGITNSINMMT 477 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g-~~~g~~~l~~~~ 477 (494)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+.. ....+||||+|.||+| +++|.+++++|+
T Consensus 428 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~ 507 (516)
T 1uzb_A 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred eCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcC
Confidence 99999999999999999999999999999999999999999999987653 3345899999999999 479999999999
Q ss_pred ceeEEEEec
Q 011080 478 KIKSTVINL 486 (494)
Q Consensus 478 ~~k~i~~~~ 486 (494)
+.|+|++++
T Consensus 508 ~~k~v~~~~ 516 (516)
T 1uzb_A 508 EMKAVAERF 516 (516)
T ss_dssp EEEEEEEEC
T ss_pred CeeEEEecC
Confidence 999998753
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-99 Score=790.41 Aligned_cols=448 Identities=26% Similarity=0.394 Sum_probs=425.4
Q ss_pred eEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH
Q 011080 30 SVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV 109 (494)
Q Consensus 30 ~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 109 (494)
+++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEE
Q 011080 110 TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVL 189 (494)
Q Consensus 110 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvl 189 (494)
.|+..+++.+++++..++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~--------~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVl 156 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLN--------SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILL 156 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEEC--------CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeecc--------CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 999999999999999998887764321 124578899999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCc
Q 011080 190 KPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGK 266 (494)
Q Consensus 190 kps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~ 266 (494)
|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+|||| .+|+.|.+.+ .++|+++|+|||
T Consensus 157 Kps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk 235 (484)
T 3ros_A 157 KHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGN 235 (484)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred ECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCC
Confidence 999999999999999999999999999999998778888 999999999999999 9999999877 489999999999
Q ss_pred ceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHH
Q 011080 267 DACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANF 345 (494)
Q Consensus 267 ~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~ 345 (494)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||| ++++++||++++.++++
T Consensus 236 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~r 315 (484)
T 3ros_A 236 DAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEK 315 (484)
T ss_dssp CEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHH
T ss_pred CcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88999999999999999
Q ss_pred HHHHHHHHHHcCCEEe-ecc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEe
Q 011080 346 IEGLVMDAKQKAATFC-QEY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422 (494)
Q Consensus 346 ~~~~i~~a~~~Ga~v~-~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 422 (494)
+.++|++++++|+++. +|. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 316 v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 395 (484)
T 3ros_A 316 LEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVI 395 (484)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEE
T ss_pred HHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEE
Confidence 9999999999999995 443 2579999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecC
Q 011080 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 423 s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
|+|.++++++++++++|+|+||+..... +.+||||+|+||+|+++|++|+++|++.|+|+++..
T Consensus 396 t~d~~~a~~~~~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 396 GSDIDRAKKVSAQIETGMTVINGRWITS-GELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CSCHHHHHHHHHHSCSSCCEETSCCCCC-TTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CCCHHHHHHHHHhCccceEEECCCCCCC-CCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999999999999999976544 559999999999999999999999999999998754
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-100 Score=794.68 Aligned_cols=457 Identities=30% Similarity=0.469 Sum_probs=411.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
.+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 56899999999987788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHH-HHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDA-VTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|++++++|+|||+.++ +.|+..+++.++++++.+.++.+.. .....++.++|+|||++|+|||||+.
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~------------~~~~~~~~~~P~GVv~~I~PwN~P~~ 154 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE------------RRGDDLVVKEAIGVSGLITPWNFPTN 154 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE------------EETTEEEEEEECCCEEEECCSSSTTH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc------------CCccceEEecCceEEEEECCCcchHH
Confidence 9999999999999999 7899999999999998887765432 12346789999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++|++.++++.|+.||+++.|+|||| .+|+.+
T Consensus 155 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i 234 (478)
T 3ty7_A 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKI 234 (478)
T ss_dssp HHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC-
T ss_pred HHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988889999999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 235 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp -CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 9877 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-c-----CCCceeecEEEeeCCCCCCCcccccccceeeeEecC
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-K-----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 401 (494)
++++++||++++.+++++++++++++++|+++..++ . ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 315 REDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 889999999999999999999999999999995433 1 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeE
Q 011080 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKS 481 (494)
Q Consensus 402 ~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~ 481 (494)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+ .... ..+||||+|+||+|+++|.+|+++||+.|+
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~-~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~ 472 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRK-PDLPFGGYKQSGLGREWGDYGIEEFLEVKS 472 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-----------------------CCGGGEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCC-CCCCcCCcCcCcCCccchHHHHHHhcCeEE
Confidence 99999999999999999999999999999999999999999999 4433 448999999999999999999999999999
Q ss_pred EE
Q 011080 482 TV 483 (494)
Q Consensus 482 i~ 483 (494)
|+
T Consensus 473 v~ 474 (478)
T 3ty7_A 473 IA 474 (478)
T ss_dssp EE
T ss_pred EE
Confidence 86
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-97 Score=768.41 Aligned_cols=448 Identities=28% Similarity=0.434 Sum_probs=423.5
Q ss_pred CCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHH
Q 011080 28 GKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKD 107 (494)
Q Consensus 28 ~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 107 (494)
...++++||+||+++++++.++.+++++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEE
Q 011080 108 AVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187 (494)
Q Consensus 108 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~v 187 (494)
++.|+..+++.++++++...++.+... . ...+...++.++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~~-~-------~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~V 157 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPEP-T-------LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSY 157 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEE-C-------SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCcc-c-------CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEE
Confidence 999999999999999998887766531 1 11245678999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecC
Q 011080 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELG 264 (494)
Q Consensus 188 vlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~g 264 (494)
|+|||+.+|+++.+|+++|.++|+|+|++|+++| +.+.+..|+.||+++.|+|||| .+|+.|.+.+ ..+|+++|+|
T Consensus 158 vlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElG 236 (462)
T 3etf_A 158 LLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELG 236 (462)
T ss_dssp EEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred EEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcC
Confidence 9999999999999999999999999999999999 4678889999999999999999 9999999876 5899999999
Q ss_pred CcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHH
Q 011080 265 GKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSA 343 (494)
Q Consensus 265 G~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~ 343 (494)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++||| ++++++||++++.++
T Consensus 237 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 316 (462)
T 3etf_A 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLR 316 (462)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHH
T ss_pred CCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 889999999999999
Q ss_pred HHHHHHHHHHHHcCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEE
Q 011080 344 NFIEGLVMDAKQKAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGC 420 (494)
Q Consensus 344 ~~~~~~i~~a~~~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 420 (494)
+++.+++++++++|+++..++. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 317 ~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~ 396 (462)
T 3etf_A 317 DELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSAT 396 (462)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEE
Confidence 9999999999999999954432 4799999999999999999999999999999999999999999999999999999
Q ss_pred EeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 421 VFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 421 v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
|||+|.++++++++++++|+|+||++.... ..+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 397 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 397 IFTADDTLAAEMAARLECGGVFINGYSASD-ARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp EECSCHHHHHHHHHHCCSSEEEESSCCCCC-TTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence 999999999999999999999999987544 4599999999999999999999999999999875
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-96 Score=775.76 Aligned_cols=465 Identities=22% Similarity=0.307 Sum_probs=427.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHc-
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQ- 89 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~- 89 (494)
..+++||||+|+.+. ..+.++||+| ++++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 468899999999753 4678899998 799999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDAVTE-VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||+.+++.| +.++++.+++++..+.++.+.... .. ......+.++.|+|||++|+||||
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~------~~-~~~~~~~~~r~p~GVV~~I~PwNf 212 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPI------SV-PPSTNHTVYRGLEGFVAAISPFNF 212 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCC------CC-TTEEEEEECCBCSSEEEEECCSSC
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCcc------CC-CCCcceEEEecCceEEEEECCchH
Confidence 9999999999999999999987 999999999999998887764311 11 113445667777899999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+....+++++|| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|++.++++.|+.||+|++|+|||| .+|
T Consensus 213 P~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG 291 (563)
T 4e3x_A 213 TAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTF 291 (563)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHH
Confidence 9999999999999 59999999999999999999999999999999999999988889999999999999999999 999
Q ss_pred HHHHHHc--CCC------ceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHH
Q 011080 248 ISISKKA--GMI------PLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAK 319 (494)
Q Consensus 248 ~~v~~~a--~~~------~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 319 (494)
+.|.+.+ .++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 292 ~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~ 371 (563)
T 4e3x_A 292 KHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEE 371 (563)
T ss_dssp HHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHH
Confidence 9998876 355 59999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCC--CCCCCCCccCCHHHHHHHHHHHHHHHH-cCCEEeeccc---CCCceeecEEEeeCCCCCCCcccccccc
Q 011080 320 VAKLTVGAP--EDDCDITPVVTESSANFIEGLVMDAKQ-KAATFCQEYK---REGNLIWPLLLDNVRPDMRIAWEEPFGP 393 (494)
Q Consensus 320 ~~~~~~g~p--~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 393 (494)
++++++||| ++++++||++++.+++++.++|+++++ +|++++.|+. .+|+|++|||+.+++++|++++||+|||
T Consensus 372 ~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 451 (563)
T 4e3x_A 372 HSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGP 451 (563)
T ss_dssp HHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSS
T ss_pred HHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCe
Confidence 999999999 468999999999999999999999996 7999954432 4699999999999999999999999999
Q ss_pred eeeeEecCC--HHHHHHHH-hcCCCCceEEEeccCHHHHHHHHhhcc--cceEEECCCCCC-CCCCCCccCccCCCCC-C
Q 011080 394 VLPVIRINS--VEEGIHHC-NASNFGLQGCVFTRDINKAILISDAME--TGTVQINSAPSR-GPDHFPFQGLKDSGIG-S 466 (494)
Q Consensus 394 vl~v~~~~~--~~eai~~~-n~~~~gl~a~v~s~d~~~~~~~~~~~~--~g~v~iN~~~~~-~~~~~pfgG~~~SG~g-~ 466 (494)
|++|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+|+||+.++. ....+||||+|.||+| +
T Consensus 452 Vl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~ 531 (563)
T 4e3x_A 452 VLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDK 531 (563)
T ss_dssp EEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCC
T ss_pred EEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCc
Confidence 999999997 79999999 789999999999999999999999975 999999998763 2345899999999998 8
Q ss_pred cchHHHHHHhhceeEEEEec
Q 011080 467 QGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 467 ~~g~~~l~~~~~~k~i~~~~ 486 (494)
++|+++|++|++.|+|..+.
T Consensus 532 ~~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 532 PGGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TTSTTGGGGGBCCEEEEEEC
T ss_pred cCCHHHHHHhCceEEEEEeC
Confidence 99999999999999998885
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-95 Score=763.43 Aligned_cols=457 Identities=27% Similarity=0.383 Sum_probs=424.7
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+. +..++++||+||+++++++.++.+++++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 5 ~~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 5 MSTHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CCCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998763 56799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++....++.+..... ......++.++|+|||++|+|||||+.+
T Consensus 84 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 155 (490)
T 3ju8_A 84 LARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP--------LADATAVLRHKPHGVVAVFGPYNFPGHL 155 (490)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE--------ETTEEEEEEEEECSEEEEECCSSSTTHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------CCCCeeeEEECCCCEEEEECCCcchHHH
Confidence 99999999999999999999999999999988877766543211 1124456779999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+++| +.+.++.|+.||++|.|+|||| .+|+.+.
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 234 (490)
T 3ju8_A 156 PNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLH 234 (490)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 6789999999999999999999 9999999
Q ss_pred HHc--CCCce-EEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccch-HHHHHHHHHHHHhccccCC
Q 011080 252 KKA--GMIPL-QMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESV-ADTLVEKVKAKVAKLTVGA 327 (494)
Q Consensus 252 ~~a--~~~~~-~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~ 327 (494)
+.+ +++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+
T Consensus 235 ~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~ 314 (490)
T 3ju8_A 235 SQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGR 314 (490)
T ss_dssp HHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCC
Confidence 987 36887 7999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred -C-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCC
Q 011080 328 -P-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 328 -p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 402 (494)
| ++.+++||++++.+.+++.+++++++++|++++ +|.. .+|+|++|||+. +++++++++||+||||++|++|+|
T Consensus 315 ~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~ 393 (490)
T 3ju8_A 315 FDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSD 393 (490)
T ss_dssp TTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESS
T ss_pred CCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCC
Confidence 8 889999999999999999999999999999985 4422 478999999999 999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.......+||||+|.||++ ++++|++.|+|
T Consensus 394 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v 467 (490)
T 3ju8_A 394 FAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYC 467 (490)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEE
Confidence 999999999999999999999999999999999999999999987654456999999999974 58899999999
Q ss_pred EEec
Q 011080 483 VINL 486 (494)
Q Consensus 483 ~~~~ 486 (494)
++..
T Consensus 468 ~~~~ 471 (490)
T 3ju8_A 468 AYPV 471 (490)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8775
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-96 Score=761.44 Aligned_cols=457 Identities=25% Similarity=0.383 Sum_probs=421.1
Q ss_pred CCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh
Q 011080 26 SSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA 105 (494)
Q Consensus 26 ~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 105 (494)
.++++++++||+||+++++++.++.+++++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCC
Q 011080 106 KDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGN 185 (494)
Q Consensus 106 ~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN 185 (494)
++..|+...++.+++++..+.+++...... ........+..++|+|||++|+|||||+.+.++++++||++||
T Consensus 83 -~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN 155 (474)
T 4h7n_A 83 -ITVLEIDSFLASIDRWCGLAPELLQTSAKN------TSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGC 155 (474)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHCCEEEE------CSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHhhhhhcccccccC------CCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCC
Confidence 556799999999999888877776543221 1112345667889999999999999999999999999999999
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEe
Q 011080 186 SIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQME 262 (494)
Q Consensus 186 ~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le 262 (494)
+||+|||+.+|.++..+++++.++|+|+|++++++| +.+.+..|..| ++.|+|||| .+|+.+++.+ +++|+++|
T Consensus 156 ~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lE 232 (474)
T 4h7n_A 156 AVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLE 232 (474)
T ss_dssp EEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhccccccccc
Confidence 999999999999999999999999999999999999 56788888876 899999999 9999998876 48999999
Q ss_pred cCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHH
Q 011080 263 LGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTES 341 (494)
Q Consensus 263 ~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~ 341 (494)
+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++.
T Consensus 233 lGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 312 (474)
T 4h7n_A 233 LGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEK 312 (474)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHH
T ss_pred CCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 7899999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEeeccc----CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCc
Q 011080 342 SANFIEGLVMDAKQKAATFCQEYK----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGL 417 (494)
Q Consensus 342 ~~~~~~~~i~~a~~~Ga~v~~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 417 (494)
+.+++.+++++++++|+++..|+. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 313 ~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 392 (474)
T 4h7n_A 313 QAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGL 392 (474)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCC
Confidence 999999999999999999964432 3689999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCHHHHHHHHhhcccceEEECCCCCC-CCCCCCccCccCCCCC-CcchHHHHHHhhceeEEEEecCCCCCC
Q 011080 418 QGCVFTRDINKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIG-SQGITNSINMMTKIKSTVINLPTPSYT 492 (494)
Q Consensus 418 ~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i~~~~~~~~~~ 492 (494)
+++|||+|.++++++++++++|+|+||+.+.. .....||||+|.||+| +++|.+|+++|++.|+|+++......|
T Consensus 393 ~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p 469 (474)
T 4h7n_A 393 SAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDP 469 (474)
T ss_dssp EEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCT
T ss_pred eEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCC
Confidence 99999999999999999999999999998763 3345899999999998 789999999999999999997554333
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-94 Score=796.45 Aligned_cols=466 Identities=27% Similarity=0.466 Sum_probs=435.9
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCC-CCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTT-RKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+. ++..++++||+| ++++++++.++.+++++|+++|++|++.|+.+|..+|.++|+++++.|++++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 3678999999986 357899999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||..+++.|+..+++.++|++..+.++.+..... . ..+...++.++|+|||++|+|||||+
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~---~----~~g~~~~~~~~PlGVV~~I~PwNfPl 680 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVG---H----APGELNHYFYEPKGVAAVIAPWNFPL 680 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEC---C----CTTEEEEEEEEECSEEEEECCSSSTT
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCcccc---C----CCCccceeEeecCceEEEeCCCccHH
Confidence 9999999999999999999999999999999999988876543211 0 12456788999999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|++||+|+.|+|||| .+|+.
T Consensus 681 ~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 681 AISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999 99999
Q ss_pred HHHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
|.+.++ .+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 998764 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEE-eeccc-C-CCceeecEEEeeCCCCCCCcccccccceeee
Q 011080 322 KLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATF-CQEYK-R-EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPV 397 (494)
Q Consensus 322 ~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~~~~-~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 397 (494)
++++|+| ++++++||++++.+.+++.++|++++++| ++ ++|.. . .|+|+.|||+.++++++++++||+||||++|
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 919 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAV 919 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEE
Confidence 9999999 88999999999999999999999999999 66 45432 2 3999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCCC-cchHHHHHH
Q 011080 398 IRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIGS-QGITNSINM 475 (494)
Q Consensus 398 ~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~-~~g~~~l~~ 475 (494)
++|+|+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.++.. ...+||||+|.||+|+ .+|++++++
T Consensus 920 ~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~ 999 (1026)
T 4f9i_A 920 MRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLH 999 (1026)
T ss_dssp EEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGG
T ss_pred EEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999987643 3458999999999995 689999999
Q ss_pred hhceeEEEEecC
Q 011080 476 MTKIKSTVINLP 487 (494)
Q Consensus 476 ~~~~k~i~~~~~ 487 (494)
|++.|+|+++..
T Consensus 1000 f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 1000 FMDPRVVTENTM 1011 (1026)
T ss_dssp GEEEEEEEEECC
T ss_pred hceEEEEEEecc
Confidence 999999999864
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-94 Score=762.84 Aligned_cols=466 Identities=22% Similarity=0.280 Sum_probs=415.5
Q ss_pred ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHH-hHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLA-QKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
+++||||+|+.+.+ ..++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|+++++.|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 67899999997544 479999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCC-CCceEEEEeeec-eeEEeeCCCCchH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE-RTKYCLTSKIPL-GVVLAIPPFNYPV 170 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~-GVv~~i~p~n~P~ 170 (494)
|++++++|+|||+.+++.|+..+++.+++++..++++.+...++..+..+... .....+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 99999999999999999999999999999988776554322111111001111 122457889997 9999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcC-CCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGI 248 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aG-lP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~ 248 (494)
.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| ++++.|+|||| .+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999999655444333 57899999999 9999
Q ss_pred HHHHHc----CCCceEEecCCcceEEEeCCC-----CHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHH
Q 011080 249 SISKKA----GMIPLQMELGGKDACIILEDA-----DLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAK 319 (494)
Q Consensus 249 ~v~~~a----~~~~~~le~gG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 319 (494)
.|.+.+ .+||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 322 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAK 322 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHH
Confidence 998753 489999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe-eccc--------CCCceeecEEEeeCCCC--CCCcc
Q 011080 320 VAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC-QEYK--------REGNLIWPLLLDNVRPD--MRIAW 387 (494)
Q Consensus 320 ~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~-~~~~--------~~g~~~~Ptvl~~~~~~--~~~~~ 387 (494)
++++++||| ++++++||++++.+++++.++|+++ .+|++++ +|.. ..|+|++|||+.+++++ +++++
T Consensus 323 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~ 401 (534)
T 2y53_A 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHD 401 (534)
T ss_dssp HTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTT
T ss_pred HHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHh
Confidence 999999999 8899999999999999999999999 6899984 4431 25899999999999887 68999
Q ss_pred cccccceeeeEecC---CH-----HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc--ccceEEECCCCC--------C
Q 011080 388 EEPFGPVLPVIRIN---SV-----EEGIHHCNASNFGLQGCVFTRDINKAILISDAM--ETGTVQINSAPS--------R 449 (494)
Q Consensus 388 ~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~--~~g~v~iN~~~~--------~ 449 (494)
||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+|+||++.. .
T Consensus 402 eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~ 481 (534)
T 2y53_A 402 VEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481 (534)
T ss_dssp CCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSC
T ss_pred CCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCC
Confidence 99999999999999 99 999999999999999999999999999999999 899999998632 1
Q ss_pred CCCCCCccCccCCCCCCc-chHHHHHHhhceeEEEEe
Q 011080 450 GPDHFPFQGLKDSGIGSQ-GITNSINMMTKIKSTVIN 485 (494)
Q Consensus 450 ~~~~~pfgG~~~SG~g~~-~g~~~l~~~~~~k~i~~~ 485 (494)
....+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus 482 ~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 234589999999999999 799999999999998763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-92 Score=732.00 Aligned_cols=442 Identities=24% Similarity=0.330 Sum_probs=391.9
Q ss_pred CeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHH
Q 011080 29 KSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA 108 (494)
Q Consensus 29 ~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 108 (494)
..++++||+||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEE
Q 011080 109 V-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSI 187 (494)
Q Consensus 109 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~v 187 (494)
+ .|+..+++.++++++.++++........ +....+...++.++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~V 161 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPS----PDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTC 161 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECC----CGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccc----cccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEE
Confidence 8 5999999999999998888775421110 1001245678999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecC
Q 011080 188 VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELG 264 (494)
Q Consensus 188 vlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~g 264 (494)
|+|||+.+|+++.+|++++.++ +|+|++|+++| +.+.+..|++ +++|.|+|||| .+|+.|.+.+ .++|+++|+|
T Consensus 162 VlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElG 238 (457)
T 3lns_A 162 IIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELG 238 (457)
T ss_dssp EEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECC
T ss_pred EEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECC
Confidence 9999999999999999999998 99999999999 6788999998 78999999999 9999999876 4799999999
Q ss_pred CcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHH
Q 011080 265 GKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSAN 344 (494)
Q Consensus 265 G~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~ 344 (494)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.+. ++||++++.+++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~ 314 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQ 314 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 6334 999999999999
Q ss_pred HHHHHHHHHHHcCCEEe-ecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhc-CCCCceEEE
Q 011080 345 FIEGLVMDAKQKAATFC-QEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA-SNFGLQGCV 421 (494)
Q Consensus 345 ~~~~~i~~a~~~Ga~v~-~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a~v 421 (494)
++.++++++. +++. +|. ..+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v 391 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYV 391 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEE
T ss_pred HHHHHHHhcC---CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEE
Confidence 9999999853 4664 443 247899999999999999999999999999999999999999999999 999999999
Q ss_pred eccCHHHHHHHHhhcccceEEECCCCC-CCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEE
Q 011080 422 FTRDINKAILISDAMETGTVQINSAPS-RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVI 484 (494)
Q Consensus 422 ~s~d~~~~~~~~~~~~~g~v~iN~~~~-~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~ 484 (494)
||+|.++++++++++++|+|+||++.. .....+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 392 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 392 FGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp ECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 999999999999999999999999764 234569999999999999999999999999999976
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-91 Score=737.58 Aligned_cols=470 Identities=21% Similarity=0.230 Sum_probs=415.6
Q ss_pred cccccccCCcccceeCCeeeeCCCCCeEEeeCCCCCCceE-EEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHH
Q 011080 4 FEEIVDENGVYKFFYDGVWRKSSSGKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKA 82 (494)
Q Consensus 4 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~ 82 (494)
|..|......+++||||+|+.+.+ ++||+||++++ +++.++.+++++++++|++||+.|+.++..+|.++|+++
T Consensus 20 ~~~~~~~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 94 (528)
T 3v4c_A 20 FQSMMIFTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAI 94 (528)
T ss_dssp ---CCSCCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHhhhcccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 344555566788999999987532 89999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHH--HhcCccccc-cCCCCCCCCCceEEEEeeecee
Q 011080 83 AAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVR--ILGEGKLLV-SDSFPGNERTKYCLTSKIPLGV 159 (494)
Q Consensus 83 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GV 159 (494)
++.|++++++|++++++|+|||+.+++.|+..+++.++++++.+++ +.+...... +...+ ..+...++.++|+||
T Consensus 95 a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GV 172 (528)
T 3v4c_A 95 ADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQP--APRQEIRLVQRPVGP 172 (528)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSS--SCBCCEEEEEEECSC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccC--CCCCcceeEeeCCcE
Confidence 9999999999999999999999999999999999999999988877 333221100 00001 113446789999999
Q ss_pred EEeeCCCCchHHHHH--hhHHHHhhcCCEEEEcCCCCChHHHHHHHHHH----HHcCCCCCcEEEecCCchhhHhhhhhC
Q 011080 160 VLAIPPFNYPVNLAV--SKIAPALIAGNSIVLKPPTQGAVAALHMVHCF----HLAGFPKGLISCVTGKGSEIGDFLTMH 233 (494)
Q Consensus 160 v~~i~p~n~P~~~~~--~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l----~~aGlP~g~i~~v~g~~~~~~~~L~~~ 233 (494)
|++|+|||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++..|++|
T Consensus 173 v~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~ 252 (528)
T 3v4c_A 173 VAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQH 252 (528)
T ss_dssp EEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHC
T ss_pred EEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhC
Confidence 999999999999865 89999999999999999999999999999865 578999999999999888899999999
Q ss_pred CCccEEEEecc-HHHHHHHHHc--CC--CceEEecCCcceEEEeCCC---CHHHHHHHHHHHHhhccCCCccCccEEEEc
Q 011080 234 PSINCISFTGG-DTGISISKKA--GM--IPLQMELGGKDACIILEDA---DLDLAAANIVKGGFSYSGQRCTAVKVALVM 305 (494)
Q Consensus 234 ~~v~~v~ftGs-~~~~~v~~~a--~~--~~~~le~gG~~~~iV~~da---Dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~ 305 (494)
|+|++|+|||| .+|+.|.+.+ .+ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||
T Consensus 253 p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 332 (528)
T 3v4c_A 253 PHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVI 332 (528)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEE
T ss_pred CCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEe
Confidence 99999999999 9999999876 45 8999999999999999999 889999999999999999999999999999
Q ss_pred cc-hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCC--
Q 011080 306 ES-VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPD-- 382 (494)
Q Consensus 306 ~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~-- 382 (494)
++ ++|+|+++|++++++++.| +.+||++++.+.+++.++++ ++|+++..|+...|+|++|||+.+++++
T Consensus 333 ~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 333 EGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT---RNAVKPLLATESSGRDASPNLFETTGAQFL 404 (528)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCCCTTEECCEEEEEEHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCcCCceeccEEEEecCcccc
Confidence 97 9999999999999988643 67899998888777777653 4799996555558999999999988887
Q ss_pred -CCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEecc--CHHHHHHHHhhcc--cceEEECCCCCC--CCCCCC
Q 011080 383 -MRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTR--DINKAILISDAME--TGTVQINSAPSR--GPDHFP 455 (494)
Q Consensus 383 -~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~--d~~~~~~~~~~~~--~g~v~iN~~~~~--~~~~~p 455 (494)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||++++. ....+|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 999999997763 235599
Q ss_pred ccC-ccCCCCCCcc--hHHHHHHhhceeEEEEecCCC
Q 011080 456 FQG-LKDSGIGSQG--ITNSINMMTKIKSTVINLPTP 489 (494)
Q Consensus 456 fgG-~~~SG~g~~~--g~~~l~~~~~~k~i~~~~~~~ 489 (494)
||| +|.||+|+++ |++|+++|++.|++ .++|..
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~p~~ 520 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSIRRFLRPVAY-QNMPED 520 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESCCGG
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcCCcc
Confidence 999 9999999985 99999999999974 666653
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-90 Score=716.95 Aligned_cols=427 Identities=26% Similarity=0.378 Sum_probs=387.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHH
Q 011080 47 ACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEE 125 (494)
Q Consensus 47 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 125 (494)
..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..+...++++++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456779999999999999999999999999999999999999999999999999999999997 5999999999998888
Q ss_pred hHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHH
Q 011080 126 GVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHC 205 (494)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~ 205 (494)
...+....... ... .......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|+++
T Consensus 94 ~~~~~~~~~~~--~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l 169 (469)
T 3sza_A 94 LPEWAADEPVE--KTP--QTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI 169 (469)
T ss_dssp HHHHHSCEECC--CCG--GGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHH
T ss_pred HHhhhcccccC--ccc--cCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence 77776542211 000 01234678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHH
Q 011080 206 FHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAA 282 (494)
Q Consensus 206 l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~ 282 (494)
+.++ +|+|++|+++|+ .+.+..|+.| ++|.|+|||| .+|+.|.+.+ .++|+++|+|||||+||++|||++.|++
T Consensus 170 ~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~ 246 (469)
T 3sza_A 170 IPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246 (469)
T ss_dssp HHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHH
T ss_pred HHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHH
Confidence 9998 999999999994 4455667777 8999999999 9999999876 4899999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEe
Q 011080 283 NIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFC 361 (494)
Q Consensus 283 ~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~ 361 (494)
.+++++|.|+||.|++++|||||++++|+|+++|+++++++ .|+| ++++++||++++.+++++.+++ +|+++.
T Consensus 247 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~ 320 (469)
T 3sza_A 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVA 320 (469)
T ss_dssp HHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEE
Confidence 99999999999999999999999999999999999999988 5988 7899999999999999999998 688985
Q ss_pred -ecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccc
Q 011080 362 -QEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETG 439 (494)
Q Consensus 362 -~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g 439 (494)
+|. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|
T Consensus 321 ~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G 400 (469)
T 3sza_A 321 YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSG 400 (469)
T ss_dssp ECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCS
T ss_pred eCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 443 246899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEECCCCC-CCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 440 TVQINSAPS-RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 440 ~v~iN~~~~-~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
+|+||++.. .....+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 401 ~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 401 GVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 999999864 23455999999999999999999999999999998874
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-88 Score=709.62 Aligned_cols=447 Identities=18% Similarity=0.194 Sum_probs=399.6
Q ss_pred CCCCCeEEeeCCCCCCce-EEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCC
Q 011080 25 SSSGKSVTIINPTTRKPH-FRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAK 103 (494)
Q Consensus 25 ~~~~~~~~v~~P~tg~~i-~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 103 (494)
+.++..++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345678999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHH--HhcCccccc-cCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHH--HhhHH
Q 011080 104 PAKDAVTEVVRSGDLVSYCAEEGVR--ILGEGKLLV-SDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLA--VSKIA 178 (494)
Q Consensus 104 ~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~~ 178 (494)
|+.+++.|+..+++.++++++.+++ +++...... +...+. .....++.++|+|||++|+|||||+.+. .++++
T Consensus 83 ~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~ 160 (510)
T 1ez0_A 83 PEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL--PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTA 160 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSS--CBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCC--CCCCceEEEecCcEEEEECCccchhhhhhhHHHHH
Confidence 9999999999999999999988876 443321000 000011 1123578999999999999999999985 49999
Q ss_pred HHhhcCCEEEEcCCCCChHHHHHHHHHH----HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHH
Q 011080 179 PALIAGNSIVLKPPTQGAVAALHMVHCF----HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKK 253 (494)
Q Consensus 179 ~aL~aGN~vvlkps~~~~~t~~~l~~~l----~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~ 253 (494)
+||++||+||+|||+.+|+++.++++++ .++|+|+|++|+++|++.+++..|++||+||.|+|||| .+|+.|.+.
T Consensus 161 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 240 (510)
T 1ez0_A 161 SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240 (510)
T ss_dssp HHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHH
Confidence 9999999999999999999999999988 56899999999999977889999999999999999999 999999987
Q ss_pred cC----CCceEEecCCcceEEEeCCCCHH--HHHHHHHHHHhhccCCCccCccEEEEccc-hHHHHHHHHHHHHhccccC
Q 011080 254 AG----MIPLQMELGGKDACIILEDADLD--LAAANIVKGGFSYSGQRCTAVKVALVMES-VADTLVEKVKAKVAKLTVG 326 (494)
Q Consensus 254 a~----~~~~~le~gG~~~~iV~~daDl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~~~~~~g 326 (494)
++ .+|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 241 aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~-- 318 (510)
T 1ez0_A 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS-- 318 (510)
T ss_dssp HHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC--
T ss_pred hhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC--
Confidence 63 39999999999999999999999 99999999999999999999999999999 99999999999999886
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHHHH-cCCEEeecccCCCceeecEEEeeCCCC---CCCcccccccceeeeEecCC
Q 011080 327 APEDDCDITPVVTESSANFIEGLVMDAKQ-KAATFCQEYKREGNLIWPLLLDNVRPD---MRIAWEEPFGPVLPVIRINS 402 (494)
Q Consensus 327 ~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPvl~v~~~~~ 402 (494)
.||++++.+.+++.++++++++ +|+++..|+. .|+|++|||+.+++++ |++++||+||||++|++|+|
T Consensus 319 -------~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 319 -------PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp -------CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred -------CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 3688889999999999999984 7999964444 4999999999988777 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEeccCH--HHHHHHHhhc--ccceEEECCCCCC--CCCCCCccC-ccCCCCCCc--chHHHH
Q 011080 403 VEEGIHHCNASNFGLQGCVFTRDI--NKAILISDAM--ETGTVQINSAPSR--GPDHFPFQG-LKDSGIGSQ--GITNSI 473 (494)
Q Consensus 403 ~~eai~~~n~~~~gl~a~v~s~d~--~~~~~~~~~~--~~g~v~iN~~~~~--~~~~~pfgG-~~~SG~g~~--~g~~~l 473 (494)
+||||+++|+++|||+++|||+|. ++++++++++ ++|+|+||+++.. ....+|||| +|.||+|+. +|.+|+
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl 470 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAI 470 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGG
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHH
Confidence 999999999999999999999987 7999999999 7999999987642 234589999 799999854 799999
Q ss_pred HHhhceeEEE
Q 011080 474 NMMTKIKSTV 483 (494)
Q Consensus 474 ~~~~~~k~i~ 483 (494)
++|++.|++.
T Consensus 471 ~~~~~~k~~~ 480 (510)
T 1ez0_A 471 HRWLRPVAYQ 480 (510)
T ss_dssp GGGEEEEEEE
T ss_pred HHhheEEEEc
Confidence 9999998763
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-86 Score=731.54 Aligned_cols=433 Identities=29% Similarity=0.455 Sum_probs=403.2
Q ss_pred EeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Q 011080 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAE 124 (494)
Q Consensus 45 ~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 124 (494)
++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.+++++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHH
Q 011080 125 EGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVH 204 (494)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~ 204 (494)
.++++.+..... +. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++
T Consensus 624 ~a~~~~g~~~~~-----~~-~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~e 697 (1001)
T 3haz_A 624 QGRKLFGSETAM-----PG-PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVA 697 (1001)
T ss_dssp HHHHHHSSCEEC-----CC-CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHH
T ss_pred HHHhhcCccccc-----cC-CCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHH
Confidence 988877653221 11 125677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc-----CCCceEEecCCcceEEEeCCCCHH
Q 011080 205 CFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA-----GMIPLQMELGGKDACIILEDADLD 278 (494)
Q Consensus 205 ~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a-----~~~~~~le~gG~~~~iV~~daDl~ 278 (494)
+|.++|+|+|++|+|+|++.+ +..|+.||+|+.|+|||| .+|+.|.+.+ ..+|+++|+|||||+||++|||++
T Consensus 698 ll~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld 776 (1001)
T 3haz_A 698 LLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPE 776 (1001)
T ss_dssp HHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHH
Confidence 999999999999999998777 999999999999999999 9999998864 268999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcC
Q 011080 279 LAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKA 357 (494)
Q Consensus 279 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~G 357 (494)
.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+| ++++++||++++.+.+++.++|++++++|
T Consensus 777 ~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g 856 (1001)
T 3haz_A 777 QVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA 856 (1001)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999 88999999999999999999999999998
Q ss_pred CEEeecc-cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCC--HHHHHHHHhcCCCCceEEEeccCHHHHHHHHh
Q 011080 358 ATFCQEY-KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS--VEEGIHHCNASNFGLQGCVFTRDINKAILISD 434 (494)
Q Consensus 358 a~v~~~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~ 434 (494)
+++++. ...|+|+.|||+.. +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++.++++
T Consensus 857 -~v~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~ 933 (1001)
T 3haz_A 857 -RLHFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIID 933 (1001)
T ss_dssp -EEEEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHH
T ss_pred -eEeccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Confidence 775443 24599999999974 6788999999999999999997 79999999999999999999999999999999
Q ss_pred hcccceEEECCCCCCC-CCCCCccCccCCCCC-CcchHHHHHHhhceeEEEEecC
Q 011080 435 AMETGTVQINSAPSRG-PDHFPFQGLKDSGIG-SQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 435 ~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g-~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
++++|+|+||+.+... ...+||||+|.||+| +++|++++++|++.|+|+++..
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 9999999999987643 345799999999999 5789999999999999999854
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-81 Score=649.11 Aligned_cols=405 Identities=18% Similarity=0.153 Sum_probs=334.1
Q ss_pred EeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHh-------CCC
Q 011080 32 TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEI-------AKP 104 (494)
Q Consensus 32 ~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 104 (494)
.++||+||+++++++.++.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----HHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHH
Q 011080 105 AK----DAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPA 180 (494)
Q Consensus 105 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~a 180 (494)
+. +++.|+..+++.+++++..+.++.+..... ... ..+...++.++|+|||++|+||| |++.+ +++++|
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~--~~~---~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~A 162 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRR--TRI---AKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALA 162 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEE--EEE---ETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCccccc--ccC---CCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHH
Confidence 98 477899999999999998877766543110 000 01345688999999999999887 87777 899999
Q ss_pred hhcCCEEEEcCCCCChHHHHHHHHHHHHc----CCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcC
Q 011080 181 LIAGNSIVLKPPTQGAVAALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAG 255 (494)
Q Consensus 181 L~aGN~vvlkps~~~~~t~~~l~~~l~~a----GlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~ 255 (494)
|++||+||+|||+.+|+++.+|+++|.++ | |+|++|+|+| +.+++..|+.||+||.|+|||| .+|+.|.+.++
T Consensus 163 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 240 (463)
T 2h5g_A 163 IASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK 240 (463)
T ss_dssp HHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS
T ss_pred HHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC
Confidence 99999999999999999999999999999 9 9999999999 6788999999999999999999 99999999887
Q ss_pred CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCC
Q 011080 256 MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDIT 335 (494)
Q Consensus 256 ~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~g 335 (494)
++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++|||||++++| |
T Consensus 241 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------~ 295 (463)
T 2h5g_A 241 GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------T 295 (463)
T ss_dssp SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------S
T ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------h
Confidence 899999999999999999999999999999999999 999999999999999998 2
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEeeccc--CCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcC
Q 011080 336 PVVTESSANFIEGLVMDAKQKAATFCQEYK--REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNAS 413 (494)
Q Consensus 336 pl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 413 (494)
|+ +++++++++++|+++++|.. ..|+|+ +++|++++||+||||++|++|+|+||||+++|++
T Consensus 296 p~--------~~~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~ 359 (463)
T 2h5g_A 296 PL--------FDQIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKY 359 (463)
T ss_dssp HH--------HHHHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred HH--------HHHHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcC
Confidence 32 23357888889999975543 234443 5789999999999999999999999999999999
Q ss_pred CCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC--Cc--chHHHHHHhhceeEEEEecC
Q 011080 414 NFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG--SQ--GITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 414 ~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g--~~--~g~~~l~~~~~~k~i~~~~~ 487 (494)
++||+++|||+|.+++.++++++++|+|+||++.... ..+||||+|+||+| ++ +|.+|+++|++.|+|+++..
T Consensus 360 ~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 360 GSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFS-DGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp CCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGC-STTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred CCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCC-CCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 9999999999999999999999999999999876543 45999999999999 65 99999999999999998754
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-79 Score=631.94 Aligned_cols=401 Identities=16% Similarity=0.154 Sum_probs=323.4
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh----HHHH-HHHHH-HHHHHHHHHHH
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA----KDAV-TEVVR-SGDLVSYCAEE 125 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 125 (494)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. +.+.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999999 8885 89988 88999999988
Q ss_pred hHHHhcCccccccCCCCCC--CCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHH
Q 011080 126 GVRILGEGKLLVSDSFPGN--ERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV 203 (494)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~ 203 (494)
++++.....+. ....+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|+
T Consensus 95 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~ 171 (468)
T 1vlu_A 95 IKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMA 171 (468)
T ss_dssp HHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHhhcCCCC-CeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHH
Confidence 88876332110 0000100 01345688999999999999999 9 999999999999999999999999999999999
Q ss_pred HHHH----H----cCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCC
Q 011080 204 HCFH----L----AGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILED 274 (494)
Q Consensus 204 ~~l~----~----aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~d 274 (494)
+++. + +|+|+|++|+|+ ++.++++.|..||+||.|+|||| .+|+.+.+.+ .+|+++|+|||||+||++|
T Consensus 172 ~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a-~kpv~lElGGk~p~iV~~d 249 (468)
T 1vlu_A 172 KIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT-KIPVLGHADGICSIYLDED 249 (468)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC-CSCBTTBCSCCEEEEECTT
T ss_pred HHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc-CCCEEeecCCccceEECCC
Confidence 9995 8 999999999999 67688999999999999999999 9999999887 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc---CCCCCCCCCCccCCHHHHHHHHHH-H
Q 011080 275 ADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV---GAPEDDCDITPVVTESSANFIEGL-V 350 (494)
Q Consensus 275 aDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~-i 350 (494)
||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |||.+ .++ +
T Consensus 250 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~~i 311 (468)
T 1vlu_A 250 ADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTAYF 311 (468)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcccc
Confidence 9999999999999999999 99999999999999 9999999999999987 87621 334 5
Q ss_pred HHHHHcCCEE-eecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHH
Q 011080 351 MDAKQKAATF-CQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKA 429 (494)
Q Consensus 351 ~~a~~~Ga~v-~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~ 429 (494)
++++ ++ .+|. | +.||++ +++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 312 ~~a~----~~~~gG~---g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 380 (468)
T 1vlu_A 312 DKLN----ELGKLTE---A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANA 380 (468)
T ss_dssp HHHH----HHTCCCH---H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHH
T ss_pred cccc----eeeccCC---C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHH
Confidence 5554 23 3332 4 789987 788999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccceEEECCCCCCCCCCCCcc-----CccCCCCCCcchHHHHHHhhceeEEEEecCC
Q 011080 430 ILISDAMETGTVQINSAPSRGPDHFPFQ-----GLKDSGIGSQGITNSINMMTKIKSTVINLPT 488 (494)
Q Consensus 430 ~~~~~~~~~g~v~iN~~~~~~~~~~pfg-----G~~~SG~g~~~g~~~l~~~~~~k~i~~~~~~ 488 (494)
+++++++++|+|+||+++... ...||| |+|.||+|++ |.+|+++|++.|+|+++.+.
T Consensus 381 ~~~~~~l~aG~V~vN~~~~~~-~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~~ 442 (468)
T 1vlu_A 381 EKFMKGVDSSGVYWNASTRFA-DGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDGQ 442 (468)
T ss_dssp HHHHHHCCCSEEEESSCGGGC-C-----------------------CCSGGGEEEEEEEECSSC
T ss_pred HHHHHhCCeeEEEEcCCCCCC-CCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCCC
Confidence 999999999999999877544 448999 9999999999 99999999999999987543
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-78 Score=624.64 Aligned_cols=418 Identities=18% Similarity=0.198 Sum_probs=360.5
Q ss_pred EEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHH
Q 011080 44 RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYC 122 (494)
Q Consensus 44 ~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 122 (494)
+++.++.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. +.....+.+..+
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999999999999999999999999999999999999998764 333333332222
Q ss_pred HHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHH
Q 011080 123 AEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202 (494)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l 202 (494)
........ ..+ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+
T Consensus 85 -------~~~~~~~g--~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l 154 (464)
T 3k9d_A 85 -------IKDMKTIG--MLK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILET 154 (464)
T ss_dssp -------HTTCCCSE--EEE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred -------hhcccccc--eec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHH
Confidence 11111000 000 01245678889999999999999999999999999999999999999999999999886
Q ss_pred H----HHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecC-CcceEEEeCCCC
Q 011080 203 V----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELG-GKDACIILEDAD 276 (494)
Q Consensus 203 ~----~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~g-G~~~~iV~~daD 276 (494)
+ +++.++|+|+|++|+|++++.+.++.|++||+||+|+|||| ...+..+ ..+||+ +|+| ||+|+||++|||
T Consensus 155 ~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~--~~~kpv-lelG~G~~p~iV~~dAD 231 (464)
T 3k9d_A 155 VRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAY--SSGTPA-IGVGPGNGPAFIERSAN 231 (464)
T ss_dssp HHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHHHHHHT--TSSSCE-EEBCCCCCEEEECTTSC
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHHHHHHH--hcCCcE-EeeCCCCCeEEECCCCC
Confidence 5 45689999999999999988889999999999999999999 7543322 257998 7888 999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHH-------hccccCCC--CCCCCCCccCCHHHHHHHH
Q 011080 277 LDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKV-------AKLTVGAP--EDDCDITPVVTESSANFIE 347 (494)
Q Consensus 277 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~-------~~~~~g~p--~~~~~~gpl~~~~~~~~~~ 347 (494)
++.|++.+++|+|+|+||.|+++++||||+++||+|+++|++++ +.+++|+| ++++++||+++..+++++.
T Consensus 232 l~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~ 311 (464)
T 3k9d_A 232 IPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIA 311 (464)
T ss_dssp HHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999986 45678888 4588999999999999999
Q ss_pred HHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHH----HHHhcCCCCceEEEec
Q 011080 348 GLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI----HHCNASNFGLQGCVFT 423 (494)
Q Consensus 348 ~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~a~v~s 423 (494)
++++.++.+|++++.++.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 312 ~~~~~a~~~ga~vl~gg~~-----------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 312 NLAGLTVPADARVLIAEET-----------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp HHTTCCCCTTCCEEEEECC-----------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred HHhhhhhcCCCEEEEcCCC-----------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 9999888899998544321 567888865 89999999999999999997 7999999999999999
Q ss_pred cCHHHHHHHHhhcccceEEECCCCCC--------CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEecC
Q 011080 424 RDINKAILISDAMETGTVQINSAPSR--------GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 424 ~d~~~~~~~~~~~~~g~v~iN~~~~~--------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
+|.++++++++++++|+|+||+++.+ .++.+|||| +.+|.|+++|..|++.|++.|+|....+
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 99999999999999999999998752 345699998 6789999999999999999999987654
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-76 Score=612.35 Aligned_cols=391 Identities=18% Similarity=0.229 Sum_probs=329.7
Q ss_pred HHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChH----HHHH--------HHHHHHH
Q 011080 50 QEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK----DAVT--------EVVRSGD 117 (494)
Q Consensus 50 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~--------ev~~~~~ 117 (494)
.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+.. +++. |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999853 5553 6778888
Q ss_pred HHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChH
Q 011080 118 LVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAV 197 (494)
Q Consensus 118 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~ 197 (494)
.+++++...+. .+.. ..... ...+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+
T Consensus 105 ~l~~~a~~~~~-~g~~--~~~~~---~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~ 176 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEM--SNLKY---RPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALE 176 (444)
T ss_dssp HHHHHHHSCCC-TTCE--EEEEE---CTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHH
T ss_pred HHHHHHhhccc-cCcc--CCccc---CCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchH
Confidence 88887765432 1211 10000 012456789999999999999998 8 588999999999999999999999999
Q ss_pred HHHHHHHHH----HHcCCCCCcEEEecCCch-hhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEE
Q 011080 198 AALHMVHCF----HLAGFPKGLISCVTGKGS-EIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACII 271 (494)
Q Consensus 198 t~~~l~~~l----~~aGlP~g~i~~v~g~~~-~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV 271 (494)
++..|++++ .++|+|+|++|+++|++. +++..|..||+||.|+|||| .+|+.+++.+ .+|+++|+|||||+||
T Consensus 177 t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a-~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 177 SNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA-RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC-CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC-CCCEEEEcCCcCeEEE
Confidence 999999987 799999999999998655 57888999999999999999 9999998877 7999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhcccc---CCCCCCCCCCccCCHHHHHHHHH
Q 011080 272 LEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTV---GAPEDDCDITPVVTESSANFIEG 348 (494)
Q Consensus 272 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~ 348 (494)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |||. ..+
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~ 318 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARA 318 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHH
Confidence 9999999999999999999999 9999999999999999999999999999887 7652 135
Q ss_pred HHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHH
Q 011080 349 LVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINK 428 (494)
Q Consensus 349 ~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~ 428 (494)
+++++. . | ++ +++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++
T Consensus 319 ~i~~a~-~-----------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 319 VLEAAG-V-----------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHHTT-C-----------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHHhcc-c-----------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 555542 1 2 12 34678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCC----CcchHHHHHHhhceeEEEEecC
Q 011080 429 AILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG----SQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 429 ~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
+.++++++++|+|+||+++... +..||||.++||+| +++|++|+++||+.|+|+++.+
T Consensus 379 a~~~a~~l~aG~V~vN~~~~~~-~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~ 440 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTRFA-DGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHG 440 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGGGC-STTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEE
T ss_pred HHHHHHhCCcceEEEcCCCccC-CCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCC
Confidence 9999999999999999987654 45899999999998 6789999999999999998754
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-76 Score=608.06 Aligned_cols=389 Identities=17% Similarity=0.177 Sum_probs=339.3
Q ss_pred HHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh----HHHH--------HHHHHHHH
Q 011080 50 QEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPA----KDAV--------TEVVRSGD 117 (494)
Q Consensus 50 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 117 (494)
-+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999986 5654 68889999
Q ss_pred HHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChH
Q 011080 118 LVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAV 197 (494)
Q Consensus 118 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~ 197 (494)
.+++++...++ .+..... ... ..+...++.++|+|||++|+||| +.+.++++++||++||+||+|||+.+|+
T Consensus 93 ~l~~~a~~~~~-~g~~~~~--~~~---~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~ 164 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDS--WVR---EDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALN 164 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEE--EEC---TTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHH
T ss_pred HHHHHHhcccc-cCccccc--ccc---CCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHH
Confidence 99998775443 2221110 000 11345688999999999999886 4688899999999999999999999999
Q ss_pred HHHHHHHHHH----HcCCCCCcEEEecCC-chhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEE
Q 011080 198 AALHMVHCFH----LAGFPKGLISCVTGK-GSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACII 271 (494)
Q Consensus 198 t~~~l~~~l~----~aGlP~g~i~~v~g~-~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV 271 (494)
++.+|++++. ++|+|+|++|+++|+ ..+.++.|..||+++.|+|||| .+|+.+.+.+ .+|+++|+|||||+||
T Consensus 165 t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a-~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 165 SNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA-TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC-SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc-CCCEEEecCCCceEEE
Confidence 9999999997 789999999999984 4567899999999999999999 9999999888 6999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHH
Q 011080 272 LEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVM 351 (494)
Q Consensus 272 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 351 (494)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999987542
Q ss_pred HHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHH
Q 011080 352 DAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431 (494)
Q Consensus 352 ~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~ 431 (494)
+.++....+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus 298 --------~~gg~~~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 364 (427)
T 1o20_A 298 --------VRGCEKTRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 364 (427)
T ss_dssp --------EEECHHHHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred --------eecChhhhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHH
Confidence 111111112 33 885 34578899999999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEECCCCCCCCCCCCccCccCCCCC----CcchHHHHHHhhceeEEEEecC
Q 011080 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIG----SQGITNSINMMTKIKSTVINLP 487 (494)
Q Consensus 432 ~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~i~~~~~ 487 (494)
+++++++|+|+||++.... ...||||.|+||+| +++|++|+++|++.|+|+++.+
T Consensus 365 ~~~~l~~G~V~iN~~~~~~-~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 365 FVSEIDAAAVYVNASTRFT-DGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp HHHHCCSSEEEESSCGGGC-STTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HHHhCCccEEEECCCCccC-CCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 9999999999999876543 45899999999997 4679999999999999988764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-74 Score=599.22 Aligned_cols=413 Identities=18% Similarity=0.222 Sum_probs=334.8
Q ss_pred EeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHH
Q 011080 45 VQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT-EVVRSGDLVSYCA 123 (494)
Q Consensus 45 ~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~ 123 (494)
++.++.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+.+.+..
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~-- 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN-- 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH--
Confidence 357899999999999999999999999999999999999999999999999999999999999985 55555544421
Q ss_pred HHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHH
Q 011080 124 EEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMV 203 (494)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~ 203 (494)
++...... ...+. ......+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++
T Consensus 79 -----~~~~~~~~--g~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~ 150 (452)
T 3my7_A 79 -----KYKDEQTC--GILEE-DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAA 150 (452)
T ss_dssp -----HHTTCCCS--EEC--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred -----Hhhhcccc--ccccC-CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHH
Confidence 11111100 00111 12345678899999999999999999999999999999999999999999999999888
Q ss_pred HHHH----HcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeCCCCHH
Q 011080 204 HCFH----LAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILEDADLD 278 (494)
Q Consensus 204 ~~l~----~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~daDl~ 278 (494)
+++. ++|+|+|++|+|++++.+.++.|++||+|++|+|||| ..++..+ ...||+++|+|||+|+||++|||++
T Consensus 151 ~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~~a~--~~~kp~~~e~gG~~p~iV~~dADl~ 228 (452)
T 3my7_A 151 KLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAY--SSGKPAIGVGAGNVPVVIDETADIK 228 (452)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHHHHH--TSSSCEEECC--CEEEEECTTSCHH
T ss_pred HHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHHHHH--hcCCCEEecCCCCCeEEEeCCCCHH
Confidence 8765 7999999999999988899999999999999999999 7655322 3579999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCC
Q 011080 279 LAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAA 358 (494)
Q Consensus 279 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga 358 (494)
.|++.+++|+|+|+||.|+++++||||+++||+|+++|+++ .||++++.+.+++.++++++...|+
T Consensus 229 ~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 229 RAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 99999999999999999999999999999999999999864 3899999999999999987666777
Q ss_pred EEeeccc-----CCCceeecEE-------EeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCC----CCceEEEe
Q 011080 359 TFCQEYK-----REGNLIWPLL-------LDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN----FGLQGCVF 422 (494)
Q Consensus 359 ~v~~~~~-----~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a~v~ 422 (494)
+++++.. ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 295 ~v~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 295 KIVGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp GGTTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred eEecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 7764432 3589999997 567888999875 89999999999999999999999974 99999999
Q ss_pred ccCHHHHHH---HHhhcccceEEECCCCCCCCCCCCcc-CccC---CCCCCcch-----HHHHHHhhceeEEEE
Q 011080 423 TRDINKAIL---ISDAMETGTVQINSAPSRGPDHFPFQ-GLKD---SGIGSQGI-----TNSINMMTKIKSTVI 484 (494)
Q Consensus 423 s~d~~~~~~---~~~~~~~g~v~iN~~~~~~~~~~pfg-G~~~---SG~g~~~g-----~~~l~~~~~~k~i~~ 484 (494)
|+|.+.+++ +++++++|+|+||+++.++..+.-+. +... -|+|++|| .-+.+.+.+.|+|..
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC----------------------------CCCCCGGGGEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEe
Confidence 999877777 99999999999998754322111111 1111 15555544 347788888888754
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.056 Score=53.39 Aligned_cols=254 Identities=15% Similarity=0.206 Sum_probs=138.9
Q ss_pred CceEEEEeeeceeEEeeCCCC---chHHHHHhhHHHHhhcCCE--EEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecC
Q 011080 147 TKYCLTSKIPLGVVLAIPPFN---YPVNLAVSKIAPALIAGNS--IVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTG 221 (494)
Q Consensus 147 ~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~aL~aGN~--vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g 221 (494)
+.....++.|+--|++..|.- ||-..+ ...+||-.+|.. |+.-|.+.... ...+.-+...+|+.+ +--+ |
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G~i-~p~iL~AA~l~Gv~e--Iy~v-G 194 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRGEL-NALVLAAAYISGVDR--VFRI-G 194 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGGCC-CHHHHHHHHHHTCCE--EECC-C
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCCCc-cHHHHHHHHhcCCcE--EEEc-C
Confidence 566677889999999999944 665544 457899999986 33455443222 222334456677754 2222 2
Q ss_pred CchhhHhhhhh----CCCccEEEEecc-HHHHHHHHH--cCCCceEEecCCcce--EEEeCCCCHHHHHHHHHHHHhhcc
Q 011080 222 KGSEIGDFLTM----HPSINCISFTGG-DTGISISKK--AGMIPLQMELGGKDA--CIILEDADLDLAAANIVKGGFSYS 292 (494)
Q Consensus 222 ~~~~~~~~L~~----~~~v~~v~ftGs-~~~~~v~~~--a~~~~~~le~gG~~~--~iV~~daDl~~aa~~i~~~~~~~~ 292 (494)
|.+.-.+|.- -|.||.|+=.|. -+. .+++ .+..-+=+.- |-+= +|-++++|.+..+..++.-+=+..
T Consensus 195 -GAQAIAAlAyGTetI~~VDkIvGPGN~yVa--~AKr~v~g~VgIDm~A-GPSEilViAD~~a~p~~vAaDLlsQAEHd~ 270 (423)
T 4gic_A 195 -GAQAVAALAYGTETVPRVDKIVGPGNIYVA--TAKKLVFGQVGIDMVA-GPSEILVISDGRTDPDWIAMDLFSQAEHDE 270 (423)
T ss_dssp -HHHHHHHHHHCCSSSCCCSEEECCCCHHHH--HHHHHHBTTBEECCCC-CCCEEEEEECSCSCHHHHHHHHHHHHTTCT
T ss_pred -ChhhhhhhccCCCcccceeEEecCCcHHHH--HHHHHhcCCcCccccc-ccceEEEEeCCCCCHHHHHHHHHHhhccCC
Confidence 3333233332 578999986776 222 2222 2322222222 3332 344456899998888877654433
Q ss_pred CCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHH-cCCEEeecccCCCc
Q 011080 293 GQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQ-KAATFCQEYKREGN 369 (494)
Q Consensus 293 Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~~~~~~g~ 369 (494)
. .+.++|..+ ..++..+++.+.++.+. .. +.+..+.. .|
T Consensus 271 ----~-a~~iLvT~s~~la~~V~~~i~~~l~~l~--------------r~-------~i~~~sl~~~g------------ 312 (423)
T 4gic_A 271 ----D-AQAILISPDAAHLEAVQASIERLLPGME--------------RA-------EVIRTSLERRG------------ 312 (423)
T ss_dssp ----T-CEEEEEESCHHHHHHHHHHHHHHGGGCT--------------TH-------HHHHHHHHHHC------------
T ss_pred ----C-CeEEEEeCcHHHHHHHHHHHHHHHhhCc--------------cH-------HHHHHHHhcCc------------
Confidence 2 344566554 23344444444444331 11 12222221 12
Q ss_pred eeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcc-cceEEECCCCC
Q 011080 370 LIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAME-TGTVQINSAPS 448 (494)
Q Consensus 370 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~-~g~v~iN~~~~ 448 (494)
.++.++|++|+++++|..-.= ..-|.++|+. .+..+++ +|.|++..++.
T Consensus 313 --------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG~~tp 362 (423)
T 4gic_A 313 --------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMGRYTA 362 (423)
T ss_dssp --------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC----
T ss_pred --------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecCCCCc
Confidence 245679999999999995443 5677888864 5666765 99999988654
Q ss_pred C--------CCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 449 R--------GPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 449 ~--------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
- .+.-+|.+|. .|..+.-+...|.+.-++
T Consensus 363 ~~~GDY~aG~NHvLPT~G~-----Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 363 EALGDYCAGPNHVLPTSGT-----ARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp ------------CCCCTTG-----GGTCCCCCGGGGEEEEEE
T ss_pred hhhhhcCcCCCccCCCCCc-----ccccCCCCHHHeeeeeeE
Confidence 1 1222555554 444444566777765443
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.21 Score=49.47 Aligned_cols=324 Identities=16% Similarity=0.150 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHcHHHHHHHHHHHhCCCh----HHHHHHHH--------HHHHHHHHHHHHhHHHhcCccccccCCC
Q 011080 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPA----KDAVTEVV--------RSGDLVSYCAEEGVRILGEGKLLVSDSF 141 (494)
Q Consensus 74 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~ev~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 141 (494)
+-.+..+.+.+.++.+.|+-....++...+.. .-...|+. ...+.++...+..++.+....+. +..
T Consensus 31 ~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~--~~~ 108 (434)
T 1kae_A 31 SITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLP--PVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCC--CEE
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC--Cce
Confidence 44455556666666666555444444433211 11112222 12333444445555555443221 000
Q ss_pred CCCCCCceEEEEeeeceeEEeeCCC---CchHHHHHhhHHHHhhcCCEEEE--cCCCCChHHHHHHHHHHHHcCCCCCcE
Q 011080 142 PGNERTKYCLTSKIPLGVVLAIPPF---NYPVNLAVSKIAPALIAGNSIVL--KPPTQGAVAALHMVHCFHLAGFPKGLI 216 (494)
Q Consensus 142 ~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~aL~aGN~vvl--kps~~~~~t~~~l~~~l~~aGlP~g~i 216 (494)
.....+.....++.|+.-|++..|. -||-..+ ...+||-.+|+.=|+ -|..-.| .+.-+.+.+|+.+ |
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e--I 181 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD--V 181 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHH-HHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE--E
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCchhHHH-HhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE--E
Confidence 0012245566778899999999996 4665444 457899999987554 4432222 2333456777754 3
Q ss_pred EEecCCchhhHhhhh----hCCCccEEEEecc---HHHHHHHHH-cCCCceEEecCCcce--EEEeCCCCHHHHHHHHHH
Q 011080 217 SCVTGKGSEIGDFLT----MHPSINCISFTGG---DTGISISKK-AGMIPLQMELGGKDA--CIILEDADLDLAAANIVK 286 (494)
Q Consensus 217 ~~v~g~~~~~~~~L~----~~~~v~~v~ftGs---~~~~~v~~~-a~~~~~~le~gG~~~--~iV~~daDl~~aa~~i~~ 286 (494)
--+ | |.+.-.+|. .-|.||.|+=.|. ..++++... .+..-+=+.- |-+= +|-+++||.+..+..++.
T Consensus 182 y~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~VgIDm~A-GPSEilViAD~tAnp~~vAaDLLs 258 (434)
T 1kae_A 182 FNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPA-GPSEVLVIADSGATPDFVASDLLS 258 (434)
T ss_dssp EEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCEESCCC-CCCEEEEEECTTSCHHHHHHHHHH
T ss_pred eec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccccCCCC-CCceEEEEeCCCCCHHHHHHHHHH
Confidence 323 2 333222222 2578999987777 234444321 2211111111 3333 344556899998888877
Q ss_pred HHhhccCCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc
Q 011080 287 GGFSYSGQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY 364 (494)
Q Consensus 287 ~~~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~ 364 (494)
-+=... . .+.++|..+ ..++..+++.+.+..+. . .+.++.+.
T Consensus 259 QAEHd~----~-a~aiLvT~s~~la~~V~~ev~~ql~~lp--------------r-------~~ia~~sl---------- 302 (434)
T 1kae_A 259 QAEHGP----D-SQVILLTPAADMARRVAEAVERQLAELP--------------R-------AETARQAL---------- 302 (434)
T ss_dssp HHTTCT----T-CEEEEEESCHHHHHHHHHHHHHHHTTCT--------------T-------HHHHHHHH----------
T ss_pred HhccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHhCC--------------h-------HHHHHHHH----------
Confidence 654332 3 344555554 23444444444444331 1 11222222
Q ss_pred cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEEE
Q 011080 365 KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQI 443 (494)
Q Consensus 365 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~i 443 (494)
..- .++.++|++||++++|..-.= ..-|.++|+ +.+..++ ++|.|++
T Consensus 303 ---------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~nAGaIFl 350 (434)
T 1kae_A 303 ---------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSVFL 350 (434)
T ss_dssp ---------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCSCSEEEE
T ss_pred ---------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCcccchhc
Confidence 112 466789999999999995443 577888887 4556666 5999999
Q ss_pred CCCCC--------CCCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 444 NSAPS--------RGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 444 N~~~~--------~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
..++. +.+.-+|-+|.- |..+.-+.+.|++.-++
T Consensus 351 G~~tpe~~GDY~aG~NHvLPT~G~A-----R~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 351 GDWSPESAGDYASGTNHVLPTYGYT-----ATCSSLGLADFQKRMTV 392 (434)
T ss_dssp STTCCHHHHHHTSSSCCCCCCTTGG-----GTCCCSCGGGGEEEEEE
T ss_pred CCCCchhhcccccCCCcccCCCCce-----eccCCCcHHhccceeeE
Confidence 98765 123336766654 33344566677765443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 494 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-122 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-119 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-112 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-106 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 7e-96 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 8e-88 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-86 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-73 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-41 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-41 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 8e-26 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 364 bits (936), Expect = e-122
Identities = 139/485 (28%), Positives = 227/485 (46%), Gaps = 21/485 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
+ F + W + S K+ +NP+T + +V +E+V+K V+ A+ A + W +
Sbjct: 15 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 74
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRIL 130
R LL++ A +++ + +A + KP + ++ + Y A +
Sbjct: 75 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 134
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G+ + D F T P+GV I P+N+P+ + K+ PAL GN +V+K
Sbjct: 135 GKTIPIDGDFF--------SYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
Q + AL++ + AGFP G+++ V G G G + H ++ ++FTG + G
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 250 ISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
I AG + + +ELGGK II+ DAD+D A F GQ A V E
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 306
Query: 307 SVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFC---Q 362
+ D VE+ A+ VG P D + P V E+ I G + KQ+ A
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
G I P + +V+ M IA EE FGPV+ +++ ++EE + N S +GL VF
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T+D++KA +S A++ GTV +N G PF G K SG G + + T++K+
Sbjct: 427 TKDLDKANYLSQALQAGTVWVNCYDVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTV 485
Query: 483 VINLP 487
+ +P
Sbjct: 486 TVKVP 490
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 358 bits (919), Expect = e-119
Identities = 146/485 (30%), Positives = 232/485 (47%), Gaps = 21/485 (4%)
Query: 15 KFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTP 71
K F + W S SGK + NP T + V+ +E+V+K V+ A+ A + W
Sbjct: 15 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMD 74
Query: 72 LWKRAELLHKAAAILKEQKAPIAECLVKEIAKP-AKDAVTEVVRSGDLVSYCAEEGVRIL 130
+R LL+K A +++ + +A K + + ++ + YCA +I
Sbjct: 75 ASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQ 134
Query: 131 GEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLK 190
G + + T P+GV I P+N+P+ + + KI PAL GN++V+K
Sbjct: 135 GR--------TIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVK 186
Query: 191 PPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249
P Q + ALHM AGFP G+++ V G G G ++ H ++ ++FTG + G
Sbjct: 187 PAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246
Query: 250 ISKKAG---MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVME 306
I + AG + + +ELGGK CI+ DADLD A +G F + GQ C A V E
Sbjct: 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 306
Query: 307 SVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATFCQ--- 362
S+ D V + + K +G P P + + I L+ K++ A
Sbjct: 307 SIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 366
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
+ +G I P + +V DMRIA EE FGPV +++ S+++ I N + +GL +F
Sbjct: 367 PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 426
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
T DI+KAI +S A+++GTV +N S PF G K SG G + + T++K+
Sbjct: 427 TNDIDKAITVSSALQSGTVWVNC-YSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 485
Query: 483 VINLP 487
I +
Sbjct: 486 TIKIS 490
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 338 bits (868), Expect = e-112
Identities = 137/485 (28%), Positives = 231/485 (47%), Gaps = 24/485 (4%)
Query: 17 FYDGVWRKSSSGKSV-TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKR 75
++ G KS G + + P T + ++ C EEV++ V++A+ A W+K +R
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIER 82
Query: 76 AELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKL 135
+ ++ +AA I++E++ IA+ V K +A ++ + + Y A + G+
Sbjct: 83 SRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 136 LVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQG 195
L +F R V I +NYP +A K APAL GN++V KP
Sbjct: 143 LPGGAFAYTRREPLG--------VCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 194
Query: 196 AVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA 254
V + + FH AG P GL++ V G G+E G L HP++ +SFTG TG + + +
Sbjct: 195 PVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253
Query: 255 G--MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
+ + +ELGGK +I +D +L+ A + F GQ CT V +
Sbjct: 254 AKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF 313
Query: 313 VEKVKAKVAKLTVGAPEDDC-DITPVVTESSANFIEGLVMDAKQKAAT---------FCQ 362
+E+V + + VG P + ++++ + + G V AK++ A
Sbjct: 314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD 373
Query: 363 EYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 422
+ G + P +LDN R DM EE FGPV+ V+ ++ EE + N + FGL VF
Sbjct: 374 PKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVF 433
Query: 423 TRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482
TRDI++A ++ +E GT IN+ S P PF G K SG G + +++ +++K+
Sbjct: 434 TRDISRAHRVAANLEAGTCYINT-YSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTV 492
Query: 483 VINLP 487
++ +
Sbjct: 493 IVEMG 497
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 321 bits (824), Expect = e-106
Identities = 245/474 (51%), Positives = 315/474 (66%), Gaps = 5/474 (1%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
YK + +G W+ S + I P + V A + EEV+ V +AK AQ +W
Sbjct: 4 YKNYVNGEWK--LSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYI 61
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
+RA LHK A IL K I L KE+AK K AV+EVVR+ ++++Y AEEG+R+ EG
Sbjct: 62 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EG 119
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
++L SF + K + + P+G+VLAI PFNYPVNLA SKIAPALIAGN I KPPT
Sbjct: 120 EVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPT 179
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
QG+++ L + F AG P G+ + +TG+GSEIGD++ H ++N I+FTG G I K
Sbjct: 180 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239
Query: 253 KAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTL 312
AGM P+ +ELGGKD+ I+LEDADL+L A NI+ G F YSGQRCTAVK LVMESVAD L
Sbjct: 240 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 299
Query: 313 VEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIW 372
VEK++ KV LT+G PEDD DITP++ SA+++EGL+ DA K AT E KREGNLI
Sbjct: 300 VEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLIC 359
Query: 373 PLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILI 432
P+L D V DMR+AWEEPFGPVLP+IR+ SVEE I N S +GLQ +FT D +A I
Sbjct: 360 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 419
Query: 433 SDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486
++ +E GTV IN+ RG D+FPF G K SG G QG+ SI MT +KS V ++
Sbjct: 420 AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 296 bits (758), Expect = 7e-96
Identities = 137/480 (28%), Positives = 216/480 (45%), Gaps = 17/480 (3%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLW 73
+K +G S G+ + NP T + + E+V+ V A A W +T
Sbjct: 3 HKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 61
Query: 74 KRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEG 133
RAE L K A +++E AE + KP A + + + V R L
Sbjct: 62 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCL--- 118
Query: 134 KLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPT 193
+ + + PLGVV +I P+NYP+ +A K+APAL AGN +VLKP
Sbjct: 119 ---NGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSE 175
Query: 194 QGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISK 252
+ AL + FP G+++ + G+G +GD LT HP + +S TG TG I
Sbjct: 176 ITPLTALKLAELAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS 234
Query: 253 K--AGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVAD 310
+ + MELGGK I+ +DAD++ + G+ +GQ CTA + + D
Sbjct: 235 HTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYD 294
Query: 311 TLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQKAATF----CQEYK 365
TLVEK+ A VA L GAP+D ++ P+ + + + V +AK ++ K
Sbjct: 295 TLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK 354
Query: 366 REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRD 425
G P LL D I +E FGPV+ V ++ E+ ++ N S +GL V+T+D
Sbjct: 355 GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKD 414
Query: 426 INKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485
+ +A +S ++ G +N+ P G K SG G + T ++ ++
Sbjct: 415 VGRAHRVSARLQYGCTWVNT-HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 276 bits (705), Expect = 8e-88
Identities = 150/498 (30%), Positives = 230/498 (46%), Gaps = 14/498 (2%)
Query: 2 AVFEEIVDENG---VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVE 58
+ E ++ E G VY + G W SG+ + + +P +V + ++EEV + ++
Sbjct: 2 GLLEGVIKEKGGVPVYPSYLAGEW--GGSGQEIEVKSPIDLATIAKVISPSREEVERTLD 59
Query: 59 TAKLAQK-SWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGD 117
+ S P +R +L KAA I++ AE LV KP AV EV + D
Sbjct: 60 VLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVD 119
Query: 118 LVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 177
+ + +I G + + + L + PLGVV AI PFNYP+ AV+KI
Sbjct: 120 RLRLAELDLKKI---GGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKI 176
Query: 178 APALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSIN 237
+ I GN++V+KP + A V AGFP I+ + G E +
Sbjct: 177 TYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAA 236
Query: 238 CISFTGGDTGISISKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCT 297
+ G + K G+ MELGG D I+LEDADLDLAA I +G +SY+GQRC
Sbjct: 237 VSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 296
Query: 298 AVKVALVMESVADTLVEKVKAKVAKLTVGAPED-DCDITPVVTESSANFIEGLVMDAKQK 356
A+K+ L V LVE+V +++ L VG P D D+ P+++ S+ + + + DA +K
Sbjct: 297 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 356
Query: 357 AATFCQEYKREGNLIWPLLLD----NVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA 412
+R G L + DM + E F PV + + +++ I N
Sbjct: 357 GGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANG 416
Query: 413 SNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNS 472
+GL VF RD+ K +E G + IN P G ++PF G K SG+ +GI +
Sbjct: 417 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYA 476
Query: 473 INMMTKIKSTVINLPTPS 490
+ +T K+ V N
Sbjct: 477 VEAVTAYKTIVFNYKGKG 494
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 272 bits (697), Expect = 2e-86
Identities = 132/482 (27%), Positives = 218/482 (45%), Gaps = 22/482 (4%)
Query: 14 YKFFYDGVWRKSSSGKSVTIINP-TTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPL 72
Y + G W + + + +NP + + E +E A A K+W P
Sbjct: 38 YPLYIGGEWV--DTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQ 95
Query: 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGE 132
R+ LL KAAA+++ +K + LV E+ K +A +V + D + Y A +R
Sbjct: 96 EDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYP 155
Query: 133 GKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPP 192
+ + +PLG + I P+N+PV + I + GN+++ KP
Sbjct: 156 AV------EVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPA 209
Query: 193 TQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251
V + FH AGFP G+++ + G G E+G +L HP I I+FTG + G+ I
Sbjct: 210 EDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIY 269
Query: 252 KKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVAL 303
+ AG +E GGK+A I+ E AD DLAA +V + + GQ+C+A +
Sbjct: 270 EAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLI 329
Query: 304 VMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFC-- 361
+ + + ++E+V + +L+VG E++ D+ PVV+ + + K +
Sbjct: 330 LTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGG 389
Query: 362 QEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 421
+ + EG I P + V P RIA EE FGPVL VIR+ E + N + +GL G V
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 422 FTRDINKAILISDAMETGTVQINSAPSRGPDHF-PFQGLKDSGIGS-QGITNSINMMTKI 479
++R G + N + PF G K SG + G + + + ++
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
Query: 480 KS 481
K+
Sbjct: 510 KA 511
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 236 bits (602), Expect = 3e-73
Identities = 102/438 (23%), Positives = 173/438 (39%), Gaps = 15/438 (3%)
Query: 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDA-VTE 111
++ V+ A+ A S L R + L ++ E I+ L ++ K + E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 112 VVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171
V + + +E + + + ++ PLGVVL I +NYP N
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDD----LYIHSEPLGVVLVIGAWNYPFN 117
Query: 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLT 231
L + + A+ AGN+++LKP L + KG
Sbjct: 118 LTIQPMVGAVAAGNAVILKPSEVSGH---MADLLATLIPQYMDQNLYLVVKGGVPETTEL 174
Query: 232 MHPSINCISFTGG-DTGISISKKAG--MIPLQMELGGKDACIILEDADLDLAAANIVKGG 288
+ + I +TG G + A + P+ +ELGGK C + +D DLD+A I G
Sbjct: 175 LKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGK 234
Query: 289 FSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEG 348
F SGQ C A L S+ + +VEK+K + + D ++ + ++G
Sbjct: 235 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 349 LVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 408
L+ + K + I P +L +V P + EE FGPV+P++ + S+EE I
Sbjct: 295 LIDNQKVAHGGTWDQ---SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQ 351
Query: 409 HCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSR-GPDHFPFQGLKDSGIGSQ 467
N L VF+ + + +G V N PF G+ +SG+G+
Sbjct: 352 FINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 411
Query: 468 GITNSINMMTKIKSTVIN 485
S + +S ++
Sbjct: 412 HGKKSFETFSHRRSCLVK 429
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 153 bits (386), Expect = 1e-41
Identities = 87/468 (18%), Positives = 146/468 (31%), Gaps = 30/468 (6%)
Query: 27 SGKSVTIINPTTRKP-HFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAI 85
+ N T + T+ EVN+ A + + + KRA LL A+
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 86 LKEQKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNE 145
L+ + I E A P E+ R+ + + A+ +L + +
Sbjct: 61 LEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP 120
Query: 146 RTKY-CLTSKIPLGVVLAIPPFNYPV--NLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202
K +I LG V N+P+ + A A AL AG +++K T + +
Sbjct: 121 LPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180
Query: 203 VHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIP 258
C A P+ + + + G +G L HP I + FTG G
Sbjct: 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240
Query: 259 L-----QMELGGKDACIILEDADLDLA--AANIVKGGFSYSGQRCTAVKVALVMESVADT 311
ELG + I A A A V GQ CT V + +
Sbjct: 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQ 300
Query: 312 LVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLI 371
+ + + +TP + +S + + D E + +
Sbjct: 301 AFIETAQSL----IRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASAL 356
Query: 372 WPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFT--RDINKA 429
+ +N R EE FGP ++ +V + + L + D +
Sbjct: 357 FVTSSENWR-KHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQV 415
Query: 430 ILISDAMET--GTVQINSAP-----SRGPDHF-PFQGLKDSGIGSQGI 469
+ +E G + N P H P+ S S G
Sbjct: 416 SQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGA 463
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 151 bits (381), Expect = 2e-41
Identities = 62/447 (13%), Positives = 140/447 (31%), Gaps = 53/447 (11%)
Query: 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVT 110
+E+ + + + A ++ + + K A L E++ I E ++ K + V
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 111 EVVR-----SGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPP 165
E + + + + + K V + R +++ + +
Sbjct: 61 ESLVDRLALNDKRIDEMI-KACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGII 119
Query: 166 FNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAG-FPKGLISCVTGKGS 224
+ N+ V AL +GN+I+L+ + + +V A + S V +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 225 EIGDFLTMHPSINCISFTGGDTG---ISISKKAGMIPLQMELGGKDACIILEDADLDLAA 281
+ + G + + +E G + I ++++ A
Sbjct: 180 TDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKA 239
Query: 282 ANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTES 341
++ + C A + LV E +A + + ++ K V +
Sbjct: 240 VPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE---------- 289
Query: 342 SANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN 401
+ I P ++ D E ++ + +
Sbjct: 290 -------------------------KTREIVPDVVPATEDDWP---TEYLDLIIAIKVVK 321
Query: 402 SVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKD 461
+V+E I H + G + T + + A ++ V +N A +R D F +
Sbjct: 322 NVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN-ASTRFTDGGQFGFGAE 380
Query: 462 SGIGSQGITN----SINMMTKIKSTVI 484
GI +Q + +T K V+
Sbjct: 381 IGISTQRFHARGPVGLRELTTYKFVVL 407
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (267), Expect = 8e-26
Identities = 67/442 (15%), Positives = 132/442 (29%), Gaps = 60/442 (13%)
Query: 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKD---- 107
++ + A+ A R+++L+K LK I E ++A AK+
Sbjct: 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAV-AKETGLA 62
Query: 108 -------AVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVV 160
+ + + ++ + GK+ ++ L
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLL-- 120
Query: 161 LAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLA--------GFP 212
F + + A ++ +GN+ +LK + M + G P
Sbjct: 121 ---VIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVP 177
Query: 213 KGLISCVTGKGSEIGDFLTMHPSINCISFTGGDTGISISKKAGMIPLQMELGGKDACIIL 272
G + + ++ D L I+ + G + + K IP+ G + +
Sbjct: 178 VGSV-QLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLD 236
Query: 273 EDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDC 332
EDADL A + +Y + +
Sbjct: 237 EDADLIKAKRISLDAKTNYPAGCNAMETLLIN------------------------PKFS 272
Query: 333 DITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFG 392
V+ + + K A + + G L + V D +++ F
Sbjct: 273 KWWEVLENLTLEGGVTIHATKDLKTA-YFDKLNELGKLTEAIQCKTVDADEEQDFDKEFL 331
Query: 393 -PVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGP 451
L + S E I H N + + T + A +++ V N A +R
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN-ASTRFA 390
Query: 452 DHFPFQGLKDSGIGSQ-GITNS 472
D F + G G++ GI+ S
Sbjct: 391 DGFRY------GFGAEVGISTS 406
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 494 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.07 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.9e-102 Score=815.93 Aligned_cols=474 Identities=31% Similarity=0.484 Sum_probs=442.4
Q ss_pred cccCCc-ccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH---HhcCCCHHHHHHHHHHHH
Q 011080 8 VDENGV-YKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTPLWKRAELLHKAA 83 (494)
Q Consensus 8 ~~~~~~-~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a 83 (494)
-+.+++ .++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++
T Consensus 7 ~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia 86 (494)
T d1bxsa_ 7 TNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLA 86 (494)
T ss_dssp SSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred CCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence 344544 3799999999988889999999999999999999999999999999999985 699999999999999999
Q ss_pred HHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEe
Q 011080 84 AILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLA 162 (494)
Q Consensus 84 ~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 162 (494)
+.|++++++|++++++|+|||..++. .|+...++.+++++...++..++..+ . ..+...++.++|+|||++
T Consensus 87 ~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GVv~~ 158 (494)
T d1bxsa_ 87 DLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-------M-DGNFFTYTRSEPVGVCGQ 158 (494)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-------C-SSSEEEEEEEEECCEEEE
T ss_pred HHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeec-------C-CCCceeEEEEccEEEEEE
Confidence 99999999999999999999999875 68889999999999887765544321 1 235678899999999999
Q ss_pred eCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEe
Q 011080 163 IPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFT 242 (494)
Q Consensus 163 i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ft 242 (494)
|+|||||+.+.++++++||++||+||+|||+.+|.++.+|+++|.++|||+|++|+|+|++.++++.|++||+|+.|+||
T Consensus 159 I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fT 238 (494)
T d1bxsa_ 159 IIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFT 238 (494)
T ss_dssp ECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEE
T ss_pred EeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred cc-HHHHHHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHH
Q 011080 243 GG-DTGISISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKA 318 (494)
Q Consensus 243 Gs-~~~~~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 318 (494)
|| .+|+.|.+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++
T Consensus 239 GS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~ 318 (494)
T d1bxsa_ 239 GSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVE 318 (494)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHh
Confidence 99 9999998765 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc---cCCCceeecEEEeeCCCCCCCcccccccce
Q 011080 319 KVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY---KREGNLIWPLLLDNVRPDMRIAWEEPFGPV 394 (494)
Q Consensus 319 ~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 394 (494)
+++++++|+| ++++++||++++.+++++++++++|+++|+++..++ ..+|+|++|||+.++++++++++||+||||
T Consensus 319 ~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPv 398 (494)
T d1bxsa_ 319 RAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPV 398 (494)
T ss_dssp HHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSE
T ss_pred hhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCce
Confidence 9999999999 889999999999999999999999999999995432 357899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHH
Q 011080 395 LPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSIN 474 (494)
Q Consensus 395 l~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~ 474 (494)
++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+ .+||||+|.||+|+++|.+|++
T Consensus 399 l~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~-~~PfGG~~~SG~G~~~g~~~~~ 477 (494)
T d1bxsa_ 399 QQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSA-QCPFGGFKMSGNGRELGEYGFH 477 (494)
T ss_dssp EEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCT-TSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCC-CCCcCccccccCChhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999998776554 4899999999999999999999
Q ss_pred HhhceeEEEEecCCCC
Q 011080 475 MMTKIKSTVINLPTPS 490 (494)
Q Consensus 475 ~~~~~k~i~~~~~~~~ 490 (494)
+||+.|+|+++++.+.
T Consensus 478 ~ft~~k~i~~~~~~~~ 493 (494)
T d1bxsa_ 478 EYTEVKTVTIKISQKN 493 (494)
T ss_dssp TTEEEEEEEEECSCCC
T ss_pred HhcceEEEEEecCCCC
Confidence 9999999999987653
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=5.7e-101 Score=804.71 Aligned_cols=470 Identities=29% Similarity=0.490 Sum_probs=441.3
Q ss_pred ccceeCCeeeeCCCCCeE-EeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 14 YKFFYDGVWRKSSSGKSV-TIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 14 ~~~~i~g~~~~~~~~~~~-~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..+||||+|+.+.+|..+ +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 458999999988777665 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHH
Q 011080 93 IAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNL 172 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 172 (494)
|++++++|+|||+.+++.|+..+++.+++++....+..+..... ..+...++.++|+|||++|+|||||+.+
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~--------~~~~~~~~~~~P~GVv~~I~p~NfP~~~ 171 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL--------PGGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEEC--------GGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHhhhhcchhhhhhhhhhhhccccccccccccccccccc--------CCCcccccccccceeeecccCCCChHHH
Confidence 99999999999999999999999999999998877655543221 1256788999999999999999999999
Q ss_pred HHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHH
Q 011080 173 AVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISIS 251 (494)
Q Consensus 173 ~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~ 251 (494)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+|+.|+|||| .+|+.|.
T Consensus 172 ~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~ 250 (503)
T d1a4sa_ 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 6789999999999999999999 9999998
Q ss_pred HHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-
Q 011080 252 KKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP- 328 (494)
Q Consensus 252 ~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p- 328 (494)
+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|++++.+.++++++|+|
T Consensus 251 ~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~ 330 (503)
T d1a4sa_ 251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPL 330 (503)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccc
Confidence 876 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeeccc---------CCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 329 EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYK---------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 329 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~---------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
++.+++||++++.+++++++++++++++|++++.++. .+|+|++|||+.+++++|+++++|+||||++|++
T Consensus 331 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~ 410 (503)
T d1a4sa_ 331 LTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410 (503)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEE
Confidence 8899999999999999999999999999999953321 3689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhce
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKI 479 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~ 479 (494)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++... ..+||||+|.||+|+++|.+|+++||+.
T Consensus 411 ~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~~l~~~t~~ 489 (503)
T d1a4sa_ 411 FDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP-VEVPFGGYKMSGFGRENGQATVDYYSQL 489 (503)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC-TTSCBCCSGGGEECCBSTTGGGGGSEEE
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC-CCCCccCcccCcCCcchHHHHHHHhhCe
Confidence 999999999999999999999999999999999999999999999987755 4599999999999999999999999999
Q ss_pred eEEEEecCCCCCCC
Q 011080 480 KSTVINLPTPSYTV 493 (494)
Q Consensus 480 k~i~~~~~~~~~~~ 493 (494)
|+|++++..-.++|
T Consensus 490 k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 490 KTVIVEMGDVDSLF 503 (503)
T ss_dssp EEEEECCSCCCCCC
T ss_pred EEEEEcCCCCCCCC
Confidence 99999987766655
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=3.6e-101 Score=805.71 Aligned_cols=469 Identities=29% Similarity=0.456 Sum_probs=440.1
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH---HhcCCCHHHHHHHHHHHHHHHHHc
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK---SWAKTPLWKRAELLHKAAAILKEQ 89 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~ 89 (494)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 13 ~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~ 92 (494)
T d1o04a_ 13 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHh
Confidence 34789999999987888999999999999999999999999999999999985 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCc
Q 011080 90 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNY 168 (494)
Q Consensus 90 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~ 168 (494)
+++|++++++|+|||..++. .|+..+++.+++++....+..++..+ . ..+...++.++|+|||++|+||||
T Consensus 93 ~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-------~-~~~~~~~~~~~P~GVv~~I~P~N~ 164 (494)
T d1o04a_ 93 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-------I-DGDFFSYTRHEPVGVCGQIIPWNF 164 (494)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-------C-SSSEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceec-------c-CCCceeEEEEecccEEEEECCccc
Confidence 99999999999999999986 59999999999999887766554321 1 224667889999999999999999
Q ss_pred hHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHH
Q 011080 169 PVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTG 247 (494)
Q Consensus 169 P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~ 247 (494)
|+.+.++++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.|||| .+|
T Consensus 165 P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g 244 (494)
T d1o04a_ 165 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 244 (494)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999988889999999999999999999 999
Q ss_pred HHHHHHc---CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccc
Q 011080 248 ISISKKA---GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLT 324 (494)
Q Consensus 248 ~~v~~~a---~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~ 324 (494)
+.+.+.+ .++|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|+++++++++.++
T Consensus 245 ~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~ 324 (494)
T d1o04a_ 245 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRV 324 (494)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhhee
Confidence 9997764 4799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEee-cc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEec
Q 011080 325 VGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQ-EY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 400 (494)
Q Consensus 325 ~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~-~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 400 (494)
+|+| ++++++||++++.+++++.+++++|+++|++++. |. .+.|+|++|||+.++++++++++||+||||++|++|
T Consensus 325 ~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~ 404 (494)
T d1o04a_ 325 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF 404 (494)
T ss_dssp BCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEe
Confidence 9999 8899999999999999999999999999999954 32 346899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhcee
Q 011080 401 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIK 480 (494)
Q Consensus 401 ~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k 480 (494)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++...+ .+||||+|.||+|+++|.+|+++||+.|
T Consensus 405 ~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~-~~PfGG~~~SG~G~~~g~~~~~~ft~~k 483 (494)
T d1o04a_ 405 KTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA-QSPFGGYKMSGSGRELGEYGLQAYTEVK 483 (494)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCT-TSCBCCSGGGEESCBSTGGGGGGGEEEE
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCC-CCCcCCcccccCCchhHHHHHHHhcCeE
Confidence 999999999999999999999999999999999999999999998877654 4899999999999999999999999999
Q ss_pred EEEEecCCCC
Q 011080 481 STVINLPTPS 490 (494)
Q Consensus 481 ~i~~~~~~~~ 490 (494)
+|++++|.+.
T Consensus 484 ~v~~~~p~k~ 493 (494)
T d1o04a_ 484 TVTVKVPQKN 493 (494)
T ss_dssp EEEEECSCCC
T ss_pred EEEEeCCCCC
Confidence 9999988764
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-99 Score=789.30 Aligned_cols=464 Identities=29% Similarity=0.436 Sum_probs=425.6
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAP 92 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 92 (494)
..++||||+|+.+ +++.++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 5689999999976 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHH-HHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 93 IAECLVKEIAKPAKDAVTEV-VRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 93 l~~~~~~e~Gk~~~~a~~ev-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
|+++++.|+|||+.++..+. ......+++++........... +....+...+++++|+|||++|+|||||+.
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~ 153 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA-------GEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECB-------EEEETTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHhCCChhHhhhccccccccccccccccccccccccc-------ccccCCcceEEEEecccceEEEeecchHhh
Confidence 99999999999999997654 4455555555443322221111 111235678899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
+.++++++||++||+||+|||+.+|+++.++++++++ ++|+|++|+|+|++.++++.|++||+|++|.|||| .+|+.+
T Consensus 154 ~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i 232 (474)
T d1wnda_ 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHI 232 (474)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred hhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHH
Confidence 9999999999999999999999999999999998876 59999999999988899999999999999999999 999999
Q ss_pred HHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC
Q 011080 251 SKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP 328 (494)
Q Consensus 251 ~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p 328 (494)
.+.+ .+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++.++++++|+|
T Consensus 233 ~~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~ 312 (474)
T d1wnda_ 233 ISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 312 (474)
T ss_dssp HHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCT
T ss_pred HHhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCc
Confidence 9876 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCccCCHHHHHHHHHHHHHHHHcCCE-Eeecc---cCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCH
Q 011080 329 -EDDCDITPVVTESSANFIEGLVMDAKQKAAT-FCQEY---KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSV 403 (494)
Q Consensus 329 -~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~-v~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 403 (494)
++++.+||++++.+.+++.+++++++.+|+. +.+|. ..+|+|+.|||+.++++++++++||+||||++|++|+|+
T Consensus 313 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~ 392 (474)
T d1wnda_ 313 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392 (474)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCH
Confidence 7899999999999999999999999999985 45443 347899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEE
Q 011080 404 EEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTV 483 (494)
Q Consensus 404 ~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~ 483 (494)
||||+++|+++|||+++|||+|.++++++++++++|+|+||++.... +.+||||+|+||+|+++|.+|+++||+.|+|+
T Consensus 393 deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~ 471 (474)
T d1wnda_ 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLV-SEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471 (474)
T ss_dssp HHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCC-TTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCcc-CCCCcccccccccCccCHHHHHHHcCCEEEEE
Confidence 99999999999999999999999999999999999999999987654 45999999999999999999999999999999
Q ss_pred Eec
Q 011080 484 INL 486 (494)
Q Consensus 484 ~~~ 486 (494)
|+|
T Consensus 472 i~~ 474 (474)
T d1wnda_ 472 VKH 474 (474)
T ss_dssp EEC
T ss_pred EeC
Confidence 985
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-97 Score=782.66 Aligned_cols=467 Identities=28% Similarity=0.486 Sum_probs=433.5
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCC-CCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPT-TRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQK 90 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 90 (494)
..+++||||+|+.+ +..++++||. ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 57899999999975 4578899996 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchH
Q 011080 91 APIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPV 170 (494)
Q Consensus 91 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 170 (494)
++|++++++|+|||..+++.|+.++++.+++++..+.......... ....+...+..++|+|||++|+|||||+
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~------~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl 187 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV------VPYPGEDNESFYVPLGAGVVIAPWNFPV 187 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCC------CCCTTEEEEEEEEECCEEEEECCSSSTT
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhccccc------ccccccceeEEeeccCcccccccccccc
Confidence 9999999999999999999999999999999998877665443211 1123566778899999999999999999
Q ss_pred HHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHH
Q 011080 171 NLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGIS 249 (494)
Q Consensus 171 ~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~ 249 (494)
.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|+.|.|||| .+|+.
T Consensus 188 ~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~ 267 (516)
T d1uzba_ 188 AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267 (516)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred ccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999 99999
Q ss_pred HHHHcC--------CCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHh
Q 011080 250 ISKKAG--------MIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVA 321 (494)
Q Consensus 250 v~~~a~--------~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 321 (494)
+++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++
T Consensus 268 i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~ 347 (516)
T d1uzba_ 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAE 347 (516)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHH
Confidence 998753 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc--cCCCceeecEEEeeCCCCCCCcccccccceeeeEe
Q 011080 322 KLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY--KREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 399 (494)
Q Consensus 322 ~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~ 399 (494)
++++|+.++.+++||+++..+.+++.+++++|+++|+.+++|. +.+|+|+.|||+.++++++++++||+||||++|++
T Consensus 348 ~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~ 427 (516)
T d1uzba_ 348 RLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp TCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred hcccCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEE
Confidence 9999944778999999999999999999999999999887664 35789999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCC-CCCCCccCccCCCCCCcc-hHHHHHHhh
Q 011080 400 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRG-PDHFPFQGLKDSGIGSQG-ITNSINMMT 477 (494)
Q Consensus 400 ~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~~~-g~~~l~~~~ 477 (494)
|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++++.. ...+||||+|.||+|+++ +.+++++||
T Consensus 428 ~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~ 507 (516)
T d1uzba_ 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFL 507 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTE
T ss_pred eCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhC
Confidence 999999999999999999999999999999999999999999999987633 345899999999999985 589999999
Q ss_pred ceeEEEEec
Q 011080 478 KIKSTVINL 486 (494)
Q Consensus 478 ~~k~i~~~~ 486 (494)
+.|+|+.++
T Consensus 508 ~~k~v~~r~ 516 (516)
T d1uzba_ 508 EMKAVAERF 516 (516)
T ss_dssp EEEEEEEEC
T ss_pred CeeeEEEcC
Confidence 999998654
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.7e-93 Score=747.89 Aligned_cols=471 Identities=31% Similarity=0.483 Sum_probs=431.4
Q ss_pred cccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhH-HhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 13 VYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQK-SWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 13 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
.+++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|+++++ .|+.+|..+|.++|+++++.|+++++
T Consensus 16 ~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 93 (499)
T d1ky8a_ 16 VYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 93 (499)
T ss_dssp EECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 478999999985 567999999999999999999999999999999988877 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||..+++.|+.++++.+++++...++..+..... ..+........++.|+|+|||++|+|||||+.
T Consensus 94 ~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 94 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG---DWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEES---TTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceecc---ccccccccccceeeeeccccccccccccccch
Confidence 999999999999999999999999999999887766654432211 11222335677899999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
++++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.+++ +.+..|+.||.++.+.|||| ..++.+
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i 249 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERV 249 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEE
Confidence 9999999999999999999999999999999999999999999999999865 56788999999999999999 999999
Q ss_pred HHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-C
Q 011080 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-E 329 (494)
Q Consensus 251 ~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~ 329 (494)
.+.++.+|+++|+|||||+||++|||++.|++.+++++|+++||.|+++++++||++++|+|+++|+++++++++|+| +
T Consensus 250 ~~~~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~ 329 (499)
T d1ky8a_ 250 VKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 329 (499)
T ss_dssp HHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred eecccccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCC
Confidence 998888999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecc-cCCCceeecEEEe---eCCCCCCCcccccccceeeeEecCCHHH
Q 011080 330 DDCDITPVVTESSANFIEGLVMDAKQKAATFCQEY-KREGNLIWPLLLD---NVRPDMRIAWEEPFGPVLPVIRINSVEE 405 (494)
Q Consensus 330 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~-~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~e 405 (494)
+++++||++++.+.+++++++++|+++|++++.++ .....+..++++. ++++|+++++||+||||++|++|+|+||
T Consensus 330 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~e 409 (499)
T d1ky8a_ 330 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQ 409 (499)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhhccccCceEEEEEcCCHHH
Confidence 89999999999999999999999999999996543 3334444444443 4567899999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEe
Q 011080 406 GIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVIN 485 (494)
Q Consensus 406 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~ 485 (494)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++++...+.+||||+|+||+|+++|.+|+++||+.|+|+++
T Consensus 410 ai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 489 (499)
T d1ky8a_ 410 AIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFN 489 (499)
T ss_dssp HHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEE
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEc
Confidence 99999999999999999999999999999999999999998887666799999999999999999999999999999999
Q ss_pred cCCC
Q 011080 486 LPTP 489 (494)
Q Consensus 486 ~~~~ 489 (494)
+..+
T Consensus 490 ~~~~ 493 (499)
T d1ky8a_ 490 YKGK 493 (499)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7544
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.5e-92 Score=739.82 Aligned_cols=471 Identities=52% Similarity=0.836 Sum_probs=438.2
Q ss_pred CcccceeCCeeeeCCCCCeEEeeCCCCCCceEEEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHH
Q 011080 12 GVYKFFYDGVWRKSSSGKSVTIINPTTRKPHFRVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKA 91 (494)
Q Consensus 12 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 91 (494)
+.|+|||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++|++.|+.+|.++|.++|+++++.|+++++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~ 79 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE 79 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 57899999999864 5689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHH
Q 011080 92 PIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVN 171 (494)
Q Consensus 92 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 171 (494)
+|++++++|+|||..+++.|+...+..++++.............. ...+....+...+++++|+|||++|+|||||+.
T Consensus 80 ~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~ 157 (474)
T d1euha_ 80 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG--GSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 157 (474)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEG--GGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccc--cccccccCCceeEEEeeceeEEEEeccccccch
Confidence 999999999999999999999999999998877654433221111 111222335667889999999999999999999
Q ss_pred HHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHH
Q 011080 172 LAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISI 250 (494)
Q Consensus 172 ~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v 250 (494)
..++.+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++.++++.|..||+|+.|.|||| .+++.+
T Consensus 158 ~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i 237 (474)
T d1euha_ 158 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 237 (474)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccch
Confidence 9999999999999999999999999999999999999999999999999988899999999999999999999 999999
Q ss_pred HHHcCCCceEEecCCcceEEEeCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCC
Q 011080 251 SKKAGMIPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPED 330 (494)
Q Consensus 251 ~~~a~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~ 330 (494)
.+.++.+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.++++...++.|++.+
T Consensus 238 ~~~a~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 317 (474)
T d1euha_ 238 GKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 317 (474)
T ss_dssp HHHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred hhhcccceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCccc
Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999966
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHH
Q 011080 331 DCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 410 (494)
Q Consensus 331 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 410 (494)
...++|.+.....+++...+..+...++.........|+|++|||+..+++++++++||+||||++|++|+|+||||+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~ 397 (474)
T d1euha_ 318 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEIS 397 (474)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHhhhcccccccccCCCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHH
Confidence 67799999999999999999999999988876666789999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCCCCCCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 411 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 411 n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
|+++|||+++|||+|.+.++++++++++|+|+||+++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 398 n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 398 NKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 473 (474)
T ss_dssp HHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEec
Confidence 9999999999999999999999999999999999987666667999999999999999999999999999999875
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-83 Score=663.78 Aligned_cols=423 Identities=25% Similarity=0.371 Sum_probs=380.0
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHHhHHHhc
Q 011080 53 VNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAV-TEVVRSGDLVSYCAEEGVRILG 131 (494)
Q Consensus 53 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 131 (494)
|++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+++.++++++....+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 6899999999999887777655
Q ss_pred CccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHHHHHHHHcCC
Q 011080 132 EGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGF 211 (494)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l~~~l~~aGl 211 (494)
..... ..........++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.. ++
T Consensus 82 ~~~~~----~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~ 156 (446)
T d1ad3a_ 82 DEPVA----KTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YM 156 (446)
T ss_dssp CEECC----CCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HS
T ss_pred ccccc----cCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cc
Confidence 42211 11223356678899999999999999999999999999999999999999999999999999998866 68
Q ss_pred CCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CCCceEEecCCcceEEEeCCCCHHHHHHHHHHHH
Q 011080 212 PKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GMIPLQMELGGKDACIILEDADLDLAAANIVKGG 288 (494)
Q Consensus 212 P~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~~~~~le~gG~~~~iV~~daDl~~aa~~i~~~~ 288 (494)
|+++++++.+.+... ..+. ++.++.|+|||| .+|+.+.+.+ ..+|+++|+|||||+||++|||++.|++.+++++
T Consensus 157 ~~~~~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~ 234 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGK 234 (446)
T ss_dssp CTTTEEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHH
T ss_pred cccccccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHH
Confidence 999999999865444 3444 567999999999 9999999876 4799999999999999999999999999999999
Q ss_pred hhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCC-CCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCC
Q 011080 289 FSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAP-EDDCDITPVVTESSANFIEGLVMDAKQKAATFCQEYKRE 367 (494)
Q Consensus 289 ~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~ 367 (494)
|.|+||.|++++|||||++++|+|+++|.+.++.+ +|+| ++.+++||++++.+.+++..++++++..|+ +.....
T Consensus 235 ~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~~g---~~~~~~ 310 (446)
T d1ad3a_ 235 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHG---GTWDQS 310 (446)
T ss_dssp HTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTSCEEEC---CCEETT
T ss_pred hcCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccchhcccc---eeecCC
Confidence 99999999999999999999999999999999887 7999 789999999999999999887765432221 112456
Q ss_pred CceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhcccceEEECCCC
Q 011080 368 GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 447 (494)
Q Consensus 368 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~~~g~v~iN~~~ 447 (494)
++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++
T Consensus 311 ~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 390 (446)
T d1ad3a_ 311 SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVI 390 (446)
T ss_dssp TTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSS
T ss_pred CCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC-CCCCCCccCccCCCCCCcchHHHHHHhhceeEEEEec
Q 011080 448 SR-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKSTVINL 486 (494)
Q Consensus 448 ~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i~~~~ 486 (494)
.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 391 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 391 VHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp GGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECC
T ss_pred cCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEcc
Confidence 53 4456999999999999999999999999999999864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.7e-79 Score=641.99 Aligned_cols=444 Identities=19% Similarity=0.204 Sum_probs=373.6
Q ss_pred CCeEEeeCCCCCCceE-EEeCCCHHHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChH
Q 011080 28 GKSVTIINPTTRKPHF-RVQACTQEEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAK 106 (494)
Q Consensus 28 ~~~~~v~~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 106 (494)
+..|+++||+|||.|+ +++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcCccccc-cCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHH--hhHHHHhhc
Q 011080 107 DAVTEVVRSGDLVSYCAEEGVRILGEGKLLV-SDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAV--SKIAPALIA 183 (494)
Q Consensus 107 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~aL~a 183 (494)
+++.|+..+++.++|+++..++......... .............+..++|+|||++|+|||||+.+.+ +++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 9999999999999999988877654432221 1111222234567788999999999999999986544 589999999
Q ss_pred CCEEEEcCCCCChHHHHHHH----HHHHHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHc--CC
Q 011080 184 GNSIVLKPPTQGAVAALHMV----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKA--GM 256 (494)
Q Consensus 184 GN~vvlkps~~~~~t~~~l~----~~l~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a--~~ 256 (494)
||+||+|||+.+|.++.++. ++|.++|+|+|++|+|+|++.++++.|++||+|++|+|||| .+|+.+.+.+ ..
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999987765 45668899999999999988899999999999999999999 9999999876 34
Q ss_pred C--ceEEecCCcceEEEeCCCCHHHHH--HHHHHHHhhccCCCccCccEEEEccchH-HHHHHHHHHHHhccccCCCCCC
Q 011080 257 I--PLQMELGGKDACIILEDADLDLAA--ANIVKGGFSYSGQRCTAVKVALVMESVA-DTLVEKVKAKVAKLTVGAPEDD 331 (494)
Q Consensus 257 ~--~~~le~gG~~~~iV~~daDl~~aa--~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~p~~~ 331 (494)
+ ++++|+|||||+||++|||++.|+ ..++.++|.|+||.|++++|+||+++.+ +.|++.+++.++. ++ +.
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~~--~~ 316 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---QS--PS 316 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---CC--CB
T ss_pred ccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---cc--cc
Confidence 4 466799999999999999999875 4789999999999999999999888765 4577777766553 33 46
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCEEeecccCCCceeecEEEe---eCCCCCCCcccccccceeeeEecCCHHHHHH
Q 011080 332 CDITPVVTESSANFIEGLVMDAKQKAATFCQEYKREGNLIWPLLLD---NVRPDMRIAWEEPFGPVLPVIRINSVEEGIH 408 (494)
Q Consensus 332 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 408 (494)
+.+||+++..+.+++ ++.+..+|+++..+.. .+.+..|+++. ++..++++++||+||||++|++|+|+||||+
T Consensus 317 ~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~ 392 (504)
T d1ez0a_ 317 TLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQA-ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLS 392 (504)
T ss_dssp CCSSHHHHHHHHHHH---HHHHTSTTEEEEECCC-CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred cccccchhhhhhhhh---hhhhhhhhhhcccccc-cccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHH
Confidence 789999988776654 6677778887754432 34445555544 3334688999999999999999999999999
Q ss_pred HHhcCCCCceEEEecc--CHHHHHHHHhhcc--cceEEECCCCCC------CCCCCCccCccCCCCCCcchHHHHHHhhc
Q 011080 409 HCNASNFGLQGCVFTR--DINKAILISDAME--TGTVQINSAPSR------GPDHFPFQGLKDSGIGSQGITNSINMMTK 478 (494)
Q Consensus 409 ~~n~~~~gl~a~v~s~--d~~~~~~~~~~~~--~g~v~iN~~~~~------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~ 478 (494)
++|+++|||+++|||+ |..++.+++++++ +|+|+||++++. .+.+.||||.+.||.|+ .|.+++++|++
T Consensus 393 ~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G~~~i~~f~r 471 (504)
T d1ez0a_ 393 LSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIHRWLR 471 (504)
T ss_dssp HHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SSGGGGGGGEE
T ss_pred HHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCc-chHHHHHHHhc
Confidence 9999999999999996 4568899999986 899999997652 23346999999999665 57899999987
Q ss_pred eeE
Q 011080 479 IKS 481 (494)
Q Consensus 479 ~k~ 481 (494)
+.+
T Consensus 472 ~v~ 474 (504)
T d1ez0a_ 472 PVA 474 (504)
T ss_dssp EEE
T ss_pred hhh
Confidence 654
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=9.1e-64 Score=512.16 Aligned_cols=386 Identities=16% Similarity=0.135 Sum_probs=297.1
Q ss_pred HHHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCChHHHHHH------------HHHHHHH
Q 011080 51 EEVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVKEIAKPAKDAVTE------------VVRSGDL 118 (494)
Q Consensus 51 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e------------v~~~~~~ 118 (494)
+|+++++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+||+..+++.| +...++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887655 2333444
Q ss_pred HHHHHHHhHHHhcCccccccCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHH
Q 011080 119 VSYCAEEGVRILGEGKLLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVA 198 (494)
Q Consensus 119 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t 198 (494)
+++++.......+.... ..........++|.||++++.|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~ 152 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDS--------WVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNS 152 (414)
T ss_dssp HHHHHHSCCCTTCEEEE--------EECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHH
T ss_pred HHHHHHhhhhccccccc--------cccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccc
Confidence 44443321111111000 0112334567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHc----CCCCCcEEEecCCchhhHhhhhhCCCccEEEE-ecc-HHHHHHHHHcCCCceEEecCC-cceEEE
Q 011080 199 ALHMVHCFHLA----GFPKGLISCVTGKGSEIGDFLTMHPSINCISF-TGG-DTGISISKKAGMIPLQMELGG-KDACII 271 (494)
Q Consensus 199 ~~~l~~~l~~a----GlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~f-tGs-~~~~~v~~~a~~~~~~le~gG-~~~~iV 271 (494)
+.++++++.++ |+|.++++.+.+.+.+....+..++.+..+.+ +|+ ..++..++. .+++++|+|| |+++||
T Consensus 153 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~--~~~~~le~gGgn~~viv 230 (414)
T d1o20a_ 153 NKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDN--ATVPVLETGVGNCHIFV 230 (414)
T ss_dssp HHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHH--CSSCBCCCCCCCEEEEE
T ss_pred cchhhhHHHhhhhhccccccccccccccchhhhhhcccccccCeEEEcccHHHHHHHhhhc--cccceecccCCCCCeec
Confidence 99999988766 55555577777666666666666555444433 333 333333332 3555666665 556889
Q ss_pred eCCCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHH
Q 011080 272 LEDADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVM 351 (494)
Q Consensus 272 ~~daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 351 (494)
++|||++.|++.++.++|.+ ||.|++++|++||+++||+|+++|.+...+..++++. .+ ....
T Consensus 231 ~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~----~~~~--- 293 (414)
T d1o20a_ 231 DESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CE----KTRE--- 293 (414)
T ss_dssp CTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CH----HHHH---
T ss_pred ccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------ch----hhhh---
Confidence 99999999999999998876 9999999999999999999999999988876554431 11 0000
Q ss_pred HHHHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHH
Q 011080 352 DAKQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIL 431 (494)
Q Consensus 352 ~a~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~ 431 (494)
+.+.+.. .....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 294 -------------------~~~~~~~---~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~ 351 (414)
T d1o20a_ 294 -------------------IVPDVVP---ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKK 351 (414)
T ss_dssp -------------------HSTTSEE---CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHH
T ss_pred -------------------hccccee---cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHH
Confidence 0011111 112346799999999999999999999999999999999999999999999
Q ss_pred HHhhcccceEEECCCCCCCCCCCCccCccCCCCCCc----chHHHHHHhhceeEEEEec
Q 011080 432 ISDAMETGTVQINSAPSRGPDHFPFQGLKDSGIGSQ----GITNSINMMTKIKSTVINL 486 (494)
Q Consensus 432 ~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~----~g~~~l~~~~~~k~i~~~~ 486 (494)
+++++++|+|+||+++.+ .++.|||+.++||+|+. +|++|+++||+.|+|+...
T Consensus 352 ~~~~i~~G~V~IN~~~~~-~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 352 FVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp HHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHhCCeeEEEEeCCCcC-CCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 999999999999987654 34467777777776432 3789999999999998754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8e-53 Score=429.59 Aligned_cols=406 Identities=16% Similarity=0.125 Sum_probs=275.2
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH------HhCCChHHH-HHHHHHHHHHHHHHHH
Q 011080 52 EVNKVVETAKLAQKSWAKTPLWKRAELLHKAAAILKEQKAPIAECLVK------EIAKPAKDA-VTEVVRSGDLVSYCAE 124 (494)
Q Consensus 52 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a-~~ev~~~~~~l~~~~~ 124 (494)
.++++++.|++|++.|+.++.++|.++|+++++.|++++++|+++..+ +.|++.... |-++.. ...++.++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~-~~ri~~~~~ 82 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFK-GDKFEVMLQ 82 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTS-TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCc-hHHHHHHHH
Confidence 467889999999999999999999999999999999999999886443 444442211 100000 011222222
Q ss_pred HhHHHhcCccccc--cCCCCCCCCCceEEEEeeeceeEEeeCCCCchHHHHHhhHHHHhhcCCEEEEcCCCCChHHHHHH
Q 011080 125 EGVRILGEGKLLV--SDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHM 202 (494)
Q Consensus 125 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlkps~~~~~t~~~l 202 (494)
..+.+.....+.. .+.+ ....+...+..+.|+||+++| |+++| ..++++.++||++||+||+||++.++.|+..+
T Consensus 83 ~l~~i~~~~dpvg~~~~~~-~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 83 GIKDVAELEDPVGKVKMAR-ELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHSCCSSSCEEEEE-EEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhccccceeEeeee-eccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 2222221111110 0000 012355677888999999988 66667 66778899999999999999999999999888
Q ss_pred HHHH--------HHcCCCCCcEEEecCCchhhHhhhhhCCCccEEEEecc-HHHHHHHHHcCCCceEEecCCcceEEEeC
Q 011080 203 VHCF--------HLAGFPKGLISCVTGKGSEIGDFLTMHPSINCISFTGG-DTGISISKKAGMIPLQMELGGKDACIILE 273 (494)
Q Consensus 203 ~~~l--------~~aGlP~g~i~~v~g~~~~~~~~L~~~~~v~~v~ftGs-~~~~~v~~~a~~~~~~le~gG~~~~iV~~ 273 (494)
++++ .++|+|+++++++++ ..+++..|..|++||+|+|||| ..++.+.+.+. +|++.++||++|+||++
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~-~pvi~~~~G~~~~~Vd~ 237 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK-IPVLGHADGICSIYLDE 237 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC-SCBTTBCSCCEEEEECT
T ss_pred HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecccc-ceEEEecCCccceeecc
Confidence 7765 477999999999987 5678899999999999999999 87777766654 69999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCccEEEEccchHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHH
Q 011080 274 DADLDLAAANIVKGGFSYSGQRCTAVKVALVMESVADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDA 353 (494)
Q Consensus 274 daDl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a 353 (494)
|||++.|++.++.++|.++|| |++.++++||+++++.|...+......- ..+. .++ .+.......
T Consensus 238 ~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g--------v~l~--~~~----~~~~~~~~~ 302 (436)
T d1vlua_ 238 DADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG--------VTIH--ATK----DLKTAYFDK 302 (436)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHC--------CCBE--ECH----HHHHHHHHH
T ss_pred cccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCC--------cEEE--eCH----HHHHHhhhh
Confidence 999999999999999999996 8899999999999988765554443321 0010 111 122222221
Q ss_pred HHcCCEEeecccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHH
Q 011080 354 KQKAATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 433 (494)
Q Consensus 354 ~~~Ga~v~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~ 433 (494)
...+.. ..+....|++....+. -+.+|.|+|+++|++|+|+||||+++|.+++||+++|||+|.+.+++|+
T Consensus 303 ~~~~~~------~~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~ 373 (436)
T d1vlua_ 303 LNELGK------LTEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM 373 (436)
T ss_dssp HHHHTC------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHH
T ss_pred hhhccc------ccccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHH
Confidence 111111 1122223343332222 2579999999999999999999999999999999999999999999999
Q ss_pred hhcccceEEECCCCCCCCCCCCccCccCCCCC----CcchHHHHHHhhceeEEEEecCC
Q 011080 434 DAMETGTVQINSAPSRGPDHFPFQGLKDSGIG----SQGITNSINMMTKIKSTVINLPT 488 (494)
Q Consensus 434 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~i~~~~~~ 488 (494)
+++++|.|+||.++.+ .++.+||--.+-|+. ..+|+.|++.+|..|+++.-.++
T Consensus 374 ~~vda~~V~vNasTrf-~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g~ 431 (436)
T d1vlua_ 374 KGVDSSGVYWNASTRF-ADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDGQ 431 (436)
T ss_dssp HHCCCSEEEESSCGGG-CC----------------------CCSGGGEEEEEEEECSSC
T ss_pred HhCCceEEEEcCCCcc-CCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCCE
Confidence 9999999999987654 455778744444543 23789999999999998775544
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.14 Score=48.80 Aligned_cols=325 Identities=15% Similarity=0.133 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHHHcHHHHHHHHHHHhCCC----hHHHHHHHHH--------HHHHHHHHHHHhHHHhcCccccccCC
Q 011080 73 WKRAELLHKAAAILKEQKAPIAECLVKEIAKP----AKDAVTEVVR--------SGDLVSYCAEEGVRILGEGKLLVSDS 140 (494)
Q Consensus 73 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~ev~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~ 140 (494)
++..+..+.+.+.++.+.|.-....++...+- +.-...|+.. ..+.++...+..+..+....+. ..
T Consensus 27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~--~~ 104 (431)
T d1k75a_ 27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLP--PV 104 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCC--CE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCC--Cc
Confidence 34455666777777777777666666665422 1111223322 3334455555555555443211 00
Q ss_pred CCCCCCCceEEEEeeeceeEEeeCCCC---chHHHHHhhHHHHhhcCCEE--EEcCCCCChHHHHHHHHHHHHcCCCCCc
Q 011080 141 FPGNERTKYCLTSKIPLGVVLAIPPFN---YPVNLAVSKIAPALIAGNSI--VLKPPTQGAVAALHMVHCFHLAGFPKGL 215 (494)
Q Consensus 141 ~~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~aL~aGN~v--vlkps~~~~~t~~~l~~~l~~aGlP~g~ 215 (494)
.-....+.....++.|+--|++..|.- ||-..+ ...+||-.+|..= +.-|+...|. +.-+.+.+|+.+
T Consensus 105 ~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvL-M~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~-- 177 (431)
T d1k75a_ 105 DVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD-- 177 (431)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHH-HHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE--
T ss_pred eeeccCCceeeeeeeehhhheeeccCCCccchHHHH-HHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc--
Confidence 001123556677788999999999965 655544 4578999999764 4566554443 223456677754
Q ss_pred EEEecCCchhhHhhhh----hCCCccEEEEecc-H--HHHHHHHHc-CCCceEEecCCcc--eEEEeCCCCHHHHHHHHH
Q 011080 216 ISCVTGKGSEIGDFLT----MHPSINCISFTGG-D--TGISISKKA-GMIPLQMELGGKD--ACIILEDADLDLAAANIV 285 (494)
Q Consensus 216 i~~v~g~~~~~~~~L~----~~~~v~~v~ftGs-~--~~~~v~~~a-~~~~~~le~gG~~--~~iV~~daDl~~aa~~i~ 285 (494)
+--+ | |.+.-.+|. .-|.||.|+=.|+ - .+++..... ...-+=+ +-|-+ -+|-++++|.+.++..++
T Consensus 178 iy~~-G-GaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~-~aGPSEv~viAD~~a~p~~iAaDll 254 (431)
T d1k75a_ 178 VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDM-PAGPSEVLVIADSGATPDFVASDLL 254 (431)
T ss_dssp EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESC-CCCCCEEEEEECTTSCHHHHHHHHH
T ss_pred eEec-C-ChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCcccccc-ccCCceEEEEecCCCCHHHHHHHHH
Confidence 2223 2 333333333 2568999987777 2 233332221 1011111 12333 345566789999998888
Q ss_pred HHHhhccCCCccCccEEEEccc--hHHHHHHHHHHHHhccccCCCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCEEeec
Q 011080 286 KGGFSYSGQRCTAVKVALVMES--VADTLVEKVKAKVAKLTVGAPEDDCDITPVVTESSANFIEGLVMDAKQKAATFCQE 363 (494)
Q Consensus 286 ~~~~~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~~ 363 (494)
.-+=+... .+.++|..+ ..+++.+.+.++++.+. .. +.+..+..
T Consensus 255 aQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~--------------r~-------~i~~~s~~-------- 300 (431)
T d1k75a_ 255 SQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP--------------RA-------ETARQALN-------- 300 (431)
T ss_dssp HHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCS--------------SC-------HHHHHHHT--------
T ss_pred hccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhch--------------HH-------HHHHhhhc--------
Confidence 76654443 344666554 34555555655555431 00 11111111
Q ss_pred ccCCCceeecEEEeeCCCCCCCcccccccceeeeEecCCHHHHHHHHhcCCCCceEEEeccCHHHHHHHHhhc-ccceEE
Q 011080 364 YKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQ 442 (494)
Q Consensus 364 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~~-~~g~v~ 442 (494)
-.+ ++.++|++|+++++|..-.= ...|.++|+. .+...+ .+|.|+
T Consensus 301 --------------------------~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIf 346 (431)
T d1k75a_ 301 --------------------------ASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVF 346 (431)
T ss_dssp --------------------------TCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEE
T ss_pred --------------------------cce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhh
Confidence 011 44579999999999995443 4778888874 455555 699999
Q ss_pred ECCCCC-------C-CCCCCCccCccCCCCCCcchHHHHHHhhceeEE
Q 011080 443 INSAPS-------R-GPDHFPFQGLKDSGIGSQGITNSINMMTKIKST 482 (494)
Q Consensus 443 iN~~~~-------~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~i 482 (494)
+..++. . .+..+|-||.. |..+.-+...|+..-++
T Consensus 347 lG~~sp~a~GDY~aGpnHvLPT~G~A-----r~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 347 LGDWSPESAGDYASGTNHVLPTYGYT-----ATCSSLGLADFQKRMTV 389 (431)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCCTTGG-----GTCCCCCGGGGEEEEEE
T ss_pred cCCCCcchhhccccCCCccCCCCCce-----eecCCCCHHHeeeeeeE
Confidence 998765 1 23346777764 33333455667665544
|