Citrus Sinensis ID: 011131

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSGATSLPVSRIHLLISAAFAALLI
cHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHccccEEEEEcccHHHHHHcccHHHHHHHHHHHccccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccccccccccccEEEccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHcccccEcEEEccccccccccHHHHHHHHHHHcccEEEEccccHHHHHHccccccEEEEEccHHHHHHHHHcHHHHHHHHHHHccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccEEEccHcHHHHHccccccccccccccHHHHHHHHHHHHHHccccEEEEcccEEEEccccccccHcEEEEccccccccccccccccEEccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccccccHHccccEcccccEEEEEEcccccccccccccEEEEEcccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHc
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNigtdvsnmpsaSDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEevlgigesasAAAGWINKnvaaympttNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVAsdlnfqvkistphsmdiiprpfppstatfnsaWNSTIYQILQFLKNTksfymlnaypyygytngngifpidyalfrpmpsvkqivdpntlfhyNSMFDAMVDATYYsieglnfsgipvivtesgwpwlgggnetdatLENAETYNNNMIRRVlndtgppsqpdmpinTYVYELFnedkrpgpiseknwgvfftngtsvyplnfsgsgqiignssgvfcvakddadsdklqnglnwacgqghancsaiqpgqpcylpnnikshasYAYNDYYQKMrsvggtcnfdgtamtttkdpsygsctyagsshsstrggflppvasgpvspfsgatslpvsRIHLLISAAFAALLI
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNdtgppsqpdMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSGATSLPVSRIHLLISAAFAALLI
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFsgsgqiignssgVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSGATSLPVSRihllisaafaalli
**LVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRV*************INTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTT***************************************SLPVSRIHLLISAAFAALL*
*****WLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMI***************PINTYVYELFNEDK*****SEKNWGVFFTNGTSVYPL*****************************NGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTY****************************SLPVSRIHLLISAAFAALLI
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCT*********RGGFLPPVASGPVSPFSGATSLPVSRIHLLISAAFAALLI
MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTYAGS**********************GATSLPVSRIHLLISAAFAALLI
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGVFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRSVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSGATSLPVSRIHLLISAAFAALLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q94CD8505 Glucan endo-1,3-beta-gluc yes no 0.955 0.932 0.669 0.0
Q9ZU91501 Glucan endo-1,3-beta-gluc no no 0.874 0.860 0.528 1e-141
O65399511 Glucan endo-1,3-beta-gluc no no 0.872 0.841 0.513 1e-133
Q9C7U5505 Glucan endo-1,3-beta-gluc no no 0.876 0.855 0.510 1e-133
Q8VYE5534 Glucan endo-1,3-beta-gluc no no 0.884 0.816 0.390 8e-96
Q9FJU9506 Glucan endo-1,3-beta-gluc no no 0.939 0.915 0.379 6e-95
Q9M069504 Glucan endo-1,3-beta-gluc no no 0.845 0.827 0.372 1e-79
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.858 0.919 0.345 8e-75
P52409461 Glucan endo-1,3-beta-gluc N/A no 0.833 0.891 0.341 1e-69
Q06915478 Probable glucan endo-1,3- no no 0.851 0.878 0.311 7e-67
>sp|Q94CD8|E134_ARATH Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1 Back     alignment and function desciption
 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/472 (66%), Positives = 389/472 (82%), Gaps = 1/472 (0%)

Query: 1   MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDA 60
           M+L +W    + L + +      A++GVNIGTD++NMP  SDIV +L++ QITHVRLYDA
Sbjct: 1   MLLPRWFAEALLLLLSILACSNAAFIGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDA 60

Query: 61  DSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQV 120
           +SHMLKA + + IEV+VGV NEE+L IG   SAAA W+NKNVAAY+P+TNITAIAVGS+V
Sbjct: 61  NSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEV 120

Query: 121 LTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNST 180
           LT+IP+ A +L SA+NN+HKALVAS+LNF+VK+S+P SMDI+P+PFPPST+TF+ +WN+T
Sbjct: 121 LTTIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTT 180

Query: 181 IYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSM 240
           +YQ+LQFLKNT SF+MLNAYPYYGYT  NGIFP+DYALF+ +  VKQIVDPNTL HYNSM
Sbjct: 181 VYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNTLLHYNSM 240

Query: 241 FDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDT 300
           FDAMVDA YYS+E LNFS IPV+VTE+GWP  GG +E  AT+ NAET+N N+I+RVLN++
Sbjct: 241 FDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNS 300

Query: 301 GPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYP-LNFSGSGQIIGNSSG 359
           GPPSQPD+PINTY+YEL+NEDKR GP+SE+NWG+ F NGTSVYP     GS     N S 
Sbjct: 301 GPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSS 360

Query: 360 VFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMR 419
           +FCVAK DAD DKL +GLNWACGQG ANC+AIQPGQPCYLPN++KSHAS+A+NDYYQKM+
Sbjct: 361 MFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMK 420

Query: 420 SVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSG 471
           S GGTC+FDGTA+TTT+DPSY +C Y GS +++   G  PP A GP SP  G
Sbjct: 421 SAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPDALGPASPLGG 472

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function description
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|P52409|E13B_WHEAT Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1 Back     alignment and function description
>sp|Q06915|EA6_ARATH Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
356525258496 PREDICTED: glucan endo-1,3-beta-glucosid 1.0 0.993 0.741 0.0
356512493496 PREDICTED: glucan endo-1,3-beta-glucosid 0.985 0.979 0.746 0.0
357518853498 Glucan endo-1,3-beta-glucosidase [Medica 0.995 0.985 0.729 0.0
388498354498 unknown [Medicago truncatula] 0.995 0.985 0.725 0.0
225435729 676 PREDICTED: glucan endo-1,3-beta-glucosid 0.997 0.727 0.727 0.0
147797703473 hypothetical protein VITISV_020314 [Viti 0.908 0.947 0.761 0.0
356561929491 PREDICTED: glucan endo-1,3-beta-glucosid 0.949 0.953 0.723 0.0
357462665498 Glucan endo-1,3-beta-glucosidase [Medica 0.985 0.975 0.709 0.0
356554364530 PREDICTED: glucan endo-1,3-beta-glucosid 0.975 0.907 0.710 0.0
224052952461 predicted protein [Populus trichocarpa] 0.924 0.989 0.744 0.0
>gi|356525258|ref|XP_003531243.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] Back     alignment and taxonomy information
 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/495 (74%), Positives = 425/495 (85%), Gaps = 2/495 (0%)

Query: 1   MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDA 60
           M L  WL SV+ L + + T  LGA+VGVNIGTDVS++PSAS+IV IL+ANQITHVRLYDA
Sbjct: 1   MKLKTWLASVLLLTVAMLTATLGAFVGVNIGTDVSDLPSASNIVDILQANQITHVRLYDA 60

Query: 61  DSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQV 120
           ++H+L+ALS + IEVIVGV NEEVL IGES SAAA WINKNV AY+P+TNIT IAVGS+V
Sbjct: 61  NAHLLQALSNTSIEVIVGVTNEEVLRIGESPSAAATWINKNVVAYVPSTNITGIAVGSEV 120

Query: 121 LTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNST 180
           L++IPN A VLV AMN+LHKALVA++LNF+VK+STP SMDIIP+PFPPSTATFNS+WNST
Sbjct: 121 LSTIPNVAPVLVPAMNSLHKALVAANLNFRVKVSTPQSMDIIPKPFPPSTATFNSSWNST 180

Query: 181 IYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSM 240
           IYQ+LQFLKNT S YMLNAYPYYGYT G+GIFPI+YALFRP+PSVKQIVDPNTLFHYNSM
Sbjct: 181 IYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLPSVKQIVDPNTLFHYNSM 240

Query: 241 FDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDT 300
           FDAMVDATYYSIE LNF+ IP++VTE+GWP  GG NE DAT ENAE Y NNMI+RV+ND+
Sbjct: 241 FDAMVDATYYSIEALNFNNIPIVVTETGWPSFGGANEPDATEENAELYINNMIQRVMNDS 300

Query: 301 GPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFSGSGQIIGNSSGV 360
           GPPSQP++ INTY+YELFNEDKR GP+SEKNWG+F+TNG++VYPL+F  S QI GNSSGV
Sbjct: 301 GPPSQPNIAINTYIYELFNEDKRNGPVSEKNWGIFYTNGSTVYPLSFGASDQITGNSSGV 360

Query: 361 FCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMRS 420
           FCVAKD AD+DKLQ+GL+WACGQG ANC+AIQPGQPCYLPNN+KSHASYAYNDYYQ+  S
Sbjct: 361 FCVAKDGADTDKLQSGLSWACGQGGANCAAIQPGQPCYLPNNVKSHASYAYNDYYQRKHS 420

Query: 421 VGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSGATSLPVSRI 480
            GGTC+FDGTA  TTKDPS  SC +AGSS+SST G  LPP A GP  PF  + +L VS +
Sbjct: 421 SGGTCDFDGTATITTKDPSSSSCIFAGSSNSSTGGLSLPPTALGPSGPFGASMNLQVSSL 480

Query: 481 HLLISA--AFAALLI 493
             LISA   F AL +
Sbjct: 481 KYLISAVGVFLALAV 495

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356512493|ref|XP_003524953.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|357518853|ref|XP_003629715.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|355523737|gb|AET04191.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388498354|gb|AFK37243.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|225435729|ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147797703|emb|CAN72077.1| hypothetical protein VITISV_020314 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356561929|ref|XP_003549229.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|357462665|ref|XP_003601614.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|355490662|gb|AES71865.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356554364|ref|XP_003545517.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|224052952|ref|XP_002297638.1| predicted protein [Populus trichocarpa] gi|222844896|gb|EEE82443.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2092855505 AT3G13560 [Arabidopsis thalian 0.955 0.932 0.663 1.1e-181
TAIR|locus:2065403501 AT2G01630 [Arabidopsis thalian 0.943 0.928 0.496 1.1e-128
TAIR|locus:2205298505 AT1G66250 [Arabidopsis thalian 0.876 0.855 0.503 2.4e-122
TAIR|locus:2118339534 AT4G29360 [Arabidopsis thalian 0.685 0.632 0.404 1.3e-96
TAIR|locus:2056519472 AT2G05790 [Arabidopsis thalian 0.685 0.716 0.398 3.8e-91
TAIR|locus:2164991506 AT5G56590 [Arabidopsis thalian 0.924 0.901 0.382 9.6e-89
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.870 0.942 0.375 5e-83
TAIR|locus:2139519504 AT4G34480 [Arabidopsis thalian 0.945 0.924 0.356 1.8e-80
TAIR|locus:2161710465 AT5G55180 [Arabidopsis thalian 0.860 0.911 0.369 6.8e-79
TAIR|locus:2042604503 AT2G16230 [Arabidopsis thalian 0.947 0.928 0.343 1.4e-78
TAIR|locus:2092855 AT3G13560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1763 (625.7 bits), Expect = 1.1e-181, P = 1.1e-181
 Identities = 313/472 (66%), Positives = 387/472 (81%)

Query:     1 MMLVKWLGSVVFLAIGLFTNVLGAYVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDA 60
             M+L +W    + L + +      A++GVNIGTD++NMP  SDIV +L++ QITHVRLYDA
Sbjct:     1 MLLPRWFAEALLLLLSILACSNAAFIGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDA 60

Query:    61 DSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAYMPTTNITAIAVGSQV 120
             +SHMLKA + + IEV+VGV NEE+L IG   SAAA W+NKNVAAY+P+TNITAIAVGS+V
Sbjct:    61 NSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEV 120

Query:   121 LTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNST 180
             LT+IP+ A +L SA+NN+HKALVAS+LNF+VK+S+P SMDI+P+PFPPST+TF+ +WN+T
Sbjct:   121 LTTIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTT 180

Query:   181 IYQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSM 240
             +YQ+LQFLKNT SF+MLNAYPYYGYT  NGIFP+DYALF+ +  VKQIVDPNTL HYNSM
Sbjct:   181 VYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNTLLHYNSM 240

Query:   241 FDAMVDATYYSIEGLNFSGIPVIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDT 300
             FDAMVDA YYS+E LNFS IPV+VTE+GWP  GG +E  AT+ NAET+N N+I+RVLN++
Sbjct:   241 FDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNS 300

Query:   301 GPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPLNFXXXXXXXXXX-XX 359
             GPPSQPD+PINTY+YEL+NEDKR GP+SE+NWG+ F NGTSVYPL+              
Sbjct:   301 GPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSS 360

Query:   360 VFCVAKDDADSDKLQNGLNWACGQGHANCSAIQPGQPCYLPNNIKSHASYAYNDYYQKMR 419
             +FCVAK DAD DKL +GLNWACGQG ANC+AIQPGQPCYLPN++KSHAS+A+NDYYQKM+
Sbjct:   361 MFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMK 420

Query:   420 SVGGTCNFDGTAMTTTKDPSYGSCTYAGSSHSSTRGGFLPPVASGPVSPFSG 471
             S GGTC+FDGTA+TTT+DPSY +C Y GS +++   G  PP A GP SP  G
Sbjct:   421 SAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPDALGPASPLGG 472
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2065403 AT2G01630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205298 AT1G66250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042604 AT2G16230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94CD8E134_ARATH3, ., 2, ., 1, ., 3, 90.66940.95530.9326yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 9e-85
smart0076885 smart00768, X8, Possibly involved in carbohydrate 3e-42
pfam0798377 pfam07983, X8, X8 domain 2e-23
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 7e-05
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  263 bits (674), Expect = 9e-85
 Identities = 127/322 (39%), Positives = 185/322 (57%), Gaps = 12/322 (3%)

Query: 26  VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVL 85
           +GV  G   +N+PS SD+V++ ++N I  +R+YD D+  LKAL  SGI VI+GV N+++ 
Sbjct: 1   IGVCYGVKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLA 60

Query: 86  GIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVAS 145
            +  S S AA W+  NV  Y P   I  IAVG++V        S LV AM N+  AL A+
Sbjct: 61  ELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPG--TTQSFLVPAMRNIRNALTAA 118

Query: 146 DLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGY 205
            L  ++K+ST    DI+   FPPS  +F     S +  I+ FL  T +  + N YPY+ Y
Sbjct: 119 GLGNKIKVSTSVRFDILGNSFPPSYGSFRVETRSFMDPIIVFLAGTNAPLLANVYPYFAY 178

Query: 206 TNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT 265
           +N      ++YALF+  P    +        Y ++FDAMVDA Y ++E      + V+V+
Sbjct: 179 SNNPRDISLNYALFQ--PGTTVVDGGLG---YQNLFDAMVDAVYAALEKAGGPSVEVVVS 233

Query: 266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPG 325
           ESGWP  GG     AT+ENA TYN N+I  V    G P +P   I TYV+ +F+E+++PG
Sbjct: 234 ESGWPSDGGFA---ATIENARTYNQNLINHVKK--GTPKRPGWAIETYVFAMFDENQKPG 288

Query: 326 PISEKNWGVFFTNGTSVYPLNF 347
              EK++G+F+ N    YP++F
Sbjct: 289 ESVEKHFGLFYPNKQPKYPIDF 310

Length = 310
>gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding Back     alignment and domain information
>gnl|CDD|219681 pfam07983, X8, X8 domain Back     alignment and domain information
>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
smart0076885 X8 Possibly involved in carbohydrate binding. The 99.95
PF0798378 X8: X8 domain; InterPro: IPR012946 The X8 domain [ 99.87
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 99.77
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 99.09
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 98.54
PRK10150604 beta-D-glucuronidase; Provisional 98.33
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 98.19
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.49
TIGR03356427 BGL beta-galactosidase. 97.12
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 97.05
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 96.99
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 96.13
PLN02998497 beta-glucosidase 95.21
PLN02814504 beta-glucosidase 95.2
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 94.87
PLN02849503 beta-glucosidase 94.42
PRK13511469 6-phospho-beta-galactosidase; Provisional 93.98
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 92.07
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 89.45
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 88.99
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 87.31
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 86.59
PRK09936296 hypothetical protein; Provisional 84.16
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 83.95
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 82.69
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 80.51
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=7.1e-84  Score=655.97  Aligned_cols=310  Identities=47%  Similarity=0.859  Sum_probs=255.4

Q ss_pred             eeEEecCCCCCCCCHHHHHHHHHhCCCCEEEEccCChHHHHHHhhCCCeEEEEecCcchhhhcccHHHHHHHHHHhhccc
Q 011131           26 VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAY  105 (493)
Q Consensus        26 ~GVnYg~~~~nlps~~~vv~llk~~~i~~VRiY~~d~~vL~A~a~~gi~V~lGv~n~~~~~la~~~~~a~~wv~~~v~~~  105 (493)
                      ||||||+.++|+|++.++++++|+++|++||||++|+++|+|++++||+|++||+|+++.++++++..|..|+++||.+|
T Consensus         1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~   80 (310)
T PF00332_consen    1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY   80 (310)
T ss_dssp             EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred             CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEeccccccCCCCCHHHHHHHHHHHHHHHHhCCCCCceEEeccccCccccCCCCCCccccccchhHHHHHHH
Q 011131          106 MPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQIL  185 (493)
Q Consensus       106 ~~~~~I~~I~VGNEvl~~~~~~~~~Lv~am~~v~~aL~~~gl~~~IkVsTa~~~~vl~~s~pPs~g~F~~~~~~~l~~ll  185 (493)
                      +|.++|++|+||||++......  .|+|+|+++|++|++.||+++|||+|++.++++..+||||.|.|+.++.++|++++
T Consensus        81 ~~~~~i~~i~VGnEv~~~~~~~--~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l  158 (310)
T PF00332_consen   81 LPAVNIRYIAVGNEVLTGTDNA--YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLL  158 (310)
T ss_dssp             TTTSEEEEEEEEES-TCCSGGG--GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHH
T ss_pred             CcccceeeeecccccccCccce--eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccchhhhhHHH
Confidence            9999999999999999765433  89999999999999999998899999999999999999999999999999999999


Q ss_pred             HHHHhcCCcccccccCCccccCCCCccccccccccCCCCCCceecCCCCcccccHHHHHHHHHHHHHHhcCCCCCcEEEe
Q 011131          186 QFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT  265 (493)
Q Consensus       186 ~fL~~~~d~~~vNiyPyf~~~~~~~~i~l~~Alf~~~~~~~g~~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~ivVs  265 (493)
                      +||.++++|||+|+||||.+..+|..++||||+|++   +.++.|.  +++|+||||+|+|++++||+|+|+++++|+|+
T Consensus       159 ~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~---~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~  233 (310)
T PF00332_consen  159 KFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQP---NSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVG  233 (310)
T ss_dssp             HHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-S---SS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--EEEE
T ss_pred             HHhhccCCCceeccchhhhccCCcccCCcccccccc---ccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCceeEEe
Confidence            999999999999999999999999999999999998   6666654  78999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcCCCCCCCCCCcceEEEEEecCCCCCCCCCCCceeeeecCCCceeeec
Q 011131          266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPL  345 (493)
Q Consensus       266 ETGWPS~G~~~~~~As~~na~~y~~~lv~~~~s~~GTP~rpg~~~~~y~F~~FDE~wK~G~~~E~~wGlf~~d~~~ky~l  345 (493)
                      ||||||+|+   .+|+.+||+.|++++++++.  .|||+||+..+++||||+|||+||+|+.+|||||||++||++||+|
T Consensus       234 ETGWPs~G~---~~a~~~nA~~~~~nl~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~  308 (310)
T PF00332_consen  234 ETGWPSAGD---PGATPENAQAYNQNLIKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDL  308 (310)
T ss_dssp             EE---SSSS---TTCSHHHHHHHHHHHHHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS--
T ss_pred             ccccccCCC---CCCCcchhHHHHHHHHHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCC
Confidence            999999999   35899999999999999997  6999999999999999999999999988999999999999999999


Q ss_pred             cc
Q 011131          346 NF  347 (493)
Q Consensus       346 ~~  347 (493)
                      +|
T Consensus       309 ~f  310 (310)
T PF00332_consen  309 DF  310 (310)
T ss_dssp             --
T ss_pred             CC
Confidence            86

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00768 X8 Possibly involved in carbohydrate binding Back     alignment and domain information
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PRK09936 hypothetical protein; Provisional Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 2e-53
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 4e-46
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 2e-45
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 1e-44
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 3e-44
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 2e-42
2jon_A101 Solution Structure Of The C-Terminal Domain Ole E 9 1e-13
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure 
Iteration: 1

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/322 (36%), Positives = 194/322 (60%), Gaps = 10/322 (3%)
Query: 26  VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVL 85
           +GV  G   +N+P  S++V++ ++N I  +RLYD +   L+AL  S I+V++ V   +V 
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 86  GIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVAS 145
            +  + SAA  WI +NV AY P+ +   IAVG++++    + A  ++ AM N++ AL ++
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPG-SDLAQYILPAMRNIYNALSSA 119
Query: 146 DLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGY 205
            L  Q+K+ST     ++   +PPS   F+SA  + +  I+QFL +  +  ++N YPY+ Y
Sbjct: 120 GLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSY 179
Query: 206 TNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT 265
           T   G   + YALF    +   +V  +  F Y ++FDA+VDA + ++E +  + + V+V+
Sbjct: 180 TGNPGQISLPYALF----TASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS 235
Query: 266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPG 325
           ESGWP  GGG E  A+  NA+TYN N+IR V    G P +P   I  Y++E+FNE+++ G
Sbjct: 236 ESGWPSAGGGAE--ASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAG 291
Query: 326 PISEKNWGVFFTNGTSVYPLNF 347
            I E+N+G+F+ N   VY ++F
Sbjct: 292 GI-EQNFGLFYPNKQPVYQISF 312
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 3e-98
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 7e-96
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 4e-92
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 2e-90
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 5e-90
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 5e-40
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 4e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score =  297 bits (762), Expect = 3e-98
 Identities = 115/322 (35%), Positives = 191/322 (59%), Gaps = 10/322 (3%)

Query: 26  VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVL 85
           +GV  G   +N+P  S++V++ ++N I  +RLYD +   L+AL  S I+V++ V   +V 
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60

Query: 86  GIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVAS 145
            +  + SAA  WI +NV AY P+ +   IAVG++++    + A  ++ AM N++ AL ++
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPG-SDLAQYILPAMRNIYNALSSA 119

Query: 146 DLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGY 205
            L  Q+K+ST     ++   +PPS   F+SA  + +  I+QFL +  +  ++N YPY+ Y
Sbjct: 120 GLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSY 179

Query: 206 TNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT 265
           T   G   + YALF        +V  +  F Y ++FDA+VDA + ++E +  + + V+V+
Sbjct: 180 TGNPGQISLPYALFTASG----VVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS 235

Query: 266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPG 325
           ESGWP  GGG E  A+  NA+TYN N+IR      G P +P   I  Y++E+FNE+++ G
Sbjct: 236 ESGWPSAGGGAE--ASTSNAQTYNQNLIRH--VGGGTPRRPGKEIEAYIFEMFNENQKAG 291

Query: 326 PISEKNWGVFFTNGTSVYPLNF 347
              E+N+G+F+ N   VY ++F
Sbjct: 292 G-IEQNFGLFYPNKQPVYQISF 312
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 99.97
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.61
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.6
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 99.4
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 99.17
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 98.82
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.82
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 98.74
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.69
3cmg_A667 Putative beta-galactosidase; structural genomics, 98.6
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.57
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.5
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 98.48
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.47
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 98.46
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.45
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 98.43
3fn9_A692 Putative beta-galactosidase; structural genomics, 98.42
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.38
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 98.37
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 98.36
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 98.35
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 98.35
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 98.34
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.33
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 98.33
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 98.31
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 98.3
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 98.29
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 98.18
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 98.17
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 98.15
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 98.14
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 98.13
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 98.12
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 98.11
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.99
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.94
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 97.85
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 97.84
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.84
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 97.82
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.79
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 97.76
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.76
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 97.65
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 97.63
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 97.63
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 97.51
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.48
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 97.44
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 97.31
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 97.31
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 97.28
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 97.28
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 97.26
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 97.22
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 97.17
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 97.16
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 97.11
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 97.09
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 97.09
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 97.09
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 97.02
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 96.99
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 96.98
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 96.95
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 96.87
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 96.79
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 96.71
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 96.71
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 96.71
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 96.69
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 96.62
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 96.46
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 96.44
3d3a_A612 Beta-galactosidase; protein structure initiative I 96.35
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 96.31
2y2w_A574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 96.27
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 96.27
3vny_A488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 96.26
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 96.23
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 96.08
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 96.07
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 96.01
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 95.94
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 95.84
3thd_A 654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 95.53
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 95.5
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 95.4
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 95.33
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 95.16
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 95.06
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 94.71
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 94.62
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 94.18
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 93.96
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 93.83
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 93.69
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 93.66
3gm8_A801 Glycoside hydrolase family 2, candidate beta-GLYC; 92.55
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 92.42
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 92.21
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 91.54
4aw7_A591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 91.13
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 89.72
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 87.97
2v3g_A283 Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich 86.5
3ug3_A504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 85.92
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 83.09
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-94  Score=732.64  Aligned_cols=313  Identities=35%  Similarity=0.632  Sum_probs=300.7

Q ss_pred             ceeEEecCCCCCCCCHHHHHHHHHhCCCCEEEEccCChHHHHHHhhCCCeEEEEecCcchhhhcccHHHHHHHHHHhhcc
Q 011131           25 YVGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAA  104 (493)
Q Consensus        25 ~~GVnYg~~~~nlps~~~vv~llk~~~i~~VRiY~~d~~vL~A~a~~gi~V~lGv~n~~~~~la~~~~~a~~wv~~~v~~  104 (493)
                      .+|||||+.++|||+|++|+++||+++|++||||++|+++|+||+++||+|+|||||+++.+++ ++.+|.+||++||.+
T Consensus         1 ~iGvnyG~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~   79 (316)
T 3em5_A            1 EVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRG   79 (316)
T ss_dssp             CCEEECCCCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGG
T ss_pred             CeeEEcCcCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhh
Confidence            3799999999999999999999999999999999999999999999999999999999999998 899999999999999


Q ss_pred             cCCCceEEEEEeccccccCCCCC---HHHHHHHHHHHHHHHHhCCCCCceEEeccccCccccCCCCCCccccccchhHHH
Q 011131          105 YMPTTNITAIAVGSQVLTSIPNA---ASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTI  181 (493)
Q Consensus       105 ~~~~~~I~~I~VGNEvl~~~~~~---~~~Lv~am~~v~~aL~~~gl~~~IkVsTa~~~~vl~~s~pPs~g~F~~~~~~~l  181 (493)
                      |+|+++|++|+||||++.+++.+   +++|+|+|+|||++|+++||+++|||||++++++|.++||||+|.||+|+.++|
T Consensus        80 y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~  159 (316)
T 3em5_A           80 FWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYL  159 (316)
T ss_dssp             GTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHH
T ss_pred             cCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHHHHH
Confidence            99999999999999999987765   899999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCcccccccCCccccCCCCccccccccccCCCCCCceecCCCCcccccHHHHHHHHHHHHHHhcCCCCCc
Q 011131          182 YQILQFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIP  261 (493)
Q Consensus       182 ~~ll~fL~~~~d~~~vNiyPyf~~~~~~~~i~l~~Alf~~~~~~~g~~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~  261 (493)
                      +|||+||.+++||||||+||||++..+|.+|+|+||||++    .+++|++++++|+||||+|+|++++||+|+|+++++
T Consensus       160 ~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~----~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~  235 (316)
T 3em5_A          160 NPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTS----PSVVVWDGQRGYKNLFDATLDALYSALERASGGSLE  235 (316)
T ss_dssp             HHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCC----SSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCC
T ss_pred             HHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccC----CCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence            9999999999999999999999999999999999999997    577888899999999999999999999999999999


Q ss_pred             EEEeeccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcCCCCCCCCCCcceEEEEEecCCCCCCCCCCCceeeeecCCCce
Q 011131          262 VIVTESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTS  341 (493)
Q Consensus       262 ivVsETGWPS~G~~~~~~As~~na~~y~~~lv~~~~s~~GTP~rpg~~~~~y~F~~FDE~wK~G~~~E~~wGlf~~d~~~  341 (493)
                      |+|+||||||+|+.   +||++||++|++++++|+  +.|||+|||..+++|||++|||+||+ ++.|+|||||++|++|
T Consensus       236 v~V~EtGWPs~G~~---~as~~na~~y~~~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~-~~~E~~~Glf~~d~~~  309 (316)
T 3em5_A          236 VVVSESGWPSAGAF---AATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHFGLFFPNKWQ  309 (316)
T ss_dssp             EEEEEECCCSSSST---TCCHHHHHHHHHHHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCS-SGGGGCCCSBCTTSCB
T ss_pred             eEeccccCCCCCCC---CCCHHHHHHHHHHHHHhc--cCCCCCCCCCCceEEEEEeecCCCCC-CCCCceeeEECCCCCE
Confidence            99999999999974   699999999999999999  46999999988999999999999998 4689999999999999


Q ss_pred             eeecccc
Q 011131          342 VYPLNFS  348 (493)
Q Consensus       342 ky~l~~~  348 (493)
                      ||+|+|+
T Consensus       310 ky~l~~~  316 (316)
T 3em5_A          310 KYNLNFS  316 (316)
T ss_dssp             SSCCCCC
T ss_pred             eecCCCC
Confidence            9999874
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* Back     alignment and structure
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 493
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-100
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 7e-95
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 5e-94
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  301 bits (771), Expect = e-100
 Identities = 116/322 (36%), Positives = 192/322 (59%), Gaps = 10/322 (3%)

Query: 26  VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVL 85
           +GV  G   +N+P  S++V++ ++N I  +RLYD +   L+AL  S I+V++ V   +V 
Sbjct: 1   IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60

Query: 86  GIGESASAAAGWINKNVAAYMPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVAS 145
            +  + SAA  WI +NV AY P+ +   IAVG++++    + A  ++ AM N++ AL ++
Sbjct: 61  SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPG-SDLAQYILPAMRNIYNALSSA 119

Query: 146 DLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQILQFLKNTKSFYMLNAYPYYGY 205
            L  Q+K+ST     ++   +PPS   F+SA  + +  I+QFL +  +  ++N YPY+ Y
Sbjct: 120 GLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSY 179

Query: 206 TNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT 265
           T   G   + YALF        +V  +  F Y ++FDA+VDA + ++E +  + + V+V+
Sbjct: 180 TGNPGQISLPYALFTAS----GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS 235

Query: 266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPG 325
           ESGWP  GGG E  A+  NA+TYN N+IR V    G P +P   I  Y++E+FNE+++ G
Sbjct: 236 ESGWPSAGGGAE--ASTSNAQTYNQNLIRHV--GGGTPRRPGKEIEAYIFEMFNENQKAG 291

Query: 326 PISEKNWGVFFTNGTSVYPLNF 347
              E+N+G+F+ N   VY ++F
Sbjct: 292 G-IEQNFGLFYPNKQPVYQISF 312
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 99.18
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 99.11
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 98.96
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.93
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.7
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 98.68
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.63
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.62
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 98.53
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 98.51
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 98.41
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 98.34
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 98.33
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 98.22
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.21
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 98.16
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 98.13
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 98.13
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 98.06
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.82
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.7
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 97.58
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 97.5
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.46
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 97.44
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 97.41
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 97.05
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 97.02
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 96.8
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 96.78
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 96.78
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.63
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 96.62
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 96.52
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 96.49
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 96.37
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 96.14
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 95.59
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 95.58
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 95.46
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 95.3
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 94.61
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 94.5
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 94.25
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 93.79
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 92.48
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 91.75
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 91.38
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 89.34
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=1.3e-83  Score=652.50  Aligned_cols=312  Identities=37%  Similarity=0.700  Sum_probs=297.2

Q ss_pred             eeEEecCCCCCCCCHHHHHHHHHhCCCCEEEEccCChHHHHHHhhCCCeEEEEecCcchhhhcccHHHHHHHHHHhhccc
Q 011131           26 VGVNIGTDVSNMPSASDIVAILRANQITHVRLYDADSHMLKALSKSGIEVIVGVLNEEVLGIGESASAAAGWINKNVAAY  105 (493)
Q Consensus        26 ~GVnYg~~~~nlps~~~vv~llk~~~i~~VRiY~~d~~vL~A~a~~gi~V~lGv~n~~~~~la~~~~~a~~wv~~~v~~~  105 (493)
                      +|||||++++|+||++||+++||++||++||||++||+||+|++++||+|||||||+++.+++++++.|.+|++++|.+|
T Consensus         1 ~gi~yg~~~~nlps~~~vv~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~~   80 (312)
T d2cyga1           1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAY   80 (312)
T ss_dssp             CEEECCCCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGG
T ss_pred             CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhcc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEeccccccCCCCCHHHHHHHHHHHHHHHHhCCCCCceEEeccccCccccCCCCCCccccccchhHHHHHHH
Q 011131          106 MPTTNITAIAVGSQVLTSIPNAASVLVSAMNNLHKALVASDLNFQVKISTPHSMDIIPRPFPPSTATFNSAWNSTIYQIL  185 (493)
Q Consensus       106 ~~~~~I~~I~VGNEvl~~~~~~~~~Lv~am~~v~~aL~~~gl~~~IkVsTa~~~~vl~~s~pPs~g~F~~~~~~~l~~ll  185 (493)
                      ++.++|++|+||||++.+++. ...++|+|+++|++|+++|+.+.|++++++++++|..++|||++.|++++.++|++++
T Consensus        81 ~~~~~I~~IaVGNE~l~~~~~-~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~~~l~~~~  159 (312)
T d2cyga1          81 WPSVSFRYIAVGNELIPGSDL-AQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIV  159 (312)
T ss_dssp             TTTSEEEEEEEEESCTTTSTT-GGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHHHHHHHHH
T ss_pred             CCCceEEEEEecCEEeeCCcC-chhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhHHHHHHHH
Confidence            999999999999999988754 4678899999999999999998899999999999999999999999999999999999


Q ss_pred             HHHHhcCCcccccccCCccccCCCCccccccccccCCCCCCceecCCCCcccccHHHHHHHHHHHHHHhcCCCCCcEEEe
Q 011131          186 QFLKNTKSFYMLNAYPYYGYTNGNGIFPIDYALFRPMPSVKQIVDPNTLFHYNSMFDAMVDATYYSIEGLNFSGIPVIVT  265 (493)
Q Consensus       186 ~fL~~~~d~~~vNiyPyf~~~~~~~~i~l~~Alf~~~~~~~g~~d~~~~~~y~n~fda~~Dav~~a~~k~g~~~~~ivVs  265 (493)
                      +||+.++||||+|+||||++..++..++++||+|++    .+..+.+++..|+|+||+|+|++++||+|+|+++++|+|+
T Consensus       160 ~fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~----~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~~~ivI~  235 (312)
T d2cyga1         160 QFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTA----SGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVS  235 (312)
T ss_dssp             HHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCC----CSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEE
T ss_pred             HHHHhcCCeeeEeccchhhhccCcccccchhhhccC----CCccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEe
Confidence            999999999999999999999999999999999997    3555666789999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCChHHHHHHHHHHHHhhhcCCCCCCCCCCcceEEEEEecCCCCCCCCCCCceeeeecCCCceeeec
Q 011131          266 ESGWPWLGGGNETDATLENAETYNNNMIRRVLNDTGPPSQPDMPINTYVYELFNEDKRPGPISEKNWGVFFTNGTSVYPL  345 (493)
Q Consensus       266 ETGWPS~G~~~~~~As~~na~~y~~~lv~~~~s~~GTP~rpg~~~~~y~F~~FDE~wK~G~~~E~~wGlf~~d~~~ky~l  345 (493)
                      ||||||+|+..  .|+++||++|++++++|+.  .|||+||+.++++|+||+|||+||+| ++|+|||||++||++||+|
T Consensus       236 EtGWPs~G~~~--~as~~na~~y~~~l~~~~~--~gtp~~~~~~i~~f~FeaFDE~wK~G-~~E~~wGlf~~d~~~ky~l  310 (312)
T d2cyga1         236 ESGWPSAGGGA--EASTSNAQTYNQNLIRHVG--GGTPRRPGKEIEAYIFEMFNENQKAG-GIEQNFGLFYPNKQPVYQI  310 (312)
T ss_dssp             EECCCSSSSST--TSSHHHHHHHHHHHHHHGG--GCCSSSCSSCCCEEESCSBCCTTSCS-SGGGCCCSBCTTSCBSSCC
T ss_pred             cCCcccCCCCC--CCCHHHHHHHHHHHHHHHh--cCCCCCCCCCccEEEEeEeCCCCCCC-CccCccccCCCCCCEecCC
Confidence            99999999753  5999999999999999994  59999999999999999999999998 5899999999999999999


Q ss_pred             cc
Q 011131          346 NF  347 (493)
Q Consensus       346 ~~  347 (493)
                      +|
T Consensus       311 ~f  312 (312)
T d2cyga1         311 SF  312 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            87
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure