Citrus Sinensis ID: 011143

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
ccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHccccHHHHHHccccccccccccccccccccEEEcccccccEEEEEEEEccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEccEEEEEEEEEEEEEEccEEEccEEEEEEEEccccccccccccEEEccccccccccccccHHHHHHHcccccccEEEEEEEcccccccccEEEEccccccccccccEEEEccccEEEEEEEcEEEEccEEEEEccccEEEEEccccccccccHHHHHHHHHHHcccccccccEEEEEcccccEEEEEEEcccccccEEEEccEEcccccccccccccEEEcccccccccccccccccccccHHHHEHHccccccccHHHHHHHHHHHHcccccccccEEEEcccccccccEEEEEccEEEEcccccEEEEEcccccEEEEEccccccEEEEEEEEEEEccc
cccHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccEEEEEEEEcccEEEEEEEEccccEEEEEEEEcccccEEEEEccccccHHHHccccEcHHHccccEEEEEEEEEEccccEEEEEEEEEEEEEccEEEEEEEEEEEEEEcHHHHccccccEEEEccccccccHHcccHHHHHHHcccccccEEEEEEccHHHcccccEEEcccccHHHEEEEEEEEEEEEEccEEEEEccEEEccEEcccccccEEEEEccccccEEEcHHHHHHHHHHcccccccccEEEEEEcccccccEEEEEEcccccEEcccEEEEEEccccccccccHHHEEccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccEEcHHHHHHcccEEEEEccEEEEEcHHHEEEEEccccHEEEEEEEEEEHcHEEEEEEEEHEEc
MGTKFTAIRVALFLFLILSpaafalpndglvrIGLRKKKLDQINRLVgqtvskeeetmrtpvrrynlhgslgdsdtDIVALNNFmdaqyfgevsigtpsqtFTVIFDtgssnlwvpsakcyfsvscyfhskyksshsstykrngtsaaiqygtgaisgffsqdnvkvgdlVVKNQDFIEATKEASITFLAAKFDgilglgfqeisigkAIPVWYNMldqglvkepvfsfwlnrdiegeeggeivfggvdpdhykgehtyvpvtkkgywqfemgdvlidgettgycstgcnaiadsgtsllagptTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQpqkicsqmglctfdgtrgfsmgiesvidkssdkssdgvhdsAMCSACEMAVIWMQNKLRRNETADQILNYVNQLcdrlpspngesavdcdnlssmpnvsftiggkvfdlapnevwlYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLrkkkldqinrlvgqtvskeeetmrtpvrrynlhgslgDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVscyfhskyksshsstykRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDiegeeggeivfggvDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEsvidkssdkssdgvhdsAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
****FTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQT***********VRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYK******Y*RNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESV***************AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRL********VDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFY*
******AIRVALFLFLILSPAAFALPNDGLVRIGL*******************************************VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDK*********MCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSK**********RNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVI**************AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
*GTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLVKKRLFCCSLVIFISFHLFYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query492 2.2.26 [Sep-21-2011]
O65390506 Aspartic proteinase A1 OS yes no 0.902 0.877 0.700 0.0
Q8VYL3513 Aspartic proteinase A2 OS no no 0.932 0.894 0.660 0.0
O04057513 Aspartic proteinase OS=Cu N/A no 0.908 0.871 0.694 0.0
Q42456509 Aspartic proteinase oryza yes no 0.884 0.854 0.664 1e-177
P40782473 Cyprosin (Fragment) OS=Cy N/A no 0.851 0.885 0.678 1e-176
P42210508 Phytepsin OS=Hordeum vulg N/A no 0.861 0.834 0.662 1e-170
Q9XEC4508 Aspartic proteinase A3 OS no no 0.912 0.883 0.594 1e-170
Q9XFX3504 Procardosin-A OS=Cynara c N/A no 0.916 0.894 0.604 1e-163
Q9XFX4506 Procardosin-B OS=Cynara c N/A no 0.928 0.903 0.594 1e-161
P42211496 Aspartic proteinase OS=Or no no 0.841 0.834 0.589 1e-157
>sp|O65390|APA1_ARATH Aspartic proteinase A1 OS=Arabidopsis thaliana GN=APA1 PE=1 SV=1 Back     alignment and function desciption
 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/454 (70%), Positives = 384/454 (84%), Gaps = 10/454 (2%)

Query: 8   IRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNL 67
           + V+L +  +L  +AFA  NDG  R+GL+K KLD  NRL  +  SK+E+    P+R Y L
Sbjct: 8   VAVSLIVSFLLCFSAFAERNDGTFRVGLKKLKLDSKNRLAARVESKQEK----PLRAYRL 63

Query: 68  HGSLGDS-DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSC 126
               GDS D D+V L N++DAQY+GE++IGTP Q FTV+FDTGSSNLWVPS+KCYFS++C
Sbjct: 64  ----GDSGDADVVVLKNYLDAQYYGEIAIGTPPQKFTVVFDTGSSNLWVPSSKCYFSLAC 119

Query: 127 YFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI 186
             H KYKSS SSTY++NG +AAI YGTGAI+GFFS D V VGDLVVK+Q+FIEATKE  I
Sbjct: 120 LLHPKYKSSRSSTYEKNGKAAAIHYGTGAIAGFFSNDAVTVGDLVVKDQEFIEATKEPGI 179

Query: 187 TFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFG 246
           TF+ AKFDGILGLGFQEIS+GKA PVWYNML QGL+KEPVFSFWLNR+ + EEGGE+VFG
Sbjct: 180 TFVVAKFDGILGLGFQEISVGKAAPVWYNMLKQGLIKEPVFSFWLNRNADEEEGGELVFG 239

Query: 247 GVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 306
           GVDP+H+KG+HTYVPVT+KGYWQF+MGDVLI G  TG+C +GC+AIADSGTSLLAGPTTI
Sbjct: 240 GVDPNHFKGKHTYVPVTQKGYWQFDMGDVLIGGAPTGFCESGCSAIADSGTSLLAGPTTI 299

Query: 307 ITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMG 366
           IT INHAIGA+GV+SQ+CKT+VDQYG+TIL++L++ETQP+KICSQ+GLCTFDGTRG SMG
Sbjct: 300 ITMINHAIGAAGVVSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMG 359

Query: 367 IESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPN 426
           IESV+DK + K S+GV D+A CSACEMAV+W+Q++LR+N T ++ILNYVN+LC+RLPSP 
Sbjct: 360 IESVVDKENAKLSNGVGDAA-CSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPM 418

Query: 427 GESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWL 460
           GESAVDC  LS+MP VS TIGGKVFDLAP E  L
Sbjct: 419 GESAVDCAQLSTMPTVSLTIGGKVFDLAPEEYVL 452
Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles (By similarity). Possesses aspartic protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q8VYL3|APA2_ARATH Aspartic proteinase A2 OS=Arabidopsis thaliana GN=APA2 PE=1 SV=1 Back     alignment and function description
>sp|O04057|ASPR_CUCPE Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1 Back     alignment and function description
>sp|Q42456|ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2 Back     alignment and function description
>sp|P40782|CYPR1_CYNCA Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2 Back     alignment and function description
>sp|P42210|ASPR_HORVU Phytepsin OS=Hordeum vulgare PE=1 SV=1 Back     alignment and function description
>sp|Q9XEC4|APA3_ARATH Aspartic proteinase A3 OS=Arabidopsis thaliana GN=APA3 PE=1 SV=1 Back     alignment and function description
>sp|Q9XFX3|CARDA_CYNCA Procardosin-A OS=Cynara cardunculus GN=cardA PE=1 SV=1 Back     alignment and function description
>sp|Q9XFX4|CARDB_CYNCA Procardosin-B OS=Cynara cardunculus GN=cardB PE=1 SV=1 Back     alignment and function description
>sp|P42211|ASPRX_ORYSJ Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
255578112514 Aspartic proteinase precursor, putative 0.926 0.887 0.721 0.0
255567717456 Aspartic proteinase precursor, putative 0.920 0.993 0.716 0.0
224056377494 predicted protein [Populus trichocarpa] 0.884 0.880 0.735 0.0
359483345514 PREDICTED: aspartic proteinase isoform 2 0.878 0.840 0.751 0.0
225460913514 PREDICTED: aspartic proteinase [Vitis vi 0.932 0.892 0.702 0.0
449454758514 PREDICTED: aspartic proteinase-like [Cuc 0.918 0.879 0.703 0.0
12231174514 aspartic proteinase 2 [Nepenthes alata] 0.878 0.840 0.739 0.0
21616051514 aspartic proteinase [Theobroma cacao] 0.932 0.892 0.685 0.0
20800441513 aspartic proteinase [Vigna unguiculata] 0.930 0.892 0.689 0.0
109675118508 aspartic protease [Nicotiana tabacum] 0.922 0.893 0.704 0.0
>gi|255578112|ref|XP_002529926.1| Aspartic proteinase precursor, putative [Ricinus communis] gi|223530603|gb|EEF32480.1| Aspartic proteinase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/464 (72%), Positives = 399/464 (85%), Gaps = 8/464 (1%)

Query: 1   MGTKFTAIRVALFLFLILSP---AAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEET 57
           MGT F   + ALF  LIL P   A  +  NDGLVRIGL+K+K DQ NR+  Q  SKE E 
Sbjct: 1   MGTIF---KPALFFCLILLPLVCATASSSNDGLVRIGLKKRKFDQNNRVAAQFESKEGEA 57

Query: 58  MRTPVRRYNLHGSLGDS-DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVP 116
            R  +++Y++ G+LGD+ D DIV+L N+MDAQYFGE+ IGTP Q FTVIFDTGSSNLWVP
Sbjct: 58  FRASIKKYHIRGNLGDAEDIDIVSLKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVP 117

Query: 117 SAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQD 176
           S+KCYFSV+CYFHSKYKS  SSTYK+NG SA I YGTGAISGFFSQDNVKVG+LV+KNQ+
Sbjct: 118 SSKCYFSVACYFHSKYKSGQSSTYKKNGKSADIHYGTGAISGFFSQDNVKVGELVIKNQE 177

Query: 177 FIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236
           FIEAT+E SITFL AKFDGILGLGFQEIS+G A+PVWYNM++QGLVKEPVFSFW NR+ +
Sbjct: 178 FIEATREPSITFLVAKFDGILGLGFQEISVGNAVPVWYNMVNQGLVKEPVFSFWFNRNAD 237

Query: 237 GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSG 296
            +EGGEIVFGG+DP+HYKGEHTYVPVT+KGYWQF+MGDVLIDG+TTG CS+GC AIADSG
Sbjct: 238 EDEGGEIVFGGMDPNHYKGEHTYVPVTQKGYWQFDMGDVLIDGKTTGICSSGCAAIADSG 297

Query: 297 TSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356
           TSLLAGPTTIIT++NHAIGA+GV+SQECK +V QYG+TI+ ML+A+ QPQKICSQ+GLCT
Sbjct: 298 TSLLAGPTTIITEVNHAIGATGVVSQECKAVVAQYGETIIAMLLAKDQPQKICSQIGLCT 357

Query: 357 FDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVN 416
           FDG+RG SMGIESV+++   + + G+HD AMCS CEMAV+WMQN+L++N+T + ILNYVN
Sbjct: 358 FDGSRGVSMGIESVVNEKIQEVAGGLHD-AMCSTCEMAVVWMQNQLKQNQTQEHILNYVN 416

Query: 417 QLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWL 460
           +LC+RLPSP GESAVDC +LS+MPNVSFTIGG+VFDLAP +  L
Sbjct: 417 ELCERLPSPMGESAVDCGSLSTMPNVSFTIGGRVFDLAPEQYVL 460

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255567717|ref|XP_002524837.1| Aspartic proteinase precursor, putative [Ricinus communis] gi|223535897|gb|EEF37557.1| Aspartic proteinase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224056377|ref|XP_002298827.1| predicted protein [Populus trichocarpa] gi|222846085|gb|EEE83632.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359483345|ref|XP_003632941.1| PREDICTED: aspartic proteinase isoform 2 [Vitis vinifera] gi|359483347|ref|XP_002262915.2| PREDICTED: aspartic proteinase isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225460913|ref|XP_002279049.1| PREDICTED: aspartic proteinase [Vitis vinifera] gi|297737462|emb|CBI26663.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449454758|ref|XP_004145121.1| PREDICTED: aspartic proteinase-like [Cucumis sativus] gi|449472326|ref|XP_004153558.1| PREDICTED: aspartic proteinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|12231174|dbj|BAB20970.1| aspartic proteinase 2 [Nepenthes alata] Back     alignment and taxonomy information
>gi|21616051|emb|CAC86003.1| aspartic proteinase [Theobroma cacao] Back     alignment and taxonomy information
>gi|20800441|gb|AAB03843.2| aspartic proteinase [Vigna unguiculata] gi|33339734|gb|AAQ14346.1| aspartic proteinase [Vigna unguiculata] Back     alignment and taxonomy information
>gi|109675118|gb|ABG37021.1| aspartic protease [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
UNIPROTKB|B9RXH6511 RCOM_0903730 "Aspartic protein 0.951 0.915 0.616 3.8e-156
TAIR|locus:2008940506 APA1 "aspartic proteinase A1" 0.896 0.871 0.636 6.5e-154
TAIR|locus:2018037513 AT1G62290 [Arabidopsis thalian 0.924 0.886 0.593 3e-149
TAIR|locus:2137189508 AT4G04460 [Arabidopsis thalian 0.928 0.899 0.532 9.5e-137
DICTYBASE|DDB_G0279411383 ctsD "cathepsin D" [Dictyostel 0.552 0.710 0.464 8.7e-67
FB|FBgn0029093392 cathD "cathD" [Drosophila mela 0.601 0.755 0.438 6.1e-66
UNIPROTKB|O93428396 ctsd "Cathepsin D" [Chionodrac 0.621 0.772 0.403 3.3e-65
UNIPROTKB|Q05744398 CTSD "Cathepsin D" [Gallus gal 0.670 0.829 0.394 3.7e-64
RGD|621511407 Ctsd "cathepsin D" [Rattus nor 0.597 0.722 0.409 1.1e-62
WB|WBGene00000217444 asp-4 [Caenorhabditis elegans 0.489 0.542 0.479 3.3e-61
UNIPROTKB|B9RXH6 RCOM_0903730 "Aspartic proteinase, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
 Identities = 291/472 (61%), Positives = 350/472 (74%)

Query:     1 MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRT 60
             MGT F  + + LFL  +LS    + PNDGLVR+GL+K KLD+ +RL  +  SK  E +R 
Sbjct:     1 MGTNFKPLVLFLFLSSLLSSLVSSAPNDGLVRLGLKKMKLDENSRLAARLESKNAEALRA 60

Query:    61 PVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120
              VR+Y L G     DTDIVAL N++DAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS+KC
Sbjct:    61 SVRKYGLRGD--SKDTDIVALKNYLDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSSKC 118

Query:   121 YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEA 180
              FSV                 +NG SA I YG+GAISGFFS DNV VG+LVVK+Q+FIEA
Sbjct:   119 IFSVACFFHSRYKSGQSSTYKKNGKSAEIHYGSGAISGFFSSDNVVVGNLVVKDQEFIEA 178

Query:   181 TKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDXXXXXX 240
             TKE  +TF+AAKFDGILGLGFQEIS+G A+PVWYNM+ QGL+KEPVFSFWLNR+      
Sbjct:   179 TKEPGVTFVAAKFDGILGLGFQEISVGNAVPVWYNMIKQGLIKEPVFSFWLNRNTQGEEG 238

Query:   241 XXXXXXXXDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLL 300
                     D +HYKG+HTYVPVT+KGYWQFEMGDVLI  + T YC+ GC+AIADSGTSLL
Sbjct:   239 GEIVFGGVDLNHYKGKHTYVPVTQKGYWQFEMGDVLIGHKPTEYCAGGCSAIADSGTSLL 298

Query:   301 AGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGT 360
             AGPTT++T IN AIGA+GV SQECKT++ QYG+TI+++LIAE QP+KICSQ+GLCTFDGT
Sbjct:   299 AGPTTVVTLINEAIGATGVASQECKTVIAQYGETIMDLLIAEAQPKKICSQIGLCTFDGT 358

Query:   361 RGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCD 420
             RG SMGI+                 AMCSACEM V+WMQN+LR N+T D+ILNYVN+LCD
Sbjct:   359 RGVSMGIQSVVDDNNDKSSGIVRD-AMCSACEMTVVWMQNQLRENQTQDRILNYVNELCD 417

Query:   421 RLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFEGSMLHLV 472
             R+P+P GES VDC ++SSMP VSFTIGGKVFDL+P E  L    EG+    +
Sbjct:   418 RIPNPLGESIVDCGSISSMPVVSFTIGGKVFDLSPQEYILKVG-EGAQAQCI 468
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2008940 APA1 "aspartic proteinase A1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018037 AT1G62290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137189 AT4G04460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279411 ctsD "cathepsin D" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0029093 cathD "cathD" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|O93428 ctsd "Cathepsin D" [Chionodraco hamatus (taxid:36188)] Back     alignment and assigned GO terms
UNIPROTKB|Q05744 CTSD "Cathepsin D" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|621511 Ctsd "cathepsin D" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
WB|WBGene00000217 asp-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04057ASPR_CUCPE3, ., 4, ., 2, 3, ., -0.69400.90850.8713N/Ano
Q42456ASPR1_ORYSJ3, ., 4, ., 2, 3, ., -0.66430.88410.8546yesno
Q9XFX3CARDA_CYNCA3, ., 4, ., 2, 3, ., -0.60430.91660.8948N/Ano
O65390APA1_ARATH3, ., 4, ., 2, 3, ., -0.70040.90240.8774yesno
Q9XFX4CARDB_CYNCA3, ., 4, ., 2, 3, ., -0.59440.92880.9031N/Ano
P42210ASPR_HORVU3, ., 4, ., 2, 3, ., 4, 00.66280.86170.8346N/Ano
P40782CYPR1_CYNCA3, ., 4, ., 2, 3, ., -0.67840.85160.8858N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 1e-177
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 1e-113
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-108
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 8e-98
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-97
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 3e-90
cd05487326 cd05487, renin_like, Renin stimulates production o 3e-88
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-87
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 1e-83
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 5e-80
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 5e-62
PTZ00013450 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisiona 1e-44
PTZ00147453 PTZ00147, PTZ00147, plasmepsin-1; Provisional 3e-44
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 6e-39
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 1e-37
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-28
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 3e-28
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 3e-15
pfam0348935 pfam03489, SapB_2, Saposin-like type B, region 2 5e-12
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-11
pfam0518439 pfam05184, SapB_1, Saposin-like type B, region 1 8e-11
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 7e-09
smart0074176 smart00741, SapB, Saposin (B) Domains 2e-07
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-06
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 7e-05
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 2e-04
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 4e-04
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 5e-04
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 7e-04
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 0.001
smart0074176 smart00741, SapB, Saposin (B) Domains 0.002
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information 
 Score =  500 bits (1289), Expect = e-177
 Identities = 193/236 (81%), Positives = 219/236 (92%)

Query: 79  VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSS 138
           VAL N++DAQYFGE+ IGTP Q FTVIFDTGSSNLWVPS+KCYFS++CYFHSKYKSS SS
Sbjct: 1   VALKNYLDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYKSSKSS 60

Query: 139 TYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILG 198
           TYK+NGTSA+IQYGTG+ISGFFSQD+V VGDLVVKNQ FIEATKE  +TFL AKFDGILG
Sbjct: 61  TYKKNGTSASIQYGTGSISGFFSQDSVTVGDLVVKNQVFIEATKEPGLTFLLAKFDGILG 120

Query: 199 LGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHT 258
           LGFQEIS+GKA+PVWYNM++QGLVKEPVFSFWLNR+ + EEGGE+VFGGVDP H+KGEHT
Sbjct: 121 LGFQEISVGKAVPVWYNMVEQGLVKEPVFSFWLNRNPDEEEGGELVFGGVDPKHFKGEHT 180

Query: 259 YVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI 314
           YVPVT+KGYWQFEMGDVLI G++TG+C+ GC AIADSGTSLLAGPTTI+TQIN A+
Sbjct: 181 YVPVTRKGYWQFEMGDVLIGGKSTGFCAGGCAAIADSGTSLLAGPTTIVTQINSAV 236

Phytepsin, a plant homolog of mammalian lysosomal pepsins, resides in grains, roots, stems, leaves and flowers. Phytepsin may participate in metabolic turnover and in protein processing events. In addition, it highly expressed in several plant tissues undergoing apoptosis. Phytepsin contains an internal region consisting of about 100 residues not present in animal or microbial pepsins. This region is thus called a plant specific insert. The insert is highly similar to saponins, which are lysosomal sphingolipid-activating proteins in mammalian cells. The saponin-like domain may have a role in the vacuolar targeting of phytepsin. Phytepsin, as its animal counterparts, possesses a topology typical of all aspartic proteases. They are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe has probably evolved from the other through a gene duplication event in the distant past. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 317
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|140051 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>gnl|CDD|140176 PTZ00147, PTZ00147, plasmepsin-1; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|112314 pfam03489, SapB_2, Saposin-like type B, region 2 Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|191220 pfam05184, SapB_1, Saposin-like type B, region 1 Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|214797 smart00741, SapB, Saposin (B) Domains Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|214797 smart00741, SapB, Saposin (B) Domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 492
PTZ00165482 aspartyl protease; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.87
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.85
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.04
PF0518439 SapB_1: Saposin-like type B, region 1; InterPro: I 98.11
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.93
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.15
PF1365090 Asp_protease_2: Aspartyl protease 96.5
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 95.26
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.0
smart0074176 SapB Saposin (B) Domains. Present in multiple copi 93.98
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.29
COG3577215 Predicted aspartyl protease [General function pred 93.22
PF0348935 SapB_2: Saposin-like type B, region 2; InterPro: I 91.18
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 90.59
PF0796629 A1_Propeptide: A1 Propeptide ; InterPro: IPR012848 90.13
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 82.38
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 80.97
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-54  Score=458.93  Aligned_cols=284  Identities=36%  Similarity=0.634  Sum_probs=234.8

Q ss_pred             ceEEEeeeecCcchhhhcccCcccchhhhcccccccccCCCCCCCCCcceEeccccCCceEEEEEEEcCCCceEEEEEeC
Q 011143           29 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDT  108 (492)
Q Consensus        29 ~~~ripL~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDT  108 (492)
                      .++||||+|.++.|+...+.+...-..+++.  .+.+.........+...+||.|+.|.+|+++|+||||||+|+|++||
T Consensus        63 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~I~IGTPpQ~f~Vv~DT  140 (482)
T PTZ00165         63 PAHKVELHRFALLKKKRKKNSEKGYISRVLT--KHKYLETKDPNGLQYLQQDLLNFHNSQYFGEIQVGTPPKSFVVVFDT  140 (482)
T ss_pred             heEEeeeEEcchHHHhhhhHHHHHhhhhhhh--ccccccccccccccccceecccccCCeEEEEEEeCCCCceEEEEEeC
Confidence            6899999998877765544311100001111  11111000000013467999999999999999999999999999999


Q ss_pred             CCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeE--CCe---eEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEec
Q 011143          109 GSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR--NGT---SAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKE  183 (492)
Q Consensus       109 GSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~--~~~---~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~  183 (492)
                      ||+++||++..|. ..+|..++.|||++|+||+.  .+.   .+.+.||+|++.|.++.|+|++|+.++++|.||++...
T Consensus       141 GSS~lWVps~~C~-~~~C~~~~~yd~s~SSTy~~~~~~~~~~~~~i~YGsGs~~G~l~~DtV~ig~l~i~~q~FG~a~~~  219 (482)
T PTZ00165        141 GSSNLWIPSKECK-SGGCAPHRKFDPKKSSTYTKLKLGDESAETYIQYGTGECVLALGKDTVKIGGLKVKHQSIGLAIEE  219 (482)
T ss_pred             CCCCEEEEchhcC-cccccccCCCCccccCCcEecCCCCccceEEEEeCCCcEEEEEEEEEEEECCEEEccEEEEEEEec
Confidence            9999999999996 56899999999999999998  655   67899999999999999999999999999999999987


Q ss_pred             ccccccccccceEEeccccccc---cCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCc--ccccE
Q 011143          184 ASITFLAAKFDGILGLGFQEIS---IGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--KGEHT  258 (492)
Q Consensus       184 ~~~~~~~~~~dGILGLG~~~~s---~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y--~G~l~  258 (492)
                      .+..|....+|||||||++..+   .....|++++|++||+|++++||+||.++.+  .+|+|+|||+|++++  .|++.
T Consensus       220 s~~~f~~~~~DGILGLg~~~~s~~s~~~~~p~~~~l~~qgli~~~~FS~yL~~~~~--~~G~l~fGGiD~~~~~~~g~i~  297 (482)
T PTZ00165        220 SLHPFADLPFDGLVGLGFPDKDFKESKKALPIVDNIKKQNLLKRNIFSFYMSKDLN--QPGSISFGSADPKYTLEGHKIW  297 (482)
T ss_pred             cccccccccccceeecCCCcccccccCCCCCHHHHHHHcCCcccceEEEEeccCCC--CCCEEEeCCcCHHHcCCCCceE
Confidence            6656666788999999998773   3457889999999999999999999986532  379999999999877  57899


Q ss_pred             EEecccccceEEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCC
Q 011143          259 YVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS  317 (492)
Q Consensus       259 ~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~  317 (492)
                      |+|+.+.+||++.+++|+||++.+..+...+.||+||||+++++|++++++|.+++++.
T Consensus       298 ~~Pv~~~~yW~i~l~~i~vgg~~~~~~~~~~~aIiDTGTSli~lP~~~~~~i~~~i~~~  356 (482)
T PTZ00165        298 WFPVISTDYWEIEVVDILIDGKSLGFCDRKCKAAIDTGSSLITGPSSVINPLLEKIPLE  356 (482)
T ss_pred             EEEccccceEEEEeCeEEECCEEeeecCCceEEEEcCCCccEeCCHHHHHHHHHHcCCc
Confidence            99999999999999999999988776667789999999999999999999999998765

>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>smart00741 SapB Saposin (B) Domains Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF03489 SapB_2: Saposin-like type B, region 2; InterPro: IPR008138 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes [] Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF07966 A1_Propeptide: A1 Propeptide ; InterPro: IPR012848 Most eukaryotic endopeptidases (MEROPS peptidase family A1) are synthesised with signal and propeptides Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
1qdm_A478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 1e-154
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 6e-77
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 5e-50
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 6e-50
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 1e-49
3d91_A341 Human Renin In Complex With Remikiren Length = 341 1e-49
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 1e-49
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 2e-49
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 2e-49
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 3e-49
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 6e-46
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 3e-45
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 4e-45
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 4e-45
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 4e-45
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 5e-45
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 3e-44
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 3e-44
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 3e-44
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 4e-44
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 5e-44
1htr_B329 Crystal And Molecular Structures Of Human Progastri 4e-43
1flh_A326 Crystal Structure Of Human Uropepsin At 2.45 A Reso 8e-43
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 8e-43
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 3e-42
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 1e-40
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 2e-40
3oad_A166 Design And Optimization Of New Piperidines As Renin 1e-36
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 2e-36
1lya_B241 Crystal Structures Of Native And Inhibited Forms Of 2e-29
1ls5_A328 Crystal Structure Of Plasmepsin Iv From P. Falcipar 2e-29
2anl_A327 X-Ray Crystal Structure Of The Aspartic Protease Pl 3e-29
3qrv_A336 Crystal Structure Of Plasmepsin I (Pmi) From Plasmo 1e-27
1miq_A375 Crystal Structure Of Proplasmepsin From The Human M 6e-27
2bju_A453 Plasmepsin Ii Complexed With A Highly Active Achira 8e-27
1pfz_A380 Proplasmepsin Ii From Plasmodium Falciparum Length 1e-26
1m43_A331 Crystal Structure Of Pmii In Complex With Pepstatin 2e-26
1sme_A329 Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From P 2e-26
3f9q_A329 Re-Refinement Of Uncomplexed Plasmepsin Ii From Pla 2e-26
1lf3_A331 Crystal Structure Of Plasmepsin Ii From P Falciparu 2e-26
1qs8_B329 Crystal Structure Of The P. Vivax Aspartic Proteina 2e-26
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 1e-24
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 1e-24
3rfi_A108 Crystal Structure Of The Saposin-Like Domain Of Pla 2e-22
1lyw_A97 Cathepsin D At Ph 7.5 Length = 97 3e-19
3qvc_A451 Crystal Structure Of Histo-Aspartic Protease (Hap) 8e-17
3fns_A332 Crystal Structure Of Histo-Aspartic Protease (Hap) 9e-17
1mpp_A361 X-Ray Analyses Of Aspartic Proteinases. V. Structur 8e-14
2rmp_A361 Rmp-Pepstatin A Complex Length = 361 5e-12
1gkt_A329 Neutron Laue Diffraction Structure Of Endothiapepsi 8e-12
1gvt_A329 Endothiapepsin Complex With Cp-80,794 Length = 329 8e-12
3liz_A334 Crystal Structure Of Bla G 2 Complexed With Fab 4c3 1e-11
1yg9_A330 The Structure Of Mutant (N93q) Of Bla G 2 Length = 2e-11
1epr_E330 Endothia Aspartic Proteinase (Endothiapepsin) Compl 4e-11
1er8_E330 The Active Site Of Aspartic Proteinases Length = 33 5e-11
1wkr_A340 Crystal Structure Of Aspartic Proteinase From Irpex 2e-10
1j71_A334 Structure Of The Extracellular Aspartic Proteinase 5e-10
2qzx_A342 Secreted Aspartic Proteinase (Sap) 5 From Candida A 6e-10
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 8e-10
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 1e-09
3oad_B176 Design And Optimization Of New Piperidines As Renin 2e-08
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 1e-07
3c9x_A329 Crystal Structure Of Trichoderma Reesei Aspartic Pr 1e-07
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 1e-07
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 2e-07
2h6s_A340 Secreted Aspartic Proteinase (sap) 3 From Candida A 3e-07
1izd_A323 Crystal Structure Of Aspergillus Oryzae Aspartic Pr 6e-07
1ppl_E323 Crystallographic Analysis Of Transition-State Mimic 6e-07
1ibq_A325 Aspergillopepsin From Aspergillus Phoenicis Length 3e-06
1tqf_A405 Crystal Structure Of Human Beta Secretase Complexed 2e-05
3exo_A413 Crystal Structure Of Bace1 Bound To Inhibitor Lengt 2e-05
2qzl_A411 Crystal Structure Of Human Beta Secretase Complexed 2e-05
1b5f_B87 Native Cardosin A From Cynara Cardunculus L. Length 2e-05
2qyp_A91 Orthorhombic Crystal Structure Of Human Saposin C D 3e-05
3qi1_A408 Design And Synthesis Of Hydroxyethylamine (Hea) Bac 3e-05
3tpj_A433 Apo Structure Of Bace1 Length = 433 4e-05
4b1c_A375 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 5e-05
2z9a_A88 Crystal Structure Of Human Saposin C Dimer In Open 7e-05
1m12_A84 Nmr Solution Structure Of Human Saposin C Length = 7e-05
2q15_A385 Structure Of Bace Complexed To Compound 3a Length = 8e-05
2vie_A392 Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- 8e-05
2gtg_A83 Crystal Structure Of Human Saposin C Length = 83 9e-05
2q11_A388 Structure Of Bace Complexed To Compound 1 Length = 9e-05
2zjj_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-04
3dm6_A406 Beta-Secretase 1 Complexed With Statine-Based Inhib 1e-04
3ixk_A405 Potent Beta-Secretase 1 Inhibitor Length = 405 1e-04
3l58_A414 Structure Of Bace Bound To Sch589432 Length = 414 1e-04
2zjh_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-04
2zji_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-04
2zjn_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-04
2hm1_A406 Crystal Structure Of Human Beta-Secretase (Bace) In 1e-04
1fkn_A391 Structure Of Beta-Secretase Complexed With Inhibito 1e-04
2zhr_A411 Crystal Structure Of Bace1 In Complex With Om99-2 A 1e-04
2fdp_A388 Crystal Structure Of Beta-Secretase Complexed With 1e-04
4ewo_A386 Design And Synthesis Of Potent Hydroxyethylamine (H 1e-04
3hvg_A411 Structure Of Bace (Beta Secretase) In Complex With 1e-04
1w50_A411 Apo Structure Of Bace (beta Secretase) Length = 411 1e-04
3kmx_A395 Structure Of Bace Bound To Sch346572 Length = 395 1e-04
4dpf_A391 Bace-1 In Complex With A Hea-Macrocyclic Type Inhib 1e-04
1ym4_A408 Crystal Structure Of Human Beta Secretase Complexed 1e-04
3ckp_A412 Crystal Structure Of Bace-1 In Complex With Inhibit 1e-04
2wjo_A412 Human Bace (Beta Secretase) In Complex With Cyclohe 1e-04
3cib_A390 Structure Of Bace Bound To Sch727596 Length = 390 1e-04
3u6a_A390 Rational Design And Synthesis Of Aminopiperazinones 1e-04
1sgz_A389 Crystal Structure Of Unbound Beta-Secretase Catalyt 1e-04
4b1d_A388 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 1e-04
3vv6_A416 Crystal Structure Of Beta Secetase In Complex With 1e-04
2qk5_A395 Structure Of Bace1 Bound To Sch626485 Length = 395 1e-04
1ym2_A402 Crystal Structure Of Human Beta Secretase Complexed 1e-04
2zjk_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-04
2of0_A402 X-Ray Crystal Structure Of Beta Secretase Complexed 1e-04
3udh_A404 Crystal Structure Of Bace With Compound 1 Length = 1e-04
2qu2_A415 Bace1 With Compound 1 Length = 415 1e-04
3tpr_A433 Crystal Structure Of Bace1 Complexed With An Inhibi 2e-04
2hiz_A455 Crystal Structure Of Human Beta-Secretase (Bace) In 2e-04
3r1g_B402 Structure Basis Of Allosteric Inhibition Of Bace1 B 2e-04
2va5_A455 X-Ray Crystal Structure Of Beta Secretase Complexed 2e-04
3lpi_A455 Structure Of Bace Bound To Sch745132 Length = 455 2e-04
3bra_A409 Bace-1 Complexed With Compound 1 Length = 409 2e-04
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 262/433 (60%), Positives = 319/433 (73%), Gaps = 12/433 (2%)
Query: 31  VRIGLRKKKLDQINRLVGQTVSKEEETMRT---PVRRYNLHGSLGDSDTDIVALNNFMDA 87
           VRI L+K+ +D+ +R+       EE+ + +   P+R         + + DIVAL N+M+A
Sbjct: 1   VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRS--------EEEGDIVALKNYMNA 52
Query: 88  QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSA 147
           QYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  A
Sbjct: 53  QYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPA 112
Query: 148 AIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG 207
           AIQYGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AKFDGILGLGF+EIS+G
Sbjct: 113 AIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172
Query: 208 KAIPVWYNMLDQGLVKEPVFSFWLNRDXXXXXXXXXXXXXXDPDHYKGEHTYVPVTKKGY 267
           KA+PVWY M++QGLV +PVFSFWLNR               DP HY GEHTYVPVT+KGY
Sbjct: 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGY 232
Query: 268 WQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTL 327
           WQF+MGDVL+ G++TG+C+ GC AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+
Sbjct: 233 WQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTI 292
Query: 328 VDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAM 387
           V QYG+ IL++L+AETQP+KICSQ+GLCTFDGTRG S GI                   M
Sbjct: 293 VSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIR-SVVDDEPVKSNGLRADPM 351
Query: 388 CSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIG 447
           CSACEMAV+WMQN+L +N+T D IL+YVNQLC+RLPSP GESAVDC +L SMP++ FTIG
Sbjct: 352 CSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIG 411
Query: 448 GKVFDLAPNEVWL 460
           GK F L P E  L
Sbjct: 412 GKKFALKPEEYIL 424
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|1LYA|B Chain B, Crystal Structures Of Native And Inhibited Forms Of Human Cathepsin D: Implications For Lysosomal Targeting And Drug Design Length = 241 Back     alignment and structure
>pdb|1LS5|A Chain A, Crystal Structure Of Plasmepsin Iv From P. Falciparum In Complex With Pepstatin A Length = 328 Back     alignment and structure
>pdb|2ANL|A Chain A, X-Ray Crystal Structure Of The Aspartic Protease Plasmepsin 4 From The Malarial Parasite Plasmodium Malariae Bound To An Allophenylnorstatine Based Inhibitor Length = 327 Back     alignment and structure
>pdb|3QRV|A Chain A, Crystal Structure Of Plasmepsin I (Pmi) From Plasmodium Falciparum Length = 336 Back     alignment and structure
>pdb|1MIQ|A Chain A, Crystal Structure Of Proplasmepsin From The Human Malarial Pathogen Plasmodium Vivax Length = 375 Back     alignment and structure
>pdb|2BJU|A Chain A, Plasmepsin Ii Complexed With A Highly Active Achiral Inhibitor Length = 453 Back     alignment and structure
>pdb|1PFZ|A Chain A, Proplasmepsin Ii From Plasmodium Falciparum Length = 380 Back     alignment and structure
>pdb|1M43|A Chain A, Crystal Structure Of Pmii In Complex With Pepstatin A To 2.4 A Length = 331 Back     alignment and structure
>pdb|1SME|A Chain A, Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From Plasmodium Falciparum, In Complex With Pepstatin A Length = 329 Back     alignment and structure
>pdb|3F9Q|A Chain A, Re-Refinement Of Uncomplexed Plasmepsin Ii From Plasmodium Falciparum Length = 329 Back     alignment and structure
>pdb|1LF3|A Chain A, Crystal Structure Of Plasmepsin Ii From P Falciparum In Complex With Inhibitor Eh58 Length = 331 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|3RFI|A Chain A, Crystal Structure Of The Saposin-Like Domain Of Plant Aspartic Protease From Solanum Tuberosum Length = 108 Back     alignment and structure
>pdb|1LYW|A Chain A, Cathepsin D At Ph 7.5 Length = 97 Back     alignment and structure
>pdb|3QVC|A Chain A, Crystal Structure Of Histo-Aspartic Protease (Hap) Zymogen From Plasmodium Falciparum Length = 451 Back     alignment and structure
>pdb|3FNS|A Chain A, Crystal Structure Of Histo-Aspartic Protease (Hap) From Plasmodium Falciparum Length = 332 Back     alignment and structure
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And Refinement At 2.0 Angstroms Resolution Of The Aspartic Proteinase From Mucor Pusillus Length = 361 Back     alignment and structure
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex Length = 361 Back     alignment and structure
>pdb|1GKT|A Chain A, Neutron Laue Diffraction Structure Of Endothiapepsin Complexed With Transition State Analogue Inhibitor H261 Length = 329 Back     alignment and structure
>pdb|1GVT|A Chain A, Endothiapepsin Complex With Cp-80,794 Length = 329 Back     alignment and structure
>pdb|3LIZ|A Chain A, Crystal Structure Of Bla G 2 Complexed With Fab 4c3 Length = 334 Back     alignment and structure
>pdb|1YG9|A Chain A, The Structure Of Mutant (N93q) Of Bla G 2 Length = 330 Back     alignment and structure
>pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed With Pd-135, 040 Length = 330 Back     alignment and structure
>pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases Length = 330 Back     alignment and structure
>pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex Lacteus Length = 340 Back     alignment and structure
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From Candida Tropicalis Yeast Length = 334 Back     alignment and structure
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans Length = 342 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|3OAD|B Chain B, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 176 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|3C9X|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic Proteinase Length = 329 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 Back     alignment and structure
>pdb|1IZD|A Chain A, Crystal Structure Of Aspergillus Oryzae Aspartic Proteinase Length = 323 Back     alignment and structure
>pdb|1PPL|E Chain E, Crystallographic Analysis Of Transition-State Mimics Bound To Penicillopepsin: Phosphorus-Containing Peptide Analogues Length = 323 Back     alignment and structure
>pdb|1IBQ|A Chain A, Aspergillopepsin From Aspergillus Phoenicis Length = 325 Back     alignment and structure
>pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 Back     alignment and structure
>pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 Back     alignment and structure
>pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 Back     alignment and structure
>pdb|1B5F|B Chain B, Native Cardosin A From Cynara Cardunculus L. Length = 87 Back     alignment and structure
>pdb|2QYP|A Chain A, Orthorhombic Crystal Structure Of Human Saposin C Dimer In Open Conformation Length = 91 Back     alignment and structure
>pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 Back     alignment and structure
>pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 Back     alignment and structure
>pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 Back     alignment and structure
>pdb|2Z9A|A Chain A, Crystal Structure Of Human Saposin C Dimer In Open Conformation Length = 88 Back     alignment and structure
>pdb|1M12|A Chain A, Nmr Solution Structure Of Human Saposin C Length = 84 Back     alignment and structure
>pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 Back     alignment and structure
>pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 Back     alignment and structure
>pdb|2GTG|A Chain A, Crystal Structure Of Human Saposin C Length = 83 Back     alignment and structure
>pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 Back     alignment and structure
>pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 Back     alignment and structure
>pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 Back     alignment and structure
>pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 Back     alignment and structure
>pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 Back     alignment and structure
>pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 Back     alignment and structure
>pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 Back     alignment and structure
>pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 Back     alignment and structure
>pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 Back     alignment and structure
>pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 Back     alignment and structure
>pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 Back     alignment and structure
>pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 Back     alignment and structure
>pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 Back     alignment and structure
>pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 Back     alignment and structure
>pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 Back     alignment and structure
>pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 Back     alignment and structure
>pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 Back     alignment and structure
>pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 Back     alignment and structure
>pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 Back     alignment and structure
>pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 Back     alignment and structure
>pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 Back     alignment and structure
>pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 Back     alignment and structure
>pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 Back     alignment and structure
>pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 Back     alignment and structure
>pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 Back     alignment and structure
>pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 Back     alignment and structure
>pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 Back     alignment and structure
>pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 Back     alignment and structure
>pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 Back     alignment and structure
>pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 Back     alignment and structure
>pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 Back     alignment and structure
>pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 Back     alignment and structure
>pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 Back     alignment and structure
>pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 Back     alignment and structure
>pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 Back     alignment and structure
>pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 Back     alignment and structure
>pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 0.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 1e-145
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-139
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 6e-04
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-138
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 7e-06
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-136
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-04
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-136
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-05
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 1e-135
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 1e-04
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 1e-133
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 7e-05
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-133
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-05
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-133
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-04
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-131
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 6e-05
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-131
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-04
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-130
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-130
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-124
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-122
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 4e-05
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-122
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 1e-117
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-114
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-113
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-113
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-110
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 6e-04
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-108
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-108
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-107
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 6e-04
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-106
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 1e-103
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-103
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 1e-100
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 3e-79
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-05
3rfi_A108 Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber 3e-45
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 8e-45
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-26
3bqp_A80 Proactivator polypeptide; saposin, sphingolipid ac 1e-15
3bqp_A80 Proactivator polypeptide; saposin, sphingolipid ac 7e-09
2gtg_A83 Proactivator polypeptide; saposin, sphingolipid ac 3e-15
2gtg_A83 Proactivator polypeptide; saposin, sphingolipid ac 1e-09
2qyp_A91 Proactivator polypeptide; saposin, activator prote 4e-15
2qyp_A91 Proactivator polypeptide; saposin, activator prote 2e-09
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-11
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 4e-11
1nkl_A78 NK-lysin; saposin fold, antibacterial peptide, tum 7e-10
1nkl_A78 NK-lysin; saposin fold, antibacterial peptide, tum 5e-04
4ddj_A83 Saposin-A, protein A; saposin fold, sphingolipid a 2e-09
4ddj_A83 Saposin-A, protein A; saposin fold, sphingolipid a 6e-09
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1n69_A81 Saposin B; lipid binding protein, glycosphingolipi 2e-06
2js9_A99 Saposin-like protein family protein 5; caenopore-5 5e-04
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
 Score =  523 bits (1348), Expect = 0.0
 Identities = 284/427 (66%), Positives = 350/427 (81%), Gaps = 6/427 (1%)

Query: 31  VRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYF 90
           VRI L+K+ +D+ +R+       EE+ + +            + + DIVAL N+M+AQYF
Sbjct: 1   VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLR-----SEEEGDIVALKNYMNAQYF 55

Query: 91  GEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQ 150
           GE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS++CY HS+YK+  SSTYK+NG  AAIQ
Sbjct: 56  GEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQ 115

Query: 151 YGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAI 210
           YGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AKFDGILGLGF+EIS+GKA+
Sbjct: 116 YGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAV 175

Query: 211 PVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQF 270
           PVWY M++QGLV +PVFSFWLNR ++  EGGEI+FGG+DP HY GEHTYVPVT+KGYWQF
Sbjct: 176 PVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQF 235

Query: 271 EMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQ 330
           +MGDVL+ G++TG+C+ GC AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+V Q
Sbjct: 236 DMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQ 295

Query: 331 YGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSA 390
           YG+ IL++L+AETQP+KICSQ+GLCTFDGTRG S GI SV+D    KS+ G+    MCSA
Sbjct: 296 YGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSN-GLRADPMCSA 354

Query: 391 CEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKV 450
           CEMAV+WMQN+L +N+T D IL+YVNQLC+RLPSP GESAVDC +L SMP++ FTIGGK 
Sbjct: 355 CEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKK 414

Query: 451 FDLAPNE 457
           F L P E
Sbjct: 415 FALKPEE 421
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum} Length = 108 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Length = 80 Back     alignment and structure
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Length = 80 Back     alignment and structure
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A Length = 83 Back     alignment and structure
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A Length = 83 Back     alignment and structure
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Length = 91 Back     alignment and structure
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Length = 91 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1 Length = 78 Back     alignment and structure
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1 Length = 78 Back     alignment and structure
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A* Length = 83 Back     alignment and structure
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A* Length = 83 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3 Length = 81 Back     alignment and structure
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A Length = 99 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.89
3rfi_A108 Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuber 99.65
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 98.03
3bqp_A80 Proactivator polypeptide; saposin, sphingolipid ac 97.87
2qyp_A91 Proactivator polypeptide; saposin, activator prote 97.85
4ddj_A83 Saposin-A, protein A; saposin fold, sphingolipid a 97.71
1of9_A77 Pore-forming peptide ameobapore A; toxin, saplip, 97.55
2gtg_A83 Proactivator polypeptide; saposin, sphingolipid ac 97.48
1n69_A81 Saposin B; lipid binding protein, glycosphingolipi 97.32
2js9_A99 Saposin-like protein family protein 5; caenopore-5 97.26
1l9l_A74 Granulysin; saposin fold, membrane-lytic, antimicr 97.26
1nkl_A78 NK-lysin; saposin fold, antibacterial peptide, tum 97.25
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.54
2qyp_A91 Proactivator polypeptide; saposin, activator prote 87.18
3vcm_P43 Prorenin; aspartic proteases, hydrolase; HET: NAG; 85.89
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 85.72
3bqp_A80 Proactivator polypeptide; saposin, sphingolipid ac 84.63
2js9_A99 Saposin-like protein family protein 5; caenopore-5 81.04
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
Probab=100.00  E-value=4.6e-76  Score=626.59  Aligned_cols=427  Identities=67%  Similarity=1.184  Sum_probs=356.4

Q ss_pred             EEEeeeecCcchhhhcccCcccchhh-hcccccccccCCCCCC-CCCcceEeccccCCceEEEEEEEcCCCceEEEEEeC
Q 011143           31 VRIGLRKKKLDQINRLVGQTVSKEEE-TMRTPVRRYNLHGSLG-DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDT  108 (492)
Q Consensus        31 ~ripL~r~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDT  108 (492)
                      +||||+|+++.++.+.+.+.....++ +++    ++.   ..+ .++...+||.|+.+.+|+++|+||||||+|+|+|||
T Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DT   73 (478)
T 1qdm_A            1 VRIALKKRPIDRNSRVATGLSGGEEQPLLS----GAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDT   73 (478)
T ss_dssp             CEEEEEECCCCHHHHHHHHTC-----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEET
T ss_pred             CeeeeeeccchHHHHHhcchhhhhHHHHHh----hcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcC
Confidence            48999999999998877554322222 221    110   011 123567999999999999999999999999999999


Q ss_pred             CCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEecccccc
Q 011143          109 GSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITF  188 (492)
Q Consensus       109 GSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~  188 (492)
                      ||+++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|++++.+++++.||++....+..|
T Consensus        74 GSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f  153 (478)
T 1qdm_A           74 GSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITF  153 (478)
T ss_dssp             TCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHH
T ss_pred             CCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCccc
Confidence            99999999999964568999999999999999999999999999999999999999999999999999999998766556


Q ss_pred             cccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccce
Q 011143          189 LAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYW  268 (492)
Q Consensus       189 ~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w  268 (492)
                      ....++||||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|++.|+|+.+.+||
T Consensus       154 ~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w  233 (478)
T 1qdm_A          154 LVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYW  233 (478)
T ss_dssp             HHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTE
T ss_pred             ccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeE
Confidence            66778999999999988777888999999999999999999998864333489999999999999999999999999999


Q ss_pred             EEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcccc
Q 011143          269 QFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKI  348 (492)
Q Consensus       269 ~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~  348 (492)
                      .|.+++|.||++.+.++..+..+||||||+++++|.+++++|.+++++.+.++.+|+..+..||+.++++++++..|+.+
T Consensus       234 ~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~v  313 (478)
T 1qdm_A          234 QFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKI  313 (478)
T ss_dssp             EEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHH
T ss_pred             EEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhh
Confidence            99999999999887666678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccc
Q 011143          349 CSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGE  428 (492)
Q Consensus       349 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~  428 (492)
                      |++.|+|.+.+....+++++++++++.+++ .+.+++.+|++|||+|.|++|+|.+|.|.++|+++++++|.+++.+.|.
T Consensus       314 C~~iglC~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~  392 (478)
T 1qdm_A          314 CSQVGLCTFDGTRGVSAGIRSVVDDEPVKS-NGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGE  392 (478)
T ss_dssp             HHHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSC
T ss_pred             hccccccccCcccccccccccccccccccc-ccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCe
Confidence            999999999999999999999999876554 4668899999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCcEEEEECCEEEeeCccceEEEecCC
Q 011143          429 SAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYADFE  465 (492)
Q Consensus       429 ~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~~~  465 (492)
                      |.|+|+.+.++|+|+|+|+|+.|+|+|++|+++...+
T Consensus       393 ~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~  429 (478)
T 1qdm_A          393 SAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEG  429 (478)
T ss_dssp             CEECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCG
T ss_pred             EEeecccccccccEEEEECCEEEEEChHHhEEEccCC
Confidence            9999999999999999999999999999999997653
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum} Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Back     alignment and structure
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Back     alignment and structure
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A* Back     alignment and structure
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4 Back     alignment and structure
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A Back     alignment and structure
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3 Back     alignment and structure
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A Back     alignment and structure
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1 Back     alignment and structure
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A Back     alignment and structure
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A Back     alignment and structure
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 492
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 7e-74
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 4e-70
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 3e-69
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 9e-69
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-67
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 1e-66
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 3e-66
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-64
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-64
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-61
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-60
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 6e-04
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 4e-60
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 5e-60
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-59
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 9e-55
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-54
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-54
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-53
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-52
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-46
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 5e-40
d1qdma1104 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Horde 2e-39
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-35
d1nkla_78 a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [Tax 4e-14
d1nkla_78 a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [Tax 8e-06
d1of9a_77 a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica 9e-14
d1of9a_77 a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica 8e-04
d2gtga178 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) 1e-13
d2gtga178 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) 2e-07
d1n69a_78 a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [Tax 4e-08
d1n69a_78 a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [Tax 4e-04
d1l9la_74 a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Hom 1e-06
d1l9la_74 a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Hom 0.002
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Plant acid proteinase, phytepsin
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  234 bits (598), Expect = 7e-74
 Identities = 180/245 (73%), Positives = 217/245 (88%)

Query: 73  DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKY 132
           + + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS++CY HS+Y
Sbjct: 1   EEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRY 60

Query: 133 KSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAK 192
           K+  SSTYK+NG  AAIQYGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AK
Sbjct: 61  KAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAK 120

Query: 193 FDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH 252
           FDGILGLGF+EIS+GKA+PVWY M++QGLV +PVFSFWLNR ++  EGGEI+FGG+DP H
Sbjct: 121 FDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKH 180

Query: 253 YKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 312
           Y GEHTYVPVT+KGYWQF+MGDVL+ G++TG+C+ GC AIADSGTSLLAGPT IIT+IN 
Sbjct: 181 YVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINE 240

Query: 313 AIGAS 317
            IGA+
Sbjct: 241 KIGAA 245
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 104 Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 Back     information, alignment and structure
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 Back     information, alignment and structure
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]} Length = 77 Back     information, alignment and structure
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]} Length = 77 Back     information, alignment and structure
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]} Length = 78 Back     information, alignment and structure
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 74 Back     information, alignment and structure
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 74 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.97
d1qdma1104 (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4 99.08
d1of9a_77 Ameobapore A {Entamoeba histolytica [TaxId: 5759]} 96.88
d2gtga178 Saposin C {Human (Homo sapiens) [TaxId: 9606]} 96.85
d1nkla_78 NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} 96.77
d1n69a_78 Saposin B {Human (Homo sapiens) [TaxId: 9606]} 96.73
d1l9la_74 Granulysin, NKG5 protein {Human (Homo sapiens) [Ta 96.03
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=9e-54  Score=439.13  Aligned_cols=322  Identities=40%  Similarity=0.716  Sum_probs=275.2

Q ss_pred             eEEEeeeecCcchhhhcccCcccchhhhcccccccccCC-CCCCCCCcceEeccccCCceEEEEEEEcCCCceEEEEEeC
Q 011143           30 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLH-GSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDT  108 (492)
Q Consensus        30 ~~ripL~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~pl~n~~d~~Y~~~I~IGTP~Q~~~v~lDT  108 (492)
                      ++||||+|+++.|+.+.+.+.+++   +++.+.+....+ ..........+||.|+.|.+|+++|.||||||+|+|++||
T Consensus         1 ~v~ipl~k~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DT   77 (370)
T d3psga_           1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDT   77 (370)
T ss_dssp             CEEEEEEECCCHHHHHHHTTCHHH---HHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEET
T ss_pred             CEEEecccCccHHHHHHHcCcHHH---HHHhcccchhhhhcccccCcccccccccccCCEEEEEEEEcCCCeEEEEEEeC
Confidence            589999999999888777766544   333222211111 1111123446899999999999999999999999999999


Q ss_pred             CCCceeeeCCCCCCCcCCCCCCCCCCCCCCceeECCeeEEEEecCCeeEEEEEEeEeEeeeeeeecceEEEEEecccccc
Q 011143          109 GSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITF  188 (492)
Q Consensus       109 GSs~~WV~s~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~~Yg~Gsv~G~~~~Dtv~lg~~~v~~~~Fg~a~~~~~~~~  188 (492)
                      ||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.|.++.|++.+++.+++++.|+++....+..+
T Consensus        78 GSs~~Wv~~~~C~-~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~  156 (370)
T d3psga_          78 GSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFL  156 (370)
T ss_dssp             TCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGG
T ss_pred             CCCCeEEECccCC-CcccccccccCCCcccccccCCCcEEEEeCCceEEEEEEEEEEeeeceeeeeeEEEEEeeccCcee
Confidence            9999999999997 445677899999999999999999999999999999999999999999999999999987766656


Q ss_pred             cccccceEEeccccccccCccCchhhhhhhcCCCCCCeEEEEecCCCCCCCCeeEEECccCCCCcccccEEEecccccce
Q 011143          189 LAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYW  268 (492)
Q Consensus       189 ~~~~~dGILGLG~~~~s~~~~~~~~~~L~~qg~I~~~~FSl~L~~~~~~~~~G~L~fGgiD~~~y~G~l~~~pv~~~~~w  268 (492)
                      .....+||+|||++..+.....+++++|+++|+|++++||+|+.+..+  .+|.|+|||+|++++.|+++|+|+...++|
T Consensus       157 ~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~--~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w  234 (370)
T d3psga_         157 YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDD--SGSVVLLGGIDSSYYTGSLNWVPVSVEGYW  234 (370)
T ss_dssp             GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTE
T ss_pred             cccccccccccccCcccccCCCchhhhhhhhcccccceeEEEeecCCC--CCceEecCCcCchhcccceeEEeecccceE
Confidence            667889999999998888888899999999999999999999988643  379999999999999999999999999999


Q ss_pred             EEEeeeEEEcCeeeeecCCCceEEEcCCcccccccHHHHHHHHHHhCCCcceecccccccccchhhHHHHHHhhcCcccc
Q 011143          269 QFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKI  348 (492)
Q Consensus       269 ~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~i~a~~~~~~~C~~~~~~fg~~~~~~~~~~~~~~~~  348 (492)
                      .+.++++.++++.+. ...+..++|||||+++++|++++++|.+++++..                              
T Consensus       235 ~v~~~~i~v~g~~~~-~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~------------------------------  283 (370)
T d3psga_         235 QITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE------------------------------  283 (370)
T ss_dssp             EEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE------------------------------
T ss_pred             EEEEeeEEeCCeEEe-cCCCccEEEecCCceEeCCHHHHHHHHHHhCCee------------------------------
Confidence            999999999998875 3567899999999999999999999999998761                              


Q ss_pred             cccccccccCCCcCcccccceeeccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcCCCCCCccc
Q 011143          349 CSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGE  428 (492)
Q Consensus       349 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~  428 (492)
                                                                                                 ...+.
T Consensus       284 ---------------------------------------------------------------------------~~~~~  288 (370)
T d3psga_         284 ---------------------------------------------------------------------------NSDGE  288 (370)
T ss_dssp             ---------------------------------------------------------------------------CTTCC
T ss_pred             ---------------------------------------------------------------------------ecCCc
Confidence                                                                                       13567


Q ss_pred             ccccccccCCCCcEEEEECCEEEeeCccceEEEec
Q 011143          429 SAVDCDNLSSMPNVSFTIGGKVFDLAPNEVWLYAD  463 (492)
Q Consensus       429 ~~~~c~~~~~~p~i~~~~~g~~~~l~~~~y~~~~~  463 (492)
                      +.++|.....+|+|+|+|+|.+|+|+|++|+++.+
T Consensus       289 ~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~~~~  323 (370)
T d3psga_         289 MVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDD  323 (370)
T ss_dssp             EECCGGGGGGCCCEEEEETTEEEEECHHHHEEECS
T ss_pred             EEEeccccCCCceEEEEECCEEEEEChHHeEEEcC
Confidence            88899998899999999999999999999999743
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1qdma1 a.64.1.2 (A:1S-104S) (Pro)phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]} Back     information, alignment and structure
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure