Citrus Sinensis ID: 011165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
Protein Sequence
MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHEccccccccccEEEEccccccccccccccEEEcccEHcEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MGSSEEDPNKLVCFyesssspsqpllikptspipepttpsaasppepdptqflqitynygprpfkdipFIILFILFVISTFGLGIFSICNknqnynnassfiynpssgscvkdslfdnfdYWVFVGFSfsssksnfLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTvssscsdslplVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARlngkivpkesngeykcvwkqdswvpAYFALAILTMLWSLTSMVEAKAYVISGTIAQwyfskedtkpkrsirsslrnafgpssgsiclSGLLICMVRIVRAAVdsarqedvpgFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Flexible Loop (DISEMBL)
MGSSEEDPNKLVCFYesssspsqplLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSlrnafgpssgsICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Low Complexity Region (SEG)
MGSSEEDPNKLVCFYESSSSPSQPLLIKptspipepttpsaasppepdptQFLQITYNYGPRPfkdipfiilfilfvistfGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGfsfsssksnfLKDLIWVLVITLILSVPICFllllllKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRilvlvfvfliigvlvwifvANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPssgsiclsgllicMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Disordered region (IsUnstruct)
***************************************************FLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFS************************ICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKID***
Disordered Region (DISOPRED)
**************************************************************PFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Disordered Region (DISEMBL)
********NKLVCFYE********LLIKPTSPI*************PDPTQFLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Disordered Region (DISPRO)
*******PNKL***Y*******************************PDPTQFLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNLLSKIDFHP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	492	2.2.26 [Sep-21-2011]
Q4I8E9	538	Protein PNS1 OS=Gibberell	yes	no	0.341	0.312	0.284	4e-12
Q54IJ2	548	CTL-like protein DDB_G028	yes	no	0.331	0.297	0.238	6e-10
Q8NCS7	719	Choline transporter-like	yes	no	0.308	0.211	0.231	7e-10
Q95JW2	717	Choline transporter-like	N/A	no	0.345	0.237	0.251	2e-09
Q869R1	555	CTL-like protein DDB_G027	no	no	0.333	0.295	0.269	3e-09
Q8N4M1	653	Choline transporter-like	no	no	0.579	0.436	0.224	9e-09
Q55CN8	506	CTL-like protein DDB_G026	no	no	0.298	0.290	0.280	1e-08
Q6IP59	710	Choline transporter-like	N/A	no	0.315	0.218	0.274	2e-08
B0JZD0	714	Choline transporter-like	yes	no	0.323	0.222	0.261	2e-08
B4F795	705	Choline transporter-like	yes	no	0.317	0.221	0.277	3e-08

>sp|Q4I8E9|PNS1_GIBZE Protein PNS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PNS1 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 8/176 (4%)

Query: 307 ALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSSGSICLS 366
           A     M W    +       I+G    WYF+  +  PK + R+S + A   S GSI L 
Sbjct: 288 AFITFAMYWFSEWLKNTIHTTIAGVYGSWYFNPHNF-PKDATRASAKRALTYSFGSIALG 346

Query: 367 GLLICMVRIVRAAVDSAR-QEDVPG-FVNLILRCCVNALLS----AVDFLNKFTINFAAI 420
            LL+ +++ +R   ++AR QE   G FV   + CC++ LL     AV+F+N++     A+
Sbjct: 347 SLLVAIIQFLRQICNAARNQEGADGSFVGYAIFCCISCLLGLLEWAVEFINRYAFCHIAL 406

Query: 421 TGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLA-GIIFVISAVYTIAVSRLFIS 475
            G+AY ++A+ T++++K   + A+  + +   +L+ G +F+  A   +A   L+ +
Sbjct: 407 YGKAYFAAAKDTWKMIKDRGIDALINDCLIGPVLSFGALFIAYACALLAYLYLYFT 462

Probably involved in transport through the plasma membrane.
Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|Q54IJ2|CTLHA_DICDI CTL-like protein DDB_G0288717 OS=Dictyostelium discoideum GN=DDB_G0288717 PE=3 SV=1

 Score = 66.2 bits (160), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 310 ILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKP----KRSIRSSLRNAFGPSSGSICL 365
           I    W+ + +     + ++G ++ WYFS++ T      + +   SL  A   S GS+  
Sbjct: 296 IFGFFWASSFISAVFQHCVAGVVSNWYFSRDPTGKSLVGQENAYRSLGRALSTSFGSLAF 355

Query: 366 SGLLICMVR----IVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAIT 421
             LLI  +     ++R   +S     +   V   L+C +  + S V ++NKF   + A+ 
Sbjct: 356 GSLLIAFIEFMAFMLRVCKNSNATNKLVVMVVSCLQCILGCIESIVRWINKFGYIYVAMH 415

Query: 422 GEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLL 477
           G ++C+S +  ++L+ RN+ +AV ++      + G++ ++  +   A S LF + L
Sbjct: 416 GHSFCTSTKECFDLISRNMFNAVIMD-----FIGGLVLLLGKILGSAASALFTTAL 466

Dictyostelium discoideum (taxid: 44689)

>sp|Q8NCS7|CTL5_HUMAN Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2 SV=2

 Score = 65.9 bits (159), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 299 DSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFS--KEDTKPKRSIRSSLRNAF 356
             ++P +    +   LW +  ++      ++G  A +Y++  K D  P+  + ++   A 
Sbjct: 450 HQYIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMKKPDDIPRYPLFTAFGRAI 509

Query: 357 GPSSGSICLSGLLICMVRIVRAAVD------SARQEDVPGFVNLILRCCVNALLSAVDFL 410
              +GS+    L+I ++++ +  ++         Q  +  F+   LRCC   L +A+ FL
Sbjct: 510 RYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSKFLQCCLRCCFWCLENAIKFL 569

Query: 411 NKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVS 450
           N+      AI G  +C SA+  + LL RN+L     + V+
Sbjct: 570 NRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVT 609

Homo sapiens (taxid: 9606)

>sp|Q95JW2|CTL5_MACFA Choline transporter-like protein 5 OS=Macaca fascicularis GN=SLC44A5 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 9/179 (5%)

Query: 299 DSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFS--KEDTKPKRSIRSSLRNAF 356
             ++P +    +   LW +  ++      ++G  A +Y++  K D  P+  + ++   A 
Sbjct: 450 HQYIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMKKPDDIPRYPLFTAFGRAI 509

Query: 357 GPSSGSICLSGLLICMVRIVRAAVDS-----ARQED-VPGFVNLILRCCVNALLSAVDFL 410
              +GS+    L+I ++++ +  ++       R E+ +  F+   LRCC   L +A+ FL
Sbjct: 510 RYHTGSLAFGSLIIALIQMFKIVLEYLNHRLKRTENTLSKFLQCCLRCCFWCLENAIKFL 569

Query: 411 NKFTINFAAITGEAYCSSARMTYELLKRNLLS-AVFVETVSTRLLAGIIFVISAVYTIA 468
           N+      AI G  +C SA+  + LL RN+L  AV  E     L  G I V  ++  +A
Sbjct: 570 NRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLFLGKILVAGSIGVLA 628

Macaca fascicularis (taxid: 9541)

>sp|Q869R1|CTLHB_DICDI CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum GN=DDB_G0274487 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 310 ILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTK---PKRSIRSSLRNAFGPSSGSICLS 366
           + T+ W    +       +SG +A WYF         P      S R A   S GSIC  
Sbjct: 323 VFTLYWVFHVIKNTLHTTVSGLLATWYFCSGPNGVGMPHNPTLGSARRALTTSFGSICFG 382

Query: 367 GLLICMVRIVR--AAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEA 424
            L+I ++  +R  + +    +  V   +  I  C ++ L S V F N +     AI G++
Sbjct: 383 SLIISLIETLRYLSQMMINNRNVVVKIIGYIFNCILSMLSSIVQFFNTYAFTHVAIYGKS 442

Query: 425 YCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLYNL 484
           +C SA+ T+ + +  L S +  +           FV +   TIA+  L  SLL   L  L
Sbjct: 443 FCDSAKSTFTMFENRLGSTIINDN----------FVGT---TIAIGGLVASLLLSILGAL 489

Query: 485 LS 486
           +S
Sbjct: 490 IS 491

Dictyostelium discoideum (taxid: 44689)

>sp|Q8N4M1|CTL3_HUMAN Choline transporter-like protein 3 OS=Homo sapiens GN=SLC44A3 PE=2 SV=4

 Score = 62.0 bits (149), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 23/308 (7%)

Query: 149 ILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFI-NVYWFVACTVSSSCSDSLPLVYR 207
           IL++ +   ++   +  T  LV++ +   ++   F+  V W++    ++  S  L     
Sbjct: 220 ILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVCGVLWWLYYDYTNDLSIELDTERE 279

Query: 208 ILVLVFVFLIIG------VLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTL 261
            +  V  F I+       +LV IFV    RI+LTV++  I + A+S    L    PL T 
Sbjct: 280 NMKCVLGFAIVSTGITAVLLVLIFVLR-KRIKLTVELFQITNKAISSAPFLLFQ-PLWTF 337

Query: 262 GLVVYYAP--IVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTS 319
            +++++    + V L         V +    EYK +    S +   ++  ++ ++W+   
Sbjct: 338 AILIFFWVLWVAVLLSLGTAGAAQVMEGGQVEYKPL----SGIRYMWSYHLIGLIWTSEF 393

Query: 320 MVEAKAYVISGTIAQWYFSK-EDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRA 378
           ++  +   I+G +   YF++ ++  P   I SSL   F    G++     LI +VRI R 
Sbjct: 394 ILACQQMTIAGAVVTCYFNRSKNDPPDHPILSSLSILFFYHQGTVVKGSFLISVVRIPRI 453

Query: 379 AV----DSARQEDVPGFVNLILRCCVNALLSAVDFL---NKFTINFAAITGEAYCSSARM 431
            V    ++ +++        + RCC         +L   N+      AI G  +C+SA+ 
Sbjct: 454 IVMYMQNALKEQQHGALSRYLFRCCYCCFWCLDKYLLHLNQNAYTTTAINGTDFCTSAKD 513

Query: 432 TYELLKRN 439
            +++L +N
Sbjct: 514 AFKILSKN 521

Homo sapiens (taxid: 9606)

>sp|Q55CN8|CTLHC_DICDI CTL-like protein DDB_G0269978 OS=Dictyostelium discoideum GN=DDB_G0269978 PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 289 NGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYF-SKED--TKPK 345
           N  Y   W   +W    F   +  + W+   +      V+SG +A WYF + ED    P 
Sbjct: 251 NFYYDSYWT--AWSYMKFMFLVFNLYWTHYVITYTCYSVVSGLVASWYFFADEDFNGMPP 308

Query: 346 RSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLS 405
           +    SL  +   S GSI    LL+C+V++V+       +  VPG  +L   C     L 
Sbjct: 309 KPCAHSLYRSMTSSFGSIAFGSLLVCLVQMVQFICRGFAR--VPGLTSLFCNCLQFIALI 366

Query: 406 AVDFL---NKFTINFAAITGEAYCSSARMTYELLKRN 439
               L   N +T +  +I G+++C+S++ TY L+  N
Sbjct: 367 FTRMLYTFNIYTFSMVSIYGQSFCNSSKKTYNLMVNN 403

Dictyostelium discoideum (taxid: 44689)

>sp|Q6IP59|CTL2_XENLA Choline transporter-like protein 2 OS=Xenopus laevis GN=slc44a2 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 9/164 (5%)

Query: 314 LWSLTSMVEAKAYVISGTIAQWY--FSKEDTKPKRSIRSSLRNAFGPSSGSICLSGLLIC 371
           LW    ++      ++G  A +Y  F K D  P   I SSL  A    +GS+    L++ 
Sbjct: 458 LWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPIFSSLGRALRYHTGSLAFGSLILA 517

Query: 372 MVRIVRAAVD------SARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAY 425
           +V+++R  ++               F+   L+CC   L   + FLN+      AI G  +
Sbjct: 518 IVQMIRILLEYLDHKLKGADNKCARFLLCCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNF 577

Query: 426 CSSARMTYELLKRNLLSAVFVETVSTRLL-AGIIFVISAVYTIA 468
           C+SAR  + LL RN++    ++ V+  LL  G + V+  V  +A
Sbjct: 578 CTSARNAFFLLMRNIIRVAVLDKVTDFLLFLGKLLVVGCVGILA 621

Xenopus laevis (taxid: 8355)

>sp|B0JZD0|CTL5_XENTR Choline transporter-like protein 5 OS=Xenopus tropicalis GN=slc44a5 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)

Query: 310 ILTMLWSLTSMVEAKAYVISGTIAQ--WYFSKEDTKPKRSIRSSLRNAFGPSSGSICLSG 367
           +   LW +   +      ++G  A   W F K    P   + SS   A    +GS+ L  
Sbjct: 456 VFVFLWLVNFSIALGQCTLAGAFASYYWAFKKPADIPACPLFSSFGRAIRYHTGSLALGS 515

Query: 368 LLICMVRIVRAAVD------SARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAIT 421
           L++ +V+ +R  ++       A Q     F+   L+CC   L   + F+N+      AI 
Sbjct: 516 LILALVQFIRIILEYLDHKLKASQNSFAKFILCCLKCCFWCLEKFIKFMNRNAYIMIAIY 575

Query: 422 GEAYCSSARMTYELLKRNLLSAVFVETVSTRLL-AGIIFVISAVYTIA 468
           G+ +C+SA+  + LL RN++    ++ V+  LL  G +FV  +V  +A
Sbjct: 576 GKNFCTSAKDAFFLLMRNVIRVAVLDKVTDFLLFLGKVFVTGSVGVLA 623

Xenopus tropicalis (taxid: 8364)

>sp|B4F795|CTL2_RAT Choline transporter-like protein 2 OS=Rattus norvegicus GN=Slc44a2 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 313 MLWSLTSMVEAKAYV-ISGTIAQWYFS--KEDTKPKRSIRSSLRNAFGPSSGSICLSGLL 369
           M + L + V A   V ++G  A +Y++  K D  P   + S+   A    +GS+    L+
Sbjct: 451 MFFWLANFVLALGQVTLAGAFASYYWAMRKPDDMPAFPLFSAFGRALRYHTGSLAFGSLI 510

Query: 370 ICMVRIVRAAVD------SARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGE 423
           + +V+I+R  ++       A Q     F+ + L+CC   L   + FLN+      AI G 
Sbjct: 511 LAIVQIIRVMLEYLDQRLKAAQNKFAKFLMVCLKCCFWCLEKFIKFLNRNAYIMIAIYGT 570

Query: 424 AYCSSARMTYELLKRNLLSAVFVETVSTRL-LAGIIFVISAVYTIA 468
            +C+SAR  + LL RN++    ++ V+  L L G + ++ +V  +A
Sbjct: 571 NFCTSARNAFFLLMRNIIRVAVLDKVTDFLFLLGKLLIVGSVGILA 616

Choline transporter.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	492
224105185	548	predicted protein [Populus trichocarpa]	0.941	0.844	0.771	0.0
224078236	548	predicted protein [Populus trichocarpa]	0.941	0.844	0.754	0.0
225427989	550	PREDICTED: choline transporter-like prot	0.934	0.836	0.706	0.0
18420278	556	Plasma-membrane choline transporter fami	0.941	0.832	0.684	1e-173
297801934	553	hypothetical protein ARALYDRAFT_327819 [	0.941	0.837	0.675	1e-170
449458596	556	PREDICTED: choline transporter-like prot	0.963	0.852	0.651	1e-162
449489662	556	PREDICTED: choline transporter-like prot	0.963	0.852	0.649	1e-162
356544830	552	PREDICTED: choline transporter-like prot	0.936	0.835	0.641	1e-158
356538628	551	PREDICTED: uncharacterized protein LOC10	0.932	0.833	0.641	1e-152
4467151	523	putative protein [Arabidopsis thaliana]	0.873	0.822	0.621	1e-149

>gi|224105185|ref|XP_002313719.1| predicted protein [Populus trichocarpa] gi|222850127|gb|EEE87674.1| predicted protein [Populus trichocarpa]

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/469 (77%), Positives = 406/469 (86%), Gaps = 6/469 (1%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           MGS EE  NK    Y+SSS  SQPLL+KP S I EP  P     PE DPTQ+LQI+YNYG
Sbjct: 1   MGSGEE-ANKPTSLYDSSSQ-SQPLLLKPPS-IEEPNQPDQ---PESDPTQYLQISYNYG 54

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFD 120
           PRPFKD+PF+I F+  V+ TFG GIFS+ +KN NY+N SS+ Y+ +S SC ++S F+ F 
Sbjct: 55  PRPFKDLPFVIFFVFVVLCTFGFGIFSVFHKNSNYSNLSSYKYDLNSNSCARNSTFNGFY 114

Query: 121 YWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIV 180
              F  ++ SSS S FLK LIW LV+TLILSVPICFLLLL LKHYTKQ+VYV+LPFFV++
Sbjct: 115 ESRFDFYALSSSGSVFLKSLIWTLVVTLILSVPICFLLLLSLKHYTKQIVYVSLPFFVVI 174

Query: 181 PTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIG 240
           P F NVYWFVACTVSSSCSD+ PLVYRILVLVFVFLIIG++VWIFVANWHRIELTV+IIG
Sbjct: 175 PIFFNVYWFVACTVSSSCSDAFPLVYRILVLVFVFLIIGIIVWIFVANWHRIELTVKIIG 234

Query: 241 IASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDS 300
           +ASDALSKNLGLFV +PLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEY+CVWKQDS
Sbjct: 235 VASDALSKNLGLFVVIPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYRCVWKQDS 294

Query: 301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSS 360
           WVPAY+ LAILTMLWSLT MVEA+ YVISGT+AQWYF+KED KP+RSIRSSLR+AFGPSS
Sbjct: 295 WVPAYYTLAILTMLWSLTIMVEAQVYVISGTVAQWYFTKEDAKPRRSIRSSLRHAFGPSS 354

Query: 361 GSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAI 420
           G++CLSGLLIC+VR VRA VDSARQEDVPG VNL+LRCCV ALLSAVDFLNKFTINF AI
Sbjct: 355 GTVCLSGLLICVVRFVRAVVDSARQEDVPGMVNLVLRCCVKALLSAVDFLNKFTINFVAI 414

Query: 421 TGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAV 469
           TGE YC+SARMTYELLKRNLLSAVFVETVSTRLLAGI FV+SA+Y I V
Sbjct: 415 TGEGYCTSARMTYELLKRNLLSAVFVETVSTRLLAGITFVLSAIYAIVV 463

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078236|ref|XP_002305508.1| predicted protein [Populus trichocarpa] gi|222848472|gb|EEE86019.1| predicted protein [Populus trichocarpa]

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/469 (75%), Positives = 402/469 (85%), Gaps = 6/469 (1%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           MGS+++  NK    Y+SSS PSQPLL KP    P    P+    PE DPTQ+LQI+YNYG
Sbjct: 1   MGSAKK-ANKPTSPYDSSS-PSQPLLFKP----PSTEEPNQPDQPESDPTQYLQISYNYG 54

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFD 120
           PRPFKD+PF+ILF+L V+ TFG GIF + +KN NY+N SS+ Y+ +S SCVK S F+ F 
Sbjct: 55  PRPFKDLPFLILFVLVVLCTFGFGIFCVFHKNPNYSNLSSYKYDLNSTSCVKGSNFNGFY 114

Query: 121 YWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIV 180
              F  +  SSS S FLK LIW LV+TLILSVPICFLLLLLLKHYTKQ+VYV+LPFF+++
Sbjct: 115 ESRFDFYVLSSSGSGFLKSLIWTLVVTLILSVPICFLLLLLLKHYTKQIVYVSLPFFIVI 174

Query: 181 PTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQIIG 240
           P F NVYWFVACTVSSSC+D+ PLVYRILV VFVFLIIG++VWIFVANWHRIELTV IIG
Sbjct: 175 PIFFNVYWFVACTVSSSCTDAFPLVYRILVFVFVFLIIGIIVWIFVANWHRIELTVMIIG 234

Query: 241 IASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQDS 300
           +ASDALSKNLGLFV +PLLTLGLV YY PIVVFLVF RLNGKIVPKESNGEY+C WKQDS
Sbjct: 235 VASDALSKNLGLFVVIPLLTLGLVAYYVPIVVFLVFGRLNGKIVPKESNGEYRCAWKQDS 294

Query: 301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPSS 360
           WVPAY+ LAILTMLWSLT +VEA+ YVISGTIAQWYF+ ED+KP+RSIRSSLRNAFGPSS
Sbjct: 295 WVPAYYTLAILTMLWSLTVLVEAQVYVISGTIAQWYFTGEDSKPRRSIRSSLRNAFGPSS 354

Query: 361 GSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINFAAI 420
           G++CLSGLLIC+VR VRA VDSARQED+PG VN +LRCCVNALLSAVDFLNKFTINFAAI
Sbjct: 355 GTVCLSGLLICVVRFVRAVVDSARQEDIPGMVNFVLRCCVNALLSAVDFLNKFTINFAAI 414

Query: 421 TGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAV 469
           TGEAYC+SARMTYELLKRNLLSAVFVETVSTRLLAGI F++S++Y I V
Sbjct: 415 TGEAYCTSARMTYELLKRNLLSAVFVETVSTRLLAGIAFILSSIYAIVV 463

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427989|ref|XP_002277761.1| PREDICTED: choline transporter-like protein 3 [Vitis vinifera] gi|297744628|emb|CBI37890.3| unnamed protein product [Vitis vinifera]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/470 (70%), Positives = 393/470 (83%), Gaps = 10/470 (2%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIK--PTSPIPEPTTPSAASPPEPDPTQFLQITYN 58
           MGSSEE P++    ++SSS P+ PLL K  P+  I EP   S+    EPD TQFLQI+YN
Sbjct: 1   MGSSEE-PDRTSLLHDSSS-PTHPLLSKSYPSPSISEPQPESS----EPDQTQFLQISYN 54

Query: 59  YGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDN 118
           YGPRPFKD+PF+ILF++ V+ TFG GIF++ N+N N ++ SS+ Y+ SS SCVK+S   +
Sbjct: 55  YGPRPFKDLPFLILFLVVVLCTFGFGIFAVVNRNPNSSSVSSYSYDSSSTSCVKNST-AS 113

Query: 119 FDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFV 178
                   +   SS S+FLKDLIW LV+TLILS+P  +LLLL LK+YTKQ+VY +LPFFV
Sbjct: 114 LKQQPISDYLKLSSSSHFLKDLIWTLVVTLILSIPFSWLLLLSLKNYTKQVVYASLPFFV 173

Query: 179 IVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQI 238
           ++P F +VYWFVACTVSSSCS++ PLVYRIL+LVFVFL IGV+VWI VANWHRIELTV I
Sbjct: 174 VMPIFFDVYWFVACTVSSSCSEAFPLVYRILLLVFVFLFIGVIVWIIVANWHRIELTVDI 233

Query: 239 IGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVWKQ 298
           IGIAS +LS+NLGLFV LP LT  LV+YYAPIVVFLVFARLNGKIVP+ES+GEY CVWKQ
Sbjct: 234 IGIASHSLSRNLGLFVVLPCLTFSLVIYYAPIVVFLVFARLNGKIVPRESSGEYYCVWKQ 293

Query: 299 DSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKE-DTKPKRSIRSSLRNAFG 357
           DSWVPAY+ LAILTMLWS T+MVE + YVISGTIAQWYF+K+ D+ PKRSIRSSLRNA G
Sbjct: 294 DSWVPAYYTLAILTMLWSATAMVELQVYVISGTIAQWYFAKDHDSTPKRSIRSSLRNALG 353

Query: 358 PSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTINF 417
           PSSG++CLSGLLIC V +VRAAVDSARQE++ G VNL+LRCCVNALL+A+DFLNKFTINF
Sbjct: 354 PSSGTVCLSGLLICAVHVVRAAVDSARQEELQGIVNLMLRCCVNALLTAIDFLNKFTINF 413

Query: 418 AAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTI 467
           AAITGEAYC+SARMTYELLKRNLLSAVFVETVS+R+L GI+FV SA+Y I
Sbjct: 414 AAITGEAYCTSARMTYELLKRNLLSAVFVETVSSRILGGIVFVFSAIYAI 463

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420278|ref|NP_568045.1| Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gi|16649077|gb|AAL24390.1| putative protein [Arabidopsis thaliana] gi|21387167|gb|AAM47987.1| putative protein [Arabidopsis thaliana] gi|332661557|gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arabidopsis thaliana]

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/475 (68%), Positives = 379/475 (79%), Gaps = 12/475 (2%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           M + + DP K    Y+SSS     L    TS +  P      S PE DPTQFLQI+YN+G
Sbjct: 1   MAADDGDPTKFAAIYDSSSPSHPLLSKPSTSALDSPRR----SDPESDPTQFLQISYNFG 56

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFD 120
           PR FKDIPF++LF L V+STFG GIFSI ++N +Y N+SSF Y+ +S SCVK+S F    
Sbjct: 57  PRTFKDIPFLLLFDLLVLSTFGFGIFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTFTKIS 116

Query: 121 ---YW----VFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVA 173
              YW    V  G   SSS   F KDLIW LV+TLILSVP CF +LLLLKHYTKQ+VY  
Sbjct: 117 DGYYWASSSVMYGM-VSSSDPVFEKDLIWTLVVTLILSVPFCFSVLLLLKHYTKQIVYAC 175

Query: 174 LPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIE 233
           LP FV+ P F NVYWFVACT+SSSCSD+LPL YRILVLVFVFLIIG++VWI VANWHRI+
Sbjct: 176 LPLFVLFPIFFNVYWFVACTLSSSCSDALPLAYRILVLVFVFLIIGIIVWIIVANWHRID 235

Query: 234 LTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYK 293
           LT+QII +ASDALSKNL LFV LPLLTLGLVVYYAPIVVFLVFAR NGK VP+E +G+Y 
Sbjct: 236 LTIQIISVASDALSKNLKLFVVLPLLTLGLVVYYAPIVVFLVFARFNGKFVPRELDGQYF 295

Query: 294 CVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLR 353
           C WK+DSWVPAY+ALAILTM+WSL  MVE + YVISG IAQWYFSKED+ PK+ IRSSLR
Sbjct: 296 CEWKEDSWVPAYYALAILTMIWSLAVMVEMQVYVISGAIAQWYFSKEDSIPKKCIRSSLR 355

Query: 354 NAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKF 413
           NAFG S G+IC+SGLLIC+VR+VRA VD+AR+E+  G VN++LRCC NALL A+D+LNKF
Sbjct: 356 NAFGQSFGTICVSGLLICIVRVVRAIVDNAREENTQGIVNMVLRCCANALLGALDYLNKF 415

Query: 414 TINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIA 468
           TINFAAITGEAYC+SA+MTYELL+RNLLSAVFVETVSTR+L GI+FV+SA Y +A
Sbjct: 416 TINFAAITGEAYCTSAKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAYAVA 470

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801934|ref|XP_002868851.1| hypothetical protein ARALYDRAFT_327819 [Arabidopsis lyrata subsp. lyrata] gi|297314687|gb|EFH45110.1| hypothetical protein ARALYDRAFT_327819 [Arabidopsis lyrata subsp. lyrata]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 319/472 (67%), Positives = 374/472 (79%), Gaps = 9/472 (1%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           M + + DP      Y+SSS     L    TS +  P      S PE DPTQFLQI+YN+G
Sbjct: 1   MAADDGDPTNFAAIYDSSSPSHPLLSKPSTSALDSPRR----SDPESDPTQFLQISYNFG 56

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLF---- 116
           PR FKDIPF++LF L V+STFG GIFS+ ++N +Y ++SSF Y+  S SCVK+S F    
Sbjct: 57  PRTFKDIPFLLLFDLLVLSTFGFGIFSLFHRNSDYGSSSSFTYDFHSSSCVKNSTFTKIS 116

Query: 117 DNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPF 176
           D +   V  G   SSS   F KDLIW LV+TLILS+P CF +LLLLKHYTKQ+VY  LP 
Sbjct: 117 DGYHSSVMYGM-VSSSDPVFEKDLIWTLVVTLILSLPFCFSVLLLLKHYTKQIVYACLPL 175

Query: 177 FVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTV 236
           FV+ P F N+YWFVACT+S+SCSD+LPL YRILVLVFVFLIIG++VWI VANWHRIELT+
Sbjct: 176 FVLFPIFFNLYWFVACTLSASCSDALPLAYRILVLVFVFLIIGIIVWIIVANWHRIELTI 235

Query: 237 QIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVW 296
           QII +ASDALSKNL LFV LPLLTLGLVVYY PIVVFLVFAR NGK VP+E +  Y C W
Sbjct: 236 QIISVASDALSKNLKLFVVLPLLTLGLVVYYVPIVVFLVFARFNGKFVPRELDSHYFCEW 295

Query: 297 KQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAF 356
           K+DSWVPAY+ALAILTMLWSL  MVE + YVISG IAQWYFSKED+ PK+ IRSSLRNAF
Sbjct: 296 KEDSWVPAYYALAILTMLWSLAVMVEMQVYVISGAIAQWYFSKEDSVPKKCIRSSLRNAF 355

Query: 357 GPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTIN 416
           G S G+IC+SGLLIC+VR+VRA VD+AR+E+  G VNL+LRCC NALL A+D+LNKFTIN
Sbjct: 356 GQSFGTICVSGLLICIVRVVRAIVDNAREENPQGIVNLVLRCCANALLGALDYLNKFTIN 415

Query: 417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIA 468
           FAAITGEAYC+SA+MTYELL+RNLLSAVFVETVSTR+L GI+FV+SA Y +A
Sbjct: 416 FAAITGEAYCTSAKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAYAVA 467

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458596|ref|XP_004147033.1| PREDICTED: choline transporter-like protein 1-like [Cucumis sativus]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 320/491 (65%), Positives = 384/491 (78%), Gaps = 17/491 (3%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPT--TPSAASPPEPDPTQFLQITYN 58
           M SSEE       F  SSSS    L   P S  P P+   P  ++P E DP+QFLQI+YN
Sbjct: 1   MASSEEPNKPTSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHSNPHESDPSQFLQISYN 60

Query: 59  YGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCV-KDSLFD 117
           YG RPFKD+P ++LF+LFV+S+FG GIF+  N+N +Y + S + ++  + +CV  +SL  
Sbjct: 61  YGHRPFKDVPILVLFLLFVLSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMTNSLSS 120

Query: 118 NFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFF 177
           +   WV    S  S  S+  K LIW LV+TL+LS+PICFLLLLLLKHYT+Q+VY  LPFF
Sbjct: 121 SSFIWV----SLYSPSSSVFKSLIWTLVVTLVLSLPICFLLLLLLKHYTRQIVYALLPFF 176

Query: 178 VIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQ 237
           V+VP FINVYWFVACTV+ +CS+  P+VYRILVL+F+FL+IGV+VWIF+ NWHRIELT+Q
Sbjct: 177 VLVPIFINVYWFVACTVNPTCSNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIQ 236

Query: 238 IIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKE--SNGEYKCV 295
           IIG+ASDALS NLGLFVA+P +TLGL++YYAPIV+FLVFAR+NGKI+P    S+GEY CV
Sbjct: 237 IIGVASDALSMNLGLFVAIPSMTLGLLIYYAPIVLFLVFARMNGKILPHHHVSSGEYSCV 296

Query: 296 WKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSK-EDTKPKRSIRSSLRN 354
           WK+D WVPAY+ALAILTMLWS   MVE + YVISGTI+QWYFSK ED  P+RSIR SLRN
Sbjct: 297 WKEDKWVPAYYALAILTMLWSGAVMVEGQVYVISGTISQWYFSKEEDDTPRRSIRKSLRN 356

Query: 355 AFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFT 414
           AFGPS+G+ICLSGLLI +VR+VRA VDSARQED+PG  NLILRCCVN  L+AVD+LNKF 
Sbjct: 357 AFGPSAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFLAAVDYLNKFA 416

Query: 415 INFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTI------- 467
           I FAA+TGEAYCSSARMTYELLKRNLLS VFVET+STRLLAGI FV+SA+Y I       
Sbjct: 417 ITFAAVTGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIYAIVACAILH 476

Query: 468 AVSRLFISLLF 478
           AVS L I   F
Sbjct: 477 AVSHLGIDTYF 487

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489662|ref|XP_004158379.1| PREDICTED: choline transporter-like protein 1-like [Cucumis sativus]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 319/491 (64%), Positives = 384/491 (78%), Gaps = 17/491 (3%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPT--TPSAASPPEPDPTQFLQITYN 58
           M SSEE       F  SSSS    L   P S  P P+   P  ++P E DP+QFLQI+YN
Sbjct: 1   MASSEEPNKPTSLFDSSSSSSQPLLSNSPASLFPYPSIDDPPHSNPHESDPSQFLQISYN 60

Query: 59  YGPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCV-KDSLFD 117
           YG RPFKD+P ++LF+LFV+S+FG GIF+  N+N +Y + S + ++  + +CV  +SL  
Sbjct: 61  YGHRPFKDVPILVLFLLFVLSSFGFGIFASFNRNIHYPDLSFYHFDSKTSNCVMTNSLSS 120

Query: 118 NFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFF 177
           +   WV    S  S  S+  K LIW LV+TL+LS+PICFLLLLLLKHYT+Q+VY  LPFF
Sbjct: 121 SSFIWV----SLYSPSSSVFKSLIWTLVVTLVLSLPICFLLLLLLKHYTRQIVYALLPFF 176

Query: 178 VIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTVQ 237
           V+VP FINVYWFVACTV+ +CS+  P+VYRILVL+F+FL+IGV+VWIF+ NWHRIELT+Q
Sbjct: 177 VLVPIFINVYWFVACTVNPTCSNDFPMVYRILVLIFIFLVIGVIVWIFIVNWHRIELTIQ 236

Query: 238 IIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKE--SNGEYKCV 295
           IIG+ASDALS NLGLFVA+P +TLGL++YYAPIV+FLVFAR+NGKI+P    S+GEY CV
Sbjct: 237 IIGVASDALSMNLGLFVAIPSMTLGLLIYYAPIVLFLVFARMNGKILPHHHVSSGEYSCV 296

Query: 296 WKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSK-EDTKPKRSIRSSLRN 354
           WK+D WVPAY+ALAILTMLWS   MVE + YVISGTI+QWYFSK ED  P+RSIR SLRN
Sbjct: 297 WKEDKWVPAYYALAILTMLWSGAVMVEGQVYVISGTISQWYFSKEEDDTPRRSIRKSLRN 356

Query: 355 AFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFT 414
           AFGPS+G+ICLSGLLI +VR+VRA VDSARQED+PG  NLILRCCVN  L+AVD+LNKF 
Sbjct: 357 AFGPSAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFLAAVDYLNKFA 416

Query: 415 INFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTI------- 467
           I FAA+TGEAYC+SARMTYELLKRNLLS VFVET+STRLLAGI FV+SA+Y I       
Sbjct: 417 ITFAAVTGEAYCTSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAIYAIVACAILH 476

Query: 468 AVSRLFISLLF 478
           AVS L I   F
Sbjct: 477 AVSHLGIDTYF 487

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544830|ref|XP_003540850.1| PREDICTED: choline transporter-like protein 1-like [Glycine max]

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/471 (64%), Positives = 368/471 (78%), Gaps = 10/471 (2%)

Query: 1   MGSSEEDPNKLVCF-YESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNY 59
           MGSSE DPN  V F YES +S  QP L KP+ P    +     S       QF  ITYN 
Sbjct: 1   MGSSE-DPNNKVDFPYESPAS--QPFLSKPSYPSSSSSAVEEESESN---QQFHHITYNS 54

Query: 60  GPRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNF 119
           GPR FKD+PF+ILF+LFV+S+F  GIF+I ++N +Y + SSF Y+P++ SCV +    + 
Sbjct: 55  GPRSFKDLPFLILFLLFVLSSFAFGIFAIIHRNNSYPSLSSFTYDPTTTSCVLNPSNSSS 114

Query: 120 DYWVFVGFSFSSSKS---NFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPF 176
              V       ++ S     +K LIW LVIT +LSVP+C+ LLLLLKHYTKQ+VY A+P 
Sbjct: 115 SSSVSTLSLVDTTSSVSPKLVKGLIWTLVITFVLSVPLCWALLLLLKHYTKQIVYAAIPL 174

Query: 177 FVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTV 236
           F+ +P F+NVYWFVACT+ +SCS++ PL YR+L+LVF+FL+IG++VWI V NWHR+ELTV
Sbjct: 175 FIAIPVFLNVYWFVACTLGASCSNAFPLAYRVLILVFLFLVIGIIVWILVVNWHRVELTV 234

Query: 237 QIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVW 296
            IIG+AS ALS+N+ LF  LP L++GLV+Y+ PIVVF+VFAR NGKIV K     Y C W
Sbjct: 235 SIIGVASHALSRNMALFGVLPCLSVGLVLYFVPIVVFMVFARFNGKIVVKNLKSGYDCEW 294

Query: 297 KQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAF 356
           K+DSWVPAY+ALA+LTMLWS  +MVEA+ YVISGTIA WYFSKE   PKRSIR+ LRN F
Sbjct: 295 KEDSWVPAYYALAVLTMLWSAAAMVEAQVYVISGTIANWYFSKEHQTPKRSIRTPLRNVF 354

Query: 357 GPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTIN 416
           GPSSG+ICLSGLL+C+VR+VR+AVDSARQED PG VNL+LRCCVNALL+AVDFLNKFTIN
Sbjct: 355 GPSSGTICLSGLLVCVVRMVRSAVDSARQEDTPGIVNLVLRCCVNALLTAVDFLNKFTIN 414

Query: 417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTI 467
           FAAITGEAYCSSARMTYELL+RNLLSAVFVET+S+R+LAGI+FV SA YTI
Sbjct: 415 FAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTI 465

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538628|ref|XP_003537803.1| PREDICTED: uncharacterized protein LOC100801313 [Glycine max]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 302/471 (64%), Positives = 370/471 (78%), Gaps = 12/471 (2%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           MGSSE+  NK    YES +S  QP L KP+S        S ++       Q+  ITYN G
Sbjct: 2   MGSSEDPNNKGDFPYESPAS--QPFLSKPSSSSSAVEEESESN------QQYHHITYNSG 53

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKD----SLF 116
           PR FKD+PF+ILF+LF++STF  GIFSI ++N NY + SSF ++P++ SCV +    S  
Sbjct: 54  PRSFKDLPFLILFLLFLLSTFAFGIFSIIHRNNNYPSLSSFTFDPTTSSCVLNPSSNSSS 113

Query: 117 DNFDYWVFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPF 176
               +   +  + SS  S  +K LIW LVIT +LSVP+C+ LLLLLKHYTKQ+VY ++PF
Sbjct: 114 SVSTWLSLLQTTSSSPSSKLVKALIWTLVITFVLSVPLCWALLLLLKHYTKQIVYASIPF 173

Query: 177 FVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIELTV 236
           F+ +P F+NVYWFVACT+ +SCS++ PL YR+LV+VFVFL+IG++VWI V NWHR+ELTV
Sbjct: 174 FIAIPIFLNVYWFVACTLGASCSNAFPLAYRVLVMVFVFLVIGIIVWILVVNWHRVELTV 233

Query: 237 QIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYKCVW 296
            IIG+AS ALS+N+ LF  LP LT+GLV+Y+ PIVVF+VFAR NGKIV K     Y C W
Sbjct: 234 SIIGVASHALSRNMALFGVLPCLTVGLVLYFVPIVVFMVFARFNGKIVVKNLKPGYACEW 293

Query: 297 KQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAF 356
           K+DSWVPAY+ALAILT LWS  +MVEA+ YVISGTIA WYFSKE   P+RSIR+ LRNAF
Sbjct: 294 KEDSWVPAYYALAILTTLWSAAAMVEAQVYVISGTIANWYFSKEHQTPRRSIRTPLRNAF 353

Query: 357 GPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTIN 416
           GPSSG+ICLSGLL+C+VR+VR+AVDSARQED PG VNL+L+CCVNALL+AVDFLNKFTIN
Sbjct: 354 GPSSGTICLSGLLVCVVRMVRSAVDSARQEDTPGIVNLVLQCCVNALLTAVDFLNKFTIN 413

Query: 417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTI 467
           FAAITGEAYCSSARMTYELL+RNLLSAVFVET+S+R+LAGI+FV SA YTI
Sbjct: 414 FAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTI 464

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4467151|emb|CAB37520.1| putative protein [Arabidopsis thaliana] gi|7270847|emb|CAB80528.1| putative protein [Arabidopsis thaliana]

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 295/475 (62%), Positives = 347/475 (73%), Gaps = 45/475 (9%)

Query: 1   MGSSEEDPNKLVCFYESSSSPSQPLLIKPTSPIPEPTTPSAASPPEPDPTQFLQITYNYG 60
           M + + DP K    Y+SSS     L    TS +  P      S PE DPTQFLQI+YN+G
Sbjct: 1   MAADDGDPTKFAAIYDSSSPSHPLLSKPSTSALDSPRR----SDPESDPTQFLQISYNFG 56

Query: 61  PRPFKDIPFIILFILFVISTFGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFD 120
           PR FKDIPF++LF L V+STFG GIFSI ++N +Y N+SSF Y+ +S SCVK+S F    
Sbjct: 57  PRTFKDIPFLLLFDLLVLSTFGFGIFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTFTKIS 116

Query: 121 ---YW----VFVGFSFSSSKSNFLKDLIWVLVITLILSVPICFLLLLLLKHYTKQLVYVA 173
              YW    V  G   SSS   F KDLIW LV+TLILSVP CF +LLLLKHYTKQ+VY  
Sbjct: 117 DGYYWASSSVMYGM-VSSSDPVFEKDLIWTLVVTLILSVPFCFSVLLLLKHYTKQIVYAC 175

Query: 174 LPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRILVLVFVFLIIGVLVWIFVANWHRIE 233
           LP FV+ P F NVYWFVACT+SSSCSD+LPL YRILVLVFVFLIIG++VWI VANWHRI+
Sbjct: 176 LPLFVLFPIFFNVYWFVACTLSSSCSDALPLAYRILVLVFVFLIIGIIVWIIVANWHRID 235

Query: 234 LTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYK 293
           LT+QII +ASDALSKNL LFV LPLLTLG                 NGK VP+E +G+Y 
Sbjct: 236 LTIQIISVASDALSKNLKLFVVLPLLTLG----------------FNGKFVPRELDGQYF 279

Query: 294 CVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLR 353
           C WK+DSWVPAY+ALAILTM+WSL  MVE + YVISG IAQWYFSKED+ PK+ IRSSLR
Sbjct: 280 CEWKEDSWVPAYYALAILTMIWSLAVMVEMQVYVISGAIAQWYFSKEDSIPKKCIRSSLR 339

Query: 354 NAFGPSSGSICLSGLLICMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKF 413
           NAFG S G+IC+SGLLIC+VR+VRA VD+AR+E+  G VN++LRCC NALL         
Sbjct: 340 NAFGQSFGTICVSGLLICIVRVVRAIVDNAREENTQGIVNMVLRCCANALL--------- 390

Query: 414 TINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIA 468
                   GEAYC+SA+MTYELL+RNLLSAVFVETVSTR+L GI+FV+SA Y +A
Sbjct: 391 --------GEAYCTSAKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAYAVA 437

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	492
TAIR|locus:2121274	556	AT4G38640 [Arabidopsis thalian	0.941	0.832	0.576	2.4e-138
DICTYBASE|DDB_G0288717	548	DDB_G0288717 [Dictyostelium di	0.359	0.322	0.223	1.5e-08
UNIPROTKB|F1N5M4	677	SLC44A5 "Uncharacterized prote	0.341	0.248	0.242	9.5e-07
UNIPROTKB|A5PK40	649	SLC44A3 "Choline transporter-l	0.414	0.314	0.233	1.9e-06
UNIPROTKB|B7Z473	589	SLC44A5 "cDNA FLJ60667, highly	0.337	0.281	0.240	2.8e-06
UNIPROTKB|Q8NCS7	719	SLC44A5 "Choline transporter-l	0.337	0.230	0.240	3.7e-06
UNIPROTKB|E9PIC5	573	SLC44A3 "Choline transporter-l	0.489	0.420	0.231	9.4e-06
ZFIN|ZDB-GENE-030131-3065	717	slc44a2 "solute carrier family	0.333	0.228	0.225	1e-05
UNIPROTKB|F1P6W3	344	SLC44A5 "Uncharacterized prote	0.341	0.488	0.209	1.1e-05
UNIPROTKB|Q8N4M1	653	SLC44A3 "Choline transporter-l	0.489	0.369	0.231	1.1e-05

TAIR|locus:2121274 AT4G38640 [Arabidopsis thaliana (taxid:3702)]

 Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
 Identities = 274/475 (57%), Positives = 319/475 (67%)

Query:     1 MGSSEEDPNKLVCFYESSSSPSQPLLIKXXXXXXXXXXXXXXXXXXXXXXQFLQITYNYG 60
             M + + DP K    Y+SSS PS PLL K                      QFLQI+YN+G
Sbjct:     1 MAADDGDPTKFAAIYDSSS-PSHPLLSKPSTSALDSPRRSDPESDPT---QFLQISYNFG 56

Query:    61 PRPXXXXXXXXXXXXXXXXXXGLGIFSICNKNQNYNNASSFIYNPSSGSCVKDSLFDNFD 120
             PR                   G GIFSI ++N +Y N+SSF Y+ +S SCVK+S F    
Sbjct:    57 PRTFKDIPFLLLFDLLVLSTFGFGIFSIFHRNNDYGNSSSFTYDFTSSSCVKNSTFTKIS 116

Query:   121 ---YW----VFVGXXXXXXXXXXLKDLIWVLVITLILSVPICFXXXXXXKHYTKQLVYVA 173
                YW    V  G           KDLIW LV+TLILSVP CF      KHYTKQ+VY  
Sbjct:   117 DGYYWASSSVMYGMVSSSDPVFE-KDLIWTLVVTLILSVPFCFSVLLLLKHYTKQIVYAC 175

Query:   174 LPFFVIVPTFINVYWFVACTVSSSCSDSLPLVYRXXXXXXXXXXXXXXXXXXXANWHRIE 233
             LP FV+ P F NVYWFVACT+SSSCSD+LPL YR                   ANWHRI+
Sbjct:   176 LPLFVLFPIFFNVYWFVACTLSSSCSDALPLAYRILVLVFVFLIIGIIVWIIVANWHRID 235

Query:   234 LTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGEYK 293
             LT+QII +ASDALSKNL LFV LPLLTLGLVVYYAPIVVFLVFAR NGK VP+E +G+Y 
Sbjct:   236 LTIQIISVASDALSKNLKLFVVLPLLTLGLVVYYAPIVVFLVFARFNGKFVPRELDGQYF 295

Query:   294 CVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLR 353
             C WK+DSWVPAY+ALAILTM+WSL  MVE + YVISG IAQWYFSKED+ PK+ IRSSLR
Sbjct:   296 CEWKEDSWVPAYYALAILTMIWSLAVMVEMQVYVISGAIAQWYFSKEDSIPKKCIRSSLR 355

Query:   354 NAFGPXXXXXXXXXXXXXMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKF 413
             NAFG              +VR+VRA VD+AR+E+  G VN++LRCC NALL A+D+LNKF
Sbjct:   356 NAFGQSFGTICVSGLLICIVRVVRAIVDNAREENTQGIVNMVLRCCANALLGALDYLNKF 415

Query:   414 TINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIA 468
             TINFAAITGEAYC+SA+MTYELL+RNLLSAVFVETVSTR+L GI+FV+SA Y +A
Sbjct:   416 TINFAAITGEAYCTSAKMTYELLRRNLLSAVFVETVSTRILTGIVFVLSAAYAVA 470

GO:0005634 "nucleus" evidence=ISM

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

DICTYBASE|DDB_G0288717 DDB_G0288717 [Dictyostelium discoideum (taxid:44689)]

 Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 43/192 (22%), Positives = 87/192 (45%)

Query:   305 YFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPK--------RSIRSSLRNAF 356
             YF   I    W+ + +     + ++G ++ WYFS++ T           RS+  +L  +F
Sbjct:   293 YFM--IFGFFWASSFISAVFQHCVAGVVSNWYFSRDPTGKSLVGQENAYRSLGRALSTSF 350

Query:   357 GPXXXXXXXXXXXXXMVRIVRAAVDSARQEDVPGFVNLILRCCVNALLSAVDFLNKFTIN 416
             G              M  ++R   +S     +   V   L+C +  + S V ++NKF   
Sbjct:   351 GSLAFGSLLIAFIEFMAFMLRVCKNSNATNKLVVMVVSCLQCILGCIESIVRWINKFGYI 410

Query:   417 FAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISL 476
             + A+ G ++C+S +  ++L+ RN+ +AV ++      + G++ ++  +   A S LF + 
Sbjct:   411 YVAMHGHSFCTSTKECFDLISRNMFNAVIMD-----FIGGLVLLLGKILGSAASALFTTA 465

Query:   477 LFQFLYNLLSKI 488
             L   +   L+ I
Sbjct:   466 LLYGMGKSLNPI 477

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1N5M4 SLC44A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 145 (56.1 bits), Expect = 9.5e-07, P = 9.5e-07
 Identities = 43/177 (24%), Positives = 77/177 (43%)

Query:   301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFS--KEDTKPKRSIRSSLRNAFGP 358
             ++  +  L +   LW +  ++      ++G  A +Y++  K D  P   + ++   A   
Sbjct:   410 YITTFQLLNLFVFLWLINFVIALGQCALAGAFASYYWALKKPDDIPPYPLFTAFGRAIRY 469

Query:   359 XXXXXXXXXXXXXMV---RIVRAAVDSARQE---DVPGFVNLILRCCVNALLSAVDFLNK 412
                          ++   R++   +D   QE   ++  F+   LRCC   L  AV FLN+
Sbjct:   470 HTGSLAFGSLILAIIQMFRLILEYLDKRLQEAQSNISKFLKCCLRCCFWCLEKAVKFLNR 529

Query:   413 FTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTR-LLAGIIFVISAVYTIA 468
                   AI G+ +C SAR  + LL RN+L    ++ V+   L+ G I V   +  +A
Sbjct:   530 NAYVMMAIYGKNFCKSARDAFNLLMRNILKIAVMDRVTDFVLILGKILVAGCIGVLA 586

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A5PK40 SLC44A3 "Choline transporter-like protein 3" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 51/218 (23%), Positives = 99/218 (45%)

Query:   231 RIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAP--IVVFLVFARLNGKIVPKES 288
             RI+LTV+++ + + A+S +  L    PL T  +++++    + V L         V +  
Sbjct:   308 RIKLTVELLQVTNKAISSSPFLLFQ-PLWTFAILIFFWVLWVAVLLSLGTAGAAQVVEGG 366

Query:   289 NGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPK-RS 347
               EYK +    S +   +   ++ ++W+   ++  +   ++GT+   YF++  + P  R 
Sbjct:   367 QVEYKPL----SGIRYMWWYHLIGLIWTSEFILACQQMAVAGTVVTCYFNRNKSDPPDRP 422

Query:   348 IRSSLRNAFGPXXXXXXXXXXXXXMVRIVRAAV----DSARQED--VPGFVNLILRCCVN 401
             I SSL   F               +VRI RA +    ++ +++D  +   V+    CC  
Sbjct:   423 ILSSLSILFCYHQGTVVKGSFLITVVRIPRAVLMYVYNTLKEKDGALSRCVSQCCCCCFW 482

Query:   402 ALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRN 439
              L   +  LN+      AI G  +C+SA+   +LL +N
Sbjct:   483 CLDKCLRHLNQNAYTTTAINGTDFCTSAKDALKLLSKN 520

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B7Z473 SLC44A5 "cDNA FLJ60667, highly similar to Choline transporter-like protein 5" [Homo sapiens (taxid:9606)]

 Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 43/179 (24%), Positives = 76/179 (42%)

Query:   301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPXX 360
             ++P +    +   LW +  ++      ++G  A +Y++ +  KP    R  L  AFG   
Sbjct:   322 YIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMK--KPDDIPRYPLFTAFGRAI 379

Query:   361 XXXXXXXXXXXMV-------RIVRAAVD---SARQEDVPGFVNLILRCCVNALLSAVDFL 410
                        ++       +IV   +D      Q  +  F+   LRCC   L +A+ FL
Sbjct:   380 RYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSKFLQCCLRCCFWCLENAIKFL 439

Query:   411 NKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLL-AGIIFVISAVYTIA 468
             N+      AI G  +C SA+  + LL RN+L     + V+  +L  G + V  ++  +A
Sbjct:   440 NRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLFLGKLLVAGSIGVLA 498

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8NCS7 SLC44A5 "Choline transporter-like protein 5" [Homo sapiens (taxid:9606)]

 Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 43/179 (24%), Positives = 76/179 (42%)

Query:   301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKEDTKPKRSIRSSLRNAFGPXX 360
             ++P +    +   LW +  ++      ++G  A +Y++ +  KP    R  L  AFG   
Sbjct:   452 YIPTFHVYNLFVFLWLINFVIALGQCALAGAFATYYWAMK--KPDDIPRYPLFTAFGRAI 509

Query:   361 XXXXXXXXXXXMV-------RIVRAAVD---SARQEDVPGFVNLILRCCVNALLSAVDFL 410
                        ++       +IV   +D      Q  +  F+   LRCC   L +A+ FL
Sbjct:   510 RYHTGSLAFGSLIIALIQMFKIVLEYLDHRLKRTQNTLSKFLQCCLRCCFWCLENAIKFL 569

Query:   411 NKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLL-AGIIFVISAVYTIA 468
             N+      AI G  +C SA+  + LL RN+L     + V+  +L  G + V  ++  +A
Sbjct:   570 NRNAYIMIAIYGRNFCRSAKDAFNLLMRNVLKVAVTDEVTYFVLFLGKLLVAGSIGVLA 628

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|E9PIC5 SLC44A3 "Choline transporter-like protein 3" [Homo sapiens (taxid:9606)]

 Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 61/263 (23%), Positives = 113/263 (42%)

Query:   231 RIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAP--IVVFLVFARLNGKIVPKES 288
             RI+LTV++  I + A+S +    +  PL T  +++++    + V L         V +  
Sbjct:   228 RIKLTVELFQITNKAIS-SAPFLLFQPLWTFAILIFFWVLWVAVLLSLGTAGAAQVMEGG 286

Query:   289 NGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSK-EDTKPKRS 347
               EYK +    S +   ++  ++ ++W+   ++  +   I+G +   YF++ ++  P   
Sbjct:   287 QVEYKPL----SGIRYMWSYHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSKNDPPDHP 342

Query:   348 IRSSLRNAFGPXXXXXXXXXXXXXMVRIVRAAV---DSARQEDVPGFVNLIL-RCCVNAL 403
             I SSL   F               +VRI R  V    +A +E   G ++  L RCC    
Sbjct:   343 ILSSLSILFFYHQGTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCF 402

Query:   404 LSAVDFL---NKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFV 460
                  +L   N+      AI G  +C+SA+  +++L +N  S+ F    S       I  
Sbjct:   403 WCLDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKN--SSHFT---SINCFGDFIIF 457

Query:   461 ISAVYTIAVSRLFISLLFQFLYN 483
             +  V  +  + +F  L+  F YN
Sbjct:   458 LGKVLVVCFT-VFGGLM-AFNYN 478

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-3065 slc44a2 "solute carrier family 44, member 2" [Danio rerio (taxid:7955)]

 Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 39/173 (22%), Positives = 72/173 (41%)

Query:   301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWY--FSKEDTKPKRSIRSSLRNAFGP 358
             W+  +    +    W +  ++      ++G  A +Y  F K D  P   I +SL  A   
Sbjct:   443 WLIVFQFYNLFLFFWCVNFVIALGQVTLAGAFASYYWAFKKPDDMPAFPIFNSLGRALRY 502

Query:   359 XXXXXXXXXXXXXMVRIVRAAVD------SARQEDVPGFVNLILRCCVNALLSAVDFLNK 412
                          +V+++R  ++         Q     F+   L+CC   L   + F+N+
Sbjct:   503 HTGTLAFGSLILAIVQVIRVVLEYLDQKLKGAQNKFAKFLLSCLKCCFWCLEKFIKFINR 562

Query:   413 FTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLL-AGIIFVISAV 464
                   AI G+ +C+SAR  + LL RN++    ++ V+  LL  G + ++  V
Sbjct:   563 NAYIMVAIYGKNFCTSARDAFFLLMRNIVRVAVLDKVTDFLLFLGKLLIVGIV 615

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P6W3 SLC44A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 37/177 (20%), Positives = 74/177 (41%)

Query:   301 WVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWY--FSKEDTKPKRSIRSSLRNAFGP 358
             +VP +    +    W +  ++      ++G  A +Y  F K D  P   + ++   A   
Sbjct:    77 YVPTFQMFNLFVFFWLINFVIALGQCALAGAFASYYWAFRKPDDIPPHPLFTAFGRAIRY 136

Query:   359 XXXXXXXXXXXXXMVRIVRAAVD--SAR----QEDVPGFVNLILRCCVNALLSAVDFLNK 412
                          ++++ +  ++    R    Q ++  F+   L+CC   L + + + N+
Sbjct:   137 HTGSLAFGSLLLALIQMFKIVLEYLDRRLKDPQNNISKFLQCCLKCCFWCLENVIKYFNR 196

Query:   413 FTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTR-LLAGIIFVISAVYTIA 468
                   AI G+ +C SAR  + LL RN+L    ++ V+   L+ G I V   +  +A
Sbjct:   197 NAYVMIAIYGKNFCRSARDAFNLLMRNILKIAVMDKVTDFVLILGKILVAGCIGMLA 253

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8N4M1 SLC44A3 "Choline transporter-like protein 3" [Homo sapiens (taxid:9606)]

 Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 61/263 (23%), Positives = 113/263 (42%)

Query:   231 RIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAP--IVVFLVFARLNGKIVPKES 288
             RI+LTV++  I + A+S +    +  PL T  +++++    + V L         V +  
Sbjct:   308 RIKLTVELFQITNKAIS-SAPFLLFQPLWTFAILIFFWVLWVAVLLSLGTAGAAQVMEGG 366

Query:   289 NGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSK-EDTKPKRS 347
               EYK +    S +   ++  ++ ++W+   ++  +   I+G +   YF++ ++  P   
Sbjct:   367 QVEYKPL----SGIRYMWSYHLIGLIWTSEFILACQQMTIAGAVVTCYFNRSKNDPPDHP 422

Query:   348 IRSSLRNAFGPXXXXXXXXXXXXXMVRIVRAAV---DSARQEDVPGFVNLIL-RCCVNAL 403
             I SSL   F               +VRI R  V    +A +E   G ++  L RCC    
Sbjct:   423 ILSSLSILFFYHQGTVVKGSFLISVVRIPRIIVMYMQNALKEQQHGALSRYLFRCCYCCF 482

Query:   404 LSAVDFL---NKFTINFAAITGEAYCSSARMTYELLKRNLLSAVFVETVSTRLLAGIIFV 460
                  +L   N+      AI G  +C+SA+  +++L +N  S+ F    S       I  
Sbjct:   483 WCLDKYLLHLNQNAYTTTAINGTDFCTSAKDAFKILSKN--SSHFT---SINCFGDFIIF 537

Query:   461 ISAVYTIAVSRLFISLLFQFLYN 483
             +  V  +  + +F  L+  F YN
Sbjct:   538 LGKVLVVCFT-VFGGLM-AFNYN 558

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	492
pfam04515	327	pfam04515, Choline_transpo, Plasma-membrane cholin	3e-45

>gnl|CDD|218122 pfam04515, Choline_transpo, Plasma-membrane choline transporter

 Score =  160 bits (408), Expect = 3e-45
 Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 7/265 (2%)

Query: 210 VLVFVFLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAP 269
           V +   ++  +L+ + +    RI L + ++  ASDA+SKN  L +   +  L L  + A 
Sbjct: 2   VAIIFTVLTLILLLLIIFLRKRIPLAIALLKTASDAVSKNPSLLLVPLITFLALAAFIAL 61

Query: 270 IVVFLVFARLNGKIVPKESNGEYKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVIS 329
            +V  V    +G              +K DS +       +  + W+   ++  +   I+
Sbjct: 62  WIVVAVALYTSGDPKYNNGGCPTGGEYKYDSKLIGLLVYLLFGLFWTSEVILAVQHVTIA 121

Query: 330 GTIAQWYFS-KEDTKPKRSIRSSLRNAFGPSSGSICLSGLLICMVRIVRAAVDSARQE-- 386
           G +A WYF+  +   PK    SS + A   S GSIC   L++ +++ +R  ++  R++  
Sbjct: 122 GVVATWYFAGGKRNMPKFPTLSSFKRALTYSFGSICFGSLIVAIIQFIRILLEYLRRKLK 181

Query: 387 ----DVPGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLLS 442
                   F+   L+CC+  L   V++LN+      AI G+ +C+SA+ T+ELLKRN L 
Sbjct: 182 GDQNKFAKFLLCCLKCCLWCLEKFVEYLNRNAYVHIAIYGKGFCTSAKDTWELLKRNGLR 241

Query: 443 AVFVETVSTRLLAGIIFVISAVYTI 467
           A+  + +   +L      +SA+  +
Sbjct: 242 ALVNDGLGGFVLFLGKLFVSALTGL 266

This family represents a high-affinity plasma-membrane choline transporter in C.elegans which is thought to be rate-limiting for ACh synthesis in cholinergic nerve terminals. Length = 327

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	492
KOG1362	577	consensus Choline transporter-like protein [Lipid	100.0
PF04515	334	Choline_transpo: Plasma-membrane choline transport	100.0

>KOG1362 consensus Choline transporter-like protein [Lipid transport and metabolism]

Probab=100.00  E-value=2.4e-56  Score=476.26  Aligned_cols=317  Identities=25%  Similarity=0.412  Sum_probs=257.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH--HHHhccCC--CCCC--hh----hHHHHHH
Q 011165          141 IWVLVITLILSVPICFLLLLLLKHYTKQLVYVALPFFVIVPTFINVYWF--VACTVSSS--CSDS--LP----LVYRILV  210 (492)
Q Consensus       141 ~~~i~~~~~is~~ls~~~l~llr~~a~~lvw~~i~~~~~~~~~~~i~~~--~~~~~~~~--~~~~--~~----~~~~~~~  210 (492)
                      |.++...+.++.++|++++.++|++++.++|..+++++.+++......+  +......+  ....  ..    ....++.
T Consensus       149 w~~i~~~~~~~l~~s~i~~~~lr~~~~~l~~~~~~~~l~~l~~~~~~~~~~y~~~~~~~~~i~~~~~~~~~~~~~~~~l~  228 (577)
T KOG1362|consen  149 WYTILSLLGIALVLSLIFTKLLRFLAAILPWILIILVLVGLLSGIWFCWFLYAILRNTKVTIGFTSSLFVAVGNQLTLLD  228 (577)
T ss_pred             HHHHHhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccceeecchHHHHHHHhHHHHHH
Confidence            8899999999999999999999999999999999988887666543222  22222222  1110  00    1111222


Q ss_pred             -HHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCeeeccC
Q 011165          211 -LVFVFLII-GVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLV-VYYAPIVVFLVFARLNGKIVPKE  287 (492)
Q Consensus       211 -~~i~~~i~-~i~ll~~~~~r~RI~~a~~il~~a~~~l~~~~~lllv~p~~~~~~~-~~~~~w~~~~v~l~~~G~~~~~~  287 (492)
                       .+|+..++ .+.+++++.+|+||+++++++|+|++++.+.|+++ ++|..+++.+ ++++.|+...+++.+.|   ++ 
T Consensus       229 ~~~Iv~~v~~vv~~l~~i~lr~RI~~a~all~ea~k~i~~~p~~~-~~p~~~~~v~~~~i~~wv~~~~~l~t~~---~~-  303 (577)
T KOG1362|consen  229 AVGIVLTVISVVLVLYIIFLRKRIPLAIALLKEATKAIGSLPSTL-FPPALTFFVLLLFISLWVFVALFLVTSG---PN-  303 (577)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-
Confidence             45555444 55777888999999999999999999999999997 5577776654 56788999999998888   22 


Q ss_pred             CCCCcceEECCCCchhHHHHHHHHH-HHHHHHHHhhhhhhhhheeeeEEeecCCC-CCCcchHHHHHHHhhcccchhHHH
Q 011165          288 SNGEYKCVWKQDSWVPAYFALAILT-MLWSLTSMVEAKAYVISGTIAQWYFSKED-TKPKRSIRSSLRNAFGPSSGSICL  365 (492)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~f~-~~W~~~fl~~v~~~tiAg~va~WYF~~~~-~~p~~pv~~s~~ra~~yh~GSi~~  365 (492)
                      .+++..|++..+++ ...++++++. ++|++||+.|++|+++||++++|||++++ +.|..|+..|++|+++||+||+|+
T Consensus       304 ~~gg~~~~~~~~~~-~~~~~~~vv~~l~Wt~~fi~a~q~~vISgava~~Yf~~~~~~iP~~p~~~al~ra~~yhlGSi~~  382 (577)
T KOG1362|consen  304 SEGGCACTYSGGSL-RILFWLLVVGSLIWTSEFILALQQVVISGAVASWYFARDKQDIPSSPLFSALRRALRYHLGSICF  382 (577)
T ss_pred             cCCCceeeccCCcc-hhHhHHHHHHHHHHHHHHHHHHHHHhhhhhhheeeEecCCCCCCCchHHHHHHHHHHHhccchhh
Confidence            12211267776663 3334455555 99999999999999999999999999885 889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCc------chHHHHHHHHHHHHHHHHHHhhchhhhhhHhhcCcchhHhHHHHHHHHHhc
Q 011165          366 SGLLICMVRIVRAAVDSARQEDV------PGFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRN  439 (492)
Q Consensus       366 GSLIvaiv~~lR~il~~~~~~~~------~~~~~~~l~Ccl~cle~~l~~~Nk~Ayi~iAi~G~~F~~SAk~a~~L~~rn  439 (492)
                      |||++++|+++|.++++++++.|      .+++.||++||+||+|++++|+|||||+|+|||||+||+|||+||+|++||
T Consensus       383 GSliv~iV~i~R~iL~~i~~~lk~~~~~~~~~~~~c~~Cc~w~le~~i~~lNrnAYi~iAiyGk~Fc~SAkda~~ll~~N  462 (577)
T KOG1362|consen  383 GSLLVALVRILRVILRYIRHKLKGSQNAAARILLMCLKCCFWCLEKFIKFLNRNAYVMIAIYGKNFCTSAKDAWELLRRN  462 (577)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHhcCcchheeeeccCccchHHHHHHHHHHHHH
Confidence            99999999999999999997644      358999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeehhhhhHHHHHHHHHHHH
Q 011165          440 LLSAVFVETVSTRLLAGIIFVISA  463 (492)
Q Consensus       440 ~~~~~~~d~i~~~iL~g~~~v~s~  463 (492)
                      ..+++..|.++++++++.++++..
T Consensus       463 v~~vv~~d~vs~~llflgk~l~~~  486 (577)
T KOG1362|consen  463 VLRVVDVDLVSDFLLFLGKLLGAI  486 (577)
T ss_pred             HHHHhhhhhhhHHHHHHHHHHHHH
Confidence            999999999999999966666553

>PF04515 Choline_transpo: Plasma-membrane choline transporter; InterPro: IPR007603 This entry represents a family of proteins probably involved in transport through the plasma membrane []

Probab=100.00  E-value=3.8e-50  Score=411.68  Aligned_cols=263  Identities=24%  Similarity=0.476  Sum_probs=231.3

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeeccCCCCC---
Q 011165          215 FLIIGVLVWIFVANWHRIELTVQIIGIASDALSKNLGLFVALPLLTLGLVVYYAPIVVFLVFARLNGKIVPKESNGE---  291 (492)
Q Consensus       215 ~~i~~i~ll~~~~~r~RI~~a~~il~~a~~~l~~~~~lllv~p~~~~~~~~~~~~w~~~~v~l~~~G~~~~~~~~~~---  291 (492)
                      .+++++.++++++.||||+++++++|+|+++++++|++++++++..++.+++.++|+...+++++.|+.+.+..++.   
T Consensus         7 ~i~~~i~~~~~~~~r~rI~~a~~vlk~A~~~l~~~p~l~~~p~~~~~~~~~~~~~w~~~~~~l~~~g~~~~~~~~~~~~~   86 (334)
T PF04515_consen    7 LILALIIILFIIFLRKRIPFAIAVLKVASKALRSNPSLLLVPIITFIVQLVFFVLWIIVVLYLFSIGSPVINPCNLPFSS   86 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCCCccc
Confidence            34445566777889999999999999999999999999977555555566788999999999999998876543221   


Q ss_pred             ---cceEECCCCchhHHHHHHHHHHHHHHHHHhhhhhhhhheeeeEEeecCCC-CCCcchHHHHHHHhhcccchhHHHHH
Q 011165          292 ---YKCVWKQDSWVPAYFALAILTMLWSLTSMVEAKAYVISGTIAQWYFSKED-TKPKRSIRSSLRNAFGPSSGSICLSG  367 (492)
Q Consensus       292 ---~~~~~~~~~~~~~~~~~~~f~~~W~~~fl~~v~~~tiAg~va~WYF~~~~-~~p~~pv~~s~~ra~~yh~GSi~~GS  367 (492)
                         +.++++.+++..++.++++|+++|+++|+++++|+++||++++|||++++ ++|++|+.+|++|+++|||||+|+||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~f~~~W~~~~i~~~~~~~vag~v~~WYF~~~~~~~~~~~~~~s~~~~~~~~~GSi~~gS  166 (334)
T PF04515_consen   87 GSISCCQFVFDSWSYWLIIYHLFSFFWTSQFILNVQQFTVAGVVAQWYFSRDKPNMPKSPVLRSLKRALTYHFGSICFGS  166 (334)
T ss_pred             ccccceeeecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecCCcccccchHHHHHHHHHHHHhHHHHHHHH
Confidence               23677888888888899999999999999999999999999999999987 88999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCc-c-----hHHHHHHHHHHHHHHHHHHhhchhhhhhHhhcCcchhHhHHHHHHHHHhccc
Q 011165          368 LLICMVRIVRAAVDSARQEDV-P-----GFVNLILRCCVNALLSAVDFLNKFTINFAAITGEAYCSSARMTYELLKRNLL  441 (492)
Q Consensus       368 LIvaiv~~lR~il~~~~~~~~-~-----~~~~~~l~Ccl~cle~~l~~~Nk~Ayi~iAi~G~~F~~SAk~a~~L~~rn~~  441 (492)
                      |+++++|++|.++++++++.+ +     +++.||++||++|+|+++||+||+||+++||||++||+|||++++|++||+.
T Consensus       167 livaiv~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~e~~l~~~n~~ayi~~ai~G~~F~~sak~~~~L~~~n~~  246 (334)
T PF04515_consen  167 LIVAIVQFLRFLLRYLRRRAKKSQNKFVKFILCCLSCCLWCLEKFLEYINKYAYIYIAIYGKSFCESAKRAFELIKRNGL  246 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhch
Confidence            999999999999999988754 2     3778999999999999999999999999999999999999999999999999


Q ss_pred             ceeeehhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011165          442 SAVFVETVSTRLLAGIIFVISAVYTIAVSRLFISLLFQFLY  482 (492)
Q Consensus       442 ~~~~~d~i~~~iL~g~~~v~s~~~~~~~~~l~~~~~l~~~~  482 (492)
                      ++..+|++++.+++..++.+++     ++++++|++++.+.
T Consensus       247 ~~~~~~~l~~~~l~~~~~~i~~-----~~~~~~~~~~~~~~  282 (334)
T PF04515_consen  247 RAIIVDGLGSFVLFLGKLFISL-----LCGLIAYLILSNSS  282 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHhccc
Confidence            9999999999999987777774     66777777776543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00