Citrus Sinensis ID: 011209

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-
MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
ccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccccccEEEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEEccccccEEEEcccccccccccHHHHHHHHcccEEEEccccccccEEEcccccccccEEEcccccccccccccEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccEcccccccccccccccccccccccccccccccccccccccccccccEccccEEEccccEEEEEEccccccccccHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccHEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccHHcccHHHHccccccHcHHHccccEHHHHHcccccccccccccHccccc
mgscfsaesrspipgspsspglgirkrkssrkklgsrnpsfdyrreeplhripgrlflngsSEIASLFTqqgkkgtnqDAMIVWENFASradtifcgvfdghgpyghMVAKRvrdslplklsshwevnitsEEVLREISINtagsinsedtsfvsadeeprasadleeteKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGqhlvignvgdsravlgtrdkddSLVAMQLTvdlkpnlpaEAERIRKCKGrvfalhdepevarvwlpnydspglAMARAFGDfclkdfglisvpdisyrrltdkdeFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRrkyptskvddcAVVCLFLdsnsntngistsstFKMKEQLTSVegvnigtekgddpsgpaslprsgtvrttsdeeihpeeseddasklddsntdwsalegvsrvntlltlprftpgkddrkaagark
mgscfsaesrspipgspsspglgirkrkssrkklgsrnpsfdyrreeplhripgRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINtagsinsedtsfVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLtvdlkpnlpaeAERIRKCKGRVfalhdepevarVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarSLVESAVRAWRrkyptskvddcAVVCLFLDsnsntngistsstfkmkeQLTSVEGVNIgtekgddpsgpaslprsgtvrttsdeeihpeeseddaskldDSNTDWSalegvsrvntlltlprftpgkddrkaagark
MGSCFSAEsrspipgspsspglgirkrkssrkklgsrNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarsLVESAVRAWRRKYPTSKVDDCAVVCLFLDsnsntngistsstFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
****************************************************PGRLFLNGSSEIASLFTQ****GTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISIN*******************************PEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA********SLVESAVRAWRRKYPTSKVDDCAVVCLFLD********************************************************************************VSRVNTLLTL*****************
***C********************************************************SSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVL************************************FPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF********************************************************************************EGVSRVNTLLTLPR***************
**************************************PSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSE******************ETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA*************AVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGT****************************************SNTDWSALEGVSRVNTLLTLPRFTPG***********
***********************************************PLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI******************************************FPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDS*************************************************************************W**LEGVSRVNTLLTLPRF**************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query491 2.2.26 [Sep-21-2011]
Q9M8R7492 Probable protein phosphat yes no 0.969 0.967 0.712 0.0
Q9FG61448 Probable protein phosphat no no 0.826 0.906 0.607 1e-150
Q9SA22491 Probable protein phosphat no no 0.861 0.861 0.568 1e-143
Q8RXZ4504 Probable protein phosphat no no 0.938 0.914 0.503 1e-136
Q6ZKL8531 Probable protein phosphat yes no 0.851 0.787 0.546 1e-134
Q2R637432 Probable protein phosphat no no 0.794 0.902 0.552 1e-126
Q6K6N7518 Probable protein phosphat no no 0.828 0.785 0.541 1e-124
Q9LR65462 Probable protein phosphat no no 0.914 0.971 0.502 1e-121
Q8GY60468 Probable protein phosphat no no 0.871 0.914 0.5 1e-119
Q7XW27460 Probable protein phosphat no no 0.670 0.715 0.616 1e-116
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function desciption
 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/497 (71%), Positives = 411/497 (82%), Gaps = 21/497 (4%)

Query: 1   MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNG 60
           MGSC SAESRSP PGSP SP   +RKRK+S+K+ GSRN SFDYRREEPL+++PGR+FLNG
Sbjct: 1   MGSCLSAESRSPRPGSPCSPAFSVRKRKNSKKRPGSRNSSFDYRREEPLNQVPGRMFLNG 60

Query: 61  SSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLK 120
           S+E+A ++TQQGKKG NQDAM+VWENF SR DTIFCGVFDGHGPYGHMVAKRVRD+LPLK
Sbjct: 61  STEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLK 120

Query: 121 LSSHWEVNITSEEVLREISINTAGSINS----EDTS----FVSADEEPRASADLEE--TE 170
           LS++WE  +  E VL+ I+ +T  ++ +    ED +    FV+A+EEPR SAD+EE  TE
Sbjct: 121 LSAYWEAKVPVEGVLKAITTDTVNNVTNINNPEDAAAAAAFVTAEEEPRTSADMEEENTE 180

Query: 171 KFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAV 230
             PE FQTLKESFLKAFKVMDREL+ H ++DCFCSGTTAVTLIKQGQ+LV+GNVGDSRAV
Sbjct: 181 TQPELFQTLKESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAV 240

Query: 231 LGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLA 290
           +GTRD +++LVA+QLTVDLKPNLPAEAERIRKC+GRVFAL DEPEV RVWLPN DSPGLA
Sbjct: 241 MGTRDSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLA 300

Query: 291 MARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARS 350
           MARAFGDFCLKDFGLISVPD+S+R+LT+KDEFIVLATDGIWDVLSNE+VV IVASAP+RS
Sbjct: 301 MARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDVLSNEDVVAIVASAPSRS 360

Query: 351 SAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGV 410
           SAAR+LVESAVRAWR KYPTSKVDDCA VCL+LDS SNTN IST+S+    E     E  
Sbjct: 361 SAARALVESAVRAWRYKYPTSKVDDCAAVCLYLDS-SNTNAISTASSISKLEDGEEEE-- 417

Query: 411 NIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESE-----DDASKLD-DSNTDWSALEG 464
              T + DD SGP+ L RS TVR  S +EI  +ESE      +A  LD +  T++SALEG
Sbjct: 418 LKATTEDDDASGPSGLGRSSTVR--SGKEIALDESETEKLIKEADNLDSEPGTEYSALEG 475

Query: 465 VSRVNTLLTLPRFTPGK 481
           V+RVNTLL LPRF PGK
Sbjct: 476 VARVNTLLNLPRFVPGK 492

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function description
>sp|Q7XW27|P2C38_ORYSJ Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
255547560499 protein phosphatase-2c, putative [Ricinu 0.997 0.981 0.782 0.0
224144954493 predicted protein [Populus trichocarpa] 0.989 0.985 0.777 0.0
224128904482 predicted protein [Populus trichocarpa] 0.967 0.985 0.765 0.0
225430932486 PREDICTED: probable protein phosphatase 0.975 0.985 0.770 0.0
356531890489 PREDICTED: probable protein phosphatase 0.985 0.989 0.726 0.0
297735253461 unnamed protein product [Vitis vinifera] 0.932 0.993 0.752 0.0
356568499487 PREDICTED: probable protein phosphatase 0.983 0.991 0.726 0.0
297832908490 phosphatase 2C family protein [Arabidops 0.971 0.973 0.716 0.0
15232961492 putative protein phosphatase 2C 33 [Arab 0.969 0.967 0.712 0.0
449442279484 PREDICTED: probable protein phosphatase 0.973 0.987 0.722 0.0
>gi|255547560|ref|XP_002514837.1| protein phosphatase-2c, putative [Ricinus communis] gi|223545888|gb|EEF47391.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/497 (78%), Positives = 435/497 (87%), Gaps = 7/497 (1%)

Query: 1   MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNG 60
           MGSC SAESRSP PG+PSSPG G+RK+K+S+K+ GSRN SFDYRREEPLHRIPGRLFLNG
Sbjct: 1   MGSCLSAESRSPRPGTPSSPGFGVRKKKNSKKRPGSRNSSFDYRREEPLHRIPGRLFLNG 60

Query: 61  SSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLK 120
           SS+IASLFTQQG+KGTNQDAMIVWENF SR DT+FCGVFDGHGPYGHMVAKRVRD LPLK
Sbjct: 61  SSDIASLFTQQGRKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVAKRVRDHLPLK 120

Query: 121 LSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLK 180
           LS+HWEVNITSE+VL+EIS+NTAGS+NSEDT+FVSADEE RAS DL++T K PE FQTLK
Sbjct: 121 LSAHWEVNITSEDVLKEISLNTAGSMNSEDTTFVSADEESRASVDLDDTVKHPEIFQTLK 180

Query: 181 ESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSL 240
           ESFLKAFKVMDRELR+HA IDCFCSGTTAVTLIKQG++LV+GNVGDSRAVLGTRDKDDSL
Sbjct: 181 ESFLKAFKVMDRELRIHANIDCFCSGTTAVTLIKQGRNLVVGNVGDSRAVLGTRDKDDSL 240

Query: 241 VAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL 300
           VA+QLTVDLKPNLPAEAERIRKCKGRVFAL DEPEVARVWLPN DSPGLAMARAFGDFCL
Sbjct: 241 VAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCL 300

Query: 301 KDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESA 360
           KDFGLISVPD+S+RRL++KDEFIVLATDGIWDVLSN+EVV+IVAS P R SAAR+LVESA
Sbjct: 301 KDFGLISVPDVSFRRLSEKDEFIVLATDGIWDVLSNKEVVDIVASVPTRPSAARALVESA 360

Query: 361 VRAWRRKYPTSKVDDCAVVCLFLDSN--SNTNGISTSSTFKMKEQLTSVEGVNIGTEKGD 418
           VRAWR KYPTSKVDDCAVVCLFLDSN  S  + ++ +S    KEQ TS +  ++ ++K D
Sbjct: 361 VRAWRYKYPTSKVDDCAVVCLFLDSNNVSTASTVNANSNINTKEQPTSEDQADVDSQKED 420

Query: 419 DPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNT----DWSALEGVSRVNTLLTL 474
           D +GP  L RSGTVR    E +     E+D SK D+  +    +WSALEGVSRVNTLL L
Sbjct: 421 DLNGPTGLGRSGTVR-NGKEVLSDGIGEEDNSKQDEMQSEYGIEWSALEGVSRVNTLLNL 479

Query: 475 PRFTPGKDDRKAAGARK 491
           PRF PGK+D+KAAG  K
Sbjct: 480 PRFVPGKEDKKAAGETK 496

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224144954|ref|XP_002325473.1| predicted protein [Populus trichocarpa] gi|118486776|gb|ABK95223.1| unknown [Populus trichocarpa] gi|222862348|gb|EEE99854.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224128904|ref|XP_002328995.1| predicted protein [Populus trichocarpa] gi|222839229|gb|EEE77580.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225430932|ref|XP_002277393.1| PREDICTED: probable protein phosphatase 2C 33 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356531890|ref|XP_003534509.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|297735253|emb|CBI17615.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568499|ref|XP_003552448.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|297832908|ref|XP_002884336.1| phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata] gi|297330176|gb|EFH60595.1| phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232961|ref|NP_186924.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|79295498|ref|NP_001030624.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|75186497|sp|Q9M8R7.1|P2C33_ARATH RecName: Full=Probable protein phosphatase 2C 33; Short=AtPP2C33; AltName: Full=AtPPC6;1 gi|6728987|gb|AAF26985.1|AC018363_30 putative protein phosphatase-2C (PP2C) [Arabidopsis thaliana] gi|58652052|gb|AAW80851.1| At3g02750 [Arabidopsis thaliana] gi|115311509|gb|ABI93935.1| At3g02750 [Arabidopsis thaliana] gi|332640333|gb|AEE73854.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|332640334|gb|AEE73855.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449442279|ref|XP_004138909.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] gi|449506270|ref|XP_004162700.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query491
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.775 0.850 0.622 1.1e-131
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.749 0.796 0.507 1.2e-123
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.861 0.861 0.550 1.5e-122
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.871 0.849 0.528 2e-118
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.830 0.871 0.505 1.1e-108
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.446 0.587 0.534 3.1e-85
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.480 0.659 0.512 2.5e-83
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.446 0.623 0.513 3.2e-77
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.401 0.595 0.552 6.8e-69
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.505 0.649 0.511 2.6e-63
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1240 (441.6 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
 Identities = 244/392 (62%), Positives = 292/392 (74%)

Query:    40 SFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVF 99
             SFD   E  LHRIPGR+FLNGS++  SLF+QQGKKG NQDAMIVWENF S  DT+FCGVF
Sbjct:    43 SFDNTEEPLLHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVF 102

Query:   100 DGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEE 159
             DGHGPYGH+VAKRVRD LPLKL SH E  ++ EEVL+EIS+NT     SED   +SA+ E
Sbjct:   103 DGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDRKISEDLVHISANGE 162

Query:   160 PRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHL 219
              R     ++  K  +  Q L  S +KA++ MD+EL+M   +DCFCSGTTAVT++KQGQHL
Sbjct:   163 SRVYN--KDYVKDQDMIQMLIGSIVKAYRFMDKELKMQVDVDCFCSGTTAVTMVKQGQHL 220

Query:   220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARV 279
             VIGN+GDSRAVLG R+KD+ LV  QLT DLKP++PAEAERI++C+GR+FAL DEP VAR+
Sbjct:   221 VIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCRGRIFALRDEPGVARL 280

Query:   280 WLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEV 339
             WLPN++SPGLAMARAFGDFCLKDFGLISVPD+SYRRLT+KDEF+VLATDGIWD L+NEEV
Sbjct:   281 WLPNHNSPGLAMARAFGDFCLKDFGLISVPDVSYRRLTEKDEFVVLATDGIWDALTNEEV 340

Query:   340 VEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLDXXXXXXXXXXXXXFK 399
             V+IV            LVE+AVR WR K+PTSKVDDCAVVCLFLD               
Sbjct:   341 VKIVAKAPTRSSAGRALVEAAVRNWRWKFPTSKVDDCAVVCLFLDSEPNRLSTASFS--- 397

Query:   400 MKEQLTSVEGVNIGTEKGDDPSGPASLPRSGT 431
              KE+      +N G  + +  +  +S P SGT
Sbjct:   398 -KEK-----HINNGVTEPEPDTASSSTPDSGT 423
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005634 "nucleus" evidence=IDA
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0006470 "protein dephosphorylation" evidence=IDA
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M8R7P2C33_ARATH3, ., 1, ., 3, ., 1, 60.71220.96940.9674yesno
Q6ZKL8P2C66_ORYSJ3, ., 1, ., 3, ., 1, 60.54680.85130.7871yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIX.1493.1
SubName- Full=Putative uncharacterized protein; (480 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-71
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-56
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 7e-40
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 8e-27
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-19
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-16
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  226 bits (579), Expect = 2e-71
 Identities = 105/325 (32%), Positives = 146/325 (44%), Gaps = 77/325 (23%)

Query: 64  IASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSS 123
            A +  + G + TN+DA+++  N  +  D    GVFDGHG  GH   +     L      
Sbjct: 2   SAGVSDKGGDRKTNEDAVVIKPNL-NNEDGGLFGVFDGHG--GHAAGEFASKLLV----- 53

Query: 124 HWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESF 183
                   EE+L E+                               E      + ++E+ 
Sbjct: 54  --------EELLEELE------------------------------ETLTLSEEDIEEAL 75

Query: 184 LKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLV 241
            KAF   D E+   A    D   SGTTAV  + +G  L + NVGDSRAVL    +     
Sbjct: 76  RKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE----- 130

Query: 242 AMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLK 301
           A+QLT D KP    E ERI K  GRV                     LA+ RA GDF LK
Sbjct: 131 AVQLTKDHKPVNEEERERIEKAGGRVS-------------NGRVPGVLAVTRALGDFDLK 177

Query: 302 DFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSS---AARSLVE 358
             G+ + PD++  +LT+ D+F++LA+DG+WDVLSN+E V+IV S  A+     AA+ LV+
Sbjct: 178 -PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236

Query: 359 SAVRAWRRKYPTSKVDDCAVVCLFL 383
            A+R           D+  VV + L
Sbjct: 237 LALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 491
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.86
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.82
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.79
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.69
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.47
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.31
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.04
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-49  Score=408.21  Aligned_cols=306  Identities=28%  Similarity=0.448  Sum_probs=234.7

Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcccccCccccCCCCCCCCcccCCCCccccCCceeeCCCc-----ceeEeeeccCCCCC
Q 011209            2 GSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSS-----EIASLFTQQGKKGT   76 (491)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~l~~~~~r~~~~g~s-----~~~~~~s~~G~R~~   76 (491)
                      |.|.-...+++..|.|+.|+....+.+..     .++.|+--...+.+...+...|.+...     -.++.+|++|.|..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~   78 (365)
T PLN03145          4 GISGGGEGGSSGGGRPPNPSVAACCKPSL-----VRHSSLVKTPASDISVENELTFENMDTEFIPVVRSGAWADIGSRSS   78 (365)
T ss_pred             cccCCCCCCCcCCCCCCCCcccccccchh-----hcchhhhhccccccccccccccccchhhccCceEEEEEccccCCCC
Confidence            34555566778888888887766443222     122222111111112222221222111     13567899999999


Q ss_pred             CCcceeeecccCC--------CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccc
Q 011209           77 NQDAMIVWENFAS--------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINS  148 (491)
Q Consensus        77 NEDa~~v~~~~~~--------~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (491)
                      |||++++..++..        ..+..|||||||||  |+.+++++++.|+..|......                     
T Consensus        79 nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~---------------------  135 (365)
T PLN03145         79 MEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF---------------------  135 (365)
T ss_pred             CCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc---------------------
Confidence            9999998776531        23468999999999  9999999999999988642110                     


Q ss_pred             cccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCcceEEEEEEeCCeEEEEEeCCc
Q 011209          149 EDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID-CFCSGTTAVTLIKQGQHLVIGNVGDS  227 (491)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d-~~~sGTTavv~li~~~~L~vaNVGDS  227 (491)
                                                 ...+.++|.++|..+++++......+ ...+|||++++++.++.+||+|||||
T Consensus       136 ---------------------------~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDS  188 (365)
T PLN03145        136 ---------------------------PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDC  188 (365)
T ss_pred             ---------------------------chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCc
Confidence                                       02356778889999999886654333 44599999999999999999999999


Q ss_pred             eeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCC----
Q 011209          228 RAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDF----  303 (491)
Q Consensus       228 Ra~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~----  303 (491)
                      ||||+++++     +++||.||+|..+.|++||.+.||.|..       .|+      .+.+++||||||+.+|.+    
T Consensus       189 Rayl~r~g~-----~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g~v------~g~l~vTRalGD~~~k~~k~~~  250 (365)
T PLN03145        189 RAVLCRRGK-----AIEMSRDHKPMCSKERKRIEASGGYVYD-------GYL------NGQLNVARALGDWHMEGMKGSD  250 (365)
T ss_pred             eEEEEcCCe-----EEEecCCCCCCCHHHHHHHHHcCCceec-------ceE------CCcccccccccccccccccccc
Confidence            999999765     8999999999999999999999998853       233      677899999999988754    


Q ss_pred             --CceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHH----cCCCHHHHHHHHHHHHHHhhhhcCCCCCccceE
Q 011209          304 --GLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVA----SAPARSSAARSLVESAVRAWRRKYPTSKVDDCA  377 (491)
Q Consensus       304 --gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~----~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiT  377 (491)
                        +++++|||..++|+++|.|||||||||||+|+++++++++.    ...+++++|+.|++.|+.+       ++.||||
T Consensus       251 ~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-------gs~DNIT  323 (365)
T PLN03145        251 GGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-------KSGDNLA  323 (365)
T ss_pred             CCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-------CCCCCEE
Confidence              48899999999999999999999999999999999877764    3468999999999999998       8999999


Q ss_pred             EEEEEeCCCC
Q 011209          378 VVCLFLDSNS  387 (491)
Q Consensus       378 vIvv~l~~~~  387 (491)
                      ||||+|+..+
T Consensus       324 vIVV~l~~~~  333 (365)
T PLN03145        324 VVVVCFQSQP  333 (365)
T ss_pred             EEEEEeecCC
Confidence            9999999753

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 4e-18
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 4e-18
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 4e-18
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 4e-18
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 4e-18
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 7e-18
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-17
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-17
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 3e-16
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-15
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-15
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-15
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-15
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 6e-14
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 7e-14
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-13
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-13
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-12
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-11
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 2e-05
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 6e-04
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure 
Iteration: 1

 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 121/249 (48%), Gaps = 41/249 (16%)
Query: 95  FCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA-GSINSEDTSF 153
           F GV+DGHG  GH VA   RD L   L+   E+    +E+ +    NT  G     D  F
Sbjct: 70  FFGVYDGHG--GHKVADYCRDRLHFALAE--EIERIKDELCKR---NTGEGRQVQWDKVF 122
Query: 154 VSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLI 213
            S       + D E   K         +  L+A             +     G+TAV  +
Sbjct: 123 TSC----FLTVDGEIEGKIGRAVVGSSDKVLEA-------------VASETVGSTAVVAL 165
Query: 214 KQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDE 273
               H+V+ N GDSRAVL  R K+    AM L+VD KP+   E  RI    G+V     +
Sbjct: 166 VCSSHIVVSNCGDSRAVL-FRGKE----AMPLSVDHKPDREDEYARIENAGGKVI----Q 216
Query: 274 PEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDV 333
            + ARV+        LAM+R+ GD  LK + +I  P++++   + +DE ++LA+DG+WDV
Sbjct: 217 WQGARVF------GVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDV 269
Query: 334 LSNEEVVEI 342
           ++N+EV EI
Sbjct: 270 MNNQEVCEI 278
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query491
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-109
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-71
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-61
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-59
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 9e-58
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-57
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-56
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 6e-54
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 4e-53
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-52
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 8e-51
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-43
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-41
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-15
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 6e-11
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-10
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 6e-10
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-09
3rnr_A211 Stage II sporulation E family protein; structural 2e-07
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  325 bits (835), Expect = e-109
 Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 45/348 (12%)

Query: 47  EPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFA-SRADTIFCGVFDGHGPY 105
            P   +P       + + A++FT  G +   +D   +       R D  F GVFDG    
Sbjct: 7   PPTIHVPLPPTSYPAFD-AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV-- 63

Query: 106 GHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASAD 165
           G   ++ V+D +  +L S                                 +      +D
Sbjct: 64  GDFASENVKDLVVPQLISSPA----------------------------WQEVTEMLRSD 95

Query: 166 LEETEKFPEFFQTLKESFLKAFKVMDRE-LRMHATIDCFCSGTTAVTLIKQGQHLVIGNV 224
           +  TE   +  Q L ++    +K  D E ++M   ++   + +T+VT +     + +G++
Sbjct: 96  VPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHL 155

Query: 225 GDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNY 284
           GDSR  +G     + L    LTVD KP++P E  RI +  G V  LH+      +   ++
Sbjct: 156 GDSRIAMGVET-PNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDF 214

Query: 285 D--------SPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSN 336
                       L  +RAFG   LK +GL + PD+   R+T +   ++LATDG+WDV+S 
Sbjct: 215 SFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSA 274

Query: 337 EEVVEIVASAPAR-SSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFL 383
            + VEI   A     + A++LVE  +   + +  ++  D+   + +F 
Sbjct: 275 AQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSA--DNITAMTVFF 320
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.8
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.78
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.61
3f79_A255 Probable two-component response regulator; adaptor 99.6
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.03
3eq2_A394 Probable two-component response regulator; adaptor 98.17
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
Probab=100.00  E-value=2.8e-47  Score=386.41  Aligned_cols=262  Identities=31%  Similarity=0.472  Sum_probs=219.3

Q ss_pred             cceeEeeeccCCCCCCCcceeeecccCC-------------CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhh
Q 011209           62 SEIASLFTQQGKKGTNQDAMIVWENFAS-------------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVN  128 (491)
Q Consensus        62 s~~~~~~s~~G~R~~NEDa~~v~~~~~~-------------~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~  128 (491)
                      -..+++.|++|+|..|||++++..++..             ..+..||+||||||  |+.+++++++.++..|...+...
T Consensus         8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~G--G~~~~~~as~~~~~~l~~~~~~~   85 (316)
T 3kdj_B            8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALAEEIAKE   85 (316)
T ss_dssp             --CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHHHHhh
Confidence            3467889999999999999999776532             23678999999999  99999999999999998876543


Q ss_pred             cchhHHHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcce
Q 011209          129 ITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTT  208 (491)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTT  208 (491)
                      .....                                     ........+++++.++|..+++++....   ...+|||
T Consensus        86 ~~~~~-------------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT  125 (316)
T 3kdj_B           86 KPMLS-------------------------------------DGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGST  125 (316)
T ss_dssp             CCCGG-------------------------------------GTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEEC
T ss_pred             hcccc-------------------------------------cccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCc
Confidence            22100                                     0112335678899999999999885432   3579999


Q ss_pred             EEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCc
Q 011209          209 AVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPG  288 (491)
Q Consensus       209 avv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~g  288 (491)
                      ++++++.++++|++||||||+|++|+++     +++||.||++..+.|+.||.+.+|.+....    ..|+      .+.
T Consensus       126 ~~~~~i~~~~l~vanvGDSR~yl~r~g~-----~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~----~~r~------~g~  190 (316)
T 3kdj_B          126 SVVAVVFPSHIFVANCGDSRAVLCRGKT-----ALPLSVDHKPDREDEAARIEAAGGKVIQWN----GARV------FGV  190 (316)
T ss_dssp             EEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESS----SEEE------TTT
T ss_pred             EEEEEEECCEEEEEEccCCEEEEEECCE-----ecccCCCCCCCCHHHHHHHHHcCCeEEecC----CceE------cce
Confidence            9999999999999999999999999765     999999999999999999999999886532    2455      788


Q ss_pred             eeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc-----------------------
Q 011209          289 LAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS-----------------------  345 (491)
Q Consensus       289 La~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~-----------------------  345 (491)
                      |++||+|||+.+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..                       
T Consensus       191 l~~sRalGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (316)
T 3kdj_B          191 LAMSRSIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR  269 (316)
T ss_dssp             BSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC---------------
T ss_pred             eccccccCccccCCC-cCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhcccccccccccccccccc
Confidence            999999999999987 99999999999666666999999999999999999999976                       


Q ss_pred             ----CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCCC
Q 011209          346 ----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSN  388 (491)
Q Consensus       346 ----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~  388 (491)
                          ..+++.+|+.|++.|+.+       |+.||||||||+|.....
T Consensus       270 ~~~~~~~~~~aa~~Lv~~A~~~-------g~~DNiTvivv~l~~~~~  309 (316)
T 3kdj_B          270 KEGKDPAAMSAAEYLSKLAIQR-------GSKDNISVVVVDLKPRRK  309 (316)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECSCC--
T ss_pred             ccccCchHHHHHHHHHHHHHHc-------CCCCCeEEEEEEccCCCc
Confidence                245789999999999999       999999999999986644
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 491
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-30
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 5e-13
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 1e-30
 Identities = 72/331 (21%), Positives = 119/331 (35%), Gaps = 83/331 (25%)

Query: 71  QGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI 129
           QG +   +DA        S      F  V+DGH   G  VAK   + L   ++++ +   
Sbjct: 29  QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKG 86

Query: 130 TSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKV 189
           ++                                             + +K      F  
Sbjct: 87  SAGA----------------------------------------PSVENVKNGIRTGFLE 106

Query: 190 MDRELRMHA--TIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTV 247
           +D  +R+ +        SG+TAV ++   QH    N GDSR +L    K         T 
Sbjct: 107 IDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV-----HFFTQ 161

Query: 248 DLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFG--- 304
           D KP+ P E ERI+   G               +    +  LA++RA GDF  K      
Sbjct: 162 DHKPSNPLEKERIQNAGGS-------------VMIQRVNGSLAVSRALGDFDYKCVHGKG 208

Query: 305 -----LISVPDISYRRLT-DKDEFIVLATDGIWDVLSNEEVVEIVASAPARSS----AAR 354
                +   P++     + + D+FI+LA DGIWDV+ NEE+ + V S    +        
Sbjct: 209 PTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCN 268

Query: 355 SLVESAVRAWRRKYPTSKVDDCAVVCLFLDS 385
            +V++ +    R       D+ +V+ +   +
Sbjct: 269 EVVDTCLYKGSR-------DNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query491
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-51  Score=406.05  Aligned_cols=257  Identities=29%  Similarity=0.413  Sum_probs=218.7

Q ss_pred             eeEeeeccCCCCCCCcceeeecccCC-CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccc
Q 011209           64 IASLFTQQGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINT  142 (491)
Q Consensus        64 ~~~~~s~~G~R~~NEDa~~v~~~~~~-~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  142 (491)
                      .+++.+.||+|.+|||++++..++.. .++..|||||||||  |+.+|+++++.|+..|...+......           
T Consensus        22 ~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~-----------   88 (295)
T d1a6qa2          22 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA-----------   88 (295)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS-----------
T ss_pred             EEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhcccc-----------
Confidence            46778999999999999998877643 35678999999999  99999999999999998765433210           


Q ss_pred             cCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc--cccCCCcceEEEEEEeCCeEE
Q 011209          143 AGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHLV  220 (491)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~--~d~~~sGTTavv~li~~~~L~  220 (491)
                                                   .......+.++|.++|..+++.+.....  .....+|||++++++.+++||
T Consensus        89 -----------------------------~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~  139 (295)
T d1a6qa2          89 -----------------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY  139 (295)
T ss_dssp             -----------------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEE
T ss_pred             -----------------------------ccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEE
Confidence                                         1122345778888899999888865433  336679999999999999999


Q ss_pred             EEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccccccc
Q 011209          221 IGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL  300 (491)
Q Consensus       221 vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~l  300 (491)
                      |+||||||+||++++.     +++||.||+|..+.|++||...||.|..       .|+      ++.|++||||||+.+
T Consensus       140 vanvGDSR~~l~~~~~-----~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~  201 (295)
T d1a6qa2         140 FINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDY  201 (295)
T ss_dssp             EEEESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGG
T ss_pred             EEecCCCeEEEeeccc-----ceeeccccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHh
Confidence            9999999999999765     9999999999999999999999998743       344      788999999999999


Q ss_pred             CCCC--------ceecceEEEEEcC-CCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhhhhc
Q 011209          301 KDFG--------LISVPDISYRRLT-DKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRK  367 (491)
Q Consensus       301 K~~g--------v~~~Pdv~~~~L~-~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~  367 (491)
                      |..+        ++++|+|..+.+. ++|+|||||||||||+|+++||+++|..    ..+++.+|+.|++.|+.+    
T Consensus       202 k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~----  277 (295)
T d1a6qa2         202 KCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK----  277 (295)
T ss_dssp             SCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT----
T ss_pred             hhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc----
Confidence            9654        9999999999886 5677999999999999999999999865    468999999999999998    


Q ss_pred             CCCCCccceEEEEEEeCCCC
Q 011209          368 YPTSKVDDCAVVCLFLDSNS  387 (491)
Q Consensus       368 ~~~g~~DNiTvIvv~l~~~~  387 (491)
                         ++.||||||||+|+..+
T Consensus       278 ---gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         278 ---GSRDNMSVILICFPNAP  294 (295)
T ss_dssp             ---TCCSCEEEEEEECTTSC
T ss_pred             ---CCCCCeEEEEEeccCCC
Confidence               88999999999998543
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure