Citrus Sinensis ID: 011252

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS
cHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccEEcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHccccccc
cccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHEcEcccccccEcccccEcccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHcccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccEccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHccccccccccEcccccccccccEcHHHHccccccccccccccccccHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccc
MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILffegqrsgylpqdqrlawrgnsglsdgwtyntdlvggyydagdnvkfnfpmsfTTTLLSWSiiefgdsmppheLRNALVAVRWATDYLLktvsqpnrifvqvgdpnfdhncwerpedmdtertvyavdapnaasdvAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFadsyrgaysdnpnirdgacpfycdfdgyqDELLWGAAWLRRASQDDTYLNYIEMNgktlgadeninefgwdnkhagINVLVSKEVLEANKYTLQSYKASADSFmctlvpesssshidyspggliykpggsnlqhaTTISFLLLVYANYLAktsqsvncgnlyvtpasLRLQAKKQVDYilgsnplglsymvgysnnfpqrihhrgsslpsikdhpqfiackegsiyfnstnpnpnvLVGAvvggpgkddaynddrvdfrksepttyinapFVGVLAYfaanpnps
MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKsepttyinapfvGVLAYFAANPNPS
MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVagetaaalaaasmaFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS
****LQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERP*****ERTVYAVD**************ALAAA**AF****SGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCT***************GLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRG**LPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFA******
***KLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAY*AAN****
MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS
*KKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANP***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKKLQFSFLLSTLLIAAVVGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query490 2.2.26 [Sep-21-2011]
Q93YQ7497 Endoglucanase 24 OS=Arabi yes no 0.957 0.943 0.753 0.0
Q69NF5515 Endoglucanase 23 OS=Oryza yes no 0.957 0.910 0.702 0.0
Q9CAC1492 Endoglucanase 8 OS=Arabid no no 0.983 0.979 0.613 1e-172
Q8GY58493 Endoglucanase 23 OS=Arabi no no 0.979 0.973 0.600 1e-168
O49296489 Endoglucanase 4 OS=Arabid no no 0.971 0.973 0.591 1e-166
Q6Z2J3508 Endoglucanase 6 OS=Oryza no no 0.971 0.937 0.610 1e-164
Q9SVJ4494 Endoglucanase 22 OS=Arabi no no 0.989 0.981 0.581 1e-164
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.973 0.959 0.600 1e-162
O81416516 Endoglucanase 17 OS=Arabi no no 0.938 0.891 0.596 1e-161
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.934 0.914 0.615 1e-160
>sp|Q93YQ7|GUN24_ARATH Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1 Back     alignment and function desciption
 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/470 (75%), Positives = 412/470 (87%), Gaps = 1/470 (0%)

Query: 22  HDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFN 81
           HDY DALSKSILFFEGQRSGYLP DQR+ WR NSGLSDGWT+N DL GGYYDAGDNVKFN
Sbjct: 28  HDYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNIDLTGGYYDAGDNVKFN 87

Query: 82  FPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQ-PNRIFVQVGDPNF 140
           FPM+FTTT+L+WS+IEFG+ MP  ELRN+LVA+RW+++YLLK+VSQ PNRIFVQVGDP  
Sbjct: 88  FPMAFTTTMLAWSVIEFGEFMPSSELRNSLVALRWSSNYLLKSVSQLPNRIFVQVGDPIA 147

Query: 141 DHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAV 200
           DHNCWERPEDMDT RT YAV+APN AS+VAGET AAL+AAS+AFRSSD GY++TLL+NAV
Sbjct: 148 DHNCWERPEDMDTPRTAYAVNAPNPASEVAGETTAALSAASIAFRSSDPGYSQTLLQNAV 207

Query: 201 KAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMN 260
           K FQFAD YRGAYS N +I++  CPFYCDF+G+QDELLWGAAWLR+A+ D++YLNYIE N
Sbjct: 208 KTFQFADMYRGAYSSNDDIKNDVCPFYCDFNGFQDELLWGAAWLRKATGDESYLNYIESN 267

Query: 261 GKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSH 320
            +  GA++N++EFGWDNK  G+NVLVSKEV+E N Y L++YKASA+SFMC+LVPESS  H
Sbjct: 268 REPFGANDNVDEFGWDNKVGGLNVLVSKEVIEGNMYNLEAYKASAESFMCSLVPESSGPH 327

Query: 321 IDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQ 380
           ++Y+  GL+YKPGGS LQHATTISFLLLVYA YL+++S S+NCG L V P  LR  AKKQ
Sbjct: 328 VEYTSAGLLYKPGGSQLQHATTISFLLLVYAQYLSRSSLSLNCGTLTVPPDYLRRLAKKQ 387

Query: 381 VDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPN 440
           VDYILG+NP+GLSYMVGY   +P+RIHHRGSSLPSI DHP+ I CK+GS+YFNST PNPN
Sbjct: 388 VDYILGNNPMGLSYMVGYGERYPKRIHHRGSSLPSIVDHPEAIRCKDGSVYFNSTEPNPN 447

Query: 441 VLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS 490
           VL+GAVVGGPG+DD Y+DDR DFRKSEPTTYINAPFVGVLAYFAANP  S
Sbjct: 448 VLIGAVVGGPGEDDMYDDDRSDFRKSEPTTYINAPFVGVLAYFAANPGSS 497

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q69NF5|GUN23_ORYSJ Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1 Back     alignment and function description
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q8GY58|GUN23_ARATH Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39000 PE=2 SV=2 Back     alignment and function description
>sp|O49296|GUN4_ARATH Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z2J3|GUN6_ORYSJ Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1 Back     alignment and function description
>sp|Q9SVJ4|GUN22_ARATH Endoglucanase 22 OS=Arabidopsis thaliana GN=GH9B16 PE=3 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
254031741496 endo-1,4-beta-glucanase [Dimocarpus long 0.951 0.939 0.896 0.0
347466569496 endo-1,4-beta-glucanase [Populus trichoc 0.953 0.941 0.862 0.0
429326596496 korrigan [Populus tomentosa] 0.957 0.945 0.857 0.0
224077913474 predicted protein [Populus trichocarpa] 0.951 0.983 0.849 0.0
356538698502 PREDICTED: endoglucanase 24 isoform 1 [G 0.995 0.972 0.793 0.0
357467445487 Endo-1 4-beta-glucanase [Medicago trunca 0.957 0.963 0.812 0.0
356509549491 PREDICTED: endoglucanase 24-like [Glycin 0.985 0.983 0.795 0.0
356517881494 PREDICTED: endoglucanase 24-like [Glycin 0.969 0.961 0.802 0.0
356538700502 PREDICTED: endoglucanase 24 isoform 2 [G 0.979 0.956 0.790 0.0
147835849495 hypothetical protein VITISV_044069 [Viti 0.957 0.947 0.823 0.0
>gi|254031741|gb|ACT54548.1| endo-1,4-beta-glucanase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/466 (89%), Positives = 443/466 (95%)

Query: 22  HDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFN 81
           HDY DALSKSILFFEGQRSG+LPQDQRL WR NS LSDGWTYNTDLVGGYYDAGDNVKF 
Sbjct: 28  HDYLDALSKSILFFEGQRSGFLPQDQRLTWRANSALSDGWTYNTDLVGGYYDAGDNVKFG 87

Query: 82  FPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFD 141
           FPM+FTTTLLSWS++EFGDSMP  ELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPN D
Sbjct: 88  FPMAFTTTLLSWSLVEFGDSMPSSELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNVD 147

Query: 142 HNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVK 201
           H+CWERPEDMDT RTVYAVDAPNAASDVAGET AALAAASMAFRSSD GYAETLLR AV+
Sbjct: 148 HSCWERPEDMDTARTVYAVDAPNAASDVAGETVAALAAASMAFRSSDRGYAETLLRTAVR 207

Query: 202 AFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNG 261
            FQFADSYRGAYSDN NIR GACPFYCDFDGYQDELLW AAWLRRASQDDTYLNYIEMNG
Sbjct: 208 VFQFADSYRGAYSDNSNIRGGACPFYCDFDGYQDELLWAAAWLRRASQDDTYLNYIEMNG 267

Query: 262 KTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHI 321
           KTLGADENINEFGWDNKHAGINVLVSKEVLE N+Y+L+SYKASADSFMCTL+PESSSSHI
Sbjct: 268 KTLGADENINEFGWDNKHAGINVLVSKEVLERNQYSLESYKASADSFMCTLIPESSSSHI 327

Query: 322 DYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQV 381
           +Y+PGGLIYKPGGSNLQH+TTISFLLLVYANYLA+TSQSVNCG+L+VTP SLRLQAKKQV
Sbjct: 328 EYTPGGLIYKPGGSNLQHSTTISFLLLVYANYLARTSQSVNCGSLFVTPNSLRLQAKKQV 387

Query: 382 DYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNV 441
           DYILG NP+GLSYMVGY + +P+RIHHRGSSLPSIKDHPQFI+CKEGSIYFNSTNPNPN+
Sbjct: 388 DYILGDNPMGLSYMVGYGDKYPERIHHRGSSLPSIKDHPQFISCKEGSIYFNSTNPNPNL 447

Query: 442 LVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANP 487
           LVGA+VGGPG+DD Y D+RVDFRKSEPTTYINAPFVGVLAYFAANP
Sbjct: 448 LVGAIVGGPGEDDVYVDERVDFRKSEPTTYINAPFVGVLAYFAANP 493

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|347466569|gb|AEO97197.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466623|gb|AEO97224.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326596|gb|AFZ78638.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224077913|ref|XP_002305460.1| predicted protein [Populus trichocarpa] gi|222848424|gb|EEE85971.1| predicted protein [Populus trichocarpa] gi|347466571|gb|AEO97198.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466625|gb|AEO97225.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326598|gb|AFZ78639.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|356538698|ref|XP_003537838.1| PREDICTED: endoglucanase 24 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|357467445|ref|XP_003604007.1| Endo-1 4-beta-glucanase [Medicago truncatula] gi|355493055|gb|AES74258.1| Endo-1 4-beta-glucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356509549|ref|XP_003523510.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|356517881|ref|XP_003527614.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|356538700|ref|XP_003537839.1| PREDICTED: endoglucanase 24 isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|147835849|emb|CAN70805.1| hypothetical protein VITISV_044069 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query490
TAIR|locus:2120242497 GH9B18 "glycosyl hydrolase 9B1 0.957 0.943 0.729 7.8e-197
TAIR|locus:2120232493 GH9B17 "glycosyl hydrolase 9B1 0.979 0.973 0.575 6.1e-158
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.983 0.979 0.588 9.2e-155
TAIR|locus:2028015489 GH9B6 "glycosyl hydrolase 9B6" 0.971 0.973 0.566 8.8e-150
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.934 0.914 0.591 1e-148
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.938 0.891 0.574 1e-148
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.971 0.983 0.538 8e-140
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.963 0.975 0.525 4.7e-135
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.912 0.935 0.489 3.2e-120
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.912 0.933 0.487 4.1e-120
TAIR|locus:2120242 GH9B18 "glycosyl hydrolase 9B18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1906 (676.0 bits), Expect = 7.8e-197, P = 7.8e-197
 Identities = 343/470 (72%), Positives = 399/470 (84%)

Query:    22 HDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFN 81
             HDY DALSKSILFFEGQRSGYLP DQR+ WR NSGLSDGWT+N DL GGYYDAGDNVKFN
Sbjct:    28 HDYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNIDLTGGYYDAGDNVKFN 87

Query:    82 FPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQ-PNRIFVQVGDPNF 140
             FPM+FTTT+L+WS+IEFG+ MP  ELRN+LVA+RW+++YLLK+VSQ PNRIFVQVGDP  
Sbjct:    88 FPMAFTTTMLAWSVIEFGEFMPSSELRNSLVALRWSSNYLLKSVSQLPNRIFVQVGDPIA 147

Query:   141 DHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRNAV 200
             DHNCWERPEDMDT RT YAV+APN AS+V              FRSSD GY++TLL+NAV
Sbjct:   148 DHNCWERPEDMDTPRTAYAVNAPNPASEVAGETTAALSAASIAFRSSDPGYSQTLLQNAV 207

Query:   201 KAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMN 260
             K FQFAD YRGAYS N +I++  CPFYCDF+G+QDELLWGAAWLR+A+ D++YLNYIE N
Sbjct:   208 KTFQFADMYRGAYSSNDDIKNDVCPFYCDFNGFQDELLWGAAWLRKATGDESYLNYIESN 267

Query:   261 GKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSH 320
              +  GA++N++EFGWDNK  G+NVLVSKEV+E N Y L++YKASA+SFMC+LVPESS  H
Sbjct:   268 REPFGANDNVDEFGWDNKVGGLNVLVSKEVIEGNMYNLEAYKASAESFMCSLVPESSGPH 327

Query:   321 IDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQ 380
             ++Y+  GL+YKPGGS LQHATTISFLLLVYA YL+++S S+NCG L V P  LR  AKKQ
Sbjct:   328 VEYTSAGLLYKPGGSQLQHATTISFLLLVYAQYLSRSSLSLNCGTLTVPPDYLRRLAKKQ 387

Query:   381 VDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPN 440
             VDYILG+NP+GLSYMVGY   +P+RIHHRGSSLPSI DHP+ I CK+GS+YFNST PNPN
Sbjct:   388 VDYILGNNPMGLSYMVGYGERYPKRIHHRGSSLPSIVDHPEAIRCKDGSVYFNSTEPNPN 447

Query:   441 VLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS 490
             VL+GAVVGGPG+DD Y+DDR DFRKSEPTTYINAPFVGVLAYFAANP  S
Sbjct:   448 VLIGAVVGGPGEDDMYDDDRSDFRKSEPTTYINAPFVGVLAYFAANPGSS 497
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2120232 GH9B17 "glycosyl hydrolase 9B17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028015 GH9B6 "glycosyl hydrolase 9B6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.57260.97140.9635N/Ano
Q93YQ7GUN24_ARATH3, ., 2, ., 1, ., 40.75310.95710.9436yesno
Q69NF5GUN23_ORYSJ3, ., 2, ., 1, ., 40.70210.95710.9106yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IX.1559.1
annotation not avaliable (476 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
PLN03009495 PLN03009, PLN03009, cellulase 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02175484 PLN02175, PLN02175, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-175
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-168
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-167
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-161
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-161
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information 
 Score =  900 bits (2328), Expect = 0.0
 Identities = 399/469 (85%), Positives = 435/469 (92%)

Query: 22  HDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFN 81
           HDY DALSKSILFFEGQRSGYLP DQR+ WR NSGLSDGWT+NTDL GGYYDAGDNVKF 
Sbjct: 27  HDYSDALSKSILFFEGQRSGYLPNDQRMTWRANSGLSDGWTHNTDLTGGYYDAGDNVKFG 86

Query: 82  FPMSFTTTLLSWSIIEFGDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFD 141
           FPM+FTTT+L+WS+IEFGD MP  ELRN+LVA+RWATDYLLKTVSQPNRIFVQVGDP  D
Sbjct: 87  FPMAFTTTMLAWSVIEFGDLMPSSELRNSLVAIRWATDYLLKTVSQPNRIFVQVGDPIAD 146

Query: 142 HNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAVK 201
           HNCWERPEDMDT RTVYAV+APN ASDVAGETAAALAA+SMAFRSSD GY+ETLLRNA+K
Sbjct: 147 HNCWERPEDMDTPRTVYAVNAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIK 206

Query: 202 AFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMNG 261
            FQFAD YRGAYSDN +I+DG CPFYCDFDGYQDELLWGAAWLRRAS DD+YLNYIE NG
Sbjct: 207 TFQFADMYRGAYSDNDDIKDGVCPFYCDFDGYQDELLWGAAWLRRASGDDSYLNYIENNG 266

Query: 262 KTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHI 321
           +TLGA++NINEFGWDNKHAG+NVLVSKEVLE N Y+LQSYKASADSFMCTL+PESSSSH+
Sbjct: 267 ETLGANDNINEFGWDNKHAGLNVLVSKEVLEGNMYSLQSYKASADSFMCTLIPESSSSHV 326

Query: 322 DYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQV 381
           +Y+PGGLIYKPGGSNLQHATTISFLLLVYANYL+++SQSVNCGNL + P SLR QAK+QV
Sbjct: 327 EYTPGGLIYKPGGSNLQHATTISFLLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQV 386

Query: 382 DYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNV 441
           DYILG NP+GLSYMVGYS  +PQRIHHRGSSLPSIKDHP+ IACKEGS+YFNS+NPNPNV
Sbjct: 387 DYILGDNPMGLSYMVGYSERYPQRIHHRGSSLPSIKDHPEAIACKEGSVYFNSSNPNPNV 446

Query: 442 LVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAANPNPS 490
           LVGAVVGGPG+DD+Y DDR DFRKSEPTTYINAPFVGVLAYFAANP  S
Sbjct: 447 LVGAVVGGPGEDDSYEDDRDDFRKSEPTTYINAPFVGVLAYFAANPGSS 495

Length = 495
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 490
PLN02266510 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02909486 Endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.76
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.51
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 93.68
COG1331667 Highly conserved protein containing a thioredoxin 93.64
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 92.04
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 90.76
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 84.94
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-126  Score=1003.05  Aligned_cols=463  Identities=61%  Similarity=1.078  Sum_probs=430.8

Q ss_pred             cCCChhhhhhhheeeeeccccCCCCccccceeccCCCCCCCCcccccccceeccCCCcccccccchhhhhhhhhhhhhhc
Q 011252           20 VGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFG   99 (490)
Q Consensus        20 ~~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~w~~~~~l~Dg~~~~~dlsGGWyDAGDy~Ky~~~~a~t~~~L~~~~~e~~   99 (490)
                      .+++|.++|++||+||++||||++|+.++++||+++++.||++.++||+|||||||||+||++|+|+|+++|+|+++||+
T Consensus        43 ~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef~  122 (510)
T PLN02266         43 ASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFG  122 (510)
T ss_pred             CcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCcCcccCCCcceeCCCCceecchHHHHHHHHHHHHHhhh
Confidence            35689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhHHHHHHhhhhhhhhcccCCCeEEEEcCCCCCCCCccCCCCCCCCccceeeecCCCCCchhhHHHHHHHHh
Q 011252          100 DSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAA  179 (490)
Q Consensus       100 ~~~~s~~~pdiLde~kwg~D~llkm~~~dg~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~aAalA~  179 (490)
                      +.|+ +++||||||||||+|||||||+++|+||+|||++++||.+|++||+++.+|++|.|+.++|||++++++|||||+
T Consensus       123 ~~~~-~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~Dh~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAa  201 (510)
T PLN02266        123 GLMK-SELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKDHACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAA  201 (510)
T ss_pred             hccc-cccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHH
Confidence            9886 799999999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             cccccccCCchHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCccceecCCCCcchhhhhHhHHHHHhhCCchhHHHHHh
Q 011252          180 ASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEM  259 (490)
Q Consensus       180 as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~~~~~~~g~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~  259 (490)
                      ||||||++||+||++||++||++|+|++++|+.|.+.+  .+..+++|.+.+++.||++|||+|||++|||++|+++++.
T Consensus       202 as~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~--~~~~~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~  279 (510)
T PLN02266        202 ASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGL--KPDVCPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQV  279 (510)
T ss_pred             HHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCC--CcccCCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999987653  2234678887678999999999999999999999999987


Q ss_pred             cCeeccCCCCCccccccccCCcceEEeeHHHHhhhhhhhhhhhhccccceeeccCCCCCCceeecCCceeeccCCCCchh
Q 011252          260 NGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPGGSNLQH  339 (490)
Q Consensus       260 ~~~~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~g~~~~~~~~n~~~  339 (490)
                      ....++.......|+||++..|+++||++....+....++.|++.++.++|.+++++++..+++||+||+|...|+|+||
T Consensus       280 ~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~~~d~~~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrY  359 (510)
T PLN02266        280 NGQILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQY  359 (510)
T ss_pred             HHhhccccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhccCCCCCCccccCCCeeEEeCCCCcHHH
Confidence            66555433335679999999999999987433333445778999999999999888887788999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCeeeccCeeechHHHHHHhhhhcceecCCCCCcceeeeecCCCCCccccccCCCCCCCccC
Q 011252          340 ATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDH  419 (490)
Q Consensus       340 ~~~~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyvtG~G~~~p~~~hHr~s~~~~~~~~  419 (490)
                      +++++||+++|++++.....++.||+.....++|+++|++|||||||+||+++|||||||.|+|++||||.||||++..+
T Consensus       360 a~~~afla~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~  439 (510)
T PLN02266        360 VTSTSFLLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAH  439 (510)
T ss_pred             HHHHHHHHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccccCCCCCCcccC
Confidence            99999999999999987767788998777889999999999999999999999999999999999999999999999999


Q ss_pred             CCceecCCCcccccCCCCCCcceeEeeecCCCCCCCCCCccccccccCCcccccchhHHHHHHhhc
Q 011252          420 PQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAA  485 (490)
Q Consensus       420 ~~~~~c~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~~y~~nEvaid~NA~~~~~la~l~~  485 (490)
                      |.+++|++|+++++++.||||+|.|||||||+.+|+|.|+|.+|++|||||||||+||++||+|..
T Consensus       440 ~~~~~C~~g~~~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~  505 (510)
T PLN02266        440 PAKIQCSQGFSIMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAH  505 (510)
T ss_pred             ccccCCCCCccccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeecchHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999975

>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 1e-77
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 5e-74
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 2e-59
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 2e-59
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 4e-59
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 2e-57
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 5e-47
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 2e-33
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 4e-09
1clc_A639 Three-Dimensional Structure Of Endoglucanase D At 1 6e-05
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 180/467 (38%), Positives = 247/467 (52%), Gaps = 38/467 (8%)
Query: 20  VGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVK 79
           + +DY   L  S+LF+E QRSG LP DQ++ WR +S L+D      DL GGY+DAGD VK
Sbjct: 1   MAYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVK 60
Query: 80  FNFPMSFTTTLLSWSIIEF-GDSMPPHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDP 138
           F FPM++T T+L+W +I+F         L +   AV+WATDY +K  +  N  + QVG  
Sbjct: 61  FGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQG 120
Query: 139 NFDHNCWERPEDMDTERTVYAVDAPNAASDVXXXXXXXXXXXXXXFRSSDSGYAETLLRN 198
           + DH  W RPEDM   R  Y +D     SD+              FR+ D  Y+  LL +
Sbjct: 121 DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTH 180
Query: 199 AVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIE 258
           A + F FA++YRG YSD  +I D A  FY   D Y+DEL+W AAWL RA+ D+TYLN  E
Sbjct: 181 ARQLFDFANNYRGKYSD--SITD-ARNFYASAD-YRDELVWAAAWLYRATNDNTYLNTAE 236
Query: 259 MNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSS 318
                 G         WD+K +G+ VL++K     NK   Q+YK +  S++  L+     
Sbjct: 237 SLYDEFGLQNWGGGLNWDSKVSGVQVLLAKLT---NK---QAYKDTVQSYVNYLINNQQK 290
Query: 319 SHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAK 378
                +P GL+Y      L+HA   +F++L                 L ++ +S R  A+
Sbjct: 291 -----TPKGLLYIDMWGTLRHAANAAFIML-------------EAAELGLSASSYRQFAQ 332
Query: 379 KQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPN 438
            Q+DY LG    G S++ G+ +N P R HHR SS P     P    C   +  FNS +PN
Sbjct: 333 TQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCP-----PAPATCDWNT--FNSPDPN 383
Query: 439 PNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAA 485
            +VL GA+VGGP ++D Y DDR D+  +E  T  NA F   LA   A
Sbjct: 384 YHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9 Angstroms Resolution Length = 639 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query490
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-171
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-169
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-167
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-163
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-160
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-158
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-150
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-142
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-124
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 6e-75
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  489 bits (1260), Expect = e-171
 Identities = 186/467 (39%), Positives = 251/467 (53%), Gaps = 38/467 (8%)

Query: 20  VGHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVK 79
           + +DY   L  S+LF+E QRSG LP DQ++ WR +S L+D      DL GGY+DAGD VK
Sbjct: 1   MAYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVK 60

Query: 80  FNFPMSFTTTLLSWSIIEFGDSMP-PHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDP 138
           F FPM++T T+L+W +I+F         L +   AV+WATDY +K  +  N  + QVG  
Sbjct: 61  FGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQG 120

Query: 139 NFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRN 198
           + DH  W RPEDM   R  Y +D     SD+AGETAAALAAAS+ FR+ D  Y+  LL +
Sbjct: 121 DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTH 180

Query: 199 AVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIE 258
           A + F FA++YRG YSD+      A  FY     Y+DEL+W AAWL RA+ D+TYLN  E
Sbjct: 181 ARQLFDFANNYRGKYSDSI---TDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAE 236

Query: 259 MNGKTLGADENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSS 318
                 G         WD+K +G+ VL++K     NK   Q+YK +  S++  L+     
Sbjct: 237 SLYDEFGLQNWGGGLNWDSKVSGVQVLLAK---LTNK---QAYKDTVQSYVNYLINN--- 287

Query: 319 SHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAK 378
                +P GL+Y      L+HA   +F++L  A                   +S R  A+
Sbjct: 288 --QQKTPKGLLYIDMWGTLRHAANAAFIMLEAAELGLS-------------ASSYRQFAQ 332

Query: 379 KQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPN 438
            Q+DY LG      S++ G+ +N P R HHR SS P                 FNS +PN
Sbjct: 333 TQIDYALGDGG--RSFVCGFGSNPPTRPHHRSSSCPPAPATC-------DWNTFNSPDPN 383

Query: 439 PNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAA 485
            +VL GA+VGGP ++D Y DDR D+  +E  T  NA F   LA   A
Sbjct: 384 YHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.17
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 93.42
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 92.28
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 91.16
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 90.62
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 88.83
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 88.02
3k11_A445 Putative glycosyl hydrolase; structural genomics, 86.63
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 85.09
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 82.4
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=2e-113  Score=906.81  Aligned_cols=436  Identities=36%  Similarity=0.596  Sum_probs=387.7

Q ss_pred             HHHHhcCCChhhhhhhheeeeeccccCCC-CccccceeccCCCCCCCCcccccccceeccCCCcccccccchhhhhhhhh
Q 011252           15 LIAAVVGHDYGDALSKSILFFEGQRSGYL-PQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSW   93 (490)
Q Consensus        15 ~~~~~~~~~Y~~~l~~sl~fy~~QRsG~l-p~~~~~~w~~~~~l~Dg~~~~~dlsGGWyDAGDy~Ky~~~~a~t~~~L~~   93 (490)
                      -++..++++|.++|+++|+||++||||.+ |+.+|+.||++||+.||++.++||+|||||||||+||++|+++|+++|+|
T Consensus        17 ~~~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w   96 (466)
T 2xfg_A           17 QPPATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGW   96 (466)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHH
Confidence            34566889999999999999999999998 99999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCc-hhhhhHHHHHHhhhhhhhhcccCCCeEEEEcCCCCCCCCccCCCCCCCCccceeeecCCCCCchhhHH
Q 011252           94 SIIEFGDSMPP-HELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGE  172 (490)
Q Consensus        94 ~~~e~~~~~~s-~~~pdiLde~kwg~D~llkm~~~dg~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~  172 (490)
                      +++||++.|++ |++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++|.++.++|+|+++++
T Consensus        97 ~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e  176 (466)
T 2xfg_A           97 AVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAE  176 (466)
T ss_dssp             HHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHH
T ss_pred             HHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHH
Confidence            99999999986 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccccccCCchHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCccceecCCCCcchhhhhHhHHHHHhhCCch
Q 011252          173 TAAALAAASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDT  252 (490)
Q Consensus       173 ~aAalA~as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~~~~~~~g~Y~s~~~~~De~~wAA~~Ly~aTg~~~  252 (490)
                      +|||||+||||||++||+||++||++||++|+||++||+.|...     ..+++|+|++++.||++|||+|||++|||++
T Consensus       177 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~-----~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~  251 (466)
T 2xfg_A          177 TSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYT-----AANGFYNSWSGFYDELSWAAVWLYLATNDSS  251 (466)
T ss_dssp             HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCC-----TTTTTSCCSSCSHHHHHHHHHHHHHHHCCHH
T ss_pred             HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCC-----ccccccCCCCCCchHHHHHHHHHHHHhCCHH
Confidence            99999999999999999999999999999999999999988542     3678999988999999999999999999999


Q ss_pred             hHHHHHhcCeeccCC------CCCccccccccCCcceEEeeHHHHhhhh-hhhhhhhhccccceeeccCCCCCCceeecC
Q 011252          253 YLNYIEMNGKTLGAD------ENINEFGWDNKHAGINVLVSKEVLEANK-YTLQSYKASADSFMCTLVPESSSSHIDYSP  325 (490)
Q Consensus       253 Y~~~~~~~~~~~~~~------~~~~~~~Wd~~~~~~~~lla~~~~~~~~-~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp  325 (490)
                      |++++++++..++..      .....|+||++..++++||++.  .+.. ..++.++..++.+++.    .+..++++||
T Consensus       252 Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~tp  325 (466)
T 2xfg_A          252 YLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARI--KNDNGKYKEAIERHLDWWTTG----YNGERITYTP  325 (466)
T ss_dssp             HHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHH--HCSSCHHHHHHHHHHHHHTTC----BTTBCCCBCT
T ss_pred             HHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHhc----cCCCccccCC
Confidence            999999876554321      1235799999999999888762  2322 3345555556655432    2334789999


Q ss_pred             CceeeccCCCCchhHHHHHHHHHHHHHHHhhcCCeeeccCeeechHHHHHHhhhhcceecCCCCCcceeeeecCCCCCcc
Q 011252          326 GGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQR  405 (490)
Q Consensus       326 ~g~~~~~~~~n~~~~~~~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyvtG~G~~~p~~  405 (490)
                      +||.|...|||++++++++||+++|++++.       |+  ...+++|+++|++|||||||+|  ++|||||||+|+|++
T Consensus       326 ~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~  394 (466)
T 2xfg_A          326 KGLAWLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKR  394 (466)
T ss_dssp             TSCBCCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSC
T ss_pred             ccccccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCC
Confidence            999999999999999999999999988642       32  2357899999999999999999  999999999999999


Q ss_pred             ccccCCCCCCCccCCCceecCCCcccccCCCCCCcceeEeeecCCCCCCCCCCccccccccCCcccccchhHHHHHHhhc
Q 011252          406 IHHRGSSLPSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPGKDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAA  485 (490)
Q Consensus       406 ~hHr~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~~y~~nEvaid~NA~~~~~la~l~~  485 (490)
                      ||||.++||..             +.++++.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|.+
T Consensus       395 pHHR~ss~~~~-------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~  461 (466)
T 2xfg_A          395 PHHRTAHGSWA-------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYK  461 (466)
T ss_dssp             CSCHHHHTCSS-------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             CcCchhccCcc-------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHH
Confidence            99999988652             23567889999999999999999999999999999999999999999999999975
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 490
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-165
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-156
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-154
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-147
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-111
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-110
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  473 bits (1219), Expect = e-165
 Identities = 180/472 (38%), Positives = 248/472 (52%), Gaps = 41/472 (8%)

Query: 22  HDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFN 81
            +Y +AL KS+ F+E QRSG LP++ R++WRG+SGL+DG     DL GG+YDAGD+VKF 
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 82  FPMSFTTTLLSWSIIEFGDSMP-PHELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNF 140
           FPM+FT T+L+W  IE  +      ++      +RW  DY +K    PN ++VQVGD + 
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 141 DHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAAASMAFRSSDSGYAETLLRNAV 200
           DH  W   E M  ER  + VD     SDVA ETAAA+AA+S+ F   D  YA TL+++A 
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 201 KAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEMN 260
           + + FAD+YRG YSD       A  FY  + GYQDEL+WGA WL +A+ DD+YL   E  
Sbjct: 184 QLYTFADTYRGVYSDCV----PAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYE 239

Query: 261 GKTLGADENIN------EFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVP 314
              L  ++  +         WD+K  G  VL++KE  +      Q Y   A+ ++     
Sbjct: 240 YDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGK------QKYIDDANRWLDYWTV 293

Query: 315 ESSSSHIDYSPGGLIYKPGGSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLR 374
             +   + YSPGG+        L++A   +F+ LVYA  +             V      
Sbjct: 294 GVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYH 343

Query: 375 LQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSLPSIKDHPQFIACKEGSIYFNS 434
             A +Q++Y LG NP   SY+VG+ NN P+  HHR +                      S
Sbjct: 344 DFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTD-------------SIAS 390

Query: 435 TNPNPNVLVGAVVGGPG-KDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAA 485
              N +VL GA+VGGPG  +DAY DDR D+  +E  T  NA F   LA    
Sbjct: 391 PAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVE 442
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query490
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 86.28
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 83.77
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 80.99
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=2.7e-106  Score=854.58  Aligned_cols=433  Identities=41%  Similarity=0.684  Sum_probs=373.7

Q ss_pred             CCChhhhhhhheeeeeccccCCCCccccceeccCCCCCCCCcccccccceeccCCCcccccccchhhhhhhhhhhhhhcC
Q 011252           21 GHDYGDALSKSILFFEGQRSGYLPQDQRLAWRGNSGLSDGWTYNTDLVGGYYDAGDNVKFNFPMSFTTTLLSWSIIEFGD  100 (490)
Q Consensus        21 ~~~Y~~~l~~sl~fy~~QRsG~lp~~~~~~w~~~~~l~Dg~~~~~dlsGGWyDAGDy~Ky~~~~a~t~~~L~~~~~e~~~  100 (490)
                      +.+|.++|+++|+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++||+
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCc-hhhhhHHHHHHhhhhhhhhcccCCCeEEEEcCCCCCCCCccCCCCCCCCccceeeecCCCCCchhhHHHHHHHHh
Q 011252          101 SMPP-HELRNALVAVRWATDYLLKTVSQPNRIFVQVGDPNFDHNCWERPEDMDTERTVYAVDAPNAASDVAGETAAALAA  179 (490)
Q Consensus       101 ~~~s-~~~pdiLde~kwg~D~llkm~~~dg~~y~qVg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~~~~~aAalA~  179 (490)
                      .|++ |++||||||+|||+|||+|||+++|.||+|||++..||.+|++|+.++.+|+.+.+..++|+|++++++|||||+
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~  162 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAA  162 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHH
Confidence            9987 999999999999999999999999999999999999999999999999999999888888999999999999999


Q ss_pred             cccccccCCchHHHHHHHHHHHHhhhhhcccCCCCCCCCCCCCccceecCCCCcchhhhhHhHHHHHhhCCchhHHHHHh
Q 011252          180 ASMAFRSSDSGYAETLLRNAVKAFQFADSYRGAYSDNPNIRDGACPFYCDFDGYQDELLWGAAWLRRASQDDTYLNYIEM  259 (490)
Q Consensus       180 as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~~~~~~~g~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~  259 (490)
                      |||||+++||+||++||++||++|+|+++||+.|.+..   ..+.++|.+ +++.||++|||+|||++|||++|++++++
T Consensus       163 as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~---~~~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~  238 (460)
T d1tf4a1         163 SSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCV---PAGAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEY  238 (460)
T ss_dssp             HHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTS---TTHHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999987653   223445555 88999999999999999999999999987


Q ss_pred             cCeeccC------CCCCccccccccCCcceEEeeHHHHhhhhhhhhhhhhccccceeeccCCCCCCceeecCCceeeccC
Q 011252          260 NGKTLGA------DENINEFGWDNKHAGINVLVSKEVLEANKYTLQSYKASADSFMCTLVPESSSSHIDYSPGGLIYKPG  333 (490)
Q Consensus       260 ~~~~~~~------~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~tp~g~~~~~~  333 (490)
                      ....+..      ......++|+++..++.+++++..  .    ...+++.++++++.++.+.....++++++++.|...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (460)
T d1tf4a1         239 EYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G----KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDT  312 (460)
T ss_dssp             HGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C----CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCS
T ss_pred             HhhhcccccccccccccccccccchhHHHHHHHHHHh--h----hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCC
Confidence            6543321      112245788888776666665411  1    223334444444333333222356788888888888


Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhcCCeeeccCeeechHHHHHHhhhhcceecCCCCCcceeeeecCCCCCccccccCCCC
Q 011252          334 GSNLQHATTISFLLLVYANYLAKTSQSVNCGNLYVTPASLRLQAKKQVDYILGSNPLGLSYMVGYSNNFPQRIHHRGSSL  413 (490)
Q Consensus       334 ~~n~~~~~~~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~~~SyvtG~G~~~p~~~hHr~s~~  413 (490)
                      ||+.+++.+.++++++++++...          ..++++|+++|++|||||||+||+++|||||+|.|+|++||||.++|
T Consensus       313 WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~  382 (460)
T d1tf4a1         313 WGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHG  382 (460)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccC
Confidence            99999999999999998875431          23568999999999999999999999999999999999999999876


Q ss_pred             CCCccCCCceecCCCcccccCCCCCCcceeEeeecCCC-CCCCCCCccccccccCCcccccchhHHHHHHhhcC
Q 011252          414 PSIKDHPQFIACKEGSIYFNSTNPNPNVLVGAVVGGPG-KDDAYNDDRVDFRKSEPTTYINAPFVGVLAYFAAN  486 (490)
Q Consensus       414 ~~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GalvGGPn-~~d~y~D~~~~y~~nEvaid~NA~~~~~la~l~~~  486 (490)
                      +..             ++...+.|||++|+|+|||||| ++++|+|++++|++|||||||||+||++||+|++.
T Consensus       383 ~~~-------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~  443 (460)
T d1tf4a1         383 SWT-------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE  443 (460)
T ss_dssp             CSS-------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHH
T ss_pred             CCc-------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            542             3456688999999999999999 58999999999999999999999999999999753
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure